mRNA_C-linearis_contig11.1172.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: D8LKL0_ECTSI (Similar to CG4672-PA isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKL0_ECTSI) HSP 1 Score: 519 bits (1337), Expect = 2.700e-174 Identity = 259/316 (81.96%), Postives = 290/316 (91.77%), Query Frame = 1
Query: 1 MGLALSLLQGGILLGYMVFSIVKAVLPRSFKAPRVGHTTLAVTLLAAAHLLGLPYFLDKLNKAHAYGQLSSIDLRSGCDGDHLHACQGAQVAYRASSVLLLYFLLMATAGGAVHYIYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCVGLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVGIGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKGKTVGLVISLSLLLSTVAWI 948
MGLALSLLQGGILL YMVF++VKAVLPRSFKAPRVGHTTLAVT+LAAAH++GLP+FLDKLN+AHAYGQL S+DLRSGC+ D LH+CQGAQV YRASSVL LYF+LMATAGGAVHYIYANLWPLKFLAVAG +GG LFLPDPA+FGVYAEVARVLSL+WM+FQGFLVLDFAHD+HDAIGAKA+EQDSISGSS SI SS WRILYL+LS ACL AT +GL LFTGH GCTLGA+LAGITL+VG +TT+ SL+ESVGIGLLPPSILFAHSTFLCWYAMS+HPD CNP+A DD SA GK VG+VISL++L++TVAWI
Sbjct: 1 MGLALSLLQGGILLAYMVFTVVKAVLPRSFKAPRVGHTTLAVTMLAAAHVMGLPFFLDKLNQAHAYGQLKSVDLRSGCNDDFLHSCQGAQVVYRASSVLFLYFVLMATAGGAVHYIYANLWPLKFLAVAGGVGGMLFLPDPALFGVYAEVARVLSLVWMLFQGFLVLDFAHDVHDAIGAKAEEQDSISGSSSSICSSWWRILYLVLSGACLAATGLGLATLFTGHVGCTLGASLAGITLAVGVVTTVLSLVESVGIGLLPPSILFAHSTFLCWYAMSSHPDQACNPYAADDVPSASGKGVGVVISLAILVATVAWI 316
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: A0A7S0SSW0_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSW0_9STRA) HSP 1 Score: 199 bits (506), Expect = 1.520e-52 Identity = 137/430 (31.86%), Postives = 219/430 (50.93%), Query Frame = 1
Query: 91 KAPRVGHTTLAVTLLAAAHLLGLPYFLDKLNKAHAYGQLSSIDLRSGCDGDHLHACQGAQVAYRASSVLLLYFLLMATAGGAVHYIYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCVGLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVGIGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKG-KTVGLVISLSLLLSTVAWITWHGEKVLELFGVEGEDSVSLLASSGGP----NINSGSSTDGDG-------------SGGEEVMESRPS-----RVFYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPM--ESLWLKVISQWVCLLLQMRVLWVTYRDN 1305
+A R H + + A +LG + N + Y + +SI+L + C + + C Q+ YRAS L++ F++++ I W LK L + +L + + A F +AE AR++S W++ Q L+LDFAHD+HD + A E++ + I+ + YLL+S L VGL LF + GC LG +TL +G +TTI SL+ V GLL P I+F +S FLCWYA+ ++PD +CNP AGD G K V +V+ + + + + +G K++++F +GE + ++ N+ +G T G EE +E + S R F+ V M ++ AM++TSWG T+G+PE+ S ES+WLK++SQW L+L R+L + Y+ N
