|
|
Homology
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: D8LKK9_ECTSI (Kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK9_ECTSI) HSP 1 Score: 720 bits (1859), Expect = 1.270e-249 Identity = 354/429 (82.52%), Postives = 387/429 (90.21%), Query Frame = 3
Query: 162 GAGRDKNVSVAVVAAVLGVSMAGALAFAYTRPADNKWRQRIFGRGVTTLGSSLDPAEEAGMRARANDRALKNLGVRELNLGSLPEGAKIVNLPNQVGGHKMMKSVPALLLLEWEGKGAGGKPARFVLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEELLEVTAAAPDAPLDVDALSAKLEFMTNVKNNYVDDA 1448
G G K VA VLGVS+ GALAFAY+RPADNKWR+ IFG+ +TTLGSSLD A EAGMRA ANDRALK+LG RELNLGSLP GAKIVNLPNQVGGHK MKSVPALLLLEWEGKG GG ARFVLKILHDGGRGLVELGFYENLA HAEGPGAQGKEPERTELASFLCPYFGAVKV+TD H E+DGEVIEPTC+ FL+L+DLC+GLDNPCALDVKMGRVTVEPGEREEKKIGQL+KYPNQP+VGFRYVGMSWSS+FEGDQ P+K+S K WGAGM++E+TG GLARFF+DGTRLRRGRVK ALRK+RA+ DFF+RQKIFKFYASSLLLTYDSADP PG + EEEVAVCMIDFAHAVPVDGDGELGEGPA+APGDKGYLYGA+NL+GIMEELLEVTA PDAP+++ A+SAKLEFMTN+K NYV DA
Sbjct: 51 GVGEKKAQYTVGVAIVLGVSLVGALAFAYSRPADNKWRKLIFGQEITTLGSSLDAAAEAGMRAMANDRALKHLGHRELNLGSLPPGAKIVNLPNQVGGHKTMKSVPALLLLEWEGKGKGGGSARFVLKILHDGGRGLVELGFYENLARHAEGPGAQGKEPERTELASFLCPYFGAVKVRTDGHTEDDGEVIEPTCMHFLILEDLCSGLDNPCALDVKMGRVTVEPGEREEKKIGQLRKYPNQPMVGFRYVGMSWSSFFEGDQVPEKISQSKKWGAGMAVEDTGGGLARFFYDGTRLRRGRVKCALRKIRAVRDFFARQKIFKFYASSLLLTYDSADPTLPG-DVEEEVAVCMIDFAHAVPVDGDGELGEGPAEAPGDKGYLYGAENLVGIMEELLEVTAEEPDAPMELSAISAKLEFMTNLKKNYVADA 478
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A0R3S4R6_9BILA (Kinase n=1 Tax=Elaeophora elaphi TaxID=1147741 RepID=A0A0R3S4R6_9BILA) HSP 1 Score: 120 bits (300), Expect = 4.120e-26 Identity = 79/268 (29.48%), Postives = 133/268 (49.63%), Query Frame = 3
Query: 537 VLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
+LK + +G RG+ E+ FY NL + + E A F+ ++G +KT R +++ E F+V++DL PC +D+KMGRVT +P + K++ + KYP Q +GFR G + F ++ ++ K WG +LEN F +R V+ L ++ L +F+ Q+++ FYASS+LL Y++ +E++ V + +IDF+H P +G D YL+G N+I I+E+
Sbjct: 50 LLKPVQEGVRGVCEVAFYNNLKHQND------ENDVLMEFAIFVPKFYG---LKTLRIGKKEVE--------FIVMEDLTYRYKYPCIMDIKMGRVTYDPNATKAKRLAEAIKYPEQETLGFRLAG--YRMRFGCNKNDLRIR-DKQWGRSRNLENIVDAFREFLSGRIMEKRFVVEQTLEQLYKLRKWFNSQRVYHFYASSILLAYEAC------MEQQPNVLIKLIDFSHVFPANGTI-----------DDNYLFGLNNVINIIEK 280
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A044TL98_ONCVO (Kinase n=4 Tax=Onchocerca TaxID=6281 RepID=A0A044TL98_ONCVO) HSP 1 Score: 119 bits (299), Expect = 5.840e-26 Identity = 80/268 (29.85%), Postives = 128/268 (47.76%), Query Frame = 3
Query: 537 VLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
+LK + +G RG+ E+ FY +L + + TE A F+ + G ++ G+ +E F+V++DL PC +D+KMG+VT +P + KK+ + KYP Q V+GFR G + +F G ++ K WG ++EN F + + L ++ L +FS Q+I+ FYASS+LL Y++ PP V V +IDF+H P +G D YL+G N+I I+E+
Sbjct: 48 LLKPVQEGVRGVCEIAFYNSLKHQND------ENDVLTEFALFVPKFHGLKTLRVG------GKEME-----FIVMEDLTYHYKYPCIMDIKMGKVTYDPSATKAKKLSEAVKYPEQEVLGFRLTG--YRMHF-GCRENDVRVRDKQWGRSRNMENIAEAFCEFLSGRLMEKSFVARQTLEQLCKLRKWFSSQRIYHFYASSILLIYEACMERPPN------VFVKLIDFSHVFPANG-----------AVDHNYLFGLNNVINIVEK 278
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A8J2PZU3_9BILA (Kinase n=1 Tax=Cercopithifilaria johnstoni TaxID=2874296 RepID=A0A8J2PZU3_9BILA) HSP 1 Score: 119 bits (299), Expect = 6.100e-26 Identity = 78/268 (29.10%), Postives = 131/268 (48.88%), Query Frame = 3
Query: 537 VLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
+LK + +G RG+ E+ FY NL + + T+ A F+ ++G ++ G+ +E F+V++DL PC +D+KMGRVT +P + K++ + KYP Q +GFR G + +F D+ ++ K WG +LEN FF T + L ++ L +F+ Q+++ FYASS+LL Y+++ PP V V +IDF+H P +G D YL+G ++I ++E+
Sbjct: 50 LLKPVQEGVRGVCEVTFYNNLKYRND------ENDVLTKFAVFVPKFYGLKTLRVG------GKELE-----FIVMEDLACRYKCPCIMDIKMGRVTYDPNATKAKRLSEAVKYPEQETLGFRLTG--YRMHFGCDKNDLRVR-DKQWGKSRNLENIVDAFREFFSGRTMEKSYVAVQTLEQLYKLRKWFNSQRVYHFYASSILLAYEASMERPPN------VLVKLIDFSHVFPANG-----------AIDDNYLFGLNSVINVIEK 280
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: F1L1V0_ASCSU (Kinase n=1 Tax=Ascaris suum TaxID=6253 RepID=F1L1V0_ASCSU) HSP 1 Score: 118 bits (296), Expect = 1.420e-25 Identity = 84/280 (30.00%), Postives = 133/280 (47.50%), Query Frame = 3
