mRNA_C-linearis_contig11.1304.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: D8LFQ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFQ2_ECTSI) HSP 1 Score: 1270 bits (3286), Expect = 0.000e+0 Identity = 769/1347 (57.09%), Postives = 853/1347 (63.33%), Query Frame = 1
Query: 1 MLRRHFKRRNYFAAATAR-RAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHTPAPTA*PTSCDLRGRSKNATYPGSCRICWPGI*GAPPPR-------RGCCSQVQEGPVGSHEWLAAAEARRQD--QRRHGHYQXXXXXXXXXXRARPRRS*SHQIRAAEEWYRWGAGD----RETRQRRRLSLFRGEPGLVSRRVLGSGDAHPRRNAPACVGGAK--HARGMWGFCV----QLSVRRCFLQGTSRGPGGSKVPLRA---FFQWRTQ---NARHSQVRA-SPQKRSVSRSRFRWH-RGEAGPRRSTPRHEVY-----------SLSAGESVARRPTLGWH-------RKELRHHGSRACSLAFCRK-------GRQKEYVAGHMRGRVTSEP*ATATAIDFAGGQGRLCCHGRARRSREK--LLCVPCSESRVQDRSCTD---------AHEQPSYVIHRPA-----------PRVDREDCRSPAWV-LHRRRRAREKDRGLDSHPESGRCYNRGSRVHV---YPCPQHDPRGCSQQRRPRHGNVRHAPAAARS*EQWHVHQRG*RRQAARSRARVSHLLPPVRAQARQDDRRAGRNGR*SVVHL-----GCGRQQCRSTDESPG-EVWRDRTHKVWPTRFRFPPRLYQGLC-EVPCFPGFDEMQRGRGVGRAGTTGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDP 3783
MLR+H+K+RNY+AAATA R +YRWCYAEQVDQAAPLPDRSNGWRY GPR+GETYRRQ VFGAGFRLRLPFPRL GPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAAD+TWRVILCWGSR RRIDVNQHGIP SL DLQVRAGV SEDPRFRQL+IASFGHRLV+YDPLTEFG+ WKERLP ACLAVLVADSWRDCQ+GLL RDRRRFGFRDVDPLTGAFMDSR GGRSKKGVKRAPPNAL GGNYFRNLYSI+LERDVG EF+AWLSGEEC+PAVTVRHL+KWLKTTKASVVVWSHRGSGAEVVG KGQTT+LRPRALHVGVREGHVYRLVLDGPWKDRFT AREGAVGPSL VAVEHCV TRRLFRRIAEAAEEGEGEE SDGDTR FGRCADMT AIL SSQT+ DQQTARKRRRG DDKADSKKTWYAPPGTALDELMLHLHLGGVAC GRLTSYSHWDSLSLPAHGII+R+WCGASMGGLDPD LECDEATRLIELHGTLGR+LIRGVMDFRV SEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAML M NLPAFTHMDEVQ FDGH IEDWTLYVVRL+A GDPDVFLNADVTPVFGRNY+RYLAL+ TPAP + + A C I PR R + + P + + R Q+RH R + + ++E G E + + G G + L SGDA+ C ++ + G W + +R ++ GGS + FF+ + ARH S + ++ +F + A P R EV ++ A R W E H R+ RK + +R V+ E GG G+ C RA ++ K L+ P + R S TD A Q + I A PRVD A++ LH L + S VHV Y Q P VR + + S + RQ RA + R + R D + + S++++ Q R+ + G E TH + F Y C F G G G + VVGAQYRDLGKTGKVHKNHAY IVRSS DSVVV+SAFDDGATLEETTLSRAAAEILFDP
Sbjct: 1 MLRQHYKKRNYYAAATALPRPEYRWCYAEQVDQAAPLPDRSNGWRYLGPREGETYRRQAVFGAGFRLRLPFPRLCPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADETWRVILCWGSRGRRIDVNQHGIPTSLVDLQVRAGVISEDPRFRQLNIASFGHRLVRYDPLTEFGVIWKERLPGACLAVLVADSWRDCQVGLLARDRRRFGFRDVDPLTGAFMDSRAGGRSKKGVKRAPPNALDGGNYFRNLYSIMLERDVGSTEFSAWLSGEECVPAVTVRHLDKWLKTTKASVVVWSHRGSGAEVVGAKGQTTSLRPRALHVGVREGHVYRLVLDGPWKDRFTGAREGAVGPSLHVAVEHCVRTRRLFRRIAEAAEEGEGEEKSDGDTRAFGRCADMTEAILTSSQTDTDQQTARKRRRGTDDKADSKKTWYAPPGTALDELMLHLHLGGVACAGRLTSYSHWDSLSLPAHGIIIRTWCGASMGGLDPDSLECDEATRLIELHGTLGRKLIRGVMDFRVSSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLSMENLPAFTHMDEVQVFDGHDIEDWTLYVVRLEAVGDPDVFLNADVTPVFGRNYKRYLALIKTPAPHR------VSHFVRPARTIQKCHI----------PRLVQDLLARDLGEPLLQDPDAARRFKKGLFVRTSGLLQQRHAD-----------------RINAVMVTTSKEAMAVGGKIVPVLGEVNRIKSELRKNGTDGGLGIEKLDSGDAY------LCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARHLYEHCFSGELKAPGTLKFEPALKNAASPDRVFAGIEVKLALDILPPAMRTIPCPRERALRVVPLWGGIGETFGTMEAAHAAWRSVGKDDKRKIWPDICAAESPATLERLLRELVSQEDRVVCAVTGEHGGAGKSYCALRAAKAVFKTGLVLTPTNSLRT---SYTDLPSGWSVKTADHQLGFFIGDDARVRKTAGSIHIPRVDVVIIEEAAYMSLH----------ALSMIFAA----THSSGVHVIGTYDTHQLQP-------------VRESSGMSISVDNVD-------RQLVLERAFPTCFHLFARKRDRTIDEQVEMDD--SLLYILDAGDNSAEAQTRALERFGGIEPTGPGTHV---SDFHL---AYTRECARFHAFRGLTRCNEAGGWDALGQSAVVGAQYRDLGKTGKVHKNHAYHIVRSSADSVVVQSAFDDGATLEETTLSRAAAEILFDP 1263
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5KTC4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC4_9PHAE) HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0 Identity = 665/1282 (51.87%), Postives = 743/1282 (57.96%), Query Frame = 1
Query: 10 RHFKRRNYFAAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHTPAPTA*PTSCDLRGRSKNATYPGSCRICWPGI*GAPPPRR-GCCSQVQEGPVGSHEWLAAAEARRQDQRRHGHYQXXXXXXXXXXRARPRRS*SHQIRAAEEWYRWGA------GD-RETRQRRRLSLFRGEPGLVSRRVLGSGDAHPRRNAPACVGGAKHARGMWGFCV----QLSVRRCFLQGTSRGPGGSKVPLRA---FFQWRTQNARHSQVRASPQKRSVSRSRFRWHRGEAGPRRSTPRHEVYSLSAGESVARRPTLGWHRKELRHHGSRACSLAFCRKGRQKEYVAGHMRGRVTSEP*ATATAIDFAGGQGRLCCHGRARRSREKLLCVPCS-ESRVQDRSCTDAHEQPSYVIHRPAPRVDREDCRSPAWV-LHRRRRAREKDRGLDSHPESGRCYNRGSRVHVYPCPQHDPRGCSQQRRPRHGNV-RHAPAAARS*EQWHVHQRG*RRQAARSRARVSHLLPPVRAQARQDDRRAGRNGR*SVVHL-----GCGRQQCRSTDESPG-EVWRDRTHKVWPTRFRFPPRLYQGLCEVPCFPGFDEMQRGRGVGRAGTTGVVGAQYRDLGKTGKVHKNHAYRIVRSSDDSVVVESAFDDGATLEETTLSRAAAEILFDP 3783
RH+K+R+Y+AAATARR +YRWC EQVD+A P+ RSNGWRY GPR+GETYRRQ VFGAGFRL LPFPRLP GPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVH DADAWRAAFVDVEG GHGQLVVSAAD+TWRVILCWGSR RRIDVNQH IP SL DLQVRAGVTSEDPRFRQL+IA FGHRLV++DP+TEFG+TW ER P A LAVLVADSWRDCQI LL RD+RRF F D L+G VKRA PNAL GGNYF NLYS +LERDVG EF+AWL GEEC PAVTVRHLEKWLKTTKASVVVWSHRGSGAEV GPK Q T+LRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHC TRRLFRR+AEAAEEGEGEE SDGDTRTFGRCADMT AILA+ QTE DQQT RKRRRGVDDKADSK+TW LTSYSH DSLSLPAHGIIVR+W GASM GLDPD LECDEATRLIELHGTLGR+LI GVMDFRV SEYSPSLLALLEVCWRGPI GAEDA GTTYGPGDWQCDINGAHTAAM M NLPAFTHMD+ QAFDGH IEDWTL VVRL+AGGDPDVF RYLAL+ TPA + P + G P + + ++G + L QRRH H R + + ++E G G+ + R + GE G+ L SGDA+ A + G W + +R ++ GGS + FF R P+ + +R R+ L +GE +RP L S AF A H R + D C ++ S E+LL S E RV D PRVD ++ LH L + SG VHV G H R + RQ RA + R + R D + + S++++ + Q R+ + G E R H+ T G+ R G +GVVGAQYRDLGKTGKVHKNHAY IVRSS DSVVV+SAFDDGATLEE TLSRAAA ILFDP