Sbjct: 34 QATRFSHLLIILITFTIAIVLGQSF----PNDINGYNEYTSINLTNNCIDSYENECIYRQLIYRASFSLVVLFIILSITSYYSDSINKGFWVLK-LGLTVSLFIGFWWAENAFFSGWAEAARIISFFWLLGQSLLLLDFAHDIHDVMLLTALEEEKEGNDTRHIYGT-----YLLMSIGSLTCAGVGLAYLFIDYTGCRLGMFFTVLTLLIGVITTIVSLLNVVNKGLLTPCIMFGYSVFLCWYALLSNPDESCNPTAGD----VNGTKNVAVVVISIVSIIILMYCVINGTKIVQIFLPDGEGVIKSYNTNAKSKELENVLTGEDTKPTGVASMNMTRDSNSPDNSEESVEIKESGTPNERAFFHVLMIFVCSYGAMILTSWGTTNGAPENYNSYTQSKGNESMWLKIVSQWFFLILYFRILQLAYQSN 449
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: W7TX75_9STRA (TMS membrane protein/tumor differentially expressed protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX75_9STRA) HSP 1 Score: 150 bits (378), Expect = 3.860e-35 Identity = 109/380 (28.68%), Postives = 182/380 (47.89%), Query Frame = 1
Query: 232 CDGDHLHACQGAQVAYRASSVLLLYFLLMATAGGAVHYIYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCVGLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVGIGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKG-KTVGLVISLSLLLSTVAWITWHGEKVLEL--------------FGVEGEDSVSLLASSGGPNINSGSST---DGDGSGGEEVM-------ESRPSRVF-YCVAMACASAFAAMVMTSWGRTDGSPESLGS--SITPMESLWLKVISQWVCLLLQMRVLW 1287
C G+ C G Q YR S V +FL +A V ++ + W LK+L G L G F+ D +F Y +ARV SL++++ Q +++F++++H + K + +S S E+ + ++++YL LS CL G+ L+ +A C L +TL V SL++ +G+GLL PS+LF + + CW A+ ++PDP CN A + AK T ++ L++ L+ W T+ EL GE+ +L G +GD G + ++ S ++ + + +A A+ AM +T+WG +G P+ +G S ES+WLK++SQW+ +LL LW
Sbjct: 76 CTGEFKDRCYGFQAVYRLSFVDFFFFLALALGSKFVVGVHTHAWGLKYLVFLGFLIGMFFV-DNKVFAGYVHLARVASLVYLVAQVVTLINFSYNMHTTLMGKVEAAES---SGETNGAKLYKVIYLCLSLFCLAGGLTGIGLLYAFYAHCRLSQFWITLTLLVSLACLFSSLLDRIGMGLLTPSVLFLYFDYQCWSAILSNPDPACNKTASLASSKAKSWNTAVALVFLAVSLTYTGWSTYRSIVGTELQPEQVAAXXXXXXXXXXXGENLTKILTGEGDTTXXXXXXXXXEEGDEEKGGAAVPTLTAADQAEASLIWIFHLLLALGGAYMAMAITNWGNANGIPDGVGDGDSTVGRESMWLKIVSQWITMLLYAWSLW 451
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: A0A1V9Z1N2_9STRA (Serine incorporator-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1N2_9STRA) HSP 1 Score: 137 bits (346), Expect = 1.380e-31 Identity = 115/398 (28.89%), Postives = 182/398 (45.73%), Query Frame = 1
Query: 124 VTLLAAAHLLGLPYFLDKLNKAHAYGQLSSIDLRSGCDGDHLHACQGAQVAYRASSVLLLYFLLMATAGGAVHYIYAN---LWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHD-------AIGAKADEQDSISGSSESIFSSG-WRILYLLLSTACLVATCVGLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVGIGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKGKTVGLVISLSLLLSTVAWITWHGEKVLELFGVEGEDSVSLLASSGGPNINSGSSTDGDGSGGEEVMESRPSRVFYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPMESLWLKVISQWVCLLLQMRVL 1284