Query: 522 KPARFVLKILHDGGRGLVELGFYENLASHA--EGPGAQGKEPERTE-----LASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
K + +LK + DG RG E+ Y ++ + P Q + ER + A F+ YFG + I P ++ LV++DL PC +D+KMG+VT +P + K+I + KYP Q +GFR +G EGD P ++ K WG +LEN F + + L ++ A+ ++F Q+I+ FYASS+L+ Y+++ LE V V +IDF+H P + Q P D+ YL+G N+I +E+
Sbjct: 40 KGSALLLKPVQDGVRGQCEVALYNSVRNWIVEAAPKGQKNQLERDKHVMIKFAEFVPKYFGLKTI-----------FIGPKEVQCLVMEDLTYQYRQPCTMDIKMGKVTYDPNASDAKRISETIKYPAQETLGFRLLGYRMHCT-EGD--PPRVR-DKLWGRSKTLENIVDAYGEFLSGRSGEENRVAEEVLSQLIAIREWFKEQRIYHFYASSILIVYEAS------LERPARVRVRLIDFSHVFPAE----------QRP-DENYLFGLNNMITFVEQ 287
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A1P6CCV5_BRUMA (Kinase n=4 Tax=Brugia TaxID=6278 RepID=A0A1P6CCV5_BRUMA) HSP 1 Score: 114 bits (286), Expect = 3.160e-24 Identity = 77/269 (28.62%), Postives = 127/269 (47.21%), Query Frame = 3
Query: 537 VLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRV-KFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
+LK + +G RG+ E+ FY +L + T A F+ ++G ++ R E F+V++DL PC +D+KMGRVT +P + K++ + KYP Q +GFR G + F ++ ++ K WG +LEN F G + + V + L ++ L +F+ Q+++ FYASS+LL Y++ PP V + +IDF+H P +G D YL+G N+I I+E+
Sbjct: 50 LLKPVQEGVRGVCEVAFYSSLKH------LNDENDVLTRFAVFVPKFYGLKTLRVGRKEME-----------FIVMEDLAYRYKCPCIMDIKMGRVTYDPSATKAKRLSEAIKYPEQETLGFRLTG--YRMRFGHNENDLRIR-DKQWGRSRNLENVVDAFREFL-SGRLMEKSLVAEQTLEQLYKLRKWFNSQRVYHFYASSILLAYEACVERPPN------VLIKLIDFSHVFPANG-----------AIDDNYLFGLNNVINIVEK 280
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A3P7ED91_WUCBA (Protein kinase domain-containing protein n=1 Tax=Wuchereria bancrofti TaxID=6293 RepID=A0A3P7ED91_WUCBA) HSP 1 Score: 119 bits (297), Expect = 1.320e-23 Identity = 78/281 (27.76%), Postives = 130/281 (46.26%), Query Frame = 3
Query: 537 VLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEELLEVTAAAPDAPL 1379
+LK + +G RG+ E+ FY +L + T A+F+ ++G ++ R E F+V++DL PC +D+KMGRVT +P + K++ + KYP Q +GFR G + F ++ ++ K WG +LEN F + + L ++ L +F+ Q+++ FYASS+LL Y++ PP V V +IDF+H P +G D YL+G N+I I+E+ + + P A +
Sbjct: 49 LLKPVQEGVRGVCEVAFYSSLKH------LNDENDVLTRFAAFVPKFYGLKTLRVGRKEME-----------FIVMEDLAYRYKCPCIMDIKMGRVTYDPSATKAKRLSEAIKYPEQETLGFRLTG--YRMRFGRNENDLRVR-DKQWGRSRNLENVVDAFREFLSGRLMEKSSVAEQTLEQLYKLRKWFNSQRVYHFYASSILLAYEACVERPPN------VLVKLIDFSHVFPANG-----------AVDDNYLFGLNNVINIVEKYRDSFDSGPFAEI 292
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A1I7VJ03_LOALO (Kinase n=2 Tax=Loa loa TaxID=7209 RepID=A0A1I7VJ03_LOALO) HSP 1 Score: 112 bits (280), Expect = 2.390e-23 Identity = 78/268 (29.10%), Postives = 129/268 (48.13%), Query Frame = 3
Query: 537 VLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
+LK + +G RG+ E+ FY NL H G T+ + F+ ++G ++ G+ +E F+V++DL + PC +D+KMGRVT +P + K++ + KYP Q +GFR G + F ++ ++ K WG +L N F + V+ L ++ L +F+ Q+I+ FYASS+LL Y++ PP V V +IDF+H P +G D YL+G ++I I+E+
Sbjct: 50 LLKPVQEGVRGVCEVAFYNNL-KHQNDDG-----DVLTKFSIFVPKFYGLKTLRIG------GKEVE-----FIVMEDLTHRYKCPCIMDIKMGRVTYDPSATKAKRLSEAVKYPEQETLGFRLTG--YRMRFGCNENDLRVR-DKQWGRSRNLGNIVDAFREFLSGRFMEKSFVVEQTLEQLYMLRKWFNSQRIYHFYASSILLGYEACVEQPPN------VLVKLIDFSHVFPANG-----------AVDDNYLFGLNSVINIIEK 280
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A183UF23_TOXCA (Kinase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UF23_TOXCA) HSP 1 Score: 112 bits (279), Expect = 2.480e-23 Identity = 78/280 (27.86%), Postives = 129/280 (46.07%), Query Frame = 3
Query: 522 KPARFVLKILHDGGRGLVELGFYE-------NLASHAEGPGAQGKEPERTELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEE 1340
K + F+LK + DG RG E+ Y ++ S A + + F+ YFG +KT R +D ++ LV++DL PC +D+K+GRVT +P + K+ + KYP Q +GFR +G EG+ P ++ K WG S EN F R + L ++ ++ ++F Q+I+ F+ASS+L+ +++ PP V V +IDF+H PA+ D+ YL+G N+I +++
Sbjct: 40 KGSEFLLKPVQDGVRGQCEIALYNWVNDWLTDVISKASTKQCESDRRVILKFTEFVPKYFG---LKTIRIGSKD--------VQCLVMEDLTYRYRQPCTMDIKIGRVTYDPNANDAKRFAETVKYPAQETLGFRILGYRMHCV-EGE--PPRIR-DKLWGRSRSPENIVDAYGEFLSGRQGEERKVTEEVLSQLNSIREWFMEQRIYHFFASSILIIFEACKERPP------RVCVRLIDFSHVF-----------PAEEKRDENYLFGLSNMITFIKQ 287
BLAST of mRNA_C-linearis_contig11.1171.1 vs. uniprot