Sbjct: 3 RHYKKRHYYAAATARRPEYRWCGVEQVDEAVPMSTRSNGWRYLGPREGETYRRQAVFGAGFRLHLPFPRLPPGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHPRDADAWRAAFVDVEGSGHGQLVVSAADETWRVILCWGSRGRRIDVNQHSIPTSLVDLQVRAGVTSEDPRFRQLNIACFGHRLVRHDPVTEFGVTWTERSPGAYLAVLVADSWRDCQIDLLERDQRRFAF---DLLSG--------------VKRAAPNALDGGNYFCNLYSKILERDVGLTEFSAWLLGEECTPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVRGPKDQPTSLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCARTRRLFRRVAEAAEEGEGEEKSDGDTRTFGRCADMTQAILATGQTETDQQTTRKRRRGVDDKADSKETW-------------------------LTSYSHRDSLSLPAHGIIVRTWRGASMDGLDPDSLECDEATRLIELHGTLGRKLIGGVMDFRVSSEYSPSLLALLEVCWRGPIAGAEDALGTTYGPGDWQCDINGAHTAAMPSMENLPAFTHMDDGQAFDGHDIEDWTLCVVRLEAGGDPDVF--------------RYLALIQTPALNRVTHFVRPARTDRKCHIPELVQDVLARDLGEPLLQDLDAARRFKKGLLVRTSGLL--------QRRHAH-----------------RINAVMVTTSDEAMAVGGKIVPVLGEVNRIKSELRKNGTDGELGIEK---LDSGDAYLSFEASRVW----YRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFF------------RGPPEVQEEARHRYE------------------HLFSGEP--KRPAL-----------SSGIGEAF------STMEAAHAAWRFVGKDDKRKMWPDI--------CAAKSPASLEQLLRELMSQEDRVLGFFIGDDARVRKTAGSIHIPRVDVVIIEEAVYMSLHALSMI------LAAAHSSG--------VHVI------------------GTYDTHQLQLVRESSGMSISVDNVDRQLVLERAFPTCFHLFARKRDRTIDEQVEMDD--SLLYILDAGDNSSKAQSRALERFSGVETTRHGPHRSISTSHI------------------------HGIVR-GQSGVVGAQYRDLGKTGKVHKNHAYHIVRSSADSVVVQSAFDDGATLEENTLSRAAAAILFDP 1080
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5KSM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSM3_9PHAE) HSP 1 Score: 888 bits (2295), Expect = 2.460e-296 Identity = 432/646 (66.87%), Postives = 510/646 (78.95%), Query Frame = 1
Query: 64 YRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSD-GDTRTFGRCADMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHTPA 1989
YRWC EQVDQA PLP+R+NGWRY+GPR G YRRQ VFG G+R+R+ GPG+RWFNSHP GGDP L +FQ+WA RR LVH DADAW+ AF+DVEGGG GQLVVSAADDTWR ILCWGS RRI+++ GIP SL++LQVRAG+ S PRFRQL+IASFGHR+V+Y+PLT F +TWK+RLP ACLAVLVAD+WRDCQ+ LL+R+RRRFGFRDVDP+TG+FM+S GGR ++G NAL GGNYFRNL+S+LL+RDVG EF WLSG PA+T+R LEKWL T+A+VVVWSHRGSG V+GP + T LRPRALHVGVREGHVYRL LDGPW+DRF G SLDVA+EH V T+R FRRIAEA EE + +T+D G +TF AD+ + ++A +Q+E + QQ ARK+R+ +++ TWYAPPGT LDELMLHLHL GV+C GRLTSYSHWDSLSLPAHGI +R+WC ASMGGLDPD LE D+ATRLIELH LG + GV+DFRV S+YS SLLALLEVCWRGPIVGAE+ SGT+YGP DWQCDINGAHTAA++ M +P F H+DEV+ +D HGIEDWTLY++ LDA G PDVF NADVTPVFGRNY+RYL LV T A
Sbjct: 21 YRWCCVEQVDQAEPLPNRNNGWRYKGPR-GVMYRRQAVFGTGYRVRIS--ATSRGPGYRWFNSHPAGGDPSLENFQSWATRTWRRGLVHPRDADAWKTAFIDVEGGGRGQLVVSAADDTWRAILCWGSAGRRIEIDHEGIPASLSNLQVRAGIESSSPRFRQLNIASFGHRVVRYEPLTTFCMTWKKRLPGACLAVLVADAWRDCQLDLLIRERRRFGFRDVDPITGSFMNSTGGGRRREGATTPLRNALDGGNYFRNLFSVLLDRDVGSEEFDTWLSGVSEPPALTLRDLEKWLNKTRANVVVWSHRGSGDHVLGPIDKKTDLRPRALHVGVREGHVYRLELDGPWRDRF--------GSSLDVAIEHSVKTQRRFRRIAEAVEEKDKPDTTDCGSKKTFLCVADIVSDLMAINQSEEENGHQQAARKKRKRGKRRSEF-NTWYAPPGTVLDELMLHLHLVGVSCRGRLTSYSHWDSLSLPAHGITIRTWCSASMGGLDPDELEPDQATRLIELHNELGLKFYHGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEEVSGTSYGPEDWQCDINGAHTAALMSMEVVPVFGHVDEVEEYDDHGIEDWTLYIIELDAFGKPDVFFNADVTPVFGRNYKRYLDLVDTAA 654