+T LA L + L +A G L + GCD C G Q YRAS + +FLLM +AN LW + A L + F+P A F YA +ARV S+++++ Q +++DF +++ D A A A+ S+ GSS S W+ +YL + CL G+ L+ + GC++G TL + T S+ E G G++PPSI+ A++ LC+ A++ +PD TCNP +A S ++S L +T+ W +W S S ASS + ST+ + G++ PS F+ + M + AMV+T WG G + + ++W+++ SQW+ LLL + L
Sbjct: 1 MTRLAYTALFFVNALLATAMRAFGDGWLKHLWSFDGCDTASDVHCVGNQAVYRASFAICCFFLLMVVLSALSERGHANCCCLWCFQLPAYVTLLVLSFFIPS-AFFDGYAWLARVASVVFLVLQIIIIIDFMYNVRDYLLDRIEAAEADAETTASLLGSSTPANKSWVWKSVYLTIVLVCLGGAFTGIALLYKYYGGCSIGMAFTTTTLVTILIATGISITEWAGTGIMPPSIVAAYAVLLCYQALAANPDATCNPLLTYEAASH----ANTILSSLLGAATITWTSW---------------STSSSASSA---LQINRSTETEEKDGDKAAADTPSWQFHLI-MVFGGLYMAMVLTQWGSLHGLADDV--------NMWVQIASQWIVLLLYVWTL 366
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: A0A7S2G1L1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G1L1_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.450e-18 Identity = 82/320 (25.62%), Postives = 136/320 (42.50%), Query Frame = 1
Query: 442 AEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCV-GLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVGIGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKGKTVGLVISLSLLLSTVAWITWHGEKVLELFGVE--------------------------------------------GEDSVSLLASSGGPNINSGSSTDGDGSGGEEVM---ESRPSRVFYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPMESLWLKVISQWV 1257
A + R LS W+ Q LV++ + L+D I S +S I L+L++ A + G T L+ +AGC G T+ + L S+++SVG+GLLP ++LFA+S F+CWYA+ + CNP A L + K+ + + + + ++ + G K++ + E ED+ + + NS G + M E + VF+ M + M +TSWGRTDG+PE++GSS+ P +SL++K+ QW+
Sbjct: 26 ANITRFLSFFWLCAQSLLVIELSFQLNDYIA---------SNNSGGI---------LVLASGLFAAAGIWGCTVLYDSYAGCEEGWWFVNTTVVMSVLAMGLSVVDSVGVGLLPGTVLFAYSVFMCWYALLSATSLECNPTADKSELDSHQKSRAFWMVMGVTGVCMGFMIYTGSKIITILTGEEVTSVGDVVAQKEAAAAAQPGMDEILTSDVSDKTPLKVQPKAEPDEDAADATPDTTQTDSNSACCCAGLATSKPSEMNLGEPKEETVFFHFLMLILIMYCTMTLTSWGRTDGAPEAVGSSVEPDQSLYIKISVQWL 327
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: A0A6P3XB89_DINQU (probable serine incorporator isoform X1 n=14 Tax=Ponerini TaxID=141711 RepID=A0A6P3XB89_DINQU) HSP 1 Score: 95.1 bits (235), Expect = 7.930e-17 Identity = 124/485 (25.57%), Postives = 200/485 (41.24%), Query Frame = 1
Query: 1 MGLALSLLQGGILLGYMVFSIVKAVLP--RSFKAPRVGHTTLAVTLLAAAHLLGLPYFLDKLNK----AHAYGQLSSIDLRSGCDGDHLHACQGAQVAYRASSVLLLYFLLMATAGGAVHY-------IYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYL---LLSTACLVATCVGLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVG-----IGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWA-----GDDALSA------KGKTVGLVISLSLLL-------STVAWITWHGEKVLELFG-VEGEDSVSLLASSGGPNINSGSSTDGDGSGGEEVMESRPSRV-----FYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPMESLWLKVISQWVCLLLQM-RVLWVTYRDNRDSS 1317