Match: A0A1I8A1B3_9BILA (Kinase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8A1B3_9BILA) HSP 1 Score: 111 bits (277), Expect = 5.470e-23 Identity = 92/293 (31.40%), Postives = 129/293 (44.03%), Query Frame = 3
Query: 522 KPARFVLKILHDGGRGLVELGFYENLA-----SHAEGPGAQGKEPERT----------ELASFLCPYFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRVTVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQKSWGAGMSLENTGSGLARFFHDGTRL---RRGRVKFALR-KVRALADFFSRQKIFKFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGPAQAPGDKGYLYGAKNLIGIMEEL 1343
K +LK++ +G RG E+ Y LA S E G +E + +LASF+ Y G KV E F+ L+DL PC +D+KMG+VT +P EK ++ KYP Q +GFR +G Y + K WG EN F+D +L RR +V + ++R + ++FSRQ+I+ FYASSLL YDS DP GL + V MIDF+H PA D+ YL+G + I + L
Sbjct: 49 KRGDLILKLVQEGVRGECEVQVYTRLAELRNQSTVEDGGDGDQEKDDVVVNENKIIIQQLASFVPTYHGLTKVALGNKERE-----------FMKLEDLTVRFRCPCIMDIKMGKVTFDPLATAEKSAREMSKYPEQQKLGFRILG-----YRLHKSNDDVMIADKKWGLSWKFENIDDA----FNDYMQLTDDRRTQVLSIFKDRLREIHEWFSRQRIYHFYASSLLFIYDS-DPTEEGLLAD----VRMIDFSHTF-----------PACKSTDQNYLFGLNRICEIFDRL 305
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 718.0 |
| Seed ortholog evalue | 2.8e-204 |
| Seed eggNOG ortholog | 2880.D8LKK9 |
| Preferred name | IPMK |
| KEGG rclass | RC00002,RC00078,RC01938 |
| KEGG ko | ko:K00915 |
| KEGG Reaction | R03478,R05800,R05801,R10065,R10953 |
| KEGG Pathway | ko00562,ko01100,ko04070,ko04138,map00562,map01100,map04070,map04138 |
| KEGG Module | M00132 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000823,GO:0000824,GO:0000825,GO:0001838,GO:0001841,GO:0002009,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006066,GO:0006793,GO:0006796,GO:0007275,GO:0007399,GO:0007444,GO:0008150,GO:0008152,GO:0008440,GO:0009058,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009987,GO:0016301,GO:0016310,GO:0016331,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019751,GO:0021915,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032958,GO:0035148,GO:0035239,GO:0035295,GO:0043009,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043647,GO:0044237,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046165,GO:0046173,GO:0047326,GO:0048513,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0051765,GO:0051766,GO:0060429,GO:0060562,GO:0070013,GO:0071704,GO:0072175,GO:0090407,GO:1901576,GO:1901615,GO:1901617 |
| EggNOG free text desc. | inositol phosphate biosynthetic process |
| EggNOG OGs | KOG1620@1,KOG1620@2759 |
| Ec32 ortholog description | Inositol polyphosphate kinase |
| Ec32 ortholog | Ec-16_003350.1 |
| EC | 2.7.1.140,2.7.1.151 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
| Exons | 7 |
| Model size | 3161 |
| Cds size | 1377 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927432.5893443-UTR-C-linearis_contig11:483918..485628 | 1622927432.5893443-UTR-C-linearis_contig11:483918..485628 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig11 483919..485628 - |
| 1690879696.5651703-UTR-C-linearis_contig11:483918..485628 | 1690879696.5651703-UTR-C-linearis_contig11:483918..485628 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig11 483919..485628 - |
| 1622927432.6896396-UTR-C-linearis_contig11:497370..497444 | 1622927432.6896396-UTR-C-linearis_contig11:497370..497444 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig11 497371..497444 - |
| 1690879696.644544-UTR-C-linearis_contig11:497370..497444 | 1690879696.644544-UTR-C-linearis_contig11:497370..497444 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig11 497371..497444 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927432.6010234-CDS-C-linearis_contig11:485628..485760 | 1622927432.6010234-CDS-C-linearis_contig11:485628..485760 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 485629..485760 - |
| 1690879696.5789707-CDS-C-linearis_contig11:485628..485760 | 1690879696.5789707-CDS-C-linearis_contig11:485628..485760 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 485629..485760 - |
| 1622927432.6148582-CDS-C-linearis_contig11:486040..486335 | 1622927432.6148582-CDS-C-linearis_contig11:486040..486335 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 486041..486335 - |
