mRNA_C-linearis_contig109.1131.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig109.1131.1
Unique NamemRNA_C-linearis_contig109.1131.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: D8LKV4_ECTSI (Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV4_ECTSI)

HSP 1 Score: 681 bits (1756), Expect = 2.750e-245
Identity = 339/396 (85.61%), Postives = 368/396 (92.93%), Query Frame = 1 
Query:    1 PVHRLDTGEEGVVLRERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQGLYTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDG---DYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQDEEVIQRSQALERALRAS 1179
            PVHR +   EGVVLRERRNWRIFS FAR EYPECL IIEEQLRACNGLAEY I+ KGQI+RAQG+IQESL LFQAATCLNPQNPSNLK+VGRCLFLLGKHKAALDVY EAQ+IDSEDWEVWH+RGLCYMHLKQFERALEAF+Q+NSISRHDST+LH+GKV+RLQ K AEALTVYEEALEFSPESPELLTTVGLLHLQQG+NQKAFE LGNALTHDPR+PKAILAAGSIIQDNQDMDVALVKYRVSAVQ  Y AAVACLKRALY+DPFEWIVAYNLGLVHL+ +QYASAFHHFSAAINLK DFAASYMYLAITLARLEDFDNACSAYDKAL++DG   DYLTHLNYAVTLLNNDEPE+A EH+A+F+++FEALDPD E+D+EV+ RSQAL  +L AS
Sbjct:   16 PVHRPEA-IEGVVLRERRNWRIFSAFARQEYPECLQIIEEQLRACNGLAEYAIHVKGQIVRAQGQIQESLVLFQAATCLNPQNPSNLKEVGRCLFLLGKHKAALDVYGEAQQIDSEDWEVWHSRGLCYMHLKQFERALEAFDQANSISRHDSTFLHMGKVYRLQDKPAEALTVYEEALEFSPESPELLTTVGLLHLQQGENQKAFECLGNALTHDPRNPKAILAAGSIIQDNQDMDVALVKYRVSAVQCKYIAAVACLKRALYLDPFEWIVAYNLGLVHLSTSQYASAFHHFSAAINLKPDFAASYMYLAITLARLEDFDNACSAYDKALELDGGGGDYLTHLNYAVTLLNNDEPERAAEHYASFKKIFEALDPDTERDQEVLARSQALANSLGAS 410
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A8J6CHX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHX9_DIALT)

HSP 1 Score: 496 bits (1276), Expect = 3.140e-172
Identity = 245/397 (61.71%), Postives = 307/397 (77.33%), Query Frame = 1 
Query:   43 RERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAV------------------QGLYTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQ-DEEVIQRSQALERALRA 1176
            RER NW I   + +  Y  CLA+IEEQL+  NGL EYPIY K  I R +G IQ+SL LFQAATCLNP N +NLKQVGR L+LLGKHKAALDVY EA +++ EDWEVWHN+GLC M+LKQ+E+A++ F+Q+N+I +HD TY+ +GKV+ LQ     A+ VY EAL+FSP++PE+LTTVGLL+L+ G+N +AF+ LGN+LTHDP++PK ILAAGSIIQD+ DMDVALVKYRV+AV                  +  Y AA+ACLKRALY+DPFEWI++YNLGLVHLN  QYASAFH FS++INLK DF +SYMYLAITL+RL+DFDNACSAY+KA++++ D+L  LN+A+TL NNDE EKA EHFA F QL+  LD +A+  D EV ++ QAL   L A
Sbjct:   16 RERVNWLIHVNYVQQNYDHCLALIEEQLKMHNGLCEYPIYIKALIKRQRGEIQDSLQLFQAATCLNPNNINNLKQVGRSLYLLGKHKAALDVYKEAMRLNEEDWEVWHNQGLCQMYLKQYEKAIDCFKQANAIQQHDVTYIQLGKVYTLQEDFRAAIEVYLEALDFSPDNPEMLTTVGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVATPNSAQLWNNIGMCFFGKQRYVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHFFSSSINLKPDFPSSYMYLAITLSRLDDFDNACSAYEKAIEMEDDHLFELNFAITLYNNDEVEKAAEHFAKFEQLYAKLDDEAKSSDPEVAEQRQALAALLPA 412
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A6T9B7X8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9B7X8_9EUKA)

HSP 1 Score: 490 bits (1262), Expect = 2.960e-170
Identity = 243/401 (60.60%), Postives = 306/401 (76.31%), Query Frame = 1 
Query:   25 EEGVVLRERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQ-DEEVIQRSQALERAL 1170
            + GV LRER NW I   + R +Y +CL  IE  L  C GLAEYPIY K  I R +G I ESL LFQAATCLNP N SNLKQVGR L+LLG+HKAA+DVY+EA K+ SEDWE+WHN+GLC M+LKQ+E A+E  +++N I RHD+T++ +GKV+ LQ +   A+ VY EA+EFSPE+PE+LTT+GLL+L+ G+N KAF+ LGN+LTHDP++PK ILAAGSIIQDN DMDVALVKYR++AVQ           G+       + AA+ACLKRALY+DPFEWI++YNLGLVHLN  QYASAFH+FS +INLK DF +SYMYLAITL+RLEDF+NA SAY+KA++++ D+L  LNY V L  N E +KA EHFA F +LF  LD +++  D EVI++  AL+ AL
Sbjct:    1 QPGVTLRERVNWLIHIQYVRQDYNDCLKTIEAHLAQCRGLAEYPIYVKALIKRQRGEINESLQLFQAATCLNPHNVSNLKQVGRSLYLLGRHKAAIDVYEEALKLGSEDWEIWHNKGLCCMYLKQYEAAIECLKRANLIQRHDATFMQLGKVYTLQEQYRNAIDVYLEAIEFSPENPEILTTIGLLYLRLGENLKAFDYLGNSLTHDPKNPKTILAAGSIIQDNSDMDVALVKYRIAAVQTPNSAQLWNNIGMCFFGKQRFVAAIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSTSINLKPDFPSSYMYLAITLSRLEDFENAYSAYEKAIEMEEDHLFELNYTVALYINGEVDKAREHFATFERLFTKLDDESKNADPEVIEQRAALQEAL 401