MGL S Q L G S + P R+ + R+ + L + AA + P + L K A++ + CD + G YR +L LYF LM+ V I W +K+L + G + GA F+P+ + + + L++I Q L++DFAH DA +E +S GW L + A +A V L FT C L L + +T+I S++ SV GLL S++ + +L W +SN PD CNP G D + K +GL+I S +L S + IT +++ G V SL+ + + G + D +G +V ++ +V F+ + A A+ + M +T+W R + + ++L S+ S+W+K+IS W+CL L + ++ T NRD S
Sbjct: 1 MGLVCSTAQLACLCGSTACSFCCSQCPSCRNSTSTRIMYALLLMLGTIAACITLAPGLQNALKKVPFCANSSNGYVPSQITVDCD-----SAVGYLAVYRICFILSLYFFLMSVIMIRVRSSQDPRAAIQNGFWAIKYLLIIGGIIGAFFIPERSFGATWMYFGMIGGFLFIIIQLILIVDFAHSWADAWVGNYEESES----------KGWYAALLGATFFNYAVSIAGAVLLYVYFTHEGICGLNKFFISFNLILCVITSIISVLPSVQEHQPRSGLLQSSVVTLYVVYLTWSGVSNSPDHKCNPGFFGIINGHDVSAQNRVAFDKESIIGLIIWFSCVLYSSLRTASKSSKITMSENVLVQDNGAVRNAGEQSLIGNEDYTKVE-GRNHDAEGGSDAKVWDNEEDKVAYNWSFFHLMFALATLYVMMTLTNWYRPNSNLDTLNSNAA---SMWVKIISSWMCLGLYVWSLIAPTVFPNRDFS 466
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: UPI000623B455 (probable serine incorporator isoform X1 n=4 Tax=Linepithema humile TaxID=83485 RepID=UPI000623B455) HSP 1 Score: 94.7 bits (234), Expect = 1.010e-16 Identity = 116/460 (25.22%), Postives = 192/460 (41.74%), Query Frame = 1
Query: 1 MGLALSLLQGGILLGYMVFSIVKAVLP--RSFKAPRVGHTTLAVTLLAAAHLLGLPYFLDKLNKAHAYGQLSSI---DLRSGCDGDHLHACQGAQVAYRASSVLLLYFLLMATAGGAVHY-------IYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYL---LLSTACLVATCVGLTALFTGHAGCTLGATLAGITLSVGALTTIFSLIESVG-----IGLLPPSILFAHSTFLCWYAMSNHPDPTCNPWA------GDDALSAKGKTVGLVISLSLLL-------STVAWITWHGEKVLELFG-VEGEDSVSLLASSGGPNINSGSSTDGDGSGGEEVMESRPSRV-----FYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPMESLWLKVISQWVCL 1263
MGL S Q L G S + P R+ + R+ + L + AA + P + L K S+ D CD + G YR +L LYF LM+ V I W +K+L + G + GA F+P+ + + + LL++I Q L++DFAH DA +E +S GW L LL+ + +A V L +T C L L + +T+I S++ +V GLL S++ + +L W +SN PD CNP D K +GL+I S +L S + IT +++ G V+ SL+++ + G + D + +V ++ +V F+ + A A+ + M +T+W + + S E+L ++ S+W+K++S W+CL
Sbjct: 1 MGLVCSTAQLACLCGSTACSFCCSQCPSCRNSTSTRIMYALLLLLGTIAACITLAPGLQNALKKVPFCANSSNYVPSDFTFDCD-----SAVGYLAVYRICFILSLYFFLMSVIMIRVKSSRDPRAAIQNGFWAIKYLLIIGGIVGAFFIPEGSFGPTWMYFGMLGGLLFIIIQLILIVDFAHSWADAWVGNYEETES----------KGWYFALLATTLLNYSISIAGAVLLYIYYTHANTCALNKFFISFNLILCVITSIISVLPTVQEHQPRSGLLQSSVVTLYVLYLTWSGISNSPDHECNPGMLGILSRKDHVAFDKESIIGLIIWFSCVLYSSLRTASKSSKITMSENILVQDNGAVKNAGEQSLISNEDYTTVE-GRNPDAENGSDAKVWDNEEDKVAYNWSFFHLMFALATLYVMMTLTNWYKPNSSLETLNANAA---SMWVKILSSWMCL 441