| 1690879696.5883508-CDS-C-linearis_contig11:486040..486335 | 1690879696.5883508-CDS-C-linearis_contig11:486040..486335 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 486041..486335 - |
| 1622927432.626285-CDS-C-linearis_contig11:486622..486798 | 1622927432.626285-CDS-C-linearis_contig11:486622..486798 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 486623..486798 - |
| 1690879696.5995326-CDS-C-linearis_contig11:486622..486798 | 1690879696.5995326-CDS-C-linearis_contig11:486622..486798 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 486623..486798 - |
| 1622927432.6363885-CDS-C-linearis_contig11:487058..487271 | 1622927432.6363885-CDS-C-linearis_contig11:487058..487271 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 487059..487271 - |
| 1690879696.6076832-CDS-C-linearis_contig11:487058..487271 | 1690879696.6076832-CDS-C-linearis_contig11:487058..487271 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 487059..487271 - |
| 1622927432.6487641-CDS-C-linearis_contig11:487933..488122 | 1622927432.6487641-CDS-C-linearis_contig11:487933..488122 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 487934..488122 - |
| 1690879696.61591-CDS-C-linearis_contig11:487933..488122 | 1690879696.61591-CDS-C-linearis_contig11:487933..488122 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 487934..488122 - |
| 1622927432.6627219-CDS-C-linearis_contig11:488468..488643 | 1622927432.6627219-CDS-C-linearis_contig11:488468..488643 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 488469..488643 - |
| 1690879696.6259873-CDS-C-linearis_contig11:488468..488643 | 1690879696.6259873-CDS-C-linearis_contig11:488468..488643 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 488469..488643 - |
| 1622927432.6777637-CDS-C-linearis_contig11:497173..497370 | 1622927432.6777637-CDS-C-linearis_contig11:497173..497370 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 497174..497370 - |
| 1690879696.6354187-CDS-C-linearis_contig11:497173..497370 | 1690879696.6354187-CDS-C-linearis_contig11:497173..497370 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig11 497174..497370 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig11.1171.1 >prot_C-linearis_contig11.1171.1 ID=prot_C-linearis_contig11.1171.1|Name=mRNA_C-linearis_contig11.1171.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=459bp
MKSSIDVSSRVLSSPCGHGDEAAILALSGGAGRDKNVSVAVVAAVLGVSM
AGALAFAYTRPADNKWRQRIFGRGVTTLGSSLDPAEEAGMRARANDRALK
NLGVRELNLGSLPEGAKIVNLPNQVGGHKMMKSVPALLLLEWEGKGAGGK
PARFVLKILHDGGRGLVELGFYENLASHAEGPGAQGKEPERTELASFLCP
YFGAVKVKTDRHVEEDGEVIEPTCIRFLVLQDLCNGLDNPCALDVKMGRV
TVEPGEREEKKIGQLKKYPNQPVVGFRYVGMSWSSYFEGDQQPQKLSMQK
SWGAGMSLENTGSGLARFFHDGTRLRRGRVKFALRKVRALADFFSRQKIF
KFYASSLLLTYDSADPAPPGLEEEEEVAVCMIDFAHAVPVDGDGELGEGP
AQAPGDKGYLYGAKNLIGIMEELLEVTAAAPDAPLDVDALSAKLEFMTNV
KNNYVDDA* back to topmRNA from alignment at C-linearis_contig11:483919..497444- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig11.1171.1 ID=mRNA_C-linearis_contig11.1171.1|Name=mRNA_C-linearis_contig11.1171.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=13526bp|location=Sequence derived from alignment at C-linearis_contig11:483919..497444- (Chordaria linearis ClinC8C monoicous)
GCTCTTTCTGCGGTCTGCGGTGCGCACACACTCCACGCAAGATAGTCTAT
AGCCGCAACAACGGCATCTATCCCATGAAGTCTTCAATCGATGTCAGTAG
CCGAGTTTTGTCGTCCCCCTGCGGACATGGAGATGAAGCGGCAATCCTGG
CGCTGTCGGGAGGCGCGGGGCGCGACAAGAACGTATCGGTAGCCGTGGTT
GCTGCCGTGCTGGGCGTTTCTATGGCTGGAGCTCTCGCGTTCGCCTACAC
CCGCCCGGCGGACAACAAGTGGTGAGTCTGTGGTCTCCGAGCGAGGCTGG
TGCTTTGCTGCCGTGTCGGCGTGGTGCATTGGTAGACCGAGTGGCTAAAC
GTCAGTGTCGATGTGGCTCCGATTACAGCATGAGAGGCGGGTGTTGATTT
TGGCGGGGCCTTTGGACTGCTGTTCGCGCTTTTTTTTGCTGCCTGGGGTC
CCGGCCGGCACGGCACGTGCGGCTGTGCTCTGTGTGCTCTCACCATACGG
GCATGCAAAGTCAGAAGGGTGACCGGGTGCGTTATGCTGGGGATCATCCA
TGCAGTCGGTTAACGGCTTGAGCTGAAGCTCATCGTCCATCCAAATCTGC
CGCCGGACAGCCATATCAACCAGCCGAGTCTTGCCCTCCAAGAAAAAGCG
GGCGATTTGCTGTATAGAAGTAGTAGAATGCATGAGACACGGCAGGAAGG
CCAGTATACGCGGGTGTAGTCGTGCCTGTTGTGCGGACAGTCGCACGCTG
CACTAACAGACGCGGTGCTAACCCATCGCCGGACCTCGTTCAGCACAGGC
