mRNA_C-linearis_contig11.1348.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig11.1348.1
Unique NamemRNA_C-linearis_contig11.1348.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: A0A6H5KLI3_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLI3_9PHAE)

HSP 1 Score: 215 bits (547), Expect = 8.570e-62
Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 1 
Query:  109 RREGTFFGDPGARGNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPE--GSYGGGG 447
            RR+GTFFGDPG RGNGPPNIEGM+TLKVDNVPYNSSIDDLRR+FEK+G LGD+Y PRDLRTGEPRGFAFVRF+DQRDADDA+DRMDGEFFAGRELRIQYAKKRRPE  G YGGGG
Sbjct:    4 RRDGTFFGDPGMRGNGPPNIEGMITLKVDNVPYNSSIDDLRRIFEKYGELGDVYMPRDLRTGEPRGFAFVRFMDQRDADDAIDRMDGEFFAGRELRIQYAKKRRPEASGGYGGGG 118
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: A0A6H5KI74_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI74_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 8.410e-38
Identity = 71/100 (71.00%), Postives = 84/100 (84.00%), Query Frame = 1 
Query:  145 RGNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYGGG 444
            RG+GPPNI+GMVTLKVDN+ +  S ++LR VFE  G LGD+Y PRD+RTGEPRGFAFVR++D+RDADDAVDR+DG  F GRELRIQYA+KRRP G   GG
Sbjct:   12 RGSGPPNIDGMVTLKVDNIAFTCSPEELREVFEGCGKLGDVYIPRDMRTGEPRGFAFVRYLDKRDADDAVDRLDGTRFNGRELRIQYARKRRPGGGGSGG 111
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BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: A0A6S7FVA8_PARCT (Serine arginine-rich splicing factor 2 n=2 Tax=Alcyonacea TaxID=40677 RepID=A0A6S7FVA8_PARCT)

HSP 1 Score: 131 bits (329), Expect = 1.450e-31
Identity = 57/97 (58.76%), Postives = 77/97 (79.38%), Query Frame = 1 
Query:  145 RGNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSY 435
            RG GPPNIEGM +LKVDN+ Y +++DDL++VF  +G++GD+Y PRD RT + RGFAFVRF ++RDA+DA+DR+DG    GRE+R+Q AK  RP+  Y
Sbjct:    5 RGRGPPNIEGMTSLKVDNLTYRTTVDDLKKVFRAYGDVGDVYIPRDARTNQSRGFAFVRFFERRDAEDAMDRVDGSVLDGREIRVQNAKYGRPQSDY 101
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: V3ZXL2_LOTGI (RRM domain-containing protein (Fragment) n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3ZXL2_LOTGI)

HSP 1 Score: 125 bits (314), Expect = 4.820e-30
Identity = 59/99 (59.60%), Postives = 75/99 (75.76%), Query Frame = 1 
Query:  142 ARGNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYG 438
            +RGNGPP+ +GMV+LKVDN+ Y +  DDL+R FEK+G++GDIY PRD  T E RGFAFVRF D+RDA+DA+D MDG    GR+LR+Q A+  RP    G
Sbjct:    1 SRGNGPPSTDGMVSLKVDNLTYRTRPDDLKRAFEKYGDVGDIYIPRDRITKESRGFAFVRFFDKRDAEDAMDSMDGAMMDGRDLRVQMARYGRPTNQRG 99