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A7S3GDF2_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3GDF2_9EUKA)

HSP 1 Score: 486 bits (1250), Expect = 2.430e-168
Identity = 235/393 (59.80%), Postives = 305/393 (77.61%), Query Frame = 1 
Query:   37 VLRERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQ-DEEVIQRSQAL 1158
             LRE++N  I   + R +Y +CL +IEEQL+ C GL EYPIY K  I R +G+I ESL LFQAAT LNP N +NLKQVGR L+LLGKHKAA+DVY+EAQKI  +DWE+WHN+GLC M LK+++ A+E+F  +NSI RHD+TY+ +GKV+ LQ     A+ VY EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGNALTHD ++PK ILAAGSIIQD+ DMDVAL+KYRV+A Q           G+       Y AA+ACLK+ALY+DPFEWI++YNLGLVHLN  QYASAFH+FSA+INLK DF +SYMYLAITL+RL+DF+NACSAY+KA++++ DY+  LNY++TL NN + EKA +HF  F +LF+ LD + +  D +V+++ QAL
Sbjct:   10 TLREKKNALIHRLYIRQDYDDCLKVIEEQLKECKGLCEYPIYVKALIKRQRGQINESLQLFQAATVLNPHNVANLKQVGRSLYLLGKHKAAIDVYEEAQKIGIDDWEIWHNKGLCNMFLKKYKEAIESFRHANSIQRHDATYMQLGKVYTLQENYKAAIEVYLEALEFSPENPEILTTIGLLYLRLGENYRAFDFLGNALTHDAKNPKTILAAGSIIQDHSDMDVALIKYRVAATQTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYLDPFEWIISYNLGLVHLNTGQYASAFHYFSASINLKPDFPSSYMYLAITLSRLDDFENACSAYEKAIEMESDYMFELNYSITLYNNGDVEKAKQHFVEFERLFQELDEETKNADPDVLEQRQAL 402
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A6S9RQ16_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A6S9RQ16_CHRCT)

HSP 1 Score: 484 bits (1245), Expect = 2.530e-167
Identity = 235/389 (60.41%), Postives = 300/389 (77.12%), Query Frame = 1 
Query:   46 ERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQDEEVIQRSQAL 1158
            ER NW I   + R +Y ECL  IE+ L+   G+ EY IY K  I R +G IQESL LFQAATCLNP N SNLKQVGR L+LLG+H+AA+DVYDEA++I  EDWE+ HNRGLC+++LKQ+E A  AF+++NSI RHD+TY+ +GKV+ LQ     A+ VY EALEFSPE+P+LLTT+GLLHL+ G+N KAF+ LGN+LTHDP++PK ILAAGSIIQD+ DMDVALVKYRV+AVQ           G+       Y A++ACLKRALY+DPFEWI++YNLGLVHLN  QYASAFHHFS +INLK+DFA+SYMYLAITL+RL+D +NAC+AY+KA+D++ D++  LNYA+TL NN+E E+A EHFA F ++F  LD +A   +  ++  + L
Sbjct:   17 ERHNWHIHMLYVRQDYDECLKAIEKALKESKGMCEYAIYVKALIKRQRGEIQESLQLFQAATCLNPHNISNLKQVGRSLYLLGRHRAAIDVYDEAERIGIEDWEIKHNRGLCFLYLKQYEEAANAFKKANSIQRHDNTYVQLGKVYTLQEDYRAAIEVYMEALEFSPENPDLLTTLGLLHLRLGENFKAFDYLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRYVASIACLKRALYLDPFEWIISYNLGLVHLNTGQYASAFHHFSTSINLKADFASSYMYLAITLSRLDDLENACAAYEKAIDMEEDHMFELNYAITLANNEELERAKEHFAQFERIFAKLDDEARSADPEVEEMRML 405
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A7S2C5V5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5V5_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 4.180e-164
Identity = 237/412 (57.52%), Postives = 304/412 (73.79%), Query Frame = 1 
Query:   43 RERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSE-----------------DWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ------------------GLYTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDP-DAEQDEEVIQRSQALERAL 1170
            RE++N  I + + RHE+ EC+ +IEEQL  C    EYP+Y K  ILR +G+IQESL LFQ+ATCLNP N +NLKQVG   +LLGKHK A+ VY+EAQ+I  E                 DWE+WHN+GLCY+H+KQ   A+E+F+++NSI RHD+TY+ +GKV++LQ    EAL VY++A++FSPE+PELLTTVGL+ L+  +N KAFE LGN+LTHDPR+ K ILAAGSIIQDNQ+MD AL+KYRV+AVQ                    +TAAV+CLKRALY+DPFEWI+ YNLGLVHLN  QYASAFH+FSA+INLKSDF ASYMYLAITLARL+DF N+C+AY+KA+ ++ D++ HLNYA+TL N+ E +KA  H   F+QL+  L+  D E D EV+ +SQ L+ AL
Sbjct:   11 REKQNAFIHACYVRHEHDECMRVIEEQLSEC-AFCEYPLYVKALILRQRGKIQESLTLFQSATCLNPNNTANLKQVGHSYYLLGKHKQAIQVYEEAQRIGEENVRKRNEVGRQARLSADDWEIWHNKGLCYIHMKQLGLAIESFQRANSIQRHDATYMQLGKVYQLQENFEEALKVYQDAIDFSPENPELLTTVGLVWLRLQENPKAFEQLGNSLTHDPRNAKTILAAGSIIQDNQEMDTALIKYRVAAVQTPNSAQLWNNIGMCFFGKAFHTAAVSCLKRALYLDPFEWIICYNLGLVHLNTGQYASAFHYFSASINLKSDFPASYMYLAITLARLKDFPNSCTAYEKAISMEQDHMNHLNYAITLYNHGEVDKARTHHGIFKQLYAELNQEDVEHDYEVMAQSQGLQEAL 421
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A7S0X8L8_9CHLO (Hypothetical protein n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X8L8_9CHLO)

HSP 1 Score: 476 bits (1226), Expect = 7.180e-164
Identity = 231/398 (58.04%), Postives = 304/398 (76.38%), Query Frame = 1 
