mRNA_C-linearis_contig11.1299.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: A0A6H5L973_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L973_9PHAE) HSP 1 Score: 692 bits (1787), Expect = 1.150e-244 Identity = 351/394 (89.09%), Postives = 368/394 (93.40%), Query Frame = 1
Query: 391 AFAIAALLGCAAVTPSTAFTGGVGFARTAGSGRQSARSRRAATTTSGVRMMAIDPAAVHSVGDYVNAVSTAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWLTTFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVAEALEDAKVNAWPDRRSRRYA 1572
A A AALLGCAA+ P+ AFTGG G AR AG R RRAA++T+GVRMMAIDPA VHS+G++VNAV +AGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPF+LWIEFIRSSVLGINDFYKG+GIEQSFGLAIV+FTL VKTLLVPLQ IQLQS+E+MQ L PTVKEINAKFGQNKEAATAATNRLY ET VNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTF+ GRGI WLTTFVDG P LGWHDTLCYMSIPAILV+SQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTA+SFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVAEALEDAKVNAWPDRRSRRYA
Sbjct: 4 ATAKAALLGCAAIAPTAAFTGGAGLARAAGG-----RDRRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPFSLWIEFIRSSVLGINDFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMQVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFENGRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTATSFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVAEALEDAKVNAWPDRRSRRYA 392
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: D7FS38_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS38_ECTSI) HSP 1 Score: 511 bits (1317), Expect = 2.730e-174 Identity = 259/302 (85.76%), Postives = 278/302 (92.05%), Query Frame = 1
Query: 397 AIAALLGCAAVTPSTAFTGGVGFARTAGSGRQSARSRRAATTTSGVRMMAIDPAAVHSVGDYVNAVSTAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWLTTFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLK 1302
A AALLGCAA+ P+ AFTGGVG ARTAG R RRAA++T+GVRMMAIDPA VHS+G++VNAV +AGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPF +WIEFIRSSVLGIN+FYKG+GIEQSFGLAIV+FTL VKTLLVPLQ IQLQS+E+M+ L PTVKEINAKFGQNKEAATAATNRLY ET VNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVA+EGFLWLPSLQGPTF+ GRGI WLTTFVDG P LGWHDTLCYMSIPAILV+SQKLSMTLLTPPDDGPDDATGSSLK
Sbjct: 6 ATAALLGCAAIAPTAAFTGGVGLARTAGG-----RDRRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPFNMWIEFIRSSVLGINEFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGPTFENGRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPPDDGPDDATGSSLK 302
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: A0A836CB90_9STRA (60Kd inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB90_9STRA) HSP 1 Score: 306 bits (784), Expect = 1.850e-94 Identity = 156/345 (45.22%), Postives = 229/345 (66.38%), Query Frame = 1
Query: 541 MAIDPAAVHSVGDYVNAVSTAGLDHTWLSHVMHGLSDAAAVPLEAVEE--EAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWLT-TFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVAEALEDAKVNAWPDRRSRR 1566
M +DP +H S +D +WLSHV G++DA A + V+ +AK + FA ++ + + GI+ Y+ +GI+ +FGL+IV+FT++VKT+L+PL +QLQS E+MQ + P K+I + +K +RLY++T VNPL GCLP+ Q PVFIGLYR++ + V NE FLW+P+LQGP FD+GRG+ WLT +V PSLGW DT+ Y SIP +LV+SQ +SM +L+PP D P D + + V+ YLP++IGWFSL VP+ALG+YW+ NN+ +T ++ +IKA+ K NPP+++IP DIL P LP++ +A+ +A++NA P R RR
Sbjct: 1 MMLDPVHLHHT-----VSSVLDVDQSWLSHVASGIADATAAVQDGVDGVVQAKKDDWFAQFVNQFEAIIKGIDAGYEKIGIQNAFGLSIVTFTVLVKTVLLPLNFLQLQSAEKMQQITPVQKKIAEMYPDDKATQQIIVSRLYEQTKVNPLAGCLPSFAQIPVFIGLYRSLQQLAAENVVNEPFLWIPNLQGPVFDKGRGVQWLTENWVGLTPSLGWADTIAYCSIPILLVLSQSISMKMLSPPVD-PKDESAMRTQQVLKYLPLMIGWFSLQVPAALGVYWMTNNIVSTTATQSIKAYLKANPPQLDIPEDIL-KPAQKSGLPSLEQAILEARINARPSRLPRR 338
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: A0A4D9CYJ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYJ8_9STRA) HSP 1 Score: 266 bits (679), Expect = 2.180e-78 Identity = 142/333 (42.64%), Postives = 203/333 (60.96%), Query Frame = 1
