mRNA_C-linearis_contig11.1411.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: D8LKH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH4_ECTSI) HSP 1 Score: 296 bits (758), Expect = 2.290e-100 Identity = 141/161 (87.58%), Postives = 151/161 (93.79%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQVDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVM 483
MRGKLK IQ+YITSLEYNYTGE FFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMA+VDRFPVCFRSSL GRVYRHI+LAVRSG WG+LGLSRRD LMYKELKY LFS+L+GDFR+SYA SWHRLE +WVGFPLPHDISSNV +KWKV+
Sbjct: 1 MRGKLKHIQSYITSLEYNYTGEAFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAEVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDKLMYKELKYDLFSKLVGDFRESYASSWHRLEQVWVGFPLPHDISSNVAIKWKVL 161
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A6H5JJ50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ50_9PHAE) HSP 1 Score: 255 bits (651), Expect = 8.270e-84 Identity = 127/175 (72.57%), Postives = 137/175 (78.29%), Query Frame = 1
Query: 49 YNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQ------------------------------VDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVM 483
YNYTGE FFVKKKDRGFRHVTSTAK IIREALPIQCVEAVFVGAYLTADMA+ VDRFPVCFRSSL GRVYRHI+LAVRSG WG+LGLSRRDTLMYKELKY+LFS+L+GDFR+SYA +WHRLE +WVGFPLPHDISSNV VKWKV+
Sbjct: 5 YNYTGEAFFVKKKDRGFRHVTSTAKQIIREALPIQCVEAVFVGAYLTADMAEAGPLFFQTLADSSTLSPYLRRFLLPGYMVGVDRFPVCFRSSLDGRVYRHIVLAVRSGGKWGSLGLSRRDTLMYKELKYELFSKLVGDFRESYASNWHRLEQVWVGFPLPHDISSNVAVKWKVL 179
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A835YRP7_9STRA (Vasohibin-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRP7_9STRA) HSP 1 Score: 190 bits (483), Expect = 5.020e-58 Identity = 87/160 (54.37%), Postives = 117/160 (73.12%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQVDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKV 480
+R KLK +Q YI + EYN+TG+ ++ KK RGF HV + A+ I+REALPIQCVEA F+GAYLT D+ V+R+P+ F+S+L G +RHI+LAV SG WGALG+SRRD L YKELKY L+ +F +Y WH+L+ I++G PLP + S N P++WKV
Sbjct: 31 LRDKLKQLQKYIEAFEYNHTGKCYYSTKKFRGFAHVANVAQDIMREALPIQCVEATFLGAYLTCDLRDVERYPLSFKSALEGHEHRHIVLAVTSGGKWGALGISRRDCLAYKELKYSSLGALVAEFAAAYTSCWHQLQAIYLGLPLPRNPSCNAPIRWKV 190
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A1W0A7K4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7K4_9STRA) HSP 1 Score: 185 bits (469), Expect = 4.500e-53 Identity = 95/210 (45.24%), Postives = 128/210 (60.95%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTAD----------MAQVDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
+R KL IQ Y+ +LEYNYTG+ +F K R ++ + TAK II E+LPIQC+EAVFV AYLTA+ QVDR P+ F+S GG V+RHI+L ++ +WGALGLSR LM KELKYK FSEL+ D+ + +A H + I+VGFP HDI S+ V+W+V+ + + W + A D F S L G++PD
