mRNA_C-linearis_contig109.1115.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A6H5L8Q2_9PHAE (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8Q2_9PHAE) HSP 1 Score: 753 bits (1944), Expect = 1.340e-266 Identity = 443/568 (77.99%), Postives = 471/568 (82.92%), Query Frame = 1
Query: 1 MATLADSFLDDLDELGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEV-------------DEVPTGRRRDTALDGAAXXXXXXXXXXXXXXXXXVKSEXXXXXXXXXXXDSALGRIGDRTVGSVAKLRKSDRFKNQMAEIGECLKREPAPRVGPLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQ---CMGQEKKTLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMSAKPK 1656
MATLADSFLDDLDELG XXXXXXXXXXXXXXXXXXX EV DEVPTGRRR+ LDG A XXXXXXXX +S LGRIGDRTV +VAKLRKS+RFK+QMAEI ECLKREPAPRVG LEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADY+RTVQVM+NEMDMT V+L+SALPQTTVMVVSVTGSTTSG PLSEE L EC+KGC+EYEAL AKA+ILDFVETRM SMAPNVCAL+GSRITAQLL TGGL MSKTP+CN Q MGQEKKTLSGFSSKATV+HAGLL+ DVVQ+APPYLR KAL+V AAKVSLASR D + NDPSG +GR+WRAEVEDKIEKWQE+QTAKTKKALPKPDDMPARKRGG+RVR FK+KFAMTDVRKEANRMGFASMADEYSDTAMG D+GMLG+ G SGRVRAPMKKE KQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNA+K+KKVMAANKKWFDSSSGFMSAKPK
Sbjct