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: D6WM99_TRICA (Serine incorporator 1-like Protein n=8 Tax=Tribolium TaxID=7069 RepID=D6WM99_TRICA) HSP 1 Score: 94.4 bits (233), Expect = 1.370e-16 Identity = 92/369 (24.93%), Postives = 162/369 (43.90%), Query Frame = 1
Query: 262 GAQVAYRASSVLLLYFLLMATAGGAVHY-------IYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCVGLTALF---TGHAGCTLGATLAGITLSVGALTTIFSLIESVG-----IGLLPPSILFAHSTFLCWYAMSNHPDPTCNPW------AG----DDALSAKGK-TVGLVISLSLLLSTVAWITWHGEKVLELFGVEGEDSVSLLASSGGPNINSGSSTDGDGS--GGEEVMESRPSRV-----FYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPMESLWLKVISQWVCLLL 1269
G YR VL +F+LMA V I W LK+L V G + GA F+P+ + + + L+++ Q L++DFAH +A +E +S GW L ++ T G+ LF T GC L L + + + S++ +V GLL S++ + T+L W A++N P+ +CNP AG D+ ++ G+ VGL++ + +L + K+ + +D+ ++ S + + DGDG G ++V ++ V F+ + A A+ + M +T+W + + S S+ S+W+K+IS W+C++L
Sbjct: 92 GYLAVYRICFVLTCFFVLMAVMMIRVKSSRDPRSGIQNGFWGLKYLLVIGGIIGAFFIPEGSFGETWMYFGMIGGFLFILIQLILIIDFAHSWAEAWVGNYEETES----------KGWYFALLAITFLNYALTITGIVLLFVFFTKSDGCDLNKFFISFNLILSVIVSAISILPAVQDKLPRSGLLQSSVVSLYVTYLTWSAVANSPESSCNPGLLGIVGAGSTKKDNEMTFDGEGIVGLIVWMCCVLYSSLRSASQSSKITMSENMLVKDNGAVRGSGSDNLVENEGRDDGDGGEKGEKKVWDNEEESVAYSWSFFHIMFALATLYVMMTLTNWYKPNSSLSKANSA-----SMWIKMISSWLCVIL 445
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: A0A7S0J283_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J283_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 1.610e-16 Identity = 106/367 (28.88%), Postives = 159/367 (43.32%), Query Frame = 1
Query: 256 CQGAQVAYRASSVLLLYF----LLMATAGGAVHYIYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCVGLTALFT--GHAGCTLGATLAGITLSVGALTTIFSLIESVGIG-LLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKGKTVGLVISLSLLLSTVAWITWHGEKVLELFGVEGEDSVSLLASSGGPNINSGSSTDGDGSGGEEVMESRPSRVFYCVAMACASAFAAMVMTSWGRT----DGSP--ESLGSSITPMESLWLKVISQWVCLLLQMRVLWVTY--RDNRD 1311
C G YR S VL L+F LL A + W K + G L LF+ D + Y EVAR LSLL+++ Q L++D A+ ++ + ++ D GW++ +L S V + L+ G +GC ++ IT+ T S + G LL + + A++TFL + A+++HPD CNP A SA G VGLVI+ + ST G K + G D L + ++ DG+G +EV E + MA S + AM++T W +G P + G + S W+K+ SQWV L L L Y R++RD
Sbjct: 135 CGGVFSVYRFSFVLALFFGFFALLTAVPSKFAARAHRGFWIAKIFLLVGLLVSTLFI-DNSTLETYREVARYLSLLFLLLQILLLIDVAYTWNETWLSYDEDADDER-------CCGWKLAIILSSAVLYVGSITAWVLLYVYFGASGCPAQQSVISITIVFSLALTAVSCSKYAPHGTLLTSASVTAYATFLAYSALASHPDAQCNPLAHSGE-SASGLVVGLVIAAVSMASTA--YNAAGSKQAVMGKEHGTDLDKPLDDT---------TSRSDGNGEDEVEEXXXXXXH--LMMAACSLYMAMLLTDWTTQPAFENGVPLTGTSGDWSVGLASFWVKLSSQWVALALYGWTLLAPYCLRESRD 479