GCAGATAGACGCGAGACCAAATGCCGGGCACACCAAAAAGCTGACGGTTC
GGTGTGTGTTTTTGCAATGTTTACAGGGGAATGTTTCACTAACGTTTAGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCGTCCCATTTT
TTTGGCGACAGTCCTTTCAGATCAAGGCGAGACGTGTACTACAAGTTGCG
GTGTATTTGAGTACTACACTTGTTCAGTGTATTTTTCTGTACAACTGGAA
CCAACCGGGGTCACACAGGAGGGGGTAAACACTGGGGCTTTTTTCTTCTT
TTTCTGTTTCTTTTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTGGAT
TTTATCGCGAGAAGGGTGCAGCCATCCCTTTCCCTCGTCAACGTGCCAAG
TCGAAGTTTGGTACTCACGAGCTTGTTCAGCTATGTTATCGCTTTCACCT
GCAAAGTCGCAAAATAATCACCTTTGCTTGGAGTTGAACTCCAGACTTTG
CTGCTAGTGGGTTCGAGGTTAAACCACTCGTCCACCGGGGCGACCGGCTT
TGAGTAGAGTAAAGTATACACAACCCAGTATACACTACCTCAAGCTGAGT
AGTACGGAGACCTGCGCACTAAACCTACTTTTGTGAAAGTAGAGTTTGGA
GAGCTCTACTAAATAAACCCTGAGATGAGATGAGCTTTTTTTGTTTGTTT
GTTTCTCACATTAGCTCTCTATTCCAAAACACCCATGGGAGCCCGTGGTA
GCAAAGCTGGGCACACTCGATGCCGCCGCAAAGAAACTAAGCAAAAATAT
GGTACATACGCGCCCTACGATGATTCTAAACTGGGCCCCGAGGGGTCTCG
CGTCTCGCTGGCGCTAAGTCAAAACAAATAGGGTACATGCCACTCGGGAG
AGAAATAAAAGGTGTTGGAAAACACCAGAAAAACCAGGTACCACGCTAGT
GGAGGAGATATGACTAAGACAAGCCGAAGGCTTCCCACACCCGCCTACAA
TGCCAGAGGGTTCCGTGTCGGCTTCTCGCCGACCAGGCATCCCCCACTCC
GCACCACATTCATTCCTGGAATCAATTCCAGGAATGCGGGGTGTGGGAGA
CAAAACAAAAACATCAAAAATATAAAAATATAAAAATAAAGCCACACGAG
GCCACACGGAGGCGGGGTACAAGAGGCCGGGAAAACAAGAAAGGCAGACT
GGCAGTCAGGCCGGGCAGTACGGGGATAAAAGGCCACAAGGTACAGCAGT
AGGAAAGACAAAAGCCAAAAAGCCAAAAAGCCAAACGGCAGAAAGCAGAG
AGCAAAAGGCAAAGAGCAAAAAGCAAAAAGCAGAGAGCAAAAAGCAAAAA
AGCAGAAAGCAAAAAGCAAAGGGCAAGAGGGAAGGGAAAGGGAGAGGCAG
AGAGGCGCAAGAAGCAATAGGCAAGAAGTAAGAAGTAAGAAGCAAGAAGC
AAGAGGAAGCAGAGGCACGAGGGGGGGGGGGAACAAAAATACACAGAATA
CACAGGATTAGGGTCATCAATCAGTCAGTCGGGAACGTACTGCGCCACTA
GCGCGGCCTCTGCCGCCCTGGCCACTTCCACAGCGGTTTCCGGTGCCTTC
TTTTTCAGTCCCCCCTGCGCCCCCCCGGTTCTCTTTCTCTTCGGCCCCGT
AGGGGCCGGCCCCGTAGGGGCCGCGCTCCCAGCCTCCGTTACCGCCGTCG
ACGCCGCCACCGCCGCCCTCGCGAGCTGGCGCTTCGCGGATCCATCTTTC
TCCCGTGCGTGCCACTGCCTCATGAACCATGCCACCCCGTCCTCGATCTT
GCCGAACCACTGCTCCTGTTTCAAGGTGCTCTTCTTCCACTTCTCCCCCG
CCTTCTCGCCCTCCATGCCGAACGCCACGAGGTCATCCCCGAGGTGGGAC
ACCCAATCGCTTTCTTGGCCTCCCCGGTACCCCTTGCCCGTTGCCAGCGT
CCCAAGCAGAACGCGCTTCGGGAGGCGGTCGTCCTCCATGCGCATGACAA
AGCCCGCGAAGCACAGCCCCCGCTTGCGTACGGTGGCTTGGATGGTTTAC
TCGCAGCCGGTTTGGAGAAGGGTCTCAGCGTAGGACAGAGGACCGTCCGT
ACGCTTCCACTTGCTCCAGCTCCAGCCGATGCATCGCGTGAGGAACTGGC
GGTGTGCCCCGTTGAGTTTGGTGTAGTGGTCCGCTGTCAGGCTCCACCAG
GCGCACCCGTACAGGAGCGTTTCCACTACTTCAGCCTGGAGTAGTTGCAC
CTTCAACCGGGGGTTGACGCGCCGCCTGTGGTACATCGCTTCGCTATGTC
GGCGTAAGCACTTCCATGCTCGGCAGACACGGGTCGCGATCTCCTTGTCC
ACCTTCCCGTCCGCGGTGATGGTCCGTCCCAGGTAGACGAACCGGCTAGT
CTGCTTGTACGTCTGGCCACCAGCGCTGACCGTGAACAGGCACTCCTCCA
TCCCTTTCGGCAGCATGCACATGATCTCCGTCTTCGGCCGGCTCCGACAC
CATCAGGCCGAACAGGCCTGCCACGCGCACAATGACCGACATATTCTTTT
CGAGGCTCTCTGGCGTGCGCGATACGATGCCCGCGTCGTCGGCGTAGAGC
ATGCCCCACAGGGCCTCCGCGTCCAGCACCACCGTGTTCGTCTTCCCCCC
CTTTCCCGTCTTGTTGCGCGCAGCTACTGCCTTCCCGATCATAACCATAA
CCATGTCCTCCATCACCGTCGTGTCCCGAGCGAACTCGACCACGCAGACC
ATGAGCATCGCGGCGAAGAACAAGTTGAACAGCAGTGGGGCCAGGTTGCA
CGCCTGCCGGAGGTCTTGGCACACGTTGAACCAGCCCGAGAGGCGTCCGT
CGTCCATTCGCACACGCGCCCTCATGCCGTCGTGGAAGTTGCGGATGACC
GCCAGCATCTCGGGGGGCACGCCGAAGCGTCCGAGCACGTCTCACAGCAG
TTCCCGGTCCACCGAGTCGTAGGCCTTGGTGAGGCTGACGAAGCACGCGA
AGACCGCGGTGCCCGTCTTCCTCGCCAGTTCGTGCAGCCGTTGGACCGCA
AACAGCATATCGAGCGTCGAGCAGCACGGGCGGAAGCCGCCCTGTTCCTC
CGGAATAATACCCTCTCGCTCGCAGTAGTGGCTAAGACGTGTAGCGACGA
TCTTGAGTAGCACTTTGCCGGCGTGTGCCACGAGGGAAATGCCTCGGTAG
TTCCCGCACTCCAGCGCATCCCCCCTCTTGAACAGGACCTTGATAGTTGC
GTCCTCCCACTGCTGAGGCACTTCCCCCGTCTGCCACACGGCCACGATGA
TCGCGTGGAGGTCTCGGAGGAGACCCTGGTCTCCGTCCAGGAACTGATCA
CCTCGGCAGGGAGGTCGGCCGGCCCGACAGCCTTCCTTTCCTGTTGGACA
TTCCTCCTATCGCTTTCTCGACCTCGCTCAGGAACGGCACGTCGTCGAGC
GGCACGCACGTGGGCCACTGGTTGACCTTGTCAGCCATTCGCGGGCCGAG
GGTGGGCGACTTGGTGCGGAAGAGCCGGCCGAAATGCTCTTCCCACCGTC
CGCTGATTAGGCCGGTCCCGCAACAGCTTGCCGTCCTTGTCTTTGATGTT
CTGCGATGTGACGGGCCTCCTAGCCTCGACGGCAATCCCCTTCATGTGCT
TGTAGAAACCCGCCTGGTCCCTCTCGCGCCTCATCTTGTAGAGCTGCCGT
ACGTAGCCCTCGAAGAATGCCTCCAAAGCCCTCGCTCTCACCCGGTCGCG
CCTGTGTAGCGCCTTCGAGACGCGCCGCTTGAGTTCCCTGTTCCCTGGGT
CCCCGCGCAGCTGCTGCCGGGTCACGTCGACTTCCTTCGACACCTCCGTG
ATCTCGAGCTGTGCTGCGGGGGAGCACCAGCCTCGCTGTCCTCGCACACA
CCGCGCCTGGGGCGCGGTCTCCGCCGCAGCCGAAAGCACAGCGGCCGTCA