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: UPI00083C4B05 (serine/arginine-rich splicing factor 2 isoform X2 n=1 Tax=Nicrophorus vespilloides TaxID=110193 RepID=UPI00083C4B05)

HSP 1 Score: 124 bits (312), Expect = 1.410e-29
Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 1 
Query:  148 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYGGGGH 450
            G  PP IEGMV+LKVDN+ Y ++ DDLRRVFE+ G +GDIY PRD  T E RGFAFVRF D+RDA DA+D MDG    GRELR+Q A+  RP   +  GGH
Sbjct:    4 GRPPPRIEGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAQDALDAMDGRMLDGRELRVQMARYGRPTSPHRRGGH 104
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: T1J1U9_STRMM (RRM domain-containing protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1J1U9_STRMM)

HSP 1 Score: 125 bits (314), Expect = 2.150e-29
Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 1 
Query:  148 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSY 435
            G GPPNIEGM +LKVDN+ Y ++ +DLRR FEK+G +GD+Y PRD  T E RGFAFVRF D+RDA+DA++ MDG+   GRELR+Q A+  RP   Y
Sbjct:    4 GRGPPNIEGMTSLKVDNLTYRTTPEDLRRAFEKYGEVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALEAMDGQMLDGRELRVQMARYGRPSDPY 99
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: A0A2R7WMQ6_ONCFA (RRM domain-containing protein n=1 Tax=Oncopeltus fasciatus TaxID=7536 RepID=A0A2R7WMQ6_ONCFA)

HSP 1 Score: 123 bits (309), Expect = 2.440e-29
Identity = 61/100 (61.00%), Postives = 73/100 (73.00%), Query Frame = 1 
Query:  148 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYGGGG 447
            G  PP I+GMV+LKVDN+ Y ++ DDLRRVFE+ G +GDIY PRD  T E RGFAFVRF D+RDA+DA+D MDG    GRELR+Q A+  RP   Y  GG
Sbjct:    4 GRPPPRIDGMVSLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRFTRESRGFAFVRFYDKRDAEDALDAMDGRMLDGRELRVQMARYGRPSSPYRRGG 103
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: UPI001B88AFA6 (serine/arginine-rich splicing factor 2-like isoform X1 n=2 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88AFA6)

HSP 1 Score: 124 bits (312), Expect = 2.480e-29
Identity = 58/98 (59.18%), Postives = 76/98 (77.55%), Query Frame = 1 
Query:  148 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYGG 441
            G GPPN EGM++LKVDN+ Y ++ ++L+R FEK+G++GD+Y PRD  T E RGFAFVRF D+RDA+DA+D MDG  F GRELR+Q A+  RP+   GG
Sbjct:    4 GRGPPNSEGMISLKVDNLTYRTTPENLKRAFEKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDAMDSMDGAIFDGRELRVQTARYGRPDTRRGG 101
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: T1G9I7_HELRO (RRM domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G9I7_HELRO)

HSP 1 Score: 123 bits (309), Expect = 2.510e-29
Identity = 56/101 (55.45%), Postives = 73/101 (72.28%), Query Frame = 1 