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5JCS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS9_9PHAE) HSP 1 Score: 873 bits (2256), Expect = 5.370e-286 Identity = 431/650 (66.31%), Postives = 501/650 (77.08%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEAD---QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALV 1977
A +++R A YRWCY EQVDQA PL +RSNGWRYRGPR G TYRRQ VFG G+R+R+ FP +GPGH WFNSHP+GGDP+L FQ WAR +L R +VH DA+AWR AFVDVEGGG GQLVVS+AD+TWRVILCW S RRIDV+ GIP SL LQVR+GV S+ P FRQL+IA+FGHR+V+Y P+T FG W+E+LP ACLAVLVAD+WRD Q+ LL R+R+RFGFRDVDP TGAF S GGR KKG NAL GGNYFRNLYSILLERD+G EF W+SG+ PA+T+RHLEKWL TKA VVVWSHRG+GA ++GP T+LRP LHVGVREGHVYRLVL+G W+DRF G SLDVAVEH V T R FRRI+E EE E + + T+TF AD+ + I+A QT Q +KR+ G K KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPA GII+R+WC ASMG LDPD E D+ATRLIELH LG + RGV+DFRV S+YS SLLALL VCWRGPIVGAEDASG+ YG DWQCDINGAHTAA+++M +P F HMDEV+ FDGH IEDWTLY+++LDA G+PDVFLNADVTPVFGRNY+RYL L+
Sbjct: 8 AVSSSRAASYRWCYVEQVDQAEPLANRSNGWRYRGPR-GVTYRRQAVFGTGYRIRISFPSS-AGPGHTWFNSHPVGGDPNLYSFQTWARMVLERGMVHPRDAEAWRTAFVDVEGGGQGQLVVSSADETWRVILCWASAGRRIDVDSQGIPFSLLSLQVRSGVDSQSPLFRQLNIATFGHRVVRYTPMTAFGKKWQEQLPGACLAVLVADTWRDSQVDLLARERKRFGFRDVDP-TGAFTSSCGGGRPKKGAPAQNKNALDGGNYFRNLYSILLERDIGETEFDKWVSGDTEPPALTLRHLEKWLSMTKAGVVVWSHRGTGANILGPSEGKTSLRPPTLHVGVREGHVYRLVLEGRWRDRF--------GSSLDVAVEHRVRTYRKFRRISEMTEEEEEPDVTGIGTKTFSCVADIVSDIMAIKQTGGGHNRQAVEKKRKHGR--KVSECKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAQGIIIRTWCSASMGRLDPDDFEPDQATRLIELHSALGLKFYRGVLDFRVSSQYSQSLLALLGVCWRGPIVGAEDASGSCYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDALGEPDVFLNADVTPVFGRNYKRYLDLI 644
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5KMS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS8_9PHAE) HSP 1 Score: 812 bits (2098), Expect = 2.990e-275 Identity = 407/651 (62.52%), Postives = 485/651 (74.50%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLL--VRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEAD--QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALV 1977
A ++ YRWCY EQVDQ AP+ RSNGWR +R+ FP P GPG+RWFNSHPLGGDP+L +FQ WART+L+ +VH DA+AWR AFV+VEGGG GQLVVSAAD++WRVILCW S RRI+V+ GIP SL LQVR+G+ S+ P FRQL+IA+FGHR+V+Y P+T FG W+++LP ACLAVLVAD WRD Q+ LL ++RRRFGFRDVDP TGAFM S GGR KKG NAL GGNYFRNLYSILLERD+G EF W+SG+ PA+T+ HLEKWL T ASVVVWSHRG+GA ++GP T L+P LHVGVREGHVYRLVL+GPW DRF G SLDVA++H V T R FRRI+E E + +T+ T+TF AD+ + I+A +QT D +Q KR+ G K KTWYAPPGTALDELMLHLHL GV+C G+LT+YS WDSLSLPAHG+++R+WC ASMGGLDPD E D+ATRLIELH LG + RGV+DFRV S+YS SLLALLEVCWRGPIVGAEDASG++YG DWQCDINGAHTAA+++M +P F HMDEV+ FDGH IEDWTLY ++LDA G+PDVFL+ADV PVFGRNY+RYL L+