Query:   34 VVLRERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAE-QDEEVIQRSQALERAL 1170
             + RERRN++I   + R ++ +CL +IE  L   NG+ EYPIY K  I R QG+IQESL LFQAAT LNP N +NLKQVGR L+LLGKHKAA+DVYDEAQ+I  EDWE+WHN+GLCYM+LK ++++++ F Q+N + RHD+T+  +GKVF LQ    +A+ VY EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGN+LTHDP++PK ILAAGSIIQD+ DMDVAL+KYR++AVQ           G+       Y A++ACLKRALY+DPFEWI++YNLGLVHLN  Q ASAFH FS++INLKSDF +SYMYLAITLA+L+D DNAC+AY+KA+ ++ D+L HLNYAVTLLN+ +  +A +    F +LF ALD + +  D +++ +   L RAL
Sbjct:   64 AIARERRNYQIHLLYVRQDFKDCLVLIETVLAEFNGMCEYPIYVKALIKRQQGQIQESLQLFQAATALNPHNVANLKQVGRSLYLLGKHKAAIDVYDEAQRIGVEDWEIWHNKGLCYMYLKDYDQSVDCFRQANEVQRHDTTFTQMGKVFTLQENYKQAIEVYLEALEFSPENPEVLTTIGLLYLRLGENYRAFDFLGNSLTHDPKNPKTILAAGSIIQDHSDMDVALIKYRIAAVQTPNSAQLWNNIGMCFFGKQRYIASIACLKRALYLDPFEWIISYNLGLVHLNTGQCASAFHFFSSSINLKSDFPSSYMYLAITLAKLDDLDNACAAYEKAIGMESDHLFHLNYAVTLLNSGDETRAAQQLEEFEKLFGALDDETKGSDPDILLQRNLLTRAL 461
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A067C533_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C533_SAPPC)

HSP 1 Score: 470 bits (1210), Expect = 4.520e-162
Identity = 241/393 (61.32%), Postives = 297/393 (75.57%), Query Frame = 1 
Query:   52 RNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDS-EDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQ-DEEVIQRSQALERAL 1170
            +N+ I   + R EY ECL +IEE L+  +GL E+PIY K  IL+  GRIQESL LFQAATCLNP+N  NLKQVGR L+LLGKHKAA++VY+E QK+   EDWEV HN GLCYM+LK F+ A+EAF+ +N++ RHD+T+L +GKV  L+     A+ VY EALEFSPESPELLTT+GLL+L+ G+N +AF+ LGN++THDPR+ K ILAAGSIIQD+ DMDVALVKYRV+AVQ           G+       + AAVA LKRALY+DPFEWI +YNLGLVHLN  QYASAFH+FSAAINLK DF +SYMYLAITL RL+DF+NACSAYDKA++++ D++ HLNYA+TL NNDE E+A   F  F  +FE LD      D EV+ + QAL  AL
Sbjct:   26 KNYLIHKLYLRQEYTECLRLIEEMLKEHHGLCEFPIYVKALILQRNGRIQESLQLFQAATCLNPENKDNLKQVGRSLYLLGKHKAAIEVYEETQKLPGLEDWEVSHNIGLCYMYLKDFDHAIEAFQHANNVHRHDTTFLQLGKVHTLRDDFKAAINVYLEALEFSPESPELLTTIGLLYLRIGENFRAFDYLGNSMTHDPRNAKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVAAVASLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHYFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAYDKAIEMEADHMFHLNYALTLFNNDELERAKVQFNKFEAIFETLDEATRSSDPEVMDQRQALLNAL 418
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: A0A6U4RTW9_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4RTW9_HEMAN)

HSP 1 Score: 468 bits (1203), Expect = 4.550e-161
Identity = 237/398 (59.55%), Postives = 300/398 (75.38%), Query Frame = 1 
Query:   43 RERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKID-SEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAE-QDEEVIQRSQALERALRA 1176
            R++RN+ I   + R +Y ECL ++E+ L  C+ LAEYP+Y KG ILR +G I  SL LFQAAT LNP N +NLKQVG+ LFLLGKHK AL+VY+EA ++  SEDWEVWHNRGLC  +LK+ E A EAF ++NSI RHD+T+L +G++F  Q     A+ VY EALEFSPE+PELLTT+GLL+L+  +N +AF+ LGN+LTHDPR+PK ILAAGSIIQD+ D+DVAL+KYRV+AVQ           G+       Y AA+ACLK+ALY DPFEWI++YNLGLVHLN  QYASAFH+FS++INLK DFA+SYM+L ITL+RL D DNACSAYDKA+++D DYL HLNYA+ L NND   KA +H A F +LF+ LD +A+  D +V ++  AL  AL A
Sbjct:   21 RQKRNYLIHLLYVRKDYEECLRLVEDTLEQCDQLAEYPLYVKGLILRHRGMIPSSLKLFQAATILNPTNVNNLKQVGKSLFLLGKHKGALEVYEEALRLGHSEDWEVWHNRGLCLTYLKRTEEAQEAFMRANSIQRHDATFLQLGQIFTQQEDYKSAIDVYLEALEFSPENPELLTTIGLLYLRLSENFRAFDFLGNSLTHDPRNPKTILAAGSIIQDHSDVDVALIKYRVAAVQTPNSAQLWNNIGMCFFGKQRYVAAIACLKKALYHDPFEWIISYNLGLVHLNTGQYASAFHYFSSSINLKPDFASSYMHLGITLSRLSDIDNACSAYDKAIEMDDDYLFHLNYAIMLTNNDMIPKAKQHLAEFERLFDQLDAEAKASDADVTEQRAALRAALNA 418
[Close]
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Match: K3WTZ6_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WTZ6_GLOUD)

HSP 1 Score: 467 bits (1202), Expect = 8.510e-161
Identity = 232/393 (59.03%), Postives = 303/393 (77.10%), Query Frame = 1 
Query:   52 RNWRIFSTFARHEYPECLAIIEEQLRACNGLAEYPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKHKAALDVYDEAQKIDS-EDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRHDSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGDNQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQ-----------GL-------YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKSDFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNNDEPEKATEHFAAFRQLFEALDPDAEQ-DEEVIQRSQALERAL 1170
