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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-16_002950.2 |
| Exons | 3 |
| Model size | 709 |
| Cds size | 708 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927427.7737334-CDS-C-linearis_contig11:3644143..3644495 | 1622927427.7737334-CDS-C-linearis_contig11:3644143..3644495 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 3644144..3644495 - |
| 1690879694.3214288-CDS-C-linearis_contig11:3644143..3644495 | 1690879694.3214288-CDS-C-linearis_contig11:3644143..3644495 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 3644144..3644495 - |
| 1622927427.793342-CDS-C-linearis_contig11:3644995..3645069 | 1622927427.793342-CDS-C-linearis_contig11:3644995..3645069 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 3644996..3645069 - |
| 1690879694.3315504-CDS-C-linearis_contig11:3644995..3645069 | 1690879694.3315504-CDS-C-linearis_contig11:3644995..3645069 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 3644996..3645069 - |
| 1622927427.8094327-CDS-C-linearis_contig11:3645238..3645520 | 1622927427.8094327-CDS-C-linearis_contig11:3645238..3645520 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 3645239..3645520 - |
| 1690879694.343764-CDS-C-linearis_contig11:3645238..3645520 | 1690879694.343764-CDS-C-linearis_contig11:3645238..3645520 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 3645239..3645520 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1414.1 >prot_C-linearis_contig11.1414.1 ID=prot_C-linearis_contig11.1414.1|Name=mRNA_C-linearis_contig11.1414.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=236bp
PDNRNAPEVVPERAMSASGRLLSPTPSSGGYSGYGGGGRLESYGAVEGGG
DGGGGGGGGGGLGGGISGKIKWWLDRGGAEEGGSSPRGGGRAVGGTSSPA
SPVSVSTARSGRTNWWEDSDGDDGASSLASFAQSDAASDAGSDVSGVSSR
SGATWMTEGGGGRYGSSGQHPGRGTAPLRRAASVASSSSHGRRTSRPSDR
RRRFGGSAAGSVRGGLEQRPPPLTMQAGAAGGGGGG back to topmRNA from alignment at C-linearis_contig11:3644143..3645520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig11.1414.1 ID=mRNA_C-linearis_contig11.1414.1|Name=mRNA_C-linearis_contig11.1414.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1378bp|location=Sequence derived from alignment at C-linearis_contig11:3644143..3645520- (Chordaria linearis ClinC8C monoicous)
CCGGACAACCGAAACGCCCCGGAGGTTGTGCCGGAGAGGGCCATGTCCGC
GTCGGGCCGGCTGCTCTCGCCGACGCCGAGCAGTGGCGGGTACAGCGGGT
ACGGAGGTGGCGGTCGGCTAGAGTCGTATGGGGCCGTTGAGGGCGGGGGC
GACGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTCTTGGCGGCGGGATCTC
GGGGAAGATCAAGTGGTGGCTAGACCGCGGGGGTGCCGAGGAGGGTGGTT
CGTCCCCTCGCGGCGGTGGGCGAGCAGTAGGGGTGAGTGTGCGCTCATTT
GTTGCTGTTGTAGGTGGTGGTGGTGGTAGTGGTGAAGACCAACACGGCCC
CGCTCCGAGAAGGTATAAAGTTGGTTGGCAATTGCTCGGAAATTTTGGCT
GTGCTGAGACCGTTACCATGAACCGAGTCTTTTTGTGTGTTTCTCGTTCA
GGGTACGTCGTCGCCGGCGTCCCCCGTGTCGGTTTCCACTGCCAGGAGCG