Sbjct: 8 AVSSPHATSYRWCYVEQVDQVAPVVGRSNGWR---------------------VRISFPSSP-GPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVILCWASAGRRIEVDT-GIPISLVSLQVRSGIDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVADVWRDSQVYLLKKTKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQPPTLHVGVREGHVYRLVLEGPWGDRF--------GSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFGTKTFSCVADIVSDIMAINQTGGDHNRQPVEKRKHGR--KVAESKTWYAPPGTALDELMLHLHLAGVSCKGKLTNYSRWDSLSLPAHGVVIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYTIKLDALGEPDVFLDADVMPVFGRNYKRYLDLI 624
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5L8I4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8I4_9PHAE) HSP 1 Score: 780 bits (2014), Expect = 2.360e-258 Identity = 407/615 (66.18%), Postives = 436/615 (70.89%), Query Frame = 1
Query: 85 QVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNAD 1929
+VDQAAPL RSNGWRYRG R+GETYRRQ VFGAG+RLRLP R+ PGHRWFNSHP GGDPDL DFQA A TML R LVH DADAWR A VDVEGGG GQLVVSA D+TWR HGIP SL LQVRAGV SED RF+QL+IASFGHRLV++DPLT+FGITWKER P ACLAVLVADSWRDCQ+ LL RDRR FGFRDVDPLTG NY RNLYSI+LERDVGP E +AWLSGE+ IPAV VRHLE+W KTTKA VVVWS +GA+V+G K Q T+LRPRALHVGVREG VYRLVLDGPWKDRF+ ARE AV PSLDV+VEHCV TRRLF RIAE T RCADMT AILAS+Q+ DQQT RKRRRGVDD ADSKKTWYAPPGTALDELMLHLHLGGV CTGRLTSYSHWDS+SLPAHGII R WCGASMGGLD DASGTTYGPGDWQCDINGAHTAA+ +MGNLPAFTHMDEVQAFDG +E+WTLYV RLDAGGDPDV LN+D
Sbjct: 7 EVDQAAPLACRSNGWRYRGEREGETYRRQAVFGAGYRLRLPLHRVYPVPGHRWFNSHPFGGDPDLRDFQALAGTMLCRGLVHPRDADAWRVAIVDVEGGGLGQLVVSAVDETWR----------------HGIPTSLVGLQVRAGVASEDQRFKQLNIASFGHRLVRHDPLTDFGITWKERDPGACLAVLVADSWRDCQVDLLARDRRIFGFRDVDPLTG--------------------------NYSRNLYSIMLERDVGPGELSAWLSGEKRIPAVAVRHLEEWRKTTKAPVVVWSRASNGADVLGSKDQLTSLRPRALHVGVREGPVYRLVLDGPWKDRFSGAREWAVDPSLDVSVEHCVRTRRLFHRIAE----------------TLVRCADMTEAILASNQSAEDQQTTRKRRRGVDDMADSKKTWYAPPGTALDELMLHLHLGGVTCTGRLTSYSHWDSMSLPAHGIITRIWCGASMGGLD--------------------------------------------------------DASGTTYGPGDWQCDINGAHTAAIRNMGNLPAFTHMDEVQAFDGRDMENWTLYVARLDAGGDPDVCLNSD 507
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: D7FQN9_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7FQN9_ECTSI) HSP 1 Score: 766 bits (1978), Expect = 1.740e-251 Identity = 387/624 (62.02%), Postives = 461/624 (73.88%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLLVR--DRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEAD--QQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDA 1896