            RNW +   + R E+ ECL ++E+ L+   GL+EYP+Y K  ILR  GRIQESL LFQAATCLNP N  NLKQVGR L+LLGKH AA++VY+E   +   +DWE++H+ GLCYM+LK++E+A++ F+ +N+I+RHD+T+L +GKV+ LQ     A+ VY EALEFSPE+PE+LTT+GLL+L+ G+N +AF+ LGN+LTHDPR+PK ILAAGSIIQD+ DMDVALVKYRV+AVQ           G+       + A+VACLKRALY+DPFEWI +YNLGLVHLN  QYASAFH FSAAINLK DF +SYMYLAITL RL+DF+NACSA++KA++++ D+L HLNYA+TL NNDE E+A   F  F ++FEALD + +  D+EV+++ Q+L   L
Sbjct:   32 RNWYLHRLYLRSEFKECLRVVEDVLKTHQGLSEYPLYIKALILRHSGRIQESLQLFQAATCLNPDNKENLKQVGRSLYLLGKHMAAIEVYEEILTMGRVDDWEIYHSIGLCYMYLKEYEKAVDNFQHANTINRHDATFLQLGKVYTLQEDFKAAIAVYLEALEFSPENPEILTTLGLLYLRIGENFRAFDYLGNSLTHDPRNPKTILAAGSIIQDHGDMDVALVKYRVAAVQTPNSAQLWNNIGMCFFGKQRFVASVACLKRALYLDPFEWITSYNLGLVHLNTGQYASAFHFFSAAINLKPDFPSSYMYLAITLGRLDDFENACSAFEKAIEMERDHLFHLNYAITLYNNDEMERAKVQFDRFEEIFEALDDETKNADQEVLEQRQSLLNVL 424
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1131.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV4_ECTSI2.750e-24585.61Bardet-Biedl syndrome 4 n=1 Tax=Ectocarpus silicul... [more]
A0A8J6CHX9_DIALT3.140e-17261.71Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6T9B7X8_9EUKA2.960e-17060.60Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S3GDF2_9EUKA2.430e-16859.80Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A6S9RQ16_CHRCT2.530e-16760.41Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2C5V5_9STRA4.180e-16457.52Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0X8L8_9CHLO7.180e-16458.04Hypothetical protein n=2 Tax=Mantoniella antarctic... [more]
A0A067C533_SAPPC4.520e-16261.32Uncharacterized protein n=4 Tax=Saprolegniaceae Ta... [more]
A0A6U4RTW9_HEMAN4.550e-16159.55Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
K3WTZ6_GLOUD8.510e-16159.03Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig109contigC-linearis_contig109:402151..407325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score678.3
Seed ortholog evalue2.1e-192
Seed eggNOG ortholog2880.D8LKV4
Preferred nameBBS4
KEGG koko:K11447,ko:K16531
KEGG Pathwayko05202,map05202
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000086,GO:0000226,GO:0000242,GO:0000278,GO:0000281,GO:0000288,GO:0000291,GO:0000785,GO:0000910,GO:0000956,GO:0001085,GO:0001103,GO:0001654,GO:0001708,GO:0001750,GO:0001754,GO:0001764,GO:0001838,GO:0001841,GO:0001843,GO:0001894,GO:0001895,GO:0001917,GO:0001947,GO:0002009,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003073,GO:0003085,GO:0003143,GO:0003352,GO:0003356,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005929,GO:0006139,GO:0006325,GO:0006401,GO:0006402,GO:0006464,GO:0006482,GO:0006725,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007098,GO:0007154,GO:0007165,GO:0007166,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007368,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007507,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0008015,GO:0008064,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008214,GO:0008217,GO:0009056,GO:0009057,GO:0009506,GO:0009605,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009892,GO:0009933,GO:0009934,GO:0009987,GO:0009991,GO:0010033,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0010638,GO:0010639,GO:0012505,GO:0014020,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0016358,GO:0016462,GO:0016477,GO:0016569,GO:0016570,GO:0016577,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019216,GO:0019221,GO:0019222,GO:0019439,GO:0019538,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021915,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030054,GO:0030154,GO:0030182,GO:0030534,GO:0030832,GO:0030833,GO:0030837,GO:0030900,GO:0031023,GO:0031090,GO:0031175,GO:0031253,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031514,GO:0031667,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032095,GO:0032096,GO:0032098,GO:0032099,GO:0032101,GO:0032102,GO:0032104,GO:0032105,GO:0032107,GO:0032108,GO:0032231,GO:0032271,GO:0032272,GO:0032391,GO:0032400,GO:0032401,GO:0032402,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032507,GO:0032535,GO:0032870,GO:0032879,GO:0032886,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033210,GO:0033365,GO:0034097,GO:0034260,GO:0034451,GO:0034452,GO:0034453,GO:0034454,GO:0034464,GO:0034504,GO:0034613,GO:0034641,GO:0034655,GO:0034708,GO:0035050,GO:0035097,GO:0035148,GO:0035176,GO:0035239,GO:0035295,GO:0035327,GO:0035845,GO:0035869,GO:0036064,GO:0036211,GO:0038108,GO:0040008,GO:0040011,GO:0040012,GO:0040014,GO:0040018,GO:0042221,GO:0042461,GO:0042462,GO:0042592,GO:0042995,GO:0043005,GO:0043009,GO:0043014,GO:0043086,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043412,GO:0043473,GO:0043928,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044320,GO:0044321,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044451,GO:0044459,GO:0044463,GO:0044464,GO:0044666,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045165,GO:0045185,GO:0045444,GO:0045494,GO:0045724,GO:0045776,GO:0045927,GO:0046483,GO:0046530,GO:0046548,GO:0046700,GO:0046907,GO:0048232,GO:0048468,GO:0048487,GO:0048507,GO:0048509,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048532,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048592,GO:0048598,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050893,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051239,GO:0051240,GO:0051270,GO:0051276,GO:0051301,GO:0051302,GO:0051336,GO:0051346,GO:0051457,GO:0051492,GO:0051493,GO:0051494,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051651,GO:0051656,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0055044,GO:0055087,GO:0060170,GO:0060249,GO:0060255,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060324,GO:0060429,GO:0060491,GO:0060562,GO:0060606,GO:0060612,GO:0060613,GO:0060632,GO:0061371,GO:0061448,GO:0061512,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070076,GO:0070491,GO:0070727,GO:0070887,GO:0070925,GO:0070988,GO:0071310,GO:0071345,GO:0071495,GO:0071539,GO:0071557,GO:0071704,GO:0071840,GO:0071944,GO:0072175,GO:0072359,GO:0072393,GO:0072595,GO:0072698,GO:0080090,GO:0090066,GO:0090304,GO:0090596,GO:0097458,GO:0097499,GO:0097708,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098590,GO:0098791,GO:0110020,GO:0110053,GO:0120025,GO:0120031,GO:0120032,GO:0120034,GO:0120035,GO:0120036,GO:0120038,GO:1901360,GO:1901361,GO:1901564,GO:1901575,GO:1902017,GO:1902019,GO:1902115,GO:1902117,GO:1902494,GO:1902855,GO:1902903,GO:1902904,GO:1903047,GO:1903546,GO:1905508,GO:1905515,GO:1990234,GO:2000145
EggNOG free text desc.cellular component assembly
EggNOG OGsCOG0457@1,KOG1124@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons10
Model size1182
Cds size1182
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig109.1131.1prot_C-linearis_contig109.1131.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig109 402151..407325 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927421.9128232-CDS-C-linearis_contig109:402150..4023191622927421.9128232-CDS-C-linearis_contig109:402150..402319Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 402151..402319 +
1690879691.6311975-CDS-C-linearis_contig109:402150..4023191690879691.6311975-CDS-C-linearis_contig109:402150..402319Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 402151..402319 +
1622927421.925141-CDS-C-linearis_contig109:402691..4028581622927421.925141-CDS-C-linearis_contig109:402691..402858Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 402692..402858 +
1690879691.6469042-CDS-C-linearis_contig109:402691..4028581690879691.6469042-CDS-C-linearis_contig109:402691..402858Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 402692..402858 +
1622927421.9371994-CDS-C-linearis_contig109:403291..4034321622927421.9371994-CDS-C-linearis_contig109:403291..403432Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 403292..403432 +