Query:  145 RGNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYGGGG 447
            R NGPP+ E + +LKVDN+ + ++++ LR+ FEK+G +GD+Y PRD  T E RGF FVRF D+RDA+DA+D MDG    GRELR+Q AK  RP   YGG G
Sbjct:    4 RYNGPPDTESLFSLKVDNLTFRTTVESLRKAFEKYGEIGDVYIPRDRYTQESRGFGFVRFYDERDAEDAIDGMDGRIMDGRELRVQLAKHPRPPNRYGGSG 104
[Close]
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Match: A0A674N753_TAKRU (Serine/arginine-rich splicing factor 2 n=3 Tax=Takifugu TaxID=31032 RepID=A0A674N753_TAKRU)

HSP 1 Score: 125 bits (314), Expect = 3.380e-29
Identity = 60/100 (60.00%), Postives = 76/100 (76.00%), Query Frame = 1 
Query:  148 GNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFGNLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQYAKKRRPEGSYGGGG 447
            G  PP++EGMV+LKVDN+ Y ++ + LRRVFEK+G +GD+Y PRD  T E RGFAFVRF D+RDA+DA+D MDG    GRELR+Q A+  RP  S+ GGG
Sbjct:    4 GRPPPDVEGMVSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGGG 103
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1348.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KLI3_9PHAE8.570e-6288.70RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5KI74_9PHAE8.410e-3871.00RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6S7FVA8_PARCT1.450e-3158.76Serine arginine-rich splicing factor 2 n=2 Tax=Alc... [more]
V3ZXL2_LOTGI4.820e-3059.60RRM domain-containing protein (Fragment) n=1 Tax=L... [more]
UPI00083C4B051.410e-2961.39serine/arginine-rich splicing factor 2 isoform X2 ... [more]
T1J1U9_STRMM2.150e-2960.42RRM domain-containing protein n=1 Tax=Strigamia ma... [more]
A0A2R7WMQ6_ONCFA2.440e-2961.00RRM domain-containing protein n=1 Tax=Oncopeltus f... [more]
UPI001B88AFA62.480e-2959.18serine/arginine-rich splicing factor 2-like isofor... [more]
T1G9I7_HELRO2.510e-2955.45RRM domain-containing protein n=1 Tax=Helobdella r... [more]
A0A674N753_TAKRU3.380e-2960.00Serine/arginine-rich splicing factor 2 n=3 Tax=Tak... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig11contigC-linearis_contig11:2994381..3000699 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score214.5
Seed ortholog evalue6e-53
Seed eggNOG ortholog2880.D7FM62
KEGG koko:K12891
KEGG Pathwayko03040,ko05168,map03040,map05168
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0031974,GO:0031981,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363
EggNOG free text desc.regulation of RNA splicing
EggNOG OGsKOG4207@1,KOG4207@2759
Ec32 ortholog descriptionSR RNA splicing protein
Ec32 orthologEc-16_004930.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03041
Exons7
Model size1784
Cds size819