A ++ YRWCY EQVDQAAPL RSNGWRY GP G TYRRQ VFG GFR+R+ FP P GPG+RWFNSHPLGGDP+L +FQ WART+L+ +VH DA+AWR AFV+VEGGG GQLVVSAAD++WRVI CW S R I+V+ GIP SL +LQVR+G+ S+ P FRQL+IA+FGHR+V+Y P+T FG W+++LP ACLAVLVA+ WRD Q+ LL + +RRRFGFRDVDP TGAFM S GGR KKG NAL GGNYFRNLYSILLERD+G EF W+SG+ PA+T+ HLEKWL T ASVVVWSHRG+GA ++GP T L+ LHVGVREGHVYRLVL+GPW DRF G SLDVA++H V T R FRRI+E E + +T+ T+TF AD+ + I+A ++T D +Q KR+ G K KTWYAPPGTALDELMLHLHL GV+C AHG+I+R+WC ASMGGLDPD E D+ATRLIELH LG + RGV+DFRV +YS SLLALLEVCWRGPIVGAEDASG++YG DWQCDINGAHTAA+++M +P F HMDEV+ FDGH IEDWTLY+++LDA
Sbjct: 8 AVSSPHATSYRWCYVEQVDQAAPLAGRSNGWRYLGP-GGITYRRQAVFGTGFRVRISFPSSP-GPGYRWFNSHPLGGDPNLYNFQTWARTVLQGGMVHPRDAEAWRTAFVEVEGGGLGQLVVSAADESWRVIFCWASAGREIEVDTQGIPISLVNLQVRSGLDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQKQLPGACLAVLVAEVWRDSQVYLLKKPKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVHNKNALDGGNYFRNLYSILLERDIGEVEFDTWVSGDAEPPALTLLHLEKWLHMTNASVVVWSHRGTGANILGPSDGKTNLQLPTLHVGVREGHVYRLVLEGPWGDRF--------GSSLDVAIDHSVRTYRKFRRISEMTVEEQEPDTTGFVTKTFSCVADIVSDIMAINETGGDHNRQPVEKRKHGR--KVSESKTWYAPPGTALDELMLHLHLAGVSCE---------------AHGVIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSRQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIIKLDA 603
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5LNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNU8_9PHAE) HSP 1 Score: 745 bits (1923), Expect = 7.000e-245 Identity = 397/689 (57.62%), Postives = 458/689 (66.47%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEFGITWKERLPSACLAVLVADSWRDCQIGLL-VRDRRRFGFRDVDPLTGAFMDSRVGGRSKKGVKRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACT-GRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDIN----------------------------------------GAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALV 1977
A +++ + YRWCY EQVDQA PL RSNGWRY GP G TYRRQ VFG GFR+R+ FP P GPGHR R +VH DA+AWR AFVDVEGGG GQLVVSAADDTWRVILCW S RRIDV+ GIP SL +LQVR+GV S+ P FRQL+IA+FGHR+V+Y P+T FG W+E+LP ACLAVLVAD+WRD Q+ LL R+RRRFGFRDVDP TGAFM S GGR KKG NAL GGNYFRNLYSILLERD+G +F W+SG+ PA T TKASVVVWSHRG+GA ++GP T LRP +HVGVREGHVYRLVL+GPW+DRF G SLDVA+EH V T R FRRI+E EE E + + +TF AD+ + KTWYAPPGTALDELMLHLHLGGV+C G+LT+YS WDSLSLPAHG+I+R+WC ASMGGLDPD E D+ATRLIELH LG + RGV+DFRV S+YS SLLALLEVCWRGPIVGAEDASG++YG DWQCDI AA+++M +P F HMDEV+ FDGH IEDWTLY+V+LDA G+PDVF NADVTPVFGRNY+RYL L+
Sbjct: 9 AVSSSHASSYRWCYVEQVDQAEPLAGRSNGWRYMGP-GGVTYRRQAVFGTGFRIRISFPSSP-GPGHRQV-----------------------RGMVHPRDAEAWRTAFVDVEGGGLGQLVVSAADDTWRVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPFFRQLNIATFGHRVVRYAPITAFGKKWQEQLPGACLAVLVADAWRDSQVDLLKARERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVQNKNALDGGNYFRNLYSILLERDIGEVKFDKWVSGDAEPPASTPSRKVALDYMTKASVVVWSHRGTGANILGPPDGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRF--------GSSLDVAIEHRVRTYRKFRRISEMTEEKEEPDPTGFGAKTFSCVADIVSEC---------------------------KTWYAPPGTALDELMLHLHLGGVSCKKGKLTNYSRWDSLSLPAHGLIIRTWCSASMGGLDPDDFEPDQATRLIELHNALGLKFHRGVLDFRVSSQYSQSLLALLEVCWRGPIVGAEDASGSSYGREDWQCDIXTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALMNMETVPVFGHMDEVEEFDGHNIEDWTLYIVKLDALGEPDVFHNADVTPVFGRNYKRYLDLI 636