1690879691.6563542-CDS-C-linearis_contig109:403291..4034321690879691.6563542-CDS-C-linearis_contig109:403291..403432Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 403292..403432 +
1622927421.9465458-CDS-C-linearis_contig109:403982..4040301622927421.9465458-CDS-C-linearis_contig109:403982..404030Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 403983..404030 +
1690879691.6656787-CDS-C-linearis_contig109:403982..4040301690879691.6656787-CDS-C-linearis_contig109:403982..404030Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 403983..404030 +
1622927421.9916916-CDS-C-linearis_contig109:404266..4044181622927421.9916916-CDS-C-linearis_contig109:404266..404418Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 404267..404418 +
1690879691.6763616-CDS-C-linearis_contig109:404266..4044181690879691.6763616-CDS-C-linearis_contig109:404266..404418Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 404267..404418 +
1622927422.0020888-CDS-C-linearis_contig109:404883..4049501622927422.0020888-CDS-C-linearis_contig109:404883..404950Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 404884..404950 +
1690879691.6874883-CDS-C-linearis_contig109:404883..4049501690879691.6874883-CDS-C-linearis_contig109:404883..404950Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 404884..404950 +
1622927422.0123851-CDS-C-linearis_contig109:405848..4059821622927422.0123851-CDS-C-linearis_contig109:405848..405982Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 405849..405982 +
1690879691.697835-CDS-C-linearis_contig109:405848..4059821690879691.697835-CDS-C-linearis_contig109:405848..405982Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 405849..405982 +
1622927422.022487-CDS-C-linearis_contig109:406292..4063981622927422.022487-CDS-C-linearis_contig109:406292..406398Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 406293..406398 +
1690879691.7095106-CDS-C-linearis_contig109:406292..4063981690879691.7095106-CDS-C-linearis_contig109:406292..406398Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 406293..406398 +
1622927422.0335488-CDS-C-linearis_contig109:406771..4068881622927422.0335488-CDS-C-linearis_contig109:406771..406888Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 406772..406888 +
1690879691.723615-CDS-C-linearis_contig109:406771..4068881690879691.723615-CDS-C-linearis_contig109:406771..406888Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 406772..406888 +
1622927422.044456-CDS-C-linearis_contig109:407244..4073251622927422.044456-CDS-C-linearis_contig109:407244..407325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 407245..407325 +
1690879691.732122-CDS-C-linearis_contig109:407244..4073251690879691.732122-CDS-C-linearis_contig109:407244..407325Chordaria linearis ClinC8C monoicousCDSC-linearis_contig109 407245..407325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig109.1131.1

>prot_C-linearis_contig109.1131.1 ID=prot_C-linearis_contig109.1131.1|Name=mRNA_C-linearis_contig109.1131.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=394bp
PVHRLDTGEEGVVLRERRNWRIFSTFARHEYPECLAIIEEQLRACNGLAE
YPIYAKGQILRAQGRIQESLALFQAATCLNPQNPSNLKQVGRCLFLLGKH
KAALDVYDEAQKIDSEDWEVWHNRGLCYMHLKQFERALEAFEQSNSISRH
DSTYLHIGKVFRLQGKLAEALTVYEEALEFSPESPELLTTVGLLHLQQGD
NQKAFESLGNALTHDPRDPKAILAAGSIIQDNQDMDVALVKYRVSAVQGL
YTAAVACLKRALYVDPFEWIVAYNLGLVHLNNAQYASAFHHFSAAINLKS
DFAASYMYLAITLARLEDFDNACSAYDKALDIDGDYLTHLNYAVTLLNND
EPEKATEHFAAFRQLFEALDPDAEQDEEVIQRSQALERALRAS*
back to top

mRNA from alignment at C-linearis_contig109:402151..407325+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig109.1131.1 ID=mRNA_C-linearis_contig109.1131.1|Name=mRNA_C-linearis_contig109.1131.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5175bp|location=Sequence derived from alignment at C-linearis_contig109:402151..407325+ (Chordaria linearis ClinC8C monoicous)
CCGGTGCATCGGCTTGACACGGGAGAGGAGGGGGTAGTCCTCAGAGAGCG
TCGAAATTGGCGGATCTTCTCCACCTTCGCGAGGCATGAGTATCCGGAGT
GCCTTGCAATAATTGAGGAGCAGTTGCGGGCTTGCAACGGTCTGGCCGAG
