mRNA_C-linearis_contig110.1459.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig110.1459.1
Unique NamemRNA_C-linearis_contig110.1459.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig110.1459.1 vs. uniprot
Match: D8LEM0_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM0_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 9.680e-115
Identity = 346/772 (44.82%), Postives = 428/772 (55.44%), Query Frame = 1 
Query:   22 KETALLKAAVESLRAGLREKEDAVTELEREKEGXXXXXXXXXXXXXXXXXXXXXXXXXEAQIQRLEAKLTQAGNERSLTMSLVDTLKSAQNDLRAAHAQVSQRYTELENTAEDSAEAIRRGNVLLHSQQLKIDAQSRQVKRQEEDLVSLRQERELHLEKSDETAAELAQILRRERAVQGSITDAQAEVEELKGELGHMREAFGRHRNVLRKNQGVIDAHETALKDVSRSELLSLSLEAERQSARHLQASTQAASEMARVTAEKNSAVHESGALRIEIEDVKDNLEEAGRKLDEVQAKQSATAAMATAAGSRSTAKYRGRHINTLQQQQHHTSPEAHRDSLSQIAVSDRQPHPVAHPDRPESLFINPNNTNSNQREWGNNATLQQ-RSISPHDGSQGGTGVATSADQRRGNDLNQSRGDHSALQRPHHQVPTAATPGESPSSSIFRPSTGD-FLPPTGAGAPKDNPPHLSNSVGANDKP---PLRSP-NAAGFARQEPPASXXXXXXXXXXXXXXXXF-----GGTTRDFGSQRNAHVVAVPPEDRGPEE--SEAKTNGEGDG----DRGAAKRTSSARRSRSRSPLANASINGEEGADDGNETAVMTTRLLSPSSVGS------RKRAKTTAANVDAGDDGSRAGDAIGDGDGAASPAXXXXXGRDAAGYSR---PPRLSSTGTARREPSFSIGIGNSRKDTIR-HGDNGAPDDTDGLSDGVCASCGDIPYGLMINCSGCYRQHHSSCVPEGQRVGKGLGA-VFHCSKCSNN 2253
            K+ ALLKAA E+LRAG+REKED +TEL                                  I+ LEA+L +A   R+LTMSLV+TLKSAQNDLRA+HAQVSQRY ELEN  EDSAEA+RRGNVLLHSQQLK DAQ+RQ+KRQ+EDL +LR+ERE  L K+D  A ELAQ+LRRERA Q SI DAQ EV +LK       +AF +HR V+RK+Q VID HE ALKD +RS+LLSLSLEA++QS+RH QAS +AA+E AR TA+KN+A+ ES ALRIE + +KD LEEAGRKLDE+QA+QS +AA   A  +R++    G H N   QQ  HT P+ + DS SQ+A   R+     +    ES+F N  + N+ Q +  N+    Q RS  P        G  T  D              S++QR +   P          SS  RPS+   F+    AG P++    L ++ G  D     P  SP  AAG  R+   +  XXXXXXXXXXXXXXX      G   R  G+Q     V      RGP +    A   G+ DG    D G    +    RSR RSP       G + ++DG+E      R    S  GS      RKRAK  A   D                      XXXXX     G +    PP LS   T+ R   F  G     + +++  G +G     D   +GVC SCGD PYGLMINCSGC RQ+HSSCVP+GQ+VGKGLGA VF CSKC +N
Sbjct:   71 KDVALLKAAAENLRAGIREKEDVITEL----------------------------------IESLEAELAKAEAGRALTMSLVETLKSAQNDLRASHAQVSQRYAELENMLEDSAEAVRRGNVLLHSQQLKTDAQARQIKRQDEDLATLREERETQLAKADRNATELAQVLRRERAGQSSIADAQVEVGDLKAXXXXXXDAFAKHRGVVRKSQEVIDVHEKALKD-ARSKLLSLSLEADKQSSRHHQASAEAATETARATADKNAALRESRALRIEKDGLKDKLEEAGRKLDELQAQQSDSAAAMEAVAARNSVAVPGGHNNNGPQQ--HTYPKPNSDSSSQVATRGRRQQDFEN--HAESIFDN-GSANAPQVQIDNSPRQHQGRSSPPLLSVPTSLGTTTQGDNT------------SSVQRSYRAAPAEEAAEGQKLSSTNRPSSSTVFVRQAEAGLPREG--ALKSTNGRTDNNHNIPSSSPLPAAGVGRRSSASPAXXXXXXXXXXXXXXXXXRSGEGDAGRIGGTQIVHREVTTVSHSRGPNDVFDGAGRRGQRDGTDVVDGGRRGASGLRFRSRLRSPA------GTDYSNDGSEAV----RAAGGSVDGSDDAGSKRKRAKRGALEADX--------------------XXXXXXXXXXGGLTDSLPPPLLSGAATSSRLSHFDNGNSRPGEKSVQVQGKDG-----DSTPEGVCPSCGDTPYGLMINCSGCARQYHSSCVPDGQKVGKGLGATVFLCSKCRSN 753