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927462.2866144-UTR-C-linearis_contig11:2994380..29944311622927462.2866144-UTR-C-linearis_contig11:2994380..2994431Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2994381..2994431 +
1690879714.7404895-UTR-C-linearis_contig11:2994380..29944311690879714.7404895-UTR-C-linearis_contig11:2994380..2994431Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2994381..2994431 +
1622927462.2990801-UTR-C-linearis_contig11:2995064..29951151622927462.2990801-UTR-C-linearis_contig11:2995064..2995115Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2995065..2995115 +
1690879714.7543254-UTR-C-linearis_contig11:2995064..29951151690879714.7543254-UTR-C-linearis_contig11:2995064..2995115Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2995065..2995115 +
1622927462.37618-UTR-C-linearis_contig11:2999836..30006991622927462.37618-UTR-C-linearis_contig11:2999836..3000699Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2999837..3000699 +
1690879714.8193622-UTR-C-linearis_contig11:2999836..30006991690879714.8193622-UTR-C-linearis_contig11:2999836..3000699Chordaria linearis ClinC8C monoicousUTRC-linearis_contig11 2999837..3000699 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927462.3103578-CDS-C-linearis_contig11:2995115..29951621622927462.3103578-CDS-C-linearis_contig11:2995115..2995162Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2995116..2995162 +
1690879714.7628496-CDS-C-linearis_contig11:2995115..29951621690879714.7628496-CDS-C-linearis_contig11:2995115..2995162Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2995116..2995162 +
1622927462.323346-CDS-C-linearis_contig11:2995611..29957071622927462.323346-CDS-C-linearis_contig11:2995611..2995707Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2995612..2995707 +
1690879714.771142-CDS-C-linearis_contig11:2995611..29957071690879714.771142-CDS-C-linearis_contig11:2995611..2995707Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2995612..2995707 +
1622927462.3329673-CDS-C-linearis_contig11:2997573..29977301622927462.3329673-CDS-C-linearis_contig11:2997573..2997730Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2997574..2997730 +
1690879714.7794907-CDS-C-linearis_contig11:2997573..29977301690879714.7794907-CDS-C-linearis_contig11:2997573..2997730Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2997574..2997730 +
1622927462.34385-CDS-C-linearis_contig11:2998323..29984751622927462.34385-CDS-C-linearis_contig11:2998323..2998475Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2998324..2998475 +
1690879714.788358-CDS-C-linearis_contig11:2998323..29984751690879714.788358-CDS-C-linearis_contig11:2998323..2998475Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2998324..2998475 +