TACCCGATATACGCCAAGGGTAAGTGTCGTCATGTCTACGGTACTCTGCA
TCATCATCCTCCATCAAGTTTCAATCCAATCTCAAACAAAGCCAGTGGGA
CGCAGACTCTCCAAACGGAAATGTCGTCCGTTATTAGTTATAAACTGCAT
ATAGAGAACAAACGCGTGGTTCCGGAAGAAGTACTGAATTTGAATTTCCC
CAGATATTAGATCTTGTACCGTCGGCGCTACAAAAATGCTGGCGAAAGGC
TAGTTTCGTTGCATCTAGTCTAAGATTACCCTATCATAGATGTCTCCCGG
GTGGGTCGCCCAAATGCTTATTAAACCTGCCTCTGTGCGCCGCCTAATAT
CACGTGTTCCGGAAATGGTGTTTGTGTGTCGCTTCACTCAGGCCAGATCT
TGCGAGCGCAGGGTCGAATACAGGAGTCGCTGGCGTTATTTCAGGCGGCT
ACATGCCTAAATCCACAGAACCCATCCAACCTGAAGCAAGTGGGGCGGTG
CCTCTTTCTCTTGGGCAAGCACAAGGCCGCCCTCGACGTCTACGACGAGG
CGCAGAAGGTCAGAGTACGACACAAATCCTCCAGAGTTCGTATTTTTCGC
CGACGTGAAATACGACTAATTAGTGTGGCACACACAAGAAGTCTTGAAAG
GTGATGCAGCTGTTTTCGTCGTATCAGGCCCCGACCCACTTTAAGAGCAC
ATTTATGAGCTCTCGTTGGACACTTTCTTTTTCGGCTACATTACTATCTA
ACGGTGTAATCGTAGGCGGAGTACATACTGACTAGGGGAGTTCAGAAAGA
AAAAATAAACTAGTCCAAATAGTAGTTTCACGTCGCTGGGGAAACAAAAA
ACGAGTGCCGGCGCCCTTCTCTGTGCCCTAAAGAAGTCGATTCTACCCAC
ACGAACATCGTTCAAGCTCGTTAGTATCTCTCTTGCCATAGATTCATGAC
GGTACCACCGAGCGTCACCCCCACTTTGCTGTTTATGGCAGATCGACTCG
GAAGACTGGGAGGTGTGGCACAACCGAGGGCTTTGCTACATGCATCTCAA
GCAGTTCGAGCGAGCGCTGGAAGCGTTTGAGCAGTCAAACTCCATCAGCA
GACACGACTCCACCTACCTGCATATCGGCAAGGTACATAAACAGTAATCA
AGGAGGAAGATGCAATGGTTCAGTTGTTCAGGTGTCAGCCTCAAAACGTT
GGATGTGTCTCCCATTGAAGCTGTAGGCGATGTCGTCATTGGAGAAAACG
AAGCTCCTACAAATGCCCCCCTCGTCGTCTCTCGACTATGATGTAAACTC
TACGCTGCCAAGCTCCTCCCCCAACAAAGGCAGTCATGTCGGGTTGTCGT
CCCAGTTGGTCGCTGGGGTTGTTTGATTTAGACGTGGTGGCGACGGTGGT
GGCGACGGCGACGGCGACCAAGATTCGTTTTGGCCTTTATGATCCCGTCG
TTCCCCGCACCACGATGAACACCTTTACCGTTCCTTTCTTGAGATATCAT
ACGCTGAGAGGCATGTGGTATGTTGGGACCAGGAGGATGGTATGCACCGC
GCGGTATCACTCATGAGCTGGCAGCAGTTACTCGCGTTGTAACCCCCGAT
GTGGGACCTTCCCCGATAATCAAACGGCTACAAACACATGGCCACGCTCA
CTTCGTAATGTGTTCTTGAACACGGCGAACAGGTGTTTCGACTTCAGGGT
AAGCTAGCGGAAGCCCTGACAGTTTACGAGGTGAGCGTACACCGTAATCC
GTGCGCATACTCTCCCTAGTGCTGTTTTCGCGAACGATGCGCGAAACAAC
AGATTTTCGTTGCGAGCGAACTTGCAGAGAAGTAGATTTATTCAATTTCT
TATTTCTGGGAAGCCTAGTCGCAGGAGATCAAGGACCCCCCTACCTAGAC
TCTTTGCACCCTGACGATGGCCGTGTTGTTTTCCGCGATGAAATAAACCC
TTATTCTTGCTCGCAGGAAGCTCTGGAGTTCTCGCCCGAGAGCCCCGAGC
TGCTGACCACGGTTGGGCTGCTGCACCTACAGCAGGGAGACAACCAGAAG
GCTTTCGAGAGTCTCGGAAACGCGCTCACGCACGACCCCAGGGATCCCAA
AGCCATCCTGGCGGCAGGGTGAGTTGAGTCAATGAGCCATGCTATGCAGG
GTGGAGCGGTGTCTATCTGCTGGGGAGAGCGCCGCAACGCAGTCGAATGC
GGTCATGAATGTGGTGGTGGTAATTTATCCAATATTTCGTCTGCGCTGAA
CCTTTTGGGTTGCGCTCCGTTTTGCTGCCGAGAGGCAACAATAATCGTGC
CAGAGACACGAGCGGCTGACATAGGTCTTGCACGTGCGATGTCCCGATCG
ACTTCACCCAGAGTGCAAACAAACGCACCTCAATGGTCTAGGCGACCCAC
CCTTCGTGCCAAGAGGAGGCGAAGTTTAGTCCAGACGCGTGCAGCCTCAG
TAAACGAAGGCAACAAGGAAACGAAAAACAGCCAACCAAATCGAGCAAAC
ATCTGGACGACACAGCGCGTACATCCCCACATACACCGACGAACACAAAC
GAACGCATGAATGCGCGAACTACCGCCCTGAAGGTCGATTATTCAGGACA
ACCAGGACATGGATGTGGCACTCGTCAAGTACAGAGTCTCGGCTGTTCAG
GTGCGCAGGGGGGATGAGAGGGCATAAAATCAATCGTAACCCGTTCGTGA
CCGCCACCGGAATACTGACGGTGTCGAGAGCGGCTCGACATATGGTGTCG
AAACATCAACCCCACTCGGAACGACATTCGAGAAGCACGAAAACTGTTTA
AGAGAACCATGCGACATTTTTTTCGTGGGGGGTTGCGCTTTTTTCCATGT
CGGAACTGCAAAGCTGCCACCTTCTAGCCCTATTATAGGTGCGGGCAGTA
CACATAATACGAACTGATTCCTGACGTACCTTGGGCCGTGTGCCATAGGT
CAGGCCGACTCCGCCCAAACTGTTCCATTAACGGTCGACATTCCCCATAC
CATTCCAACAGCCCTTTCCTGAAGTAGCTGGTATTACTGTTCAAATGGAA
CGTGTCTGCGTAATTTGTTTGTGTACCGCAACCCTTCGTCCCAGTTCTAC
TCGAACTGATGGCGTGACTTCGTAGTTGGTGAGTTTACCTTCGTCCTCTC
TCCTTCGCTCTCTCAGACCCCAAACTCGGCGCAGCTGTGGAACAACGTCG
GCATGTGCTTCTTCGGAAAGGTAAGGGTAATGGATTTTGACTTGATGTGA
AAAGTCTGTTGGGTGACCACGCCCGAACTACTTAACGCTAGTGGTAGAAT
GGGGTGCCTGCAGTAGGAAGATCGCCCGGGCGCACTAGGAGCTCTGCGTT
GCAGATGAGGTGCCTGAAGTTGGAGCACGGTACAGTGGCGGTTAGCAAGG
CCTAAGCGATGAGCGGCTGGAAGAGTTGGGGTAACCTACGAGCGGCTTCG
GCAACTTCTCTGTAGTCCCCGAAGTTCTGCCCCTCTCCTCGCCGCCATGA
AATACCACGCACGCCACCTCTCGCTCCCGCGCCCGCGCGTTACTGAAGGG
CTTGTACACAGCCGCGGTGGCGTGTCTGAAGCGTGCTCTCTACGTGGACC
CGTTCGAGTGGATAGTCGCGTACAACTTGGGCCTGGTTCACCTCAACAAC
GCGCAGTACGCCTCTGCCTTTCACCACTTCAGGTATGCTCGAAGCCAAAG
TGGAATTGATTCCGTGGTGCAGTCATTATCTCACGCATTTTCCGTTTGTT
TTGCGTTCGATTCTTACCAGGAGCAAATCACCATTTCGGACTCCTGTATC
TGTGCGAGCTGTAGTAGGCCCGGCTCTTACGCGTTAGGGACATGGGCTAT