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BLAST of mRNA_C-linearis_contig110.1459.1 vs. uniprot
Match: A0A6H5KZW7_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW7_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 1.700e-75
Identity = 281/679 (41.38%), Postives = 347/679 (51.10%), Query Frame = 1 
Query:  328 RYTELENTAEDSAEAIRRGNVLLHSQQLKIDAQSRQVKRQEEDLVSLRQERELHLEKSDETAAELAQILRRERAVQGSITDAQAEVEELKGELGHMREAFGRHRNVLRKNQGVIDAHETALKDVSRSELLSLSLEAERQSARHLQASTQAASEMARVTAEKNSAVHESGALRIEIEDVKDNLEEAGRKLDEVQAKQSATAAMATAAGSRSTAKYRGRHINTLQQQQHHTSPEAHRDSLSQIAVSDRQPHPVAHPDRPESLFINPNNTNSNQREWGNNATLQQRSISPHDGSQGGTGVATSADQRRGNDLNQSRGDHSALQRPHHQVPTAATPGESPS-SSIFRPSTGDFLPPTGAGAPKDNPPH--LSNSVGANDKP---PLRSP-NAAGFAR--QEPPASXXXXXXXXXXXXXXXXFGG---TTRDFGSQRNAHVVAVPPEDRGPEESEAKTNGEGDG------------------------DRGAAKRTSSARRSRSRSPLANASINGEEGADDGNETAVMTTRLLSPSSVGSRKRAKTTAANVDAGDDGSRAGDAIGDGDGAASPAXXXXXGRDAAGYSRPPRLSSTGTARREPSFSIGIGNSRKDTIRHGDNGAPDDTDGLSDGVCASCGDIPYGLMINCSGCYRQHHSSCVPEGQRVGKGLGA-VFHCSKCSNN 2253
            RY ELEN  EDSAEA+RRGNVLLHSQQLK DAQ+RQ+KRQ+EDL +LR+ERE  L K+D  A ELAQ+LRRERA Q SI DAQ EV +LK EL  MR+AF +   V+RK+Q VI+AHE ALK+ +RSELLSLSLEA++QS+RH QAS +AA+E AR TA+KN+A+ ES ALRIE E +KD LEEAGR    +QA++S   A   A  +R++A  +G H N+  QQ  HT P+ + DS SQ+A   R+         PE  + N  ++N+ Q +  N    QQ   SP   S     V TS           ++G  S+  R  ++V +A    E    SS  RPS+   L      A  ++P    L ++ G  D     P  SP  AAG  R     PA+  XXXXXXXXXX     GG     R  G+Q     V     +RGP       N   DG                                              A+    +G+DD                   RKRAKT     DA                  +  XXXXX         PP LS   T+ R   F  G     +     G  G     D   +GVC SCGD PYGLMINCSGC RQ+HSSCVP+GQ+VGKGLGA VF CSKCS N
Sbjct:   33 RYAELENMLEDSAEALRRGNVLLHSQQLKTDAQARQIKRQDEDLATLREERETQLAKADRNATELAQVLRRERAGQSSIADAQVEVGDLKAELAEMRDAFAK--GVVRKSQEVINAHEKALKN-ARSELLSLSLEADKQSSRHHQASAEAATETARATADKNAALRESRALRIEKEGLKDKLEEAGRXXXXLQAQRSELGAAMEAVAARNSAAVQGGHSNSGPQQ--HTYPKPNSDSSSQVATRGRRQQDFEK--HPECTYDN-GSSNAPQVQIDNFPRQQQGRSSPPSLS-----VHTSLGTT-------TQGGASSSLRRSYRVASAEEAAEGQKLSSTHRPSSKSVL---SRQAEPESPREGALKSTNGRTDNNHSLPSSSPFPAAGVGRVASASPATSAXXXXXXXXXXTDRRKGGEGDAGRIGGTQNIDPDVTAVSHNRGP-------NNVLDGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAARVDVDGSDDAGSK---------------RKRAKTGPLEADA------------------AXXXXXXXXXGLTDSLSPPLLSGATTSSRLSHFDAGNNRPGEAVQVQGKGG-----DSTLEGVCPSCGDTPYGLMINCSGCARQYHSSCVPDGQKVGKGLGATVFLCSKCSGN 643
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig110.1459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEM0_ECTSI9.680e-11544.82PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZW7_9PHAE1.700e-7541.38PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig110contigC-linearis_contig110:289861..295848 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPHD-type zinc finger protein
Ec32 orthologEc-23_002510.1
Exons11
Model size2265