GCTCGGCGGCGCTCTCTCCCGTTGCCCGCCCGGCAACCTTAAGAGCGAGG
CGAAATAACGTCCTGTCTTGGAAGGAGGTCCGCAGGTCGTCGTCTGCCAC
CAGCTGTTGGAGGTCGATGCGGGGGCCCGCGTGCTGTCGCTGCTGCCCCT
ATTGCGCCGGTTGGGGGCAACTCGGGTGGGAAACCGGACAGTCGCGTGCA
CGACGTTGTGGTGGGATTCTTTGGGGTCGACCCGCTTGACGGAGACATTA
CGCACGGAACGCCGGTCCGCCTGGCGCATGAAGATGCAAGTCGAGGCGGT
GTCGCTGCTTCTCCCGGTTGGAGCTCTGGAAAGTGTGCTTTGCTCCGCCC
TTCGGCGTCCGGAAGTAGGTGTTGACCAGGCAGAGCTGGTTGTCTGCTGC
CAGGCCGAGGAGTCGTTCCCCGTTCTCGTTCAGCTTGTCACGCCCATAAA
AGCCCAACACGTTGGTGTCACGGCACCCGCCCTCCCTCTTGCCAGTACGT
GCGTTTGCATCCATCATAACCACCACATGGTCACGGCTGGGGACCTCTTA
GATCGCTGTTTGAAGCGCATTCCAGAACGGGTCCTTGCGGCTGGTGTCGT
TGCGGACACCTTCCCCTCGGGCAGTTTCCGTGGGTGCGTACCCGACCACG
GAAGTAACTCCGCAAGTGCGGCCCATTTGTAACCGCACCTTCATCAGCCT
CGGGCTAATGCACCCCACCGTCCTGTTTTCCTCCTCCACTCCGTCCCACA
GCACCTTCTTGATCGCCAGGCCCACCCCGTGTACCCCTTCTTGTCCTTGG
TCCCGGCGCGGGCACCGCTCCACGTGATCACGTACTCTCCCTATTCGATG
CACCCCGTTCCCTCGCGCCGGGTCTCCTGGAGTTTTGATTACGTCACAGC
CAGTCTCAGAGCAGATCTGCATGACTGTCATCGCGTTGCGACCAATGGGT
CGCCTGCCCTTGTAGGCAAGCGTGCGTACGTTGAGCGTGCCGAGCGATAG
GTCGCCCTTGCGTGCCTTCGCCTTCGCGGCTGCCTTCGCGGTCGCCAAGG
CCGCCTGTCTCTGTTCGCTGCGCCTTGCGTAGTGGTCGGTTCTTCTTTCG
GACCTTCCGAGCGGCGAGTTTCTTTCTTTCAACCCACCTCAGCCTAGCTC
GGTTCGCGCCTCTGATGTTTGTTCGAGCAGGGTTCAGCACTCCCAACCCG
CGTCCGTGGCTCTCTCCCCCCCTCCGCGGACGTTTGTGCTTACTAACGTG
GTGCTCGCGAGTCTCTCTACTCCTCAGACTACCGCCTCCACGGTTTCCGC
GACGACGGCTTGTGTGTCTCAAACGCAGCCTCCCGCCGGTGATTTATGCC
GCGGGACCTTTCGGCTGCGTAACTCGTCTCTGCCATGGAATGCCCAGCCT
CGCCAGCGTGCCGAGTCATCGGCATGCCAGCGAGGCTGCGCGTGTGCACC
CTACCCTCCTACTCTAGTGTGACCTAGTTTGTCCGCGGGGGACCCACTAG
CTCGAGCCGAGGGAGGGTACTCTGTGTATACCCAACCCAATACTCTACTC
AGCTGAGTAGAGTATGGGGACCTGTACTAAACCTACTGTTAGGAAGAGTA
GGGTATCGAGAGCTCTACTCAACTTACTATTGGGAGAGTAGAGTGTCGAG
GCCTTTACTAAACCTACTTTAGTAAAACTACTCAGTAGGTTCAGGGGACG
GCATACTAAAACCAGTAGGCCTTTCCGGAGCAAATATCATACCCCCCGGC
TGAACTTCACAGAACCTCACTTGAAATTAGTGTAGGGTTTCCAAACAACG
GACGCTTTTGCAGCCTTGTCAGAGGTATTCCGAGATATCCCAGAGGTGTT
CCCGAGATTTCCAGCTCTTTTTTGTGAAAAAAGCTGTGTATTTGGCTTCA
TTTTTCAACCACCCTTTGCGCGAAAAAACTTGGATGTAAGCGTGTCGTTT
TCGGCTGACAAAGTCCTGGAGTATTTGATATGCTCCTGTCACAACCGGGC
AACATTCGCGTCAAGTCCGTTTTTTGGTTGGGGTAGAAACCACGGTGTGA
GGCTCCGGGGCGTTGATCCAAATATTCACCCCCCGCTTCGTACCAAAAAA
GAGCCGTCGAAAAAATCGTTCGTGCTCACGAAAATCTCTCAAGCGTGGTT
TCTAGCTATCTGCTGCTGCTGTCGACGACATGCGACGGCTCCTAAACACC
ATATCAGTAGGCCCTGCTAGCGGCTTGCGCCTGTTCGTGCTCGTGAGAGC
CTCGCTCGATGACTTCGTGAACACCAAGTGCTCGCTCAGATGCCCGTTTG
ACAGTCTTTTCAAAAGGGCGAGTTTTGCACGGTTTTAAAGCAAAAGCTCC
GCTTTCCCGCACCTAAAAAGACCCTGCACGACGCTTCCTTTCTGCAGAGA
AGTGCAAACTGTTGCACATGAAATGCTCGAGGGTGTATACAGCAGCACTC
TAAGGGTCGAACTGGAAAAGTGTGTTTGAGGAGCTTTCTGGACGGCCCGT
GTGGTCATTTTCACATACCCGAAGAAAATAGACGCACAAATATCAATCGC
TCGTGTGTTTCAATGAGCCCCAAGAACCACTACATCTGCGAGCCCCTCCC
CTTGCCGATGCCTTCAGTATCTCCAGACACGCCATACGGCAATGTCCACG
TCTTCAGCAACAACGGTCGCTAAAGTCTCAAGTCCATACCCATCCTACAC
CTACCCAAAGAACCTACACGCTTCCTTTCTGCAGACAAGTGCAAACTGTT
GCATACCCCGCAGTATAAAATCCTCGAAGGTATATACACAGGGCCGGTCG
CCCCGGTGGACTAGTGGTTTAACCTCGAACCCACTAGCAGCAAAGTCTGG
AGTTCAATTCCAAGCAAAAGTGATTATTTTGCGACTTTGCAGGTGAAAGC
GATAACATAGCTGAAAAAGCTCGTGAGTACCAAACTTCGACGTAGCACGT
TGACGAGGGAAAGGGATGGCTGCACCCTTCTCGCGATAAAATCCAAGGCA
AGCACCGCAGGAGGAAGGTGGGGCAAAAAAGAAACAGAAAAAGAAGAAAA
AAGCCCCAGTGTTTACCCCCTCCTGTGTGACCCCGGTTGGTTCTAGTTGT
ACAAAAAAATACACTGAACAAGTGTAGTACTCTAAATACACCGCAACTTG
TAGTACACGTCTCGCCTTGATCGGAAAGGGACTGTCGCCAAAATAAATGG
GACGAAAACACACACACACATATACAGCAGCACGCTAAGGGTCGAACTGG
AAAGTGTGTTTGAGGAGCTTTCTGGAGGGCCCGTATGGTCATTTTCACGT
ACCCAAAGAAAATAGACACACAAAAAAACAATCGTTTGTGTGTTTCACTG
AGCCCCAAGAACCACTACATCTGCGAACCCCCCCCCTTGCCGACGCCTTA
AACAGGTTCCTCTGTTTGCACGTCTCACGCCATCACCACCGAACAACCAA
CTGCAGTCGTCCACGCTCACCGCACTTCGTTGCCGATCAAGCCTCATGCC
AGCCTTTAGTCATGATGCGTCAAATAATTCCACCGCTCCGCCGGTCGGCC
AGTGCACGCCTCACCTCCTTGACACGCGGTGCCCCCTAATCCAAACCAAA
CCAGTACCAGCTTTTACAGACAGTAGAGGCGTGCGCGTGCCGCGTTCGGC
GCTCTTCCTTGGCCGACGCACTTCATTGGTTTGTGCTTACCCCAGCACAA
ACCAATGCGGGGAATCAACAACCAAGGCCACCCTTGAAAACACTCCGTGT
GTCGCTCCCAACCCTCAGGCAGCCTCTGCGGATACATTTCACACGACTCA
TGTGTTTGATGAACGTCAACCGCATCTTGGGCCCAATCCTCATTACCCTT
GGCAACAAGAACCTACCTTTTCTTGCACTGATACATCTACCCCCAGCTTC
CCCGCCCCCTTCCATTTTCACATCCCCAGAACTCGCTTCCAAACTTACAC