GCCGAACCAATTGGTGGGAAGACAGGTACGTGTACATGTGTGTGTGTGTG
TGAAGCGATGGGTTTGACAGGAAAATCAAAGCATTGTTCACATCTGCTTG
TAGCCGCTTAAAAGCCTACCTCCCAGATATCTACATTTTGTTCCCAAAGC
TGTTGTATTCCATCCAAGCACGTGATGTTCTGGTCCAAGTGTGTCCACGG
TGTGCACGGTGAGCGATGCCCCGTCGCTGGCTAGCCCCGTGGCGGCGCTG
GACTCGCCGCTGTCTTACAGAGCCGTTTTCCTCCTCAAACTTTCGTGGAA
AGTTGGGGCATTCCCGCAGCAGTTTTGTTCCTCGCGTGTGATAACAGCAG
CGCTCCCGCCTGCATTTCTTGTTGCCGTAGAATCGGTTAGAATGAAGCGG
GGCTGTAAGGCGCTCAAAACCTTGAACCTTGCACTTGCGTCACTCCCGCT
TGCTCTCCCTGCCGCTCTGTATGTACACCGCCACCGCCGCCGCCGCCGAA
AACTCCATCTACTGCAAACCAACAGCGACGGAGACGACGGCGCGAGCTCC
CTGGCGAGCTTCGCCCAGTCCGACGCCGCCTCGGACGCGGGCAGCGACGT
CAGCGGCGTGAGCAGCAGGTCCGGCGCTACCTGGATGACAGAGGGCGGCG
GCGGGCGCTACGGCAGCAGCGGCCAGCACCCCGGAAGGGGCACCGCGCCC
CTGCGGCGAGCGGCGAGCGTCGCCTCCTCCTCCTCGCACGGCCGCCGCAC
TAGCCGCCCGTCGGACCGCCGGCGCCGATTCGGCGGGTCCGCGGCGGGCT
CGGTTAGGGGCGGGCTCGAGCAGAGGCCGCCACCGCTGACGATGCAGGCT
GGCGCCGCGGGCGGAGGCGGAGGCGGCG back to topCoding sequence (CDS) from alignment at C-linearis_contig11:3644143..3645520- >mRNA_C-linearis_contig11.1414.1 ID=mRNA_C-linearis_contig11.1414.1|Name=mRNA_C-linearis_contig11.1414.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1416bp|location=Sequence derived from alignment at C-linearis_contig11:3644143..3645520- (Chordaria linearis ClinC8C monoicous)
CCGGACAACCGAAACGCCCCGGAGGTTGTGCCGGAGAGGGCCATGTCCGC
GTCGGGCCGGCTGCTCTCGCCGACGCCGAGCAGTGGCGGGTACAGCGGGT
ACGGAGGTGGCGGTCGGCTAGAGTCGTATGGGGCCGTTGAGGGCGGGGGC
GACGGCGGCGGCGGCGGCGGTGGTGGTGGTGGTCTTGGCGGCGGGATCTC
GGGGAAGATCAAGTGGTGGCTAGACCGCGGGGGTGCCGAGGAGGGTGGTT
CGTCCCCTCGCGGCGGTGGGCGAGCAGTAGGGCCGGACAACCGAAACGCC
CCGGAGGTTGTGCCGGAGAGGGCCATGTCCGCGTCGGGCCGGCTGCTCTC
GCCGACGCCGAGCAGTGGCGGGTACAGCGGGTACGGAGGTGGCGGTCGGC
TAGAGTCGTATGGGGCCGTTGAGGGCGGGGGCGACGGCGGCGGCGGCGGC
GGTGGTGGTGGTGGTCTTGGCGGCGGGATCTCGGGGAAGATCAAGTGGTG
GCTAGACCGCGGGGGTGCCGAGGAGGGTGGTTCGTCCCCTCGCGGCGGTG
GGCGAGCAGTAGGGGGTACGTCGTCGCCGGCGTCCCCCGTGTCGGTTTCC
ACTGCCAGGAGCGGCCGAACCAATTGGTGGGAAGACAGGGTACGTCGTCG
CCGGCGTCCCCCGTGTCGGTTTCCACTGCCAGGAGCGGCCGAACCAATTG
GTGGGAAGACAGCGACGGAGACGACGGCGCGAGCTCCCTGGCGAGCTTCG
CCCAGTCCGACGCCGCCTCGGACGCGGGCAGCGACGTCAGCGGCGTGAGC
AGCAGGTCCGGCGCTACCTGGATGACAGAGGGCGGCGGCGGGCGCTACGG
CAGCAGCGGCCAGCACCCCGGAAGGGGCACCGCGCCCCTGCGGCGAGCGG
CGAGCGTCGCCTCCTCCTCCTCGCACGGCCGCCGCACTAGCCGCCCGTCG
GACCGCCGGCGCCGATTCGGCGGGTCCGCGGCGGGCTCGGTTAGGGGCGG
GCTCGAGCAGAGGCCGCCACCGCTGACGATGCAGGCTGGCGCCGCGGGCG
GAGGCGGAGGCGGCCGACGGAGACGACGGCGCGAGCTCCCTGGCGAGCTT
CGCCCAGTCCGACGCCGCCTCGGACGCGGGCAGCGACGTCAGCGGCGTGA
GCAGCAGGTCCGGCGCTACCTGGATGACAGAGGGCGGCGGCGGGCGCTAC
GGCAGCAGCGGCCAGCACCCCGGAAGGGGCACCGCGCCCCTGCGGCGAGC
GGCGAGCGTCGCCTCCTCCTCCTCGCACGGCCGCCGCACTAGCCGCCCGT
CGGACCGCCGGCGCCGATTCGGCGGGTCCGCGGCGGGCTCGGTTAGGGGC
GGGCTCGAGCAGAGGCCGCCACCGCTGACGATGCAGGCTGGCGCCGCGGG
CGGAGGCGGAGGCGGC back to top
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