Cds size2265
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927475.6348052-CDS-C-linearis_contig110:289860..2900821622927475.6348052-CDS-C-linearis_contig110:289860..290082Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 289861..290082 -
1690879723.1813586-CDS-C-linearis_contig110:289860..2900821690879723.1813586-CDS-C-linearis_contig110:289860..290082Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 289861..290082 -
1622927475.648921-CDS-C-linearis_contig110:290537..2916681622927475.648921-CDS-C-linearis_contig110:290537..291668Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 290538..291668 -
1690879723.1929183-CDS-C-linearis_contig110:290537..2916681690879723.1929183-CDS-C-linearis_contig110:290537..291668Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 290538..291668 -
1622927475.664056-CDS-C-linearis_contig110:291963..2920811622927475.664056-CDS-C-linearis_contig110:291963..292081Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 291964..292081 -
1690879723.2014337-CDS-C-linearis_contig110:291963..2920811690879723.2014337-CDS-C-linearis_contig110:291963..292081Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 291964..292081 -
1622927475.6803946-CDS-C-linearis_contig110:292432..2925251622927475.6803946-CDS-C-linearis_contig110:292432..292525Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 292433..292525 -
1690879723.209058-CDS-C-linearis_contig110:292432..2925251690879723.209058-CDS-C-linearis_contig110:292432..292525Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 292433..292525 -
1622927475.693982-CDS-C-linearis_contig110:293024..2930931622927475.693982-CDS-C-linearis_contig110:293024..293093Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 293025..293093 -
1690879723.216953-CDS-C-linearis_contig110:293024..2930931690879723.216953-CDS-C-linearis_contig110:293024..293093Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 293025..293093 -
1622927475.7083037-CDS-C-linearis_contig110:293251..2933911622927475.7083037-CDS-C-linearis_contig110:293251..293391Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 293252..293391 -
1690879723.225763-CDS-C-linearis_contig110:293251..2933911690879723.225763-CDS-C-linearis_contig110:293251..293391Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 293252..293391 -
1622927475.7215447-CDS-C-linearis_contig110:293798..2938821622927475.7215447-CDS-C-linearis_contig110:293798..293882Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 293799..293882 -
1690879723.2359002-CDS-C-linearis_contig110:293798..2938821690879723.2359002-CDS-C-linearis_contig110:293798..293882Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 293799..293882 -
1622927475.7343135-CDS-C-linearis_contig110:294402..2944811622927475.7343135-CDS-C-linearis_contig110:294402..294481Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 294403..294481 -