CGCCGACCGCATTGCTTTCTTCATGTGCCCACTACACGACACGACAAACA
GGAGGCAGCGAATCTTTGGGCGAGGGGTCACCACCCTGGGTAGCTCCTTG
GACCCCGCGGAGGAGGCCGGCATGCGAGCACGGGCTAACGACCGCGCGCT
CAAGAACCTGGGAGTGCGGGAACTGAACCTCGGGAGCCTACCCGAGGGTG
CCAAGATCGTCAACCTGCCCAACCAGGTGCGGCCACGTTTGTTAGGCTGG
GCCCGGAAGCTGCCAGCCGTTGTGTATTTAGTCGACTGCGCTGCTGCGTG
AATCCGCTGTTGAATAGGAGTACTTTTTTGGCGGGCGCTAGTTGGGTTTG
TTAGCCAACGTTGGCATCGACGTATCCTTTCGTTGACCGACCGATCTCGC
CCCAGCCAACCCTGCAACTGTCCTCGTTTTCCTGGAAGAATCCTTTGTTT
CGTCGTTCTTTCCCTCGGGCACGCTTACGCCCCGGAGCTGCCACACCCAG
AAGGAGCATAGCTTCCTTCGCGCTATGCGACTCATGCGTCGAGGTTATCG
TAATTGGTATGGATGCACGCAGGTTGGAGGGCACAAGATGATGAAATCGG
TCCCGGCGCTGCTGCTCCTGGAGTGGGAGGGCAAGGGCGCCGGCGGCAAG
CCCGCCCGGTTCGTGCTCAAGATCTTGCACGACGGCGGTAGGGGCCTGGT
GGAGCTCGGCTTCTACGAGAACCTGGCGAGCCATGCCGAGGGGCCGGGTG
CCCAGGGCAAGGTACTTGTGCGTGTTAGATGGAAGGAGGTTTCGCGTCGG
CTTCCTCACGTGGCCCGCTGTGCGTGAAAAGGGTGGATCGGTGTGCGCCG
TCGCCCTTGAACATATGTTGCTGCAAGGCATGATGGAGAGGTACATCCAT
CGCCTCGAACTCCCCGCTAGGATGATTGATGCATACCCCATTTACTTCCT
CTGTGCTTGTCAATTTCCCGCTCTGCTGACCGAAACCTAGTTCTCCGAAA
CACAAAATAGACACGGACCGCAATAACACCGCCTACGAACAACACGGGTA
ACCACCAACCTTGTCGTCCACCTCCTTCAGTGCACACAAGCCCCAGCAAC
AGCAACAACTCTCAATCACGCCCACCCTCGACCTCTTCTCACGGACTCAT
GGTGTCCCGCACGACCGGAGCACTCCGACCAATTTGATCTCCTGTCGATG
CCACCCCGACTAACGACCGCCTGACGACACCTTTCCGACTCGTTGGTCAC
TTGTTGATGCCACCCCTACAAATGGCCGCCTGAGGACAACATTCCCACCA
ATGACCGCCGTCGATGATTTATGATAGCCTGTCGATGATAGCCTGCCGAT
GACTTTGATCGCCTGTCGATGACTAAACACCGCCGTCGATGCGTCGAACG
CCGCCGCTGCCGCCGCCGAGCAGGAGCCAGAGCGCACGGAGCTGGCGAGC
TTCCTGTGCCCGTACTTCGGGGCGGTGAAGGTCAAGACGGACCGGCACGT
GGAGGAGGACGGCGAGGTGATCGAGCCCACGTGCATACGCTTCCTGGTGC
TGCAGGACCTGTGCAACGGGCTCGACAATCCCTGCGCCCTGGATGTGAAG
ATGGGGAGGGTCACGGTGGAGCCCGGAGAACGGGAGGTCAGTTGCAACCG
CAACCGCAGCCGCAGCCGCAGCGCTAGCAGCGCTAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCGAAAACAACAGCAGTTTTGGTAAAAGCTGG
CAAACCTGTGAGGGAGAAGAGGGGCTTTCGCAGAGAGGCCAGGGAGGCGA
AGGATGTGTCGTGTTGATGCGCTCTGTTGTGCGCAGCTGCTGCGCGATTG
GAATGAAACAAACTGCACTAAACCAAACCAAACCAAACCAAACCAGGAGA
AGAAGATCGGGCAGCTGAAGAAGTACCCCAATCAGCCGGTCGTGGGCTTC
CGCTATGTGGGCATGAGCTGGTCGAGCTACTTCGAGGGGGACCAGCAGCC
GCAGAAGCTCTCGATGCAGAAGAGCTGGGGCGCGGGAATGTCGTTGGAAA
ACACCGGGAGTGGGCTGGCCCGGTGAGTGGTGATTCTTTTACTGTTACGC
CTGCTTGTCAGGAAGCCGTGATGTACGTACTGTAGTACGCTACGGCCCGA
CAACGCGAGCAAACATTGATAACCCCAGAATTATGTACCAACGGGCGCCA
GCTATTGTAGCTGGGGGCAGCGAGGGACAGGTGGCGCGTGCACAGCGGTT
GGCGTGGAGGGACGTGTTTCACAGGTCGGACGCATGCTGCTGACATTTGG
CAACAAAGAAAGAAAGAAAGAAGTTGACCCAAAATCCGCCGGGACTGGAC
TACAAACAGGTTCTTCCACGACGGCACGCGGCTGCGCCGGGGGCGCGTCA
AGTTCGCGCTCCGCAAGGTCCGCGCGCTGGCGGACTTCTTCTCCCGGCAA
AAAATCTTCAAGTTCTACGCCAGCTCCCTCCTGCTCACGTACGACTCGGC
GGACCCGGCGCCCCCGGGGCTCGAGGAGGAGGAGGAGGTGGCGGTGTGCA
TGATCGACTTCGCGCACGCCGTCCCGGTGGATGGCGACGGCGAGCTGGGC
GAGGGCCCTGCGCAGGCTCCGGGGGACAAGGGGTACCTGTACGGGGCGAA
AAACGTGCGTGTTGTTGTATCGGTGTGGTTGTTGTTTGAGTGTGTGTTGT
CTTTCAAGTACGTGTGGGCGTGACTTGTCGCTGTCGTTTGTGAGCGCTCG
CTTGTGTTTCCACGGAAGCGCATCTTGTATTCGTCAACAGCTTACGGTGG
ATCTTGACGGGCTCCTTATTGGTGGTCGAGGGAGTTCGTCCTTGCTCTCT
AATTTACCTGGTCTCTCTCCCGCGGTTTGTCGCTCACACTTGTGTGTCTC
CTTTGCGTGTTGTCGTGCATGCTGATGGATGCAGCTTATTGGCATCATGG
AGGAGCTGCTGGAAGTGACAGCGGCAGCACCGGACGCACCGCTCGACGTC
GACGCGCTCTCCGCGAAGCTCGAGTTCATGACAAACGTCAAGAACAACTA
CGTTGATGACGCCTAAACCCAAGCGAAAGGGAACGGGGCGAGGACAGGAG
TGGAATCCAACTCGTCCATCCGTGACATCTCGCTCTAGGTGCGTGTTTCT
TGTCGACGACGGAAGTTGTCGAGGCGGCGCCTACGCCTTTTGAATGGTGC
ATAAGTTACCTTATGGAGAAACTATCGTCAGAGCCGAGACAGGACTACTG
GGGGTATGATTGCAGAGGATGTTTCTCATTTGCCTGCCAGGATGTAGGCT
TCCTTGCAATATTTTTGCTATTGTCTTTGTTTTTAGGTGTCCTTGTCACA
CGATCTTGAGTAGCCAATGCGATATGCTTCGTTCACCAACAGCTCGCTTC
TTATAATGAGCTTGTGTTTGTCGTTCTCTGTACGATTGTCTCGGGGATGA
TTGAAGCAAGAAGGCCGGCGTTGTGTTTGATGCCTCGGGAAAGTTGAGTT
TATGTAGAGGTTTCCCTTTGTCTTCTATACATAAGGGTGGGGAACGCAGC
GTTCCGTGTTCGTTCACCTCGATTCGTAAATATGGAAAGGCGGGCACGCA
CGGGAGAGATCGCAAGGACTGAATTGTACCGTTAGAGCTTAGACCTTCAC
GCCAACTTGTGGTGGCGGCTGCTGGCCGCGGCCCGTCCTGTAACGAAGTC
TGATCGGGTGTTCTCTGCGCCAACAGGCAGTTGAAGTAGGTTGGGGTGTA
GCGTTTTCGGGGGTTACTGGTGTGTTATCGTTGAAGGCCTCAACATCGTC
CGACGTTTTTCCAGTTGCCTTGTGTGCAGGATTGTACAGCCACTCATATG
ATACTTTTTTGAGCTGGTGGGCTGTTGATCATGACGCCCTCTTGTTTTGC
ACCTGGTAGTTCTACCTGTAGCGCCAGTCGCGGTACAGCAGTTTTTGGGG