Sbjct: 38 VRSKLHAIQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIIHESLPIQCLEAVFVAAYLTANGNTEYEGMNPNQQVDRVPISFKSRSGGTVFRHIVLGIKHQHMWGALGLSRNADLMNKELKYKNFSELLADYIEHFAKCCHEVTKIYVGFPFSHDIHSSEKVQWRVLNIKI-SDHPWDAVAAQFDLFTREHSELMSHLHRVGELPD 246
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A2D4BXV4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BXV4_PYTIN) HSP 1 Score: 184 bits (466), Expect = 6.090e-53 Identity = 93/200 (46.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQVDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
++ +L +Q Y+ SLEYNYTG +F K+R F+ + +TAK I E LPIQC+EAVF+ AY+TA+ ++RFP+ F+S G V+RHI+LAVR WGALGLSR + LMYKEL++ SEL DF + H + + VGFP PHDI S+ V+W+V+ V T EWS A +LD A L G MPD
Sbjct: 42 IKTRLMAVQNYLNSLEYNYTGTLYFDVNKNRSFKSIVNTAKEIAAEMLPIQCLEAVFLAAYITANFPDLERFPLSFKSQAGNSVHRHIVLAVRHQNKWGALGLSRSERLMYKELRFNSLSELTQDFCHGFESVCHVVTKLHVGFPFPHDIHSSEKVEWRVLNVPVDT-VEWSHVATHLDAXAKEAGDLLAFRRAKGAMPD 240
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: K3X8V2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8V2_GLOUD) HSP 1 Score: 181 bits (460), Expect = 6.220e-53 Identity = 93/194 (47.94%), Postives = 127/194 (65.46%), Query Frame = 1
Query: 22 IQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQVDRFPVCFRSSLGGRVYRHIILAVR-SGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
IQ I +LEYNYTG ++F K+R F+ + STAK I+ E LPIQC+EAVF+ +YLTA+ + ++RFP+ F+S G V+RHIILAVR WGALGLSR D LMYKELKY SEL+ DF + +HR+ ++VGFP HDI S+ V+W+VM ++ EW+ AA + D F A + + G +P+
Sbjct: 46 IQHVINTLEYNYTGTQYFDVNKNRSFKSIVSTAKDIVNETLPIQCLEAVFLASYLTANASDLERFPISFKSIAGTNVHRHIILAVRYQHNKWGALGLSRSDKLMYKELKYASLSELIQDFCHEFELLYHRVLKVYVGFPFSHDIHSSEKVEWRVMNISLEFN-EWTDAAQHFDSFAKDAVDILAYKKSKGVLPE 238
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A1V9ZEI7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZEI7_9STRA) HSP 1 Score: 183 bits (464), Expect = 2.710e-52 Identity = 92/210 (43.81%), Postives = 129/210 (61.43%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTAD----------MAQVDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
++ KL IQAY+++LEYNYTG +F K+R ++ + TAK II EALPIQC+EAVFV AYLTA Q+DR P+ F+S G +RHI+L VR VWGALGLSR LM K+LKYK FS+L+ D+ +++ H++ ++VGFP HDI S+ V+W+V+ + W + A +D F +S L G++PD
Sbjct: 40 IKAKLHAIQAYLSALEYNYTGRLYFNVNKNRSYKSIYGTAKEIISEALPIQCLEAVFVAAYLTAHGMPEYEGLNPSQQIDRVPISFKSRSGDSTFRHIVLGVRHQHVWGALGLSRSPALMNKDLKYKSFSDLVADYIENFVKCQHQVTKVYVGFPFSHDIHSSEKVQWRVLNIKI-VEHPWEAVAAQIDLFTRESSELMSHLHRVGELPD 248
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A067CTS0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CTS0_SAPPC) HSP 1 Score: 178 bits (452), Expect = 1.420e-50 Identity = 88/210 (41.90%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTAD----------MAQVDRFPVCFRSSLGGRVYRHIILAVRSGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
++ KL +Q Y+ +LEYNYTG+ +F K R ++ + TAK I+ EALPIQC+EAVFV AYLTA Q++R P+ F+S+ GG V+RHI+L V+ +WGALGLSR +LM K+LKYK FSEL+ D+ ++++ H + I+VGFP HDI S+ V+W+V+ + W + A D F+ +S + G++P+