1690879723.2468314-CDS-C-linearis_contig110:294402..2944811690879723.2468314-CDS-C-linearis_contig110:294402..294481Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 294403..294481 -
1622927475.7497768-CDS-C-linearis_contig110:294861..2949861622927475.7497768-CDS-C-linearis_contig110:294861..294986Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 294862..294986 -
1690879723.2632444-CDS-C-linearis_contig110:294861..2949861690879723.2632444-CDS-C-linearis_contig110:294861..294986Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 294862..294986 -
1622927475.7656791-CDS-C-linearis_contig110:295371..2954731622927475.7656791-CDS-C-linearis_contig110:295371..295473Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 295372..295473 -
1690879723.2727923-CDS-C-linearis_contig110:295371..2954731690879723.2727923-CDS-C-linearis_contig110:295371..295473Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 295372..295473 -
1622927475.7843864-CDS-C-linearis_contig110:295746..2958481622927475.7843864-CDS-C-linearis_contig110:295746..295848Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 295747..295848 -
1690879723.2809868-CDS-C-linearis_contig110:295746..2958481690879723.2809868-CDS-C-linearis_contig110:295746..295848Chordaria linearis ClinC8C monoicousCDSC-linearis_contig110 295747..295848 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig110.1459.1prot_C-linearis_contig110.1459.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig110 289861..295848 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig110.1459.1

>prot_C-linearis_contig110.1459.1 ID=prot_C-linearis_contig110.1459.1|Name=mRNA_C-linearis_contig110.1459.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=755bp
RDAAGLSKETALLKAAVESLRAGLREKEDAVTELEREKEGLLEKVASLES
ATRVNVKLAQKVAHLEAQIQRLEAKLTQAGNERSLTMSLVDTLKSAQNDL
RAAHAQVSQRYTELENTAEDSAEAIRRGNVLLHSQQLKIDAQSRQVKRQE
EDLVSLRQERELHLEKSDETAAELAQILRRERAVQGSITDAQAEVEELKG
ELGHMREAFGRHRNVLRKNQGVIDAHETALKDVSRSELLSLSLEAERQSA
RHLQASTQAASEMARVTAEKNSAVHESGALRIEIEDVKDNLEEAGRKLDE
VQAKQSATAAMATAAGSRSTAKYRGRHINTLQQQQHHTSPEAHRDSLSQI
AVSDRQPHPVAHPDRPESLFINPNNTNSNQREWGNNATLQQRSISPHDGS
QGGTGVATSADQRRGNDLNQSRGDHSALQRPHHQVPTAATPGESPSSSIF
RPSTGDFLPPTGAGAPKDNPPHLSNSVGANDKPPLRSPNAAGFARQEPPA
SPTTSAADAGGGGGGGGFGGTTRDFGSQRNAHVVAVPPEDRGPEESEAKT
NGEGDGDRGAAKRTSSARRSRSRSPLANASINGEEGADDGNETAVMTTRL
LSPSSVGSRKRAKTTAANVDAGDDGSRAGDAIGDGDGAASPADGAGRGRD
AAGYSRPPRLSSTGTARREPSFSIGIGNSRKDTIRHGDNGAPDDTDGLSD
GVCASCGDIPYGLMINCSGCYRQHHSSCVPEGQRVGKGLGAVFHCSKCSN
NREG*
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mRNA from alignment at C-linearis_contig110:289861..295848-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig110.1459.1 ID=mRNA_C-linearis_contig110.1459.1|Name=mRNA_C-linearis_contig110.1459.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5988bp|location=Sequence derived from alignment at C-linearis_contig110:289861..295848- (Chordaria linearis ClinC8C monoicous)