1622927462.3553674-CDS-C-linearis_contig11:2998818..29990741622927462.3553674-CDS-C-linearis_contig11:2998818..2999074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2998819..2999074 +
1690879714.8025475-CDS-C-linearis_contig11:2998818..29990741690879714.8025475-CDS-C-linearis_contig11:2998818..2999074Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2998819..2999074 +
1622927462.3649-CDS-C-linearis_contig11:2999725..29998361622927462.3649-CDS-C-linearis_contig11:2999725..2999836Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2999726..2999836 +
1690879714.8114247-CDS-C-linearis_contig11:2999725..29998361690879714.8114247-CDS-C-linearis_contig11:2999725..2999836Chordaria linearis ClinC8C monoicousCDSC-linearis_contig11 2999726..2999836 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig11.1348.1prot_C-linearis_contig11.1348.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig11 2995116..2999836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig11.1348.1

>prot_C-linearis_contig11.1348.1 ID=prot_C-linearis_contig11.1348.1|Name=mRNA_C-linearis_contig11.1348.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=273bp
MSRREGTFFGDPGARGNGPPNIEGMVTLKVDNVPYNSSIDDLRRVFEKFG
NLGDIYCPRDLRTGEPRGFAFVRFIDQRDADDAVDRMDGEFFAGRELRIQ
YAKKRRPEGSYGGGGHGGGYGGGGGRYGGRDDRRDDYRRSSRYSRSRSRS
RDHRRRRSRSASPRRRSRSRSPGRRRSRRSRSRSRSRSPPSRRRSRSPPR
HRDGSAEVGGSSRRGRDRRDSSVDGGGGRDRERDNEGHRKADKQNGFRDS
SPPMNGDDRARRNSDAGSPSPR*
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mRNA from alignment at C-linearis_contig11:2994381..3000699+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig11.1348.1 ID=mRNA_C-linearis_contig11.1348.1|Name=mRNA_C-linearis_contig11.1348.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6319bp|location=Sequence derived from alignment at C-linearis_contig11:2994381..3000699+ (Chordaria linearis ClinC8C monoicous)
TGTGGCAGCACACGCCTGTCGAGAACGAGAGAGCCACCAACGTGAAGAGA
GGTATGGATATCGAGTGAAAGGATTGAAGCGGGTATGCTTAGAGGGGGGT
CTGTGGGTGTTTGTTGATCCAGTAGACTGGTGTTCGTCTCTGTCTTTTCC
CACCGTGTGAAGGTTGTGTTTCTGGCCATTCCACGAAATCGATCCCATCC
GGTACGTCGACGCGGACGTAGTCTTCCGGATCAACATGAACAGGCACGAA
AGGGGCGGTTTCCTTGCAGATGATAGTCCAGGACGGGCGAAAATGGCTTC
CTGGGCGTGCTTGATCATCACCCGTTTATTTTTTATTTATCTCTTTGGAT
CCTCTTCAAAATGTAGTTAGAAAACGATGTGTCGAGCAGGTGCGCCATCG
AAAAAGAAGGTGTATTCCATGGCTAGGTCAGGGGCGGCGAGAGTTTTTGA
TAGCTTCTCCTGCCAAATCGATGATCATCTCTGCGTTTCCGCCCTCACAC
TTACCGCTGAAATCTGTTTCTAACTGTTTGCTGCATGGTGCTACTACACG
CCGTTCGATCCCACTCTCTCACGCCTACAATACGAAACACCTCGCTGGTG
TACCGTGTACCATATACCCGCCGCGCGTCCCTCCTATCCTGCCCCCGCGG