CTCAATTGTGTTTTTACGCGCGTAGAGACATGACATGTCGCCATGATGTG
TGCTTTGGGTTTATTTTACGTTAGGAATATGTGTAGCAAATATCGACGTG
ACTGACGGGACGAGGCATGTGGCGTCATGCCGAACAAGTTTACTCACACT
AACACCAGTAACACCCTCCCCCGTCCTATGAAGAGGGTCGAGGGGGCGGT
TCTGGTTTAAACATCACGATCATTTGCACATCGAGGAAAACCCTAGAGTG
GCTCAGACTAAGGGTTTCGGGACATGACCATAATAGTGAGTTTCACTTGT
CGTGTGCGGTGGTGCCATCTGGCGAACAGCTCCGGCATGCGCGAGGTGTG
CTGCTATCCGACAACCACCTGCCATTCGCGTTTCAACGCCTCTCCAACCC
CTGGTTGTGTCGAGAGAAAACAAAAGGAAGGGGCTGGCATGCAAGACACT
TCTCCAAACCTCCTTGAACCTTGAATCAGTTAGAACGGCGTTTTTTTCGT
GTTTAGACTGTGCGTTTTATTCTGCTGGATCTCAGGTGTGTTGTGAACCA
AGACTACGTTCAGGACGGGAACCACGCTGACACTCGTTGCAGGTACTACA
ACGACACACCATCGCGGAGCATCAACACAGCTAAATGTATCAAAGGATTG
ATGCTAAAGAGTTGGCAAGGGCAGAGCTCGTATTGGACCACTGGTCCGAC
TCAGGGCAAAATGATGAACCTTCGTTCAGCAAAAGATGCGGAGATACGAC
TGGGATGCGGGTTGGAGCCGAAAACAGTTTCCACGTTTCCTTGAACCATA
GAGTAAGTGCTTAAGGACAAAGGGGT back to topCoding sequence (CDS) from alignment at C-linearis_contig11:483919..497444- >mRNA_C-linearis_contig11.1171.1 ID=mRNA_C-linearis_contig11.1171.1|Name=mRNA_C-linearis_contig11.1171.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2754bp|location=Sequence derived from alignment at C-linearis_contig11:483919..497444- (Chordaria linearis ClinC8C monoicous)
ATGAAGTCTTCAATCGATGTCAGTAGCCGAGTTTTGTCGTCCCCCTGCGG
ACATGGAGATGAAGCGGCAATCCTGGCGCTGTCGGGAGGCGCGGGGCGCG
ACAAGAACGTATCGGTAGCCGTGGTTGCTGCCGTGCTGGGCGTTTCTATG
GCTGGAGCTCTCGCGTTCGCCTACACCCGCCCGGCGGACAACAAGTGATG
AAGTCTTCAATCGATGTCAGTAGCCGAGTTTTGTCGTCCCCCTGCGGACA
TGGAGATGAAGCGGCAATCCTGGCGCTGTCGGGAGGCGCGGGGCGCGACA
AGAACGTATCGGTAGCCGTGGTTGCTGCCGTGCTGGGCGTTTCTATGGCT
GGAGCTCTCGCGTTCGCCTACACCCGCCCGGCGGACAACAAGTGGAGGCA
GCGAATCTTTGGGCGAGGGGTCACCACCCTGGGTAGCTCCTTGGACCCCG
CGGAGGAGGCCGGCATGCGAGCACGGGCTAACGACCGCGCGCTCAAGAAC
CTGGGAGTGCGGGAACTGAACCTCGGGAGCCTACCCGAGGGTGCCAAGAT
CGTCAACCTGCCCAACCAGGAGGCAGCGAATCTTTGGGCGAGGGGTCACC
ACCCTGGGTAGCTCCTTGGACCCCGCGGAGGAGGCCGGCATGCGAGCACG
GGCTAACGACCGCGCGCTCAAGAACCTGGGAGTGCGGGAACTGAACCTCG
GGAGCCTACCCGAGGGTGCCAAGATCGTCAACCTGCCCAACCAGGTTGGA
GGGCACAAGATGATGAAATCGGTCCCGGCGCTGCTGCTCCTGGAGTGGGA
GGGCAAGGGCGCCGGCGGCAAGCCCGCCCGGTTCGTGCTCAAGATCTTGC
ACGACGGCGGTAGGGGCCTGGTGGAGCTCGGCTTCTACGAGAACCTGGCG
AGCCATGCCGAGGGGCCGGGTGCCCAGGGCAAGGTTGGAGGGCACAAGAT
GATGAAATCGGTCCCGGCGCTGCTGCTCCTGGAGTGGGAGGGCAAGGGCG
CCGGCGGCAAGCCCGCCCGGTTCGTGCTCAAGATCTTGCACGACGGCGGT
AGGGGCCTGGTGGAGCTCGGCTTCTACGAGAACCTGGCGAGCCATGCCGA
GGGGCCGGGTGCCCAGGGCAAGGAGCCAGAGCGCACGGAGCTGGCGAGCT
TCCTGTGCCCGTACTTCGGGGCGGTGAAGGTCAAGACGGACCGGCACGTG
GAGGAGGACGGCGAGGTGATCGAGCCCACGTGCATACGCTTCCTGGTGCT
GCAGGACCTGTGCAACGGGCTCGACAATCCCTGCGCCCTGGATGTGAAGA
TGGGGAGGGTCACGGTGGAGCCCGGAGAACGGGAGGAGCCAGAGCGCACG
GAGCTGGCGAGCTTCCTGTGCCCGTACTTCGGGGCGGTGAAGGTCAAGAC
GGACCGGCACGTGGAGGAGGACGGCGAGGTGATCGAGCCCACGTGCATAC
GCTTCCTGGTGCTGCAGGACCTGTGCAACGGGCTCGACAATCCCTGCGCC
CTGGATGTGAAGATGGGGAGGGTCACGGTGGAGCCCGGAGAACGGGAGGA
GAAGAAGATCGGGCAGCTGAAGAAGTACCCCAATCAGCCGGTCGTGGGCT
TCCGCTATGTGGGCATGAGCTGGTCGAGCTACTTCGAGGGGGACCAGCAG
CCGCAGAAGCTCTCGATGCAGAAGAGCTGGGGCGCGGGAATGTCGTTGGA
AAACACCGGGAGTGGGCTGGCCCGGAGAAGAAGATCGGGCAGCTGAAGAA
GTACCCCAATCAGCCGGTCGTGGGCTTCCGCTATGTGGGCATGAGCTGGT
CGAGCTACTTCGAGGGGGACCAGCAGCCGCAGAAGCTCTCGATGCAGAAG
AGCTGGGGCGCGGGAATGTCGTTGGAAAACACCGGGAGTGGGCTGGCCCG
GTTCTTCCACGACGGCACGCGGCTGCGCCGGGGGCGCGTCAAGTTCGCGC
TCCGCAAGGTCCGCGCGCTGGCGGACTTCTTCTCCCGGCAAAAAATCTTC
AAGTTCTACGCCAGCTCCCTCCTGCTCACGTACGACTCGGCGGACCCGGC
GCCCCCGGGGCTCGAGGAGGAGGAGGAGGTGGCGGTGTGCATGATCGACT
TCGCGCACGCCGTCCCGGTGGATGGCGACGGCGAGCTGGGCGAGGGCCCT
GCGCAGGCTCCGGGGGACAAGGGGTACCTGTACGGGGCGAAAAACGTTCT
TCCACGACGGCACGCGGCTGCGCCGGGGGCGCGTCAAGTTCGCGCTCCGC
AAGGTCCGCGCGCTGGCGGACTTCTTCTCCCGGCAAAAAATCTTCAAGTT
CTACGCCAGCTCCCTCCTGCTCACGTACGACTCGGCGGACCCGGCGCCCC
CGGGGCTCGAGGAGGAGGAGGAGGTGGCGGTGTGCATGATCGACTTCGCG
CACGCCGTCCCGGTGGATGGCGACGGCGAGCTGGGCGAGGGCCCTGCGCA
GGCTCCGGGGGACAAGGGGTACCTGTACGGGGCGAAAAACCTTATTGGCA
TCATGGAGGAGCTGCTGGAAGTGACAGCGGCAGCACCGGACGCACCGCTC
GACGTCGACGCGCTCTCCGCGAAGCTCGAGTTCATGACAAACGTCAAGAA
CAACTACGTTGATGACGCCTAACTTATTGGCATCATGGAGGAGCTGCTGG
AAGTGACAGCGGCAGCACCGGACGCACCGCTCGACGTCGACGCGCTCTCC
GCGAAGCTCGAGTTCATGACAAACGTCAAGAACAACTACGTTGATGACGC
CTAA back to top
|