CGAGACGCAGCGGGATTGTCGAAGGAAACGGCTCTCCTCAAGGCCGCTGT
GGAGAGCCTGCGGGCAGGATTGCGGGAGAAGGAAGACGCCGTCACGGAGC
TGGTGAGTCAGCACCGAATCGAGGGAAGGAACAGCTTTTCACCCGCAACA
CCGTCGACAGATTATGTTCCACGCCGCATTCACGAGAGTTTTGCTCTGTC
CGCAAGGCATGACCAAGTGGGACATAGCTCGCTGTTGCTCAGGAATGGAC
CATAATAGCAAAGGCCAGACACACACGGGGACCCACTCCTCGCCGATCTT
GTCCGAATAGCGAGCGACGACAGACCCGTTGTAAAGCAAGCTGAATTTCT
TTTGCGTCCTGTTTCCTCCTACCAGGAGAGGGAGAAGGAGGGCTTGCTGG
AGAAGGTGGCCAGCCTTGAGTCTGCCACCCGAGTCAACGTCAAGCTCGCC
CAGAAGGTGGCGCACCTGGAAGCCCAGGTGAATGGAAAGTCGGCTTTCAC
CTGATAAAACGCTTTCACCTGTTAAAACGCTTAGAAGCTCTTGAAGCAAC
AAGGGGGCGGAGGGGGTGGCTGACGCAGGGCCGGGGGCGTCTTCCGCGGG
CAGCTGCACGCACTAGATCGATGCACACTTTACCACACCATTGACATTCC
CTTGGGCGCGCGTACGTGTATGACGTACTTCGTTGATTGGGAAGACAGAC
AGACGAGCGCTGTACCCGGACGACTCGACTCTTGTCGTGGGCGCTCATCA
CATCGTGATGTGGTACCCAAAATGATGTTGACGACTACACGGTATATAGT
GCCAACAAAATTGTACTGCATGCTTAGCAAAGGCTTCCTGGTGGTTGGGG
CACGTACCACAGATTCAAAGGCTCGAGGCGAAGCTCACACAGGCAGGCAA
CGAACGCTCCCTGACAATGAGTCTTGTGGACACGCTCAAGTCCGCCCAGA
ACGATCTTCGAGCAGCCCACGCTCAGGTCTCCCAGAGGTGGGGTGCCGTA
CCGTGTCGTGTAGATCCCTGATGGGTGATGAGTGCATTTGTCCGATCAAG
GCATGTGCACGATCAGTCACGAATCAATCGCAATCTAGGCGCAAAATGCC
GTCGTTTCTTGCTGCCTGCTCCATAGCTTTCGTGCTTGTTTTGCGCTCCG
GCGGCCAGCAGGCGGAACGCTGAGAGTGAATGCAGCCAACGTACATTCAG
TTTACCGTCTAGGTCCAACACATCGCGAACGCCGAGAGGCCCAGTCAAGG
GATCCGATCGAGGGCTAGGATCTTTTCCCACACCTACCTGTCGATAGCAA
GAGCTCTTTATGCCCACCCCTAAGTTCATTTATGCGACAGCTCCTATCAC
CTCCTCCCCAACCCAAGGTACACGGAGCTCGAAAACACGGCGGAAGATTC
GGCGGAGGCTATCCGCCGTGGGAACGTCCTTCTGCACAGTCAACAGGTGA
ATCAAACGTGCACAGCTGAGCACAGTGGCTGGATTGGTTTGGGACCGTGT
TGTCAGGAATTGGTCTGGGGCTTTGTTACAGGGACGATGGGTCTCGTCTC
ACTGCGTTTGGTTGTGCGAGTCTCACTGGGTGGCCTTCAACTCGCTCCTC
TTGCTCGAGGAGTTTTGGCCTAGACCTCGACTTCTCTTCTCCCCTTTTTG
TGATGAGGATCACATAAATGATCCCGGGCTTTCGACTCATACGCTGATGG
GTCGATTATGAGCACCTTTTTGTCGCCCGTCAGCCGCTCCGTTGGAAACA
CGCCGTTGCTCCAGGTTCCCGTGGTCTTGCTTGTTGCCTGTTTTCATTCA
CTCGCTGGTGGCAGCGAAGGGGGGGCAATACAGCGGAATCAGTTTCCTCG
TTCTCCACGCCGTCATTTTCTCCAACATACCTGCAGCCTCACTCGACAAC
ATGGGCGCTCACCTCCCTCCCTTGTGTGCATCGTTGTGATGCGGTCTATG
GTGCCTGGTGGTGCAGCTGAAGATCGATGCTCAGTCCCGTCAGGTGAAGC
GGCAAGAGGAGGACCTCGTGTCCCTCCGCCAGGAGAGGGAGCTGCACCTG
GTGCGTACAATATACAGTGCCAAAATACACCTTGGTTTTGTTACCATAGA
CGGGAACGCAACGGTGATTTGACAGATAGGGTCTCTGGGTCACGCACTGT
GTCTGCGCTGCCCTGTTTGGGCCAATAAGTCGATCCTTGCTTGAATAGAG
CAGAAGAAGTTGCTTCCGAGAGGAGGACATGCGCTGCACCAGTTAGTTGA
GTAACAACAGATTACCGCCCATATCTTATTCCCTTCTTGTGTTGCAGACG
GACTCTTGCCTGCCCTGCGGATCGTGCTCGCAACAGCCCACCCCGTATAG
CCCACCCCACCACACGCAGACATGGAATCATAAAAACATGGCACGAAGTA
ACGGGACATGCCCTTGGTTGCCTCGACACCTTGACTCGACGCACGACGCG
TACGCAGGAAAAATCGGACGAAACCGCAGCGGAGCTAGCCCAGATTCTGA
GGCGTGAGAGGGCAGTGCAGGGCAGCATCACCGACGCGCAGGCCGAGGTG
GAGGAGCTGAAGGGCGAGTTGGGGCACATGCGAGAGGCTTTTGGCAGGTT
AGTCTCAATCCTTTAGTATGTTTGTGTTCCGGTATTATTGCAGGTGTTCA