CCTCTGTCCTCTCTTCCGAACCTCGCCGAGGCAGGCGCCGCACCGTCTTT
TTCTATTTGAATCTGCAAAATCAAGCTTCCCCAAGATGAGCCGCCGTGAA
GGGACTTTCTTCGGCGACCCCGGCGCGAGGGGGTGAGGGAAGAATGCTAC
ATACTTAACACCAGAAGCGGTAGTTAATGTAACCAAACATTGACGTTTCA
CGAAACATGGTTAAACAGCAGCGAACTTAGCTTGACATGGTGTTGGAATG
TTAACGTTTACGCCCTCCGCTGCGTGTGCTTGCACACAGCAGAGCAGTCC
ATATTTAAAGGCGTGTAGTGGGGAGAAGTGGTTGGCTGCGTTTGCTGTTA
TTGTTACGCCGGTGTCTCCACGTGTTTTGCCTGCTGCGTAGCATTGTGTC
CGTGTCCACCCCGGCGTACTTTGCACTGGTTTCTGCCGGCTACAGCAGCT
TCTTGTTATGATGGAAGTAATAGTACTCGGGTTGATTCCACATGGTAGTT
GCACCTAACTCCACCATGTTCCTATCTGTGTCTCTATTTCGTCCCTCATG
GCCACGTGTGACCTTTTAACACCACACGCAGGAATGGCCCCCCCAACATC
GAGGGCATGGTCACCCTCAAGGTGGACAACGTGCCCTACAACTCCAGCAT
CGATGACCTCCGGCGCGTCTTCGAGAAGTGAGATCCGCTTGATTTAGAGA
GTGGCAAAACCATCCATCACTATACGTCGCTTAGAGAGTGCACTGCTGCT
CTGTGCTTTGTCGACCAGAGGATGAACGCAACCAACGTGACGATGCAACG
CGCAGAAAACCGTTTGAGCCTAATCTTGTCGCCTAGCGACTGCACTGGCG
CAAATAGAAGCCCGACAGCCTACTACTACCTTGCGGTACCTGCAGATGCT
ACATTGTGCACTGTGCATAAATATCCAGGTGATTTCACGGTACAGCAGTA
CAGCAGTAGCTGTCGCGGTTTCGGATTGGGCTCTTTGATTGACCCTCGCT
ACCATCTAATATCACACTCAACTGCTGCAGTGTCTGATGACCTGTGTCGT
ATTTTGTTCATTCGCGCATTTTCGGCACTATTGTATTGCGCCACTTTTTT
TTTTCTGTTCGTAGCAGAGGCGCCAGTTACCGGTGCTACAACTGTGTCCG
TGTCCGTGGCCGTGGCCGTGTCCTGCCGCGGTGATGGTGTCGTGTTCGTG
TTCGTGTTCGTGTTCGTGTTCGTGTCCCGTCCTGTCGGGTCCTGTCCTGT
CCTGCCCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGC
AAATCACGTGCCGGCGAAAACAAGCTCGAGCTGAGAAGATGGTGTGGTGT
GGTGGTATGCCTTCGAGTAGCTGGGCGGCAACCGAAGAACGATGTTTTTT
TCTTGACCAGACCGACACAAAGCAGCTTTGACGAGGTGGTCGCGACGATC
GATGATTGATAATCGGTGGCGATGGTGATGGTGATGGTGATCGAGGGTGG
GCACCCCGAGGCTGCTGAGACTGAGATAAACGACGCAGAGAGCAAACATC
CTGAGAGAGTGGACCCACAAAGAGAGGGACAAAAGAGTCGATCGATCGAG
TCTGGTGCCGCTGTTCTGATTCTGTGATCCTGATCCTGATCCTGATCCTG
ATCCTGATCCTGATCCTGATCCTGATCCTGATCCTGATCCGGACATGATC
CCGACGAGCTGATCGAGCTTCAGAAATCGACGAGCGCAACCGAAAGAACC
GGGAAGAGAAAAGAAGTACAGACCTGCGTCGTCGTGTGATGTGATCTCAT
CTCATATCATCTCAGCTCAGCTCATCATCACGTGACACATGATTTAGTGA
ACGTGAACGTGGCCGTGAGCGTGAACGTGAACGTTGGTGGTCGGGGAAGA
GTCGTTGATGGGACGTTTTGATCGGTGGCTGCGCGCCCCGCCCCGAGTGA
TTTGAGGTAAAGTGCCTCCTCCCCTCCTGGTGTGTGGTAGAACACTACAT
CAGAACAACATCTGTTGTTTTTGAAGGATGGATGCCCGGTTTCGCTCGGC
AGGATTCTACCCGAGAATTGCGCTAACTAGCACGTTTGCTTCTTTCTGTT
TTTTGCAGTGGTAAGAGAGTGGGCAGAGCTTCGCCGCTCGCCGTTTCCTT
TCGTCGAGCTACGTGGGAGAAGAGCGTAGTTGGACCGCGTTCATGGAAGA
CGTGCACGTGTCTTTGCCCCCTCCCCTCCCCCCCCGTGGTCTTGTTGAGT
GCGATCCACGTCGAATGTCAGACGTTAGCGAGGATGTTTCGTTTCTCTAT
CGCGTTTTTTTGGTCCTTGTGGCTGTGATCTCTCGCTGCTCTCTAACTGC
TCCTTTCTTGTGATGGCAAATGAAGCGAAGCTGAAGCGTACTGACCGCGC
GTGCTTGCTTGTCTTCTCTTGCCAAGTGGGAAAATGCTTCGCTTTTCGCC
CAATCCAGCGTTCGGTGTCATCCACCTTTTAACCCGTCCCCCCCCCCCCC
CCCCCCTCCGACCTACACCGCTGTCCTTGTTTTGTTTTCGAAGGTTCGGA
AACCTCGGGGACATCTACTGCCCGCGGGACCTTCGCACGGGCGAGCCGAG