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5KE79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE79_9PHAE) HSP 1 Score: 723 bits (1867), Expect = 2.960e-242 Identity = 387/712 (54.35%), Postives = 452/712 (63.48%), Query Frame = 1
Query: 37 AAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQGETYRRQEVFGAGFRLRLPFPRLPSGPGHRWFNSHPLGGDPDLPDFQAWARTMLRRRLVHRDDADAWRAAFVDVEGGGHGQLVVSAADDTWRVILCWGSRSRRIDVNQHGIPGSLADLQVRAGVTSEDPRFRQLSIASFGHRLVKYDPLTEF----------GITWKERLPSACLAVLVADSWRDCQIGLLVR--DRRRFGFRDVDPLTGAFMDSRVGGRSKKGV---------------------------------------------------KRAPPNALVGGNYFRNLYSILLERDVGPAEFAAWLSGEECIPAVTVRHLEKWLKTTKASVVVWSHRGSGAEVVGPKGQTTTLRPRALHVGVREGHVYRLVLDGPWKDRFTSAREGAVGPSLDVAVEHCVCTRRLFRRIAEAAEEGEGEETSDGDTRTFGRCADMTTAILASSQTEADQQTARKRRRGVDDKADSKKTWYAPPGTALDELMLHLHLGGVACTGRLTSYSHWDSLSLPAHGIIVRSWCGASMGGLDPDVLECDEATRLIELHGTLGRELIRGVMDFRVLSEYSPSLLALLEVCWRGPIVGAEDASGTTYGPGDWQCDINGAHTAAMLDMGNLPAFTHMDEVQAFDGHGIEDWTLYVVRLDAGGDPDVFLNADVTPVFGRNYRRYLALVHT 1983
A ++ YRWCY EQVDQAAPL RSNGWR +R+ P P PG WFNSHPL GDP+L +F WA T+L+R +VH DA+AWR AFVDVEGGG QLVVSAADDTW VILCW S RRIDV+ GIP SL +LQVR+GV S+ P FRQL+IA+FGHR+V+Y P+T F G W+++LP ACLAVLVAD WRD Q+ LL + +RRRFGFRDVDP TGAFM S GGR KKG + P NAL GGNYFRNLYSILLERD G EF W+SG+ PA+T+ HLEKWL TKASVVVWSHRG+GA ++GP T LRP +HVGVREGHVYRLVL+GPW+DRF G SLDVA+EH T R FRRI + EE E +T+ T+TF AD+ TAL ELMLHLHL GV+C G+LT+YS+WDSLSLPAHG+I+R+WC ASMGGLD D E D+ATRLIELH LG + RGV+DFRV S+YS SL ALLEVCWRGPIVGAEDASG++YG DWQCDINGAHTAA++DM +P F HMD+V+ FDG IEDWTL ++ LDA + DV LNADVTPVFGR Y+RYL L+ T
Sbjct: 8 AVSSTHATSYRWCYVEQVDQAAPLAGRSNGWR---------------------VRISLPSSPR-PGDMWFNSHPLRGDPNLYNFHTWAGTVLQRGMVHPRDAEAWRTAFVDVEGGGLRQLVVSAADDTWLVILCWASAGRRIDVDTQGIPISLVNLQVRSGVDSQSPLFRQLNIATFGHRVVRYAPITAFVXXXXXXXXXGKKWQKQLPGACLAVLVADVWRDSQVYLLKKPKERRRFGFRDVDP-TGAFMISSRGGRPKKGAPVKNKNDRSTLLTVGTTSATSIRFYWSATXARERRRFGFRDVDPAGRACEKQERPFNALDGGNYFRNLYSILLERDTGEVEFDKWVSGDTEPPALTLLHLEKWLHMTKASVVVWSHRGTGANILGPSNGKTNLRPPTVHVGVREGHVYRLVLEGPWRDRF--------GSSLDVAIEHSARTYRKFRRIPDMTEEEEEPDTTGFGTKTFSCVADIVR-------------------------------------TALGELMLHLHLAGVSCKGKLTNYSYWDSLSLPAHGVIIRTWCSASMGGLDSDDFEPDQATRLIELHNALGLKFYRGVLDFRVSSQYSQSLPALLEVCWRGPIVGAEDASGSSYGREDWQCDINGAHTAALMDMETVPVFGHMDKVEEFDGQDIEDWTLVIIYLDALEESDVILNADVTPVFGRKYKRYLDLIDT 651