TGTCGCATGTTGTGTGCTTGCTGAACGTCGAATTGACTCCTTTATACCAT
CCCGTCGACGTTGAAGTCTTTCCTGCATTATTTGGCTTCCTTGTCGATTG
ATCAGGCACAGGAACGTGCTGCGCAAGAACCAAGGTGTGATTGACGCGCA
CGAGACGGCTCTCAAGGATGTGAGGTAAGCAACCAGTGACTGACATGTGT
TTCACTTCGTGCCCCGCGTCTAGAAGCGCTGGGGAAACAGGCGTTCGTTC
GTCGTGCCTGGTTGGTTACCTTTTTGATGAACTCCCGATGATATAAAGGC
AATTCCCTGGTAGGTTGGTGTGGCCGTCCCGCGTAACGTGCCCAACAAAA
ATGGACACGAAAGGTGAATGAATACGCAATTCATCGACCGCTAGATTTTT
GCGTGTTTTCCCTTCTTCTTGGGCAAGCACTACACTGCAACAAGCGGGGA
GTCGGGCGATCCTCGATCATGGCTGCCACCCTTTCCTTTCTCCGTTCACA
CCCCGGGTATCGTCAACTTCCATCAAGCTCGACACTGAACACCGTCCATG
CACGCGTTTTGGTCAACCCCTCGCTGATGCCCTTCCCGGCAATTCACATG
TTCCCTGATCGGCATGCTTGGCGACGATTTCAACCACAACGACCGTCTTG
GGTGGCTTCTCTTGGCGCTTCAGCAGGTCCGAGCTGCTTTCGCTGTCCCT
CGAGGCCGAGAGGCAATCCGCCCGGCACCTCCAGGCTTCTACTCAAGCTG
CCTCCGAGATGGCGCGGTAGGTGTAGCTGTTGATGCTTTGAGGCCGAGAT
GGAGCAAAACCGAAGCCTCCCCTCGCCGAGTTTACCGATGCTGCTGCTCT
GGGCTATTGCAGATGGTTCCTCCACGACGTCTCGGGGAGTAGACGGCACG
TCCACCCTGGCACGAGAGAAAGTTTGGCTTCTCTCAAGATTCGATTTAAG
TTGTTAGCGCACAACCGCGAAAACTATGAGCGAGAATACTTTCACTCGCG
AGAACGCTAAATAGTCCCCTCCCGAACAGATTTTGTCCACTTTGCGGTCG
AAGATTTGCGTTCGGCACGTCGCCCCTATCTTCAGTAACGGGCTCCTCTT
CGCGTTCCACCTGGCAGCGTAACGGCAGAGAAGAATAGCGCAGTTCACGA
GTCCGGAGCCCTGAGGATCGAAATCGAAGACGTTAAGGACAACCTGGAGG
AAGCCGGACGCAAGTTGGACGAGGTTCAAGCCAAGGTACCAACTACTCTT
GTGGTTCATTTTTGTCAAACGCCTGACGTGTGAATCTTGTGGTGCTGATA
TTTCTCTTTTTCACTCATGCCTGGTGAGATACGTCCGTGATGACGTAGTG
CTTTGGGCATACTCCTTTGTTTGTGATGCGACTGCATGGAGTTTGGTCGA
TCGTGGTCGTCGCCGTTACCCTGCGTTTAGCGCGCAAATGGCGACTGTCC
CGCTGGTCTTGGCATTTTTTTCCTGGTATCACAAACGACCCCCCCCCGTT
TCACGCCGTCGGTGTGAATCTTTTCTTCAGCAATCCGCGACCGCGGCAAT
GGCAACGGCAGCTGGATCCAGAAGCACCGCGAAGTATCGTGGAAGACACA
TCAACACCCTGCAGCAGCAGCAGCACCACACCTCACCTGAAGCGCATCGT
GATAGCCTGTCACAAATAGCTGTATCAGACCGACAGCCCCACCCCGTAGC
GCACCCAGACCGCCCCGAATCCCTCTTCATCAACCCCAACAACACGAACA
GCAACCAACGGGAGTGGGGCAACAACGCCACTCTGCAGCAGCGTTCCATC
TCCCCCCACGATGGGTCACAGGGTGGCACCGGTGTCGCCACTTCCGCCGA
CCAGCGACGAGGCAACGACCTGAATCAGTCCCGGGGCGACCACTCCGCAC
TCCAGCGCCCCCACCACCAGGTGCCCACGGCGGCAACACCCGGTGAATCA
CCTTCGTCGTCGATTTTTCGACCCTCCACCGGCGACTTTCTGCCTCCGAC
GGGAGCGGGAGCGCCGAAGGACAACCCGCCTCATCTGTCAAATAGTGTCG
GAGCCAACGACAAACCTCCGTTGCGTTCGCCCAACGCGGCTGGCTTTGCC
CGGCAGGAACCCCCTGCCAGCCCTACCACCTCGGCCGCAGATGCTGGTGG
GGGCGGGGGCGGGGGTGGATTTGGTGGCACCACCCGCGATTTTGGTAGCC
AAAGGAACGCCCACGTCGTCGCTGTTCCTCCGGAAGATCGCGGCCCGGAG
GAATCAGAAGCAAAGACCAACGGGGAAGGTGACGGCGATCGCGGTGCTGC
GAAAAGGACGTCCTCCGCCCGGCGATCCCGGTCCCGTTCGCCCTTGGCAA
ACGCCAGCATCAACGGGGAGGAGGGTGCCGATGATGGCAATGAAACAGCA
GTCATGACTACAAGGCTATTGTCTCCGTCTTCCGTGGGAAGCAGGAAGAG
GGCGAAGACGACTGCGGCGAATGTCGATGCTGGTGATGATGGTTCTCGTG
CTGGTGACGCTATTGGTGATGGCGATGGTGCTGCTTCTCCCGCTGATGGG
GCAGGCAGGGGACGAGATGCGGCGGGGTATTCCCGGCCTCCCCGTCTGTC
CAGCACCGGTACGGCCCGCCGCGAACCCAGCTTCTCGATTGGGATAGGCA
ACAGCCGCAAGGTTAGAGAGGCTTGCCTAGTCGGGCCCAGACCAGAATAC
TGCAAGGTTGAGGATGCAACGAGCGAAGTACAAGAGATTTTGGTAGCGGT
GTCAAGACAGAGATTTTGGTAGCGGTCCCGTTACGCCCCTTCCTGCCCAT