AATTTGCGCAGCGCAGGGTGTGTCCGTTATCCCGTTGTGATCATTTTTTC
AAGGCTCGAGATGGGGGCTCTGATATCCGCACGCTGCGCGAGAGGCACTC
ATTATCGTACGCAACTCCGTGTGTACCTTTTCGTTTCGGCAGCGCGGCCA
TCAACCTGAAATCAGACTTTGCGGCGTCCTACATGTACCTGGCGATAACG
CTCGCTAGATTGGAGGATTTCGACAACGCGTGCAGCGCTTACGACAAGGT
ACATGACGGAGGCGGTGGTTGGGAATCCGTGGTCCTGGAATAGGCTTCGT
CTTGCGGGTGCACGTAGCGCACGAAGTGCACGCAGCGCAAGATATGTTAT
CGGTAGGCACAGGAGTAATGCAATGGGCACCGTTAACGAACTGCGCGGTA
TCCAACCGTCAGACTGCCTTTTGCACGGCGCTTCAGGATCTTGAAAATCG
GCCAGAGGAGATTCACCTTTTTTTCTCATATCTCCCAATCCGGCTTTTGG
GTCCTGGCTCTCAACTATGGCTTCTAGCTGGACGACGACGGACTACCTAC
CCCCCCTAAGCCTACCTATATGCAACCTCATGCTGTGTTTCTTTGTGCGG
TGTACGGGGGGGTTGTTACAGGCCCTGGATATCGATGGAGATTACCTGAC
GCACCTGAACTACGCCGTGACTCTGCTCAACAACGACGAGCCGGAGAAGG
CCACGGAGCACTTCGCCGCTTTTAGGCAGCTCTTCGAGGTATTGGTGGTG
TGGTGTTGTTCGTGGTACTTGGGCCAACATGCGAACCATGCCGAAATCCA
TACGAAGAAGGTAGCTTAGCAGATGGCCCATAATCAGAAACATCTGTGTG
TTGGCTACAAATATACCGGAAAGCTACCAACAGGGTGTTTGCATGGCAAA
AACATCCGGGTCGATCAACCATATGTCCGGGAAATCATGCGGCCAAATCT
TTCCTGCACATAACTGTATGCAACGCTTCTTGCCACATCCACCTGAGGGT
TACCAACCAAGATGACCCTTGACCGCGCCGCGCCCTGCTTCTCGCTCTTG
ACACATACCGCCGAACGGCAACGCACCAACACATATCACCGCAGGCTCTC
GATCCCGACGCGGAGCAGGACGAAGAGGTGATACAGAGGAGCCAGGCTCT
TGAGCGCGCCCTTCGGGCTTCCTGA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig109:402151..407325+

>mRNA_C-linearis_contig109.1131.1 ID=mRNA_C-linearis_contig109.1131.1|Name=mRNA_C-linearis_contig109.1131.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2364bp|location=Sequence derived from alignment at C-linearis_contig109:402151..407325+ (Chordaria linearis ClinC8C monoicous)
CCGGTGCATCGGCTTGACACGGGAGAGGAGGGGGTAGTCCTCAGAGAGCG
TCGAAATTGGCGGATCTTCTCCACCTTCGCGAGGCATGAGTATCCGGAGT
GCCTTGCAATAATTGAGGAGCAGTTGCGGGCTTGCAACGGTCTGGCCGAG
TACCCGATATACGCCAAGGCCGGTGCATCGGCTTGACACGGGAGAGGAGG
GGGTAGTCCTCAGAGAGCGTCGAAATTGGCGGATCTTCTCCACCTTCGCG
AGGCATGAGTATCCGGAGTGCCTTGCAATAATTGAGGAGCAGTTGCGGGC
TTGCAACGGTCTGGCCGAGTACCCGATATACGCCAAGGGCCAGATCTTGC
GAGCGCAGGGTCGAATACAGGAGTCGCTGGCGTTATTTCAGGCGGCTACA
TGCCTAAATCCACAGAACCCATCCAACCTGAAGCAAGTGGGGCGGTGCCT
CTTTCTCTTGGGCAAGCACAAGGCCGCCCTCGACGTCTACGACGAGGCGC
AGAAGGCCAGATCTTGCGAGCGCAGGGTCGAATACAGGAGTCGCTGGCGT
TATTTCAGGCGGCTACATGCCTAAATCCACAGAACCCATCCAACCTGAAG
CAAGTGGGGCGGTGCCTCTTTCTCTTGGGCAAGCACAAGGCCGCCCTCGA
CGTCTACGACGAGGCGCAGAAGATCGACTCGGAAGACTGGGAGGTGTGGC
ACAACCGAGGGCTTTGCTACATGCATCTCAAGCAGTTCGAGCGAGCGCTG
GAAGCGTTTGAGCAGTCAAACTCCATCAGCAGACACGACTCCACCTACCT
GCATATCGGCAAGATCGACTCGGAAGACTGGGAGGTGTGGCACAACCGAG
GGCTTTGCTACATGCATCTCAAGCAGTTCGAGCGAGCGCTGGAAGCGTTT
GAGCAGTCAAACTCCATCAGCAGACACGACTCCACCTACCTGCATATCGG
CAAGGTGTTTCGACTTCAGGGTAAGCTAGCGGAAGCCCTGACAGTTTACG
AGGTGTTTCGACTTCAGGGTAAGCTAGCGGAAGCCCTGACAGTTTACGAG
GAAGCTCTGGAGTTCTCGCCCGAGAGCCCCGAGCTGCTGACCACGGTTGG
GCTGCTGCACCTACAGCAGGGAGACAACCAGAAGGCTTTCGAGAGTCTCG
GAAACGCGCTCACGCACGACCCCAGGGATCCCAAAGCCATCCTGGCGGCA
GGGAAGCTCTGGAGTTCTCGCCCGAGAGCCCCGAGCTGCTGACCACGGTT
GGGCTGCTGCACCTACAGCAGGGAGACAACCAGAAGGCTTTCGAGAGTCT
CGGAAACGCGCTCACGCACGACCCCAGGGATCCCAAAGCCATCCTGGCGG
CAGGGTCGATTATTCAGGACAACCAGGACATGGATGTGGCACTCGTCAAG
TACAGAGTCTCGGCTGTTCAGGTCGATTATTCAGGACAACCAGGACATGG
ATGTGGCACTCGTCAAGTACAGAGTCTCGGCTGTTCAGGGCTTGTACACA
GCCGCGGTGGCGTGTCTGAAGCGTGCTCTCTACGTGGACCCGTTCGAGTG
GATAGTCGCGTACAACTTGGGCCTGGTTCACCTCAACAACGCGCAGTACG
CCTCTGCCTTTCACCACTTCAGGGCTTGTACACAGCCGCGGTGGCGTGTC
TGAAGCGTGCTCTCTACGTGGACCCGTTCGAGTGGATAGTCGCGTACAAC
TTGGGCCTGGTTCACCTCAACAACGCGCAGTACGCCTCTGCCTTTCACCA
CTTCAGCGCGGCCATCAACCTGAAATCAGACTTTGCGGCGTCCTACATGT
ACCTGGCGATAACGCTCGCTAGATTGGAGGATTTCGACAACGCGTGCAGC
GCTTACGACAAGCGCGGCCATCAACCTGAAATCAGACTTTGCGGCGTCCT
ACATGTACCTGGCGATAACGCTCGCTAGATTGGAGGATTTCGACAACGCG
TGCAGCGCTTACGACAAGGCCCTGGATATCGATGGAGATTACCTGACGCA
CCTGAACTACGCCGTGACTCTGCTCAACAACGACGAGCCGGAGAAGGCCA
CGGAGCACTTCGCCGCTTTTAGGCAGCTCTTCGAGGCCCTGGATATCGAT
GGAGATTACCTGACGCACCTGAACTACGCCGTGACTCTGCTCAACAACGA
CGAGCCGGAGAAGGCCACGGAGCACTTCGCCGCTTTTAGGCAGCTCTTCG
AGGCTCTCGATCCCGACGCGGAGCAGGACGAAGAGGTGATACAGAGGAGC
CAGGCTCTTGAGCGCGCCCTTCGGGCTTCCTGAGCTCTCGATCCCGACGC
GGAGCAGGACGAAGAGGTGATACAGAGGAGCCAGGCTCTTGAGCGCGCCC
TTCGGGCTTCCTGA
back to top