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Match: A0A6H5KBM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM1_9PHAE) HSP 1 Score: 735 bits (1898), Expect = 1.240e-241 Identity = 383/508 (75.39%), Postives = 406/508 (79.92%), Query Frame = 2
Query: 2084 EPLLQDVDAARRFKKGLLVRTSGLLQQRHADRINAVMVTTSEEAMAVGGKVVPVLGEVNRIKSELRKNGTDGELGIEKLDSGDAYLCFEASRVWYRDGFWALGTLILDETRLRVLEVRNMLEACGGSAFSYQCDAVFFRGPPEVQEEARCRYEHFFSGELKTPGTLKFEPALKNAASPDRVFGGIEVKLVLDDLPPAMRSIPCPRERALRVVPLWGGIGKSFDTMGAAHAAWRSVERDDKRNMWLDICAAESPANLEQLLRQLISQEGRVVCAVTGEHGGAGKSFCAFRAAKAVFKTGLVLTPTNSLRTSYTDLPPGWIVRTADHQLGFYIGDDAHVRKTAGSIHIPRVDVVIIEEAAYMSIHALSMILAAAHSNGVHVMGTYDTHQLQPVRESSGMSISVDNVDRQLVLEREFPTCFHLFARKRDRTIDEQVEMDDSLLCILDAGDNSAVAQTRALERFGGIEPTRYGPRVSDFHLAYTRDCARFHAFRGLTRCNEAGGWDALGQRG 3607
E LL+DVDAARRF+KGL VRTSGLLQQRHADRINAVMVTTSEEAMAVGGK+VP+LGEVNRIKSELRKNGTDGELGIEKLDSGDAYL FEASRV RNMLEACGGSAFSYQCDAVF RG PEVQ EAR RYEHFFSGELKTPGTLKFEPALKNAAS DRVF GIE ++ TMGAAH AWRSV +DDKR MW DIC+AESPA+LEQLLR+L+SQE RVVCAVTG+HGGAGKS+C AAKAVF+T LVLTPTNSLRTS+TDLPPGW V+TADHQLGFYIGDD VRKT GSIHIPRVDVV IEEAAYMS+HALSMILAAAHS GVHV+GTY+THQLQP RE SG+SISVDNVDRQ+VLER FP CFHLFARKR RTIDEQVE+DDSLL ILDA +NSA AQ RALERFG I P P VSDFHLAYTRDC RFHA RGLTRCNEAGGWDALGQ G
Sbjct: 410 ESLLRDVDAARRFEKGLFVRTSGLLQQRHADRINAVMVTTSEEAMAVGGKIVPILGEVNRIKSELRKNGTDGELGIEKLDSGDAYLSFEASRV------------------------RNMLEACGGSAFSYQCDAVFLRGLPEVQAEARHRYEHFFSGELKTPGTLKFEPALKNAASSDRVFAGIE---------------------------------ENLGTMGAAHVAWRSVGKDDKRKMWPDICSAESPASLEQLLRELMSQEDRVVCAVTGKHGGAGKSYCTLHAAKAVFETDLVLTPTNSLRTSHTDLPPGWSVKTADHQLGFYIGDDTRVRKTVGSIHIPRVDVVKIEEAAYMSLHALSMILAAAHSKGVHVIGTYETHQLQPAREGSGLSISVDNVDRQVVLERSFPICFHLFARKRVRTIDEQVEVDDSLLYILDAANNSAKAQIRALERFGEIGPAGCDPHVSDFHLAYTRDCPRFHAVRGLTRCNEAGGWDALGQSG 860 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1304.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1304.1 >prot_C-linearis_contig11.1304.1 ID=prot_C-linearis_contig11.1304.1|Name=mRNA_C-linearis_contig11.1304.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=667bp MLRRHFKRRNYFAAATARRAQYRWCYAEQVDQAAPLPDRSNGWRYRGPRQback to top mRNA from alignment at C-linearis_contig11:2506352..2510631- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1304.1 ID=mRNA_C-linearis_contig11.1304.1|Name=mRNA_C-linearis_contig11.1304.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4280bp|location=Sequence derived from alignment at C-linearis_contig11:2506352..2510631- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2506352..2510631- >mRNA_C-linearis_contig11.1304.1 ID=mRNA_C-linearis_contig11.1304.1|Name=mRNA_C-linearis_contig11.1304.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4002bp|location=Sequence derived from alignment at C-linearis_contig11:2506352..2510631- (Chordaria linearis ClinC8C monoicous)back to top |