ACCCTGTGCCGATCCTAGGCTCTGACAGAAACCCAGGAGGCCAACTCGCT
AGGAGTATCAGGCCTTTGATGTGGCCCCTGCAAGGCGGCAGGGTTAGAGT
TGAGGTGTTCTTGAGCTTGACGACGTGACAGCCTCTTTCCACCCCCCACA
AGATAACAACGACTTGTCCCTAGAAAGTGTTTTATCTTTTGTATTTGCTG
CTGCAACACAATGACGTGAACGTGCGTGGTATCTCGTGGATGCAAGCCTT
AGTACATCACAAAAAAAACGTAACGGATGTTTCCATTTTATGCACGTGGA
ATTCTGTGGGTGGAAGGACACGATTCGGCATGGCGACAACGGCGCTCCCG
ACGACACCGATGGCCTCTCCGACGGGGTCTGTGCCTCCTGTGGCGACATT
CCCTACGGGCTCATGATCAACTGCAGCGGCTGCTACCGCCAACACCACAG
CTCATGCGTGCCGGAGGGGCAGAGGGTCGGCAAGGGGCTCGGGGCCGTGT
TCCACTGCTCCAAGTGCAGCAACAACAGGGAAGGGTGA
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Coding sequence (CDS) from alignment at C-linearis_contig110:289861..295848-

>mRNA_C-linearis_contig110.1459.1 ID=mRNA_C-linearis_contig110.1459.1|Name=mRNA_C-linearis_contig110.1459.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4530bp|location=Sequence derived from alignment at C-linearis_contig110:289861..295848- (Chordaria linearis ClinC8C monoicous)
CGAGACGCAGCGGGATTGTCGAAGGAAACGGCTCTCCTCAAGGCCGCTGT
GGAGAGCCTGCGGGCAGGATTGCGGGAGAAGGAAGACGCCGTCACGGAGC
TGCGAGACGCAGCGGGATTGTCGAAGGAAACGGCTCTCCTCAAGGCCGCT
GTGGAGAGCCTGCGGGCAGGATTGCGGGAGAAGGAAGACGCCGTCACGGA
GCTGGAGAGGGAGAAGGAGGGCTTGCTGGAGAAGGTGGCCAGCCTTGAGT
CTGCCACCCGAGTCAACGTCAAGCTCGCCCAGAAGGTGGCGCACCTGGAA
GCCCAGGAGAGGGAGAAGGAGGGCTTGCTGGAGAAGGTGGCCAGCCTTGA
GTCTGCCACCCGAGTCAACGTCAAGCTCGCCCAGAAGGTGGCGCACCTGG
AAGCCCAGATTCAAAGGCTCGAGGCGAAGCTCACACAGGCAGGCAACGAA
CGCTCCCTGACAATGAGTCTTGTGGACACGCTCAAGTCCGCCCAGAACGA
TCTTCGAGCAGCCCACGCTCAGGTCTCCCAGAGATTCAAAGGCTCGAGGC
GAAGCTCACACAGGCAGGCAACGAACGCTCCCTGACAATGAGTCTTGTGG
ACACGCTCAAGTCCGCCCAGAACGATCTTCGAGCAGCCCACGCTCAGGTC
TCCCAGAGGTACACGGAGCTCGAAAACACGGCGGAAGATTCGGCGGAGGC
TATCCGCCGTGGGAACGTCCTTCTGCACAGTCAACAGGTACACGGAGCTC
GAAAACACGGCGGAAGATTCGGCGGAGGCTATCCGCCGTGGGAACGTCCT
TCTGCACAGTCAACAGCTGAAGATCGATGCTCAGTCCCGTCAGGTGAAGC
GGCAAGAGGAGGACCTCGTGTCCCTCCGCCAGGAGAGGGAGCTGCACCTG
CTGAAGATCGATGCTCAGTCCCGTCAGGTGAAGCGGCAAGAGGAGGACCT
CGTGTCCCTCCGCCAGGAGAGGGAGCTGCACCTGGAAAAATCGGACGAAA
CCGCAGCGGAGCTAGCCCAGATTCTGAGGCGTGAGAGGGCAGTGCAGGGC
AGCATCACCGACGCGCAGGCCGAGGTGGAGGAGCTGAAGGGCGAGTTGGG
GCACATGCGAGAGGCTTTTGGCAGGAAAAATCGGACGAAACCGCAGCGGA
GCTAGCCCAGATTCTGAGGCGTGAGAGGGCAGTGCAGGGCAGCATCACCG
ACGCGCAGGCCGAGGTGGAGGAGCTGAAGGGCGAGTTGGGGCACATGCGA
GAGGCTTTTGGCAGGCACAGGAACGTGCTGCGCAAGAACCAAGGTGTGAT
TGACGCGCACGAGACGGCTCTCAAGGATGTGAGGCACAGGAACGTGCTGC
GCAAGAACCAAGGTGTGATTGACGCGCACGAGACGGCTCTCAAGGATGTG
AGCAGGTCCGAGCTGCTTTCGCTGTCCCTCGAGGCCGAGAGGCAATCCGC
CCGGCACCTCCAGGCTTCTACTCAAGCTGCCTCCGAGATGGCGCGCAGGT
CCGAGCTGCTTTCGCTGTCCCTCGAGGCCGAGAGGCAATCCGCCCGGCAC
CTCCAGGCTTCTACTCAAGCTGCCTCCGAGATGGCGCGCGTAACGGCAGA
GAAGAATAGCGCAGTTCACGAGTCCGGAGCCCTGAGGATCGAAATCGAAG
ACGTTAAGGACAACCTGGAGGAAGCCGGACGCAAGTTGGACGAGGTTCAA
GCCAAGCGTAACGGCAGAGAAGAATAGCGCAGTTCACGAGTCCGGAGCCC
TGAGGATCGAAATCGAAGACGTTAAGGACAACCTGGAGGAAGCCGGACGC