Sbjct: 36 IKTKLHAVQTYLNALEYNYTGKLYFNVNKHRSYKSIYGTAKEIMAEALPIQCLEAVFVAAYLTAHGMPEYEGMNPSHQIERVPISFKSTSGGSVFRHIVLGVKHQHLWGALGLSRNPSLMNKDLKYKHFSELLADYVENFSKCHHTVTKIYVGFPFSHDIHSSEKVQWRVLNIKISEHP-WDAVAGQFDLFLRESSEIMSHLHRVGELPE 244
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A5D6XNG0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNG0_9STRA) HSP 1 Score: 179 bits (454), Expect = 1.600e-50 Identity = 95/201 (47.26%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQVDRFPVCFRSSLGGRVYRHIILAVRSGKV-WGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
M+ +L IQ I++LEYNYTG +F K+R F+ + STAK I+ E LPIQC+EAVF+GAYLTA +++RFP+ F++ GG V+RHI+LAVR WGALGLSR + LM KELKY SEL+ DF +A +H + ++ GFP HDI S+ V+W+VM + A W+ AA +LD F A + G++PD
Sbjct: 39 MKTRLAAIQHVISTLEYNYTGTLYFDVTKNRSFKSIVSTAKDILNEVLPIQCLEAVFLGAYLTASAPELERFPISFKTVAGGCVHRHIVLAVRHQHAKWGALGLSRSEKLMAKELKYASLSELVQDFCREFALLFHAVLKVYAGFPFSHDIHSSEKVEWRVMNLPL-EHATWADAAQHLDAFSKEALDILAFKRAKGELPD 238
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Match: A0A024G7K7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G7K7_9STRA) HSP 1 Score: 174 bits (442), Expect = 3.760e-49 Identity = 89/205 (43.41%), Postives = 127/205 (61.95%), Query Frame = 1
Query: 1 MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIQCVEAVFVGAYLTADMAQVDRFPVCFRSSLGGRV-YRHIILAVR----SGKVWGALGLSRRDTLMYKELKYKLFSELMGDFRDSYAGSWHRLEHIWVGFPLPHDISSNVPVKWKVMRANVGTGAEWSSAAPNLDCFVACASTLFERFSTTGKMPD 600
+R KL +IQAY+ +LEYNYTG +F K+R F+ + TAK++I +ALPIQC+EAVF+ +YLTA + +VDRFPV F S G + +RHI+LAVR WGALGLSR D LMYKE + S+L+ D+++S+ +H+L + +G PL HDI S V+W+++ ++ W A +D F A L G P+
Sbjct: 40 IRAKLHMIQAYLNALEYNYTGTLYFDTNKNRSFKSIVGTAKVMINDALPIQCLEAVFLASYLTAPLLKVDRFPVSFTSITGEKSKHRHIVLAVRYYENQNANWGALGLSRSDQLMYKEANFSTLSDLLNDYKNSFENVYHQLIKMSIGLPLSHDIHSAEKVQWRMLNVHLDK-TNWKQVARQIDLFARDAVNLVGYKKAQGSFPE 243 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1411.1 >prot_C-linearis_contig11.1411.1 ID=prot_C-linearis_contig11.1411.1|Name=mRNA_C-linearis_contig11.1411.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=208bp MRGKLKLIQAYITSLEYNYTGEEFFVKKKDRGFRHVTSTAKLIIREALPIback to top mRNA from alignment at C-linearis_contig11:3633250..3636411- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1411.1 ID=mRNA_C-linearis_contig11.1411.1|Name=mRNA_C-linearis_contig11.1411.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3162bp|location=Sequence derived from alignment at C-linearis_contig11:3633250..3636411- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:3633250..3636411- >mRNA_C-linearis_contig11.1411.1 ID=mRNA_C-linearis_contig11.1411.1|Name=mRNA_C-linearis_contig11.1411.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at C-linearis_contig11:3633250..3636411- (Chordaria linearis ClinC8C monoicous)back to top |