GGGCTTCGCGTTCGTGCGCTTCATAGACCAGCGCGACGCTGACGACGCCG
TCGACCGCATGGATGGCGAGTTCTTCGCCGGCCGGGAGCTTCGAATCCAG
GTCAGTTGGTTGGTGGGCTGGCTCCCATTTTGGATACCTTCCAGCGTAGG
ATTTTGTGGCGTCTTTCGTTTCACGCTCGTGTGTGGTCCACGCGGCATTC
CAAATGGAAGCGAAGGCCCGTTTCCTTTTTTTGCCGTGGATTTGGGAAGG
CTTCGTTGCTGCCGGGGTTGCCGGGCCTCCGTCTCGCCTTGCTCTCGTTC
AGCTGATCGCTTTGCGACCTTAGTGTTTGTCTTGGCCTTTTGGCGATCAC
GGAGATCACGGTAAGACGATGGTTAGTTTTTACAGCACTCCCATGGTACG
ACACGATCTGGGCGACAGGGCAGCCCAATAGGCATCCATCGACCTATCAA
ACGATTGCGTTCCTGCCACCCAGGGTCTCAACTTGCCCGTGAATCCATCA
GTCAGTGCCACATCGTGATACTTCAACTAAACAGCTAATCCACACTCACG
CAGTCGCCCGATATTCCCTGTACCGTCTTGTCTTCATGTCCTACTTCGTA
TTCACTCACGCCCTTAGTCCGGAAAGGTACCTGATTGGCGTCCTCTGAAC
CCTGCGAAACTCTGATTTTTTGGCATGTGCCTTACGTGCGCAGTACGCTA
AGAAGAGGAGGCCCGAGGGGAGCTACGGAGGTGGAGGGCACGGCGGCGGA
TACGGTGGTGGAGGGGGGCGGTACGGAGGTCGTGACGACAGGCGCGATGA
CTACCGCCGTTCCAGCCGCTACAGCCGCAGCCGCAGCCGCTCCAGGTGAA
CAGTTTTGTTAACAACGCAACCAGCCGGCATTTTGATTCGCAGTCCTGCA
GCGCCCGCTGTTGCGGTGTTCTGTTTCCGGAGTCTGATTGCGGCGTGCCG
AACCGAGCACGTGGGGCGGCACGAATCCAGCTGCTGAGAGCCAAGCCCGA
CTTCCACCATCCGTCGCCGATATCTTGCTCCGTCTTCACGAAAGCTGCGG
GTGTTTATCAAAGCACACATACATGCTATAGCCCCGTCCCCCGACAACAC
CTCATGGCGCATTCTTCCGTTTTATCCCGCCCTTCGACCCGCACCCCACA
ACCCTACCCCCCCCCTCCCCCCCGGCGCGCATCAGCAGGGACCACCGCCG
CCGCCGCTCTAGGAGCGCTTCCCCTCGCCGCCGCTCGCGGTCCCGCTCTC
CGGGGCGCCGCCGCAGCCGGCGCTCGAGGAGCCGCTCCCGCTCCCGCTCC
CCGCCTTCCCGCCGCCGCTCGAGGTCCCCGCCCAGGCACCGTGACGGCAG
CGCCGAGGTCGGCGGCAGCAGCAGGAGGGGCCGGGACCGCCGCGATTCTA
GCGTTGACGGCGGAGGTGGCCGGGACAGAGAACGGGACAACGAGGTGGGT
CAGACGGTCAGATGATCATATCGTACTGCGGTTGGCTAGCTTTCATTGCG
TTGTTCTTGGTTTTAGGGAGTGGAGGGTCTTTCGCGTGTGCGTGTCTCTT
GTGTATTGTGTCAGGAAGCAGGCGGGTGGTGTGTTTTGCCGCACCTGATG
ATGCGAGATAGAAGCGGCCTGCTTACATGTGGGCGTGGCCTGCTTACATG
TGGGCGTGGTGTTGCCGTACGACAGCGGGGCTTGTGCAGCTGCGTGCATC
CCGAGTCTCGAACGAACAAGCAACACGTGTCAAGTCACGCTGCTTGCTCC
TCGTGGGTCATCGTGTTGAGAGCGAGCGGCTTGATGCCGCGTTTTCCCTG
GGGCGGGCTTGTGAAACGTTTGGCGCTTCAACGGATTTTTCCCGTCACGT
CAGTGTTTTTCAGCTTTTCTGGGCAAGCCCAGTTGTTGGCGCGCCTGCTC
CTCCTTGTCAGCTCCTCTACTGCTGCTGCGTGATAGATACGTACGGAGCG
ATGGGATCTGCATCCTGCCTCCACCGATTGAGCCCACCTCCCCCCCCCTA
CTGACTGACGTTTCGACGCCTTCCGCACCCCTGCTCTCTCTTGCCCGGTG
AAACCGCGGGATACGAAACTTTGTGTCCCATCCGTTTTTTTGCAGGGCCA
CCGGAAGGCCGACAAGCAGAACGGGTTCCGCGACAGCAGCCCGCCCATGA
ACGGCGACGACCGCGCCCGCCGCAACAGCGACGCTGGTAGCCCCAGTCCC
CGCTAACCGTGGTGGATCCGTGCGCATGTGTTACGGCTATGTAGGCGCCG
GCAAGGAATTCAGCAATGCAGGGTGGACCGGACGATATCAAAATGATTCC
TCTGCGTTATTGCTGTGTACGGCGTTTCAAGGGTGATTTTTTTCGGTCCT
CATGATGGATGTGCTTTTGATCGGAGGAGGAGGACTGGCGTCCCTTTTTA
TCATCAACGCCTGGGGTGTTGGATACGTGCATGTATGTGGTATTCGATGC
TTGCATTTGTGTCGATGCGTAGTCTACATGTCGTGCGTGCGTCGCATGAG
TGAAGGTTCTTCTGTGCTTGACTCTATTGCTCAAACCCACTTCTGCTTGT