AAGTTGGACGAGGTTCAAGCCAAGCAATCCGCGACCGCGGCAATGGCAAC
GGCAGCTGGATCCAGAAGCACCGCGAAGTATCGTGGAAGACACATCAACA
CCCTGCAGCAGCAGCAGCACCACACCTCACCTGAAGCGCATCGTGATAGC
CTGTCACAAATAGCTGTATCAGACCGACAGCCCCACCCCGTAGCGCACCC
AGACCGCCCCGAATCCCTCTTCATCAACCCCAACAACACGAACAGCAACC
AACGGGAGTGGGGCAACAACGCCACTCTGCAGCAGCGTTCCATCTCCCCC
CACGATGGGTCACAGGGTGGCACCGGTGTCGCCACTTCCGCCGACCAGCG
ACGAGGCAACGACCTGAATCAGTCCCGGGGCGACCACTCCGCACTCCAGC
GCCCCCACCACCAGGTGCCCACGGCGGCAACACCCGGTGAATCACCTTCG
TCGTCGATTTTTCGACCCTCCACCGGCGACTTTCTGCCTCCGACGGGAGC
GGGAGCGCCGAAGGACAACCCGCCTCATCTGTCAAATAGTGTCGGAGCCA
ACGACAAACCTCCGTTGCGTTCGCCCAACGCGGCTGGCTTTGCCCGGCAG
GAACCCCCTGCCAGCCCTACCACCTCGGCCGCAGATGCTGGTGGGGGCGG
GGGCGGGGGTGGATTTGGTGGCACCACCCGCGATTTTGGTAGCCAAAGGA
ACGCCCACGTCGTCGCTGTTCCTCCGGAAGATCGCGGCCCGGAGGAATCA
GAAGCAAAGACCAACGGGGAAGGTGACGGCGATCGCGGTGCTGCGAAAAG
GACGTCCTCCGCCCGGCGATCCCGGTCCCGTTCGCCCTTGGCAAACGCCA
GCATCAACGGGGAGGAGGGTGCCGATGATGGCAATGAAACAGCAGTCATG
ACTACAAGGCTATTGTCTCCGTCTTCCGTGGGAAGCAGGAAGAGGGCGAA
GACGACTGCGGCGAATGTCGATGCTGGTGATGATGGTTCTCGTGCTGGTG
ACGCTATTGGTGATGGCGATGGTGCTGCTTCTCCCGCTGATGGGGCAGGC
AGGGGACGAGATGCGGCGGGGTATTCCCGGCCTCCCCGTCTGTCCAGCAC
CGGTACGGCCCGCCGCGAACCCAGCTTCTCGATTGGGATAGGCAACAGCC
GCAAGCAATCCGCGACCGCGGCAATGGCAACGGCAGCTGGATCCAGAAGC
ACCGCGAAGTATCGTGGAAGACACATCAACACCCTGCAGCAGCAGCAGCA
CCACACCTCACCTGAAGCGCATCGTGATAGCCTGTCACAAATAGCTGTAT
CAGACCGACAGCCCCACCCCGTAGCGCACCCAGACCGCCCCGAATCCCTC
TTCATCAACCCCAACAACACGAACAGCAACCAACGGGAGTGGGGCAACAA
CGCCACTCTGCAGCAGCGTTCCATCTCCCCCCACGATGGGTCACAGGGTG
GCACCGGTGTCGCCACTTCCGCCGACCAGCGACGAGGCAACGACCTGAAT
CAGTCCCGGGGCGACCACTCCGCACTCCAGCGCCCCCACCACCAGGTGCC
CACGGCGGCAACACCCGGTGAATCACCTTCGTCGTCGATTTTTCGACCCT
CCACCGGCGACTTTCTGCCTCCGACGGGAGCGGGAGCGCCGAAGGACAAC
CCGCCTCATCTGTCAAATAGTGTCGGAGCCAACGACAAACCTCCGTTGCG
TTCGCCCAACGCGGCTGGCTTTGCCCGGCAGGAACCCCCTGCCAGCCCTA
CCACCTCGGCCGCAGATGCTGGTGGGGGCGGGGGCGGGGGTGGATTTGGT
GGCACCACCCGCGATTTTGGTAGCCAAAGGAACGCCCACGTCGTCGCTGT
TCCTCCGGAAGATCGCGGCCCGGAGGAATCAGAAGCAAAGACCAACGGGG
AAGGTGACGGCGATCGCGGTGCTGCGAAAAGGACGTCCTCCGCCCGGCGA
TCCCGGTCCCGTTCGCCCTTGGCAAACGCCAGCATCAACGGGGAGGAGGG
TGCCGATGATGGCAATGAAACAGCAGTCATGACTACAAGGCTATTGTCTC
CGTCTTCCGTGGGAAGCAGGAAGAGGGCGAAGACGACTGCGGCGAATGTC
GATGCTGGTGATGATGGTTCTCGTGCTGGTGACGCTATTGGTGATGGCGA
TGGTGCTGCTTCTCCCGCTGATGGGGCAGGCAGGGGACGAGATGCGGCGG
GGTATTCCCGGCCTCCCCGTCTGTCCAGCACCGGTACGGCCCGCCGCGAA
CCCAGCTTCTCGATTGGGATAGGCAACAGCCGCAAGGACACGATTCGGCA
TGGCGACAACGGCGCTCCCGACGACACCGATGGCCTCTCCGACGGGGTCT
GTGCCTCCTGTGGCGACATTCCCTACGGGCTCATGATCAACTGCAGCGGC
TGCTACCGCCAACACCACAGCTCATGCGTGCCGGAGGGGCAGAGGGTCGG
CAAGGGGCTCGGGGCCGTGTTCCACTGCTCCAAGTGCAGCAACAACAGGG
AAGGGTGAGACACGATTCGGCATGGCGACAACGGCGCTCCCGACGACACC
GATGGCCTCTCCGACGGGGTCTGTGCCTCCTGTGGCGACATTCCCTACGG
GCTCATGATCAACTGCAGCGGCTGCTACCGCCAACACCACAGCTCATGCG
TGCCGGAGGGGCAGAGGGTCGGCAAGGGGCTCGGGGCCGTGTTCCACTGC
TCCAAGTGCAGCAACAACAGGGAAGGGTGA
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