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Match: A0A7R9YLD3_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YLD3_DIALT) HSP 1 Score: 93.2 bits (230), Expect = 2.940e-16 Identity = 98/366 (26.78%), Postives = 158/366 (43.17%), Query Frame = 1
Query: 256 CQGAQVAYRASSVLLLYFL----LMATAGGAVHYIYANLWPLKFLAVAGTLGGALFLPDPAMFGVYAEVARVLSLLWMIFQGFLVLDFAHDLHDAIGAKADEQDSISGSSESIFSSGWRILYLLLSTACLVATCVGLTA-----------LFTGHAGCTLGATLAGITLSVGALTTIFSLIESVGIG-LLPPSILFAHSTFLCWYAMSNHPDPTCNPWAGDDALSAKGKTVGLVISLSLLLSTVAWITWHGEKVLELFGVEGEDSVSLL---ASSGGPNINSGSSTDGDGSGGEEVMESRPSRVFYCVAMACASAFAAMVMTSWGRTDGSPESLGSSITPMESLWLKVISQWVCLLLQMRVLWVTY 1296
C G + YR S + +FL L A GG ++ W +K A++ TLG A F A+F +A V+RV S+L++++QG L++DFA+ + + +E D +F WR A ++A CVGL A L+T AGC + +TL L T+ + G LLP +++ A +LC+ A+++ P CNP+A G + + + LL++ V+ I W E + + +LL ASS D G+ + VF+ + MA + + ++T WG + S WLKV +QW +L+ L Y
Sbjct: 101 CAGNEAVYRVSGSMCAFFLALAALCACPGGIGASLHRGYWAVKLFALS-TLGTAAFWVPNAVFDAFASVSRVASILFVLYQGLLLIDFAYGWNARWVSLDEEAD--------VFQ--WR--------AGILAVCVGLYACCFTAIGFMYSLYTA-AGCGFSTAIITVTLLSILLFTLVGVSPLSPHGALLPSAVIAADCVYLCYAALASSPLEQCNPFASAHG----GGQESMHLIVGLLMAGVS-IAWKANSAATSLSAEQQPASTLLPLSASSAAATSEVMPVVDAAGAEDDASAPLEGDAVFFHLMMAVSCMYFGTLLTDWGTASPEHGDISQYDVGWASAWLKVGTQWSIILMYSWTLVAPY 441 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig11.1172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1172.1 >prot_C-linearis_contig11.1172.1 ID=prot_C-linearis_contig11.1172.1|Name=mRNA_C-linearis_contig11.1172.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=445bp MGLALSLLQGGILLGYMVFSIVKAVLPRSFKAPRVGHTTLAVTLLAAAHLback to top mRNA from alignment at C-linearis_contig11:497598..505066+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig11.1172.1 ID=mRNA_C-linearis_contig11.1172.1|Name=mRNA_C-linearis_contig11.1172.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7469bp|location=Sequence derived from alignment at C-linearis_contig11:497598..505066+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig11:497598..505066+ >mRNA_C-linearis_contig11.1172.1 ID=mRNA_C-linearis_contig11.1172.1|Name=mRNA_C-linearis_contig11.1172.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2670bp|location=Sequence derived from alignment at C-linearis_contig11:497598..505066+ (Chordaria linearis ClinC8C monoicous)back to top |