Query: 607 LDHTWLSHVMHGLSDAAAVPLEAV--------EEEAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWL-TTFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVA----EALEDAKVNAWPDRRSRR 1566
LD WLSHV G++DAA L+A + AK P F ++ + ++ G++ +G+ ++GLAI+ FT VK L+P+ Q++S +RMQALAP KE+ K+G+NK T +LY++ VNPL GCLPAL Q P+FI LYR++I ++ NE FLWLPSL GP + Q RG WL +VDG P+LGWHDT+ +++IP IL+++Q +S LLTPP D P A + V+ YLP+++G+FSL+VPS LG+YW+ NNL +TA S +IK F P +++ D D Y TVA E + +A NA P + +R
Sbjct: 20 LDPAWLSHVFQGVADAAMTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTA---QTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPED---LGYDPSTVAMGFEEMMAEATRNALPSEQPKR 346
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: W7TN75_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN75_9STRA) HSP 1 Score: 266 bits (680), Expect = 2.820e-77 Identity = 142/333 (42.64%), Postives = 203/333 (60.96%), Query Frame = 1
Query: 607 LDHTWLSHVMHGLSDAAAVPLEAV--------EEEAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWL-TTFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVA----EALEDAKVNAWPDRRSRR 1566
LD WLSHV G++DAA L+A + AK P F ++ + ++ G++ +G+ ++GLAI+ FT VK L+P+ Q++S +RMQALAP KE+ K+G+NK T +LY++ VNPL GCLPAL Q P+FI LYR++I ++ NE FLWLPSL GP + Q RG WL +VDG P+LGWHDT+ +++IP IL+++Q +S LLTPP D P A + V+ YLP+++G+FSL+VPS LG+YW+ NNL +TA S +IK F P +++ D D Y TVA E + +A NA P + +R
Sbjct: 122 LDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPPSDDPKTA---QTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPED---LGYDPSTVAMGFEEMMAEATRNALPSEQPKR 448
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: F0Y1Y4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1Y4_AURAN) HSP 1 Score: 259 bits (663), Expect = 2.510e-76 Identity = 127/267 (47.57%), Postives = 187/267 (70.04%), Query Frame = 1
Query: 769 MGIEQ-SFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWLT-TFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIPSDIL--DSPTADYALP-TVAEALEDAKVNAWPDR 1554
+GI+Q S+G++I+ FT ++T++ PL I +STER +AL P + +I ++G++++A AT +LY+ T NPL GCLPA+ Q PVFI LYR+++ D EGF ++P+L+GPT+D GRGI WLT +VDG PSLGWHDTL ++++P LV++Q +SM +LTPP D P+D + + V+ YLP++IGWFS NVPS LG+YW+ +N+ + A S KA+ K NPP++++ L D +A LP T+ EAL +A+VNA PDR
Sbjct: 61 LGIKQNSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPPD-PNDKSAQNANRVLKYLPLMIGWFSANVPSGLGLYWMTSNVFSVAGSLGAKAYLKANPPKLDVELRELGLDDESAGVKLPATLEEALVEARVNARPDR 326
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.490e-75 Identity = 134/293 (45.73%), Postives = 185/293 (63.14%), Query Frame = 1
Query: 553 PAAVHSVGDYVNAVSTAGLDHTWLSHVMHGLSDAAAVPLEAVEEEA-KGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQG--RGIAWLTTFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIK 1422
PAA VG + A++ G+D T L V GL+DA A +A + A FA + +++ ++D KG G+EQS+G AI+ FTL +K + PL QL ST +MQ L P VK+I + N EAA A LYKE VNPL GCLP+L Q P+FI LYRA++ + +EGFLWLPSL+GP F + W+ T+ +G P+LGWHDTLCY+SIP ILV++Q +S L++PP + A + + ++ YLP+LIGWFSLNVPS LG+YW+ NN+ +TA+S I+
Sbjct: 47 PAATSGVGG-LRALADGGIDFTVLHQVFSGLADATAATADAAADAAANNGGVFAGLVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKK--EGAEADTSQAILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIR 336
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI) HSP 1 Score: 256 bits (654), Expect = 5.590e-74 Identity = 140/358 (39.11%), Postives = 208/358 (58.10%), Query Frame = 1
Query: 505 RRAATTTSGVRMMAIDPAAVHSVGDYVNAVSTAGLDHTWLSHVMHGLSD---AAAVPLEAVEEEAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQG--RGIAWLTTFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDG--PDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFF-------KMNPPEMNIPSDILDSPTADYALPTVAEALEDAKV 1536
