mRNA_C-linearis_contig111.1507.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 150 bits (379), Expect = 3.620e-40 Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 1
Query: 4 AVASSSDARHQLESIVKRELDSFKTAPGIGVSWEDKGQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
A ASSS R Q+ESI+ RE+D+FK PG+ VSWE+KGQ VRGKPLEWWRVKAR+YP LA+LARRVLCIPA QAQSERVF++AGLVVTKTR+R+DP
Sbjct: 437 ANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDP 531
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 1.740e-20 Identity = 54/95 (56.84%), Postives = 67/95 (70.53%), Query Frame = 1
Query: 13 SSSDARHQLESIVKRELDSFKTAPGIGVSWEDK-----GQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRL 282
S+ + R QL +IV E+ +FK APGI V W+ + + V PL+ WR K +YP+LAALARRVL IP+SQAQSERVF+TAGL VT TRSRL
Sbjct: 439 SADEKREQLVAIVDMEVSAFKAAPGIRV-WDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRL 532
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 1.920e-17 Identity = 45/85 (52.94%), Postives = 59/85 (69.41%), Query Frame = 1
Query: 37 LESIVKRELDSFKTAPGIGVSWEDK-GQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
+ S V+ EL +FK + GI + EDK G V PL+WWRV+ +P LA LARRVL IPA+QA+SER+F+ AG +VTK R+ L P
Sbjct: 190 ITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAP 274
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.450e-15 Identity = 44/86 (51.16%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 1 GAVASSS------DARHQLESIVKRELDSFKTAPGIGV-SWEDKGQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERV 237
GA ASS+ + R QL S+V E+ SF+T PGI + W G+ V PL+WWR + ++P LAALARRVL IP+SQA SERV
Sbjct: 464 GAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A1A8B204_NOTFU (6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 1 n=2 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8B204_NOTFU) HSP 1 Score: 70.9 bits (172), Expect = 1.220e-13 Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 1
Query: 1 GAVASSSDARHQLESIVKRELDSFKTAPGIGVSWEDKGQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
G V D L +V+ E+ S++ A IGV + P WW+ K+P +A +A+R+LC+P + SER+F+TAG +V+ RSRL P
Sbjct: 24 GEVFKKQDQVKTLAQVVEDEVASYRLAESIGVDAD---------PFRWWKTNEHKFPHVAKVAKRLLCVPGTSVPSERIFSTAGDIVSANRSRLAP 110
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: UPI0007B8209D (zinc finger BED domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=UPI0007B8209D) HSP 1 Score: 70.9 bits (172), Expect = 3.130e-13 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 1
Query: 34 QLESIVKRELDSF--KTAPGIGVSWEDKGQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
Q E+ ++ EL +F +T P + + P +WW+V ++P LA LARR LCIPA+ SERVF+ AGL VT+ RSRL P
Sbjct: 83 QCEAGIEAELQNFLRETPPPLNCT-----------PTDWWKVNGIRFPGLAKLARRYLCIPATSVPSERVFSAAGLTVTRLRSRLTP 158
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A8C9WTI1_SANLU (Uncharacterized protein n=1 Tax=Sander lucioperca TaxID=283035 RepID=A0A8C9WTI1_SANLU) HSP 1 Score: 71.6 bits (174), Expect = 1.720e-12 Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 46 IVKRELDSFKTAPGIGVSWEDKGQLVRGKPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
I+K E+ S+ TA GI V G PL WW++ KYP +A +AR L +P S SERVF+TAG +VT RS L P
Sbjct: 515 IIKEEVASYLTASGITVD---------GDPLTWWKINESKYPDIAKMARCYLAVPGSSVPSERVFSTAGDIVTAKRSTLSP 586
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: UPI00148F4C44 (zinc finger BED domain-containing protein 1-like n=1 Tax=Notolabrus celidotus TaxID=1203425 RepID=UPI00148F4C44) HSP 1 Score: 70.1 bits (170), Expect = 1.820e-12 Identity = 30/53 (56.60%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 130 KPLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
+P +WW+V A ++P LA LAR+ LCIPA+ SERVF++AGL+V++ RSRL P
Sbjct: 171 QPTDWWKVNAGRFPRLAKLARQYLCIPATSVPSERVFSSAGLIVSRLRSRLTP 223
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A1A8CIX7_9TELE (Dimer_Tnp_hAT domain-containing protein (Fragment) n=1 Tax=Nothobranchius kadleci TaxID=1051664 RepID=A0A1A8CIX7_9TELE) HSP 1 Score: 66.6 bits (161), Expect = 2.070e-12 Identity = 30/52 (57.69%), Postives = 39/52 (75.00%), Query Frame = 1
Query: 133 PLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
PLEWW+V A YP+LA+LA+ LCIPA+ SERVF+TAG +V+ RS + P
Sbjct: 23 PLEWWKVNAYAYPILASLAKAYLCIPATSVPSERVFSTAGDIVSAQRSLITP 74
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Match: A0A3N0XFY2_ANAGA (Zinc finger BED domain-containing protein 1 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XFY2_ANAGA) HSP 1 Score: 70.5 bits (171), Expect = 4.100e-12 Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 1
Query: 133 PLEWWRVKARKYPMLAALARRVLCIPASQAQSERVFATAGLVVTKTRSRLDP 288
PLEWW+ R++P LA LARR LCIP + SERVF+ AGL V + RSRL P
Sbjct: 333 PLEWWKANERRFPRLATLARRYLCIPGTSVPSERVFSAAGLTVNRLRSRLTP 384 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig111.1507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig111.1507.1 >prot_C-linearis_contig111.1507.1 ID=prot_C-linearis_contig111.1507.1|Name=mRNA_C-linearis_contig111.1507.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=97bp GAVASSSDARHQLESIVKRELDSFKTAPGIGVSWEDKGQLVRGKPLEWWRback to top mRNA from alignment at C-linearis_contig111:481143..481433- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig111.1507.1 ID=mRNA_C-linearis_contig111.1507.1|Name=mRNA_C-linearis_contig111.1507.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=291bp|location=Sequence derived from alignment at C-linearis_contig111:481143..481433- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig111:481143..481433- >mRNA_C-linearis_contig111.1507.1 ID=mRNA_C-linearis_contig111.1507.1|Name=mRNA_C-linearis_contig111.1507.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=582bp|location=Sequence derived from alignment at C-linearis_contig111:481143..481433- (Chordaria linearis ClinC8C monoicous)back to top |