AGTGGAGGGGAATGGACGAAACGTGAACTGCGATCGTCCATACCGGGAAG
ATTTTAATGGGTTTCTGTCGACTTTTTTTTTTGGATTTGGGTTGCAACCA
ACCATCAGGCGCTCTCTGGCTGTAGACAAGGAGGGCTGCTTCGTTATTGT
TTTGTCCGACGAGCTGCGCGGGGCAGAGCACGGGTTCAAGGAGAGTGGTC
TGTTGAAGGTCGTGGTTTCAGGGCGACGAAGGCTGAGTGTCTTGTGAACT
GATCAGAGCGGAGGGATCGTCGTTGCTGTCGGCAGAGCCGGTTGGGGCGG
TTTTTTTATTTTGTGTTCGTTTGTTTGCTTGTGTTAAGTCAAGTCTAAGC
AGGCCTGCTTCTGCGTTTCGGCGAATACTGATTTTGCCAGAAAAAAATGA
GACTCGTCGATCACACGTAGTTTTTCAAGTCGACGCGCACGTACATCCAA
GCGCTCCCAACAATAATCTCTGGTTGTTTTCGGAGGAGAGCATTGAATTA
ATATGTTCTTAATACTCTC
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Coding sequence (CDS) from alignment at C-linearis_contig11:2994381..3000699+

>mRNA_C-linearis_contig11.1348.1 ID=mRNA_C-linearis_contig11.1348.1|Name=mRNA_C-linearis_contig11.1348.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at C-linearis_contig11:2994381..3000699+ (Chordaria linearis ClinC8C monoicous)
ATGAGCCGCCGTGAAGGGACTTTCTTCGGCGACCCCGGCGCGAGGGGATG
AGCCGCCGTGAAGGGACTTTCTTCGGCGACCCCGGCGCGAGGGGGAATGG
CCCCCCCAACATCGAGGGCATGGTCACCCTCAAGGTGGACAACGTGCCCT
ACAACTCCAGCATCGATGACCTCCGGCGCGTCTTCGAGAAGAATGGCCCC
CCCAACATCGAGGGCATGGTCACCCTCAAGGTGGACAACGTGCCCTACAA
CTCCAGCATCGATGACCTCCGGCGCGTCTTCGAGAAGTTCGGAAACCTCG
GGGACATCTACTGCCCGCGGGACCTTCGCACGGGCGAGCCGAGGGGCTTC
GCGTTCGTGCGCTTCATAGACCAGCGCGACGCTGACGACGCCGTCGACCG
CATGGATGGCGAGTTCTTCGCCGGCCGGGAGCTTCGAATCCAGGTTCGGA
AACCTCGGGGACATCTACTGCCCGCGGGACCTTCGCACGGGCGAGCCGAG
GGGCTTCGCGTTCGTGCGCTTCATAGACCAGCGCGACGCTGACGACGCCG
TCGACCGCATGGATGGCGAGTTCTTCGCCGGCCGGGAGCTTCGAATCCAG
TACGCTAAGAAGAGGAGGCCCGAGGGGAGCTACGGAGGTGGAGGGCACGG
CGGCGGATACGGTGGTGGAGGGGGGCGGTACGGAGGTCGTGACGACAGGC
GCGATGACTACCGCCGTTCCAGCCGCTACAGCCGCAGCCGCAGCCGCTCC
AGTACGCTAAGAAGAGGAGGCCCGAGGGGAGCTACGGAGGTGGAGGGCAC
GGCGGCGGATACGGTGGTGGAGGGGGGCGGTACGGAGGTCGTGACGACAG
GCGCGATGACTACCGCCGTTCCAGCCGCTACAGCCGCAGCCGCAGCCGCT
CCAGGGACCACCGCCGCCGCCGCTCTAGGAGCGCTTCCCCTCGCCGCCGC
TCGCGGTCCCGCTCTCCGGGGCGCCGCCGCAGCCGGCGCTCGAGGAGCCG
CTCCCGCTCCCGCTCCCCGCCTTCCCGCCGCCGCTCGAGGTCCCCGCCCA
GGCACCGTGACGGCAGCGCCGAGGTCGGCGGCAGCAGCAGGAGGGGCCGG
GACCGCCGCGATTCTAGCGTTGACGGCGGAGGTGGCCGGGACAGAGAACG
GGACAACGAGGGACCACCGCCGCCGCCGCTCTAGGAGCGCTTCCCCTCGC
CGCCGCTCGCGGTCCCGCTCTCCGGGGCGCCGCCGCAGCCGGCGCTCGAG
GAGCCGCTCCCGCTCCCGCTCCCCGCCTTCCCGCCGCCGCTCGAGGTCCC
CGCCCAGGCACCGTGACGGCAGCGCCGAGGTCGGCGGCAGCAGCAGGAGG
GGCCGGGACCGCCGCGATTCTAGCGTTGACGGCGGAGGTGGCCGGGACAG
AGAACGGGACAACGAGGGCCACCGGAAGGCCGACAAGCAGAACGGGTTCC
GCGACAGCAGCCCGCCCATGAACGGCGACGACCGCGCCCGCCGCAACAGC
GACGCTGGTAGCCCCAGTCCCCGCTAAGGCCACCGGAAGGCCGACAAGCA
GAACGGGTTCCGCGACAGCAGCCCGCCCATGAACGGCGACGACCGCGCCC
GCCGCAACAGCGACGCTGGTAGCCCCAGTCCCCGCTAA
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