R +A+ G++ M +DP +H G+D WL V+ G++D AAAV EA G +P L ++ G++D MG+ ++G++I+ FTL VK + PL QL ST +MQ L P VKE+ A++ N EAA A +LY+ NVNPL GCLPAL Q P+FI LYR+++ + E FLW+PSL+GPTFD ++W+ + DGAP LGWHDT+ YM+IP ILV++Q +S ++ P D P D + ++ + ++ +LP++IGWFSL+VPSALG+YW+ NN +TA+S I+ M P++ +P ++ +P EAL D+ V
Sbjct: 52 RPSASGARGLQAM-VDPGMMH------------GVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETGDPNMKAPKITLP--FMEEEPEVVTMPIPREALPDSAV 394
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: A0A7S3NMM5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMM5_9STRA) HSP 1 Score: 256 bits (654), Expect = 5.740e-74 Identity = 127/267 (47.57%), Postives = 182/267 (68.16%), Query Frame = 1
Query: 778 EQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWLT-TFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIP-SDI-LDSPTADYALP-TVAEALEDAKVNAWPDRRSRR 1566
E ++G I+ FT + + L PL I S++R++AL P +++I ++ +++ A AT +LY+ + NPL GCLP++ Q PVFI LYR+++ + NE F WLPSL+GPTFD GRGI WLT +VDG PSLGWHDTLCY+ +P LV++Q LSM ++ PP D P+D + ++ YLP++IGWFS NVP+ LG+YW+ +NL + SS A KA+ K NPPE++I +D+ LD +A LP T+ EA+ +AK+NA PDR RR
Sbjct: 117 ENTYGWTIILFTFLCRMLTFPLNYISYASSDRVKALKPYMEKIKERYAEDQTAQNIATAKLYEMSATNPLAGCLPSIAQIPVFIFLYRSVLNLAFENELNEPFFWLPSLEGPTFDAGRGIGWLTENWVDGTPSLGWHDTLCYLLVPIALVITQSLSMQIMQPPVD-PNDEGAVRTQRILKYLPLMIGWFSANVPAGLGLYWMTSNLVSVGSSVATKAYLKANPPELDIKLADLGLDDGSAGVKLPNTIEEAIAEAKINAAPDRTPRR 382
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Match: A0A8J6C7A1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7A1_DIALT) HSP 1 Score: 249 bits (637), Expect = 1.280e-72 Identity = 130/311 (41.80%), Postives = 188/311 (60.45%), Query Frame = 1
Query: 547 IDPAAVHSVGDYVNAVSTAGLDHTWLSHVMHGLSDAAAVPLEAVEE---EAKGPNPFALWIEFIRSSVLGINDFYKGMGIEQSFGLAIVSFTLMVKTLLVPLQVIQLQSTERMQALAPTVKEINAKFGQNKEAATAATNRLYKETNVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFDQGRGIAWLT-TFVDGAPSLGWHDTLCYMSIPAILVVSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTASSFAIKAFFKMNPPEMNIPSD 1467
+D +AVHS+ V+ + D +H + + AAA P + A PN F ++ IR+S++ +++ G+ ++ +I FTL VK ++PL Q++ T MQ LAP K++ FG N +A T+ LY E VNPL GCLP+LLQ PVFIGLYRAIIG D V +E FLW+P+L+GP + G G+ WLT +VDG PSLGWHDTLCY+++P +LV+SQ LSM +LTPP G + ++ +LP +IGWF+L+ P+ LG+YW NN+ TTA S I++ P + + P +
Sbjct: 51 VDASAVHSL---VHGLP----DALGATHALLADAAAAAPPADVASAGTGAASDPNIFDQYVSLIRTSIVSLHESLFTAGVPYAYAASIFLFTLCVKLFVLPLNWKQMEGTVAMQKLAPQQKQLQKWFGDNPQALQIQTSMLYSENQVNPLAGCLPSLLQIPVFIGLYRAIIGLSKDNVLSESFLWIPTLEGPVSEYGAGLGWLTDNWVDGHPSLGWHDTLCYLTLPLVLVLSQSLSMRILTPPTVGETSPDAERTQQILKFLPFMIGWFALSAPAGLGLYWFFNNVITTAQSIFIRSMLGAYPGQGSAPDE 354 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1299.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1299.1 >prot_C-linearis_contig11.1299.1 ID=prot_C-linearis_contig11.1299.1|Name=mRNA_C-linearis_contig11.1299.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=397bp MRAFAIAALLGCAAVTPSTAFTGGVGFARTAGSGRQSARSRRAATTTSGVback to top mRNA from alignment at C-linearis_contig11:2399826..2406035- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1299.1 ID=mRNA_C-linearis_contig11.1299.1|Name=mRNA_C-linearis_contig11.1299.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6210bp|location=Sequence derived from alignment at C-linearis_contig11:2399826..2406035- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:2399826..2406035- >mRNA_C-linearis_contig11.1299.1 ID=mRNA_C-linearis_contig11.1299.1|Name=mRNA_C-linearis_contig11.1299.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at C-linearis_contig11:2399826..2406035- (Chordaria linearis ClinC8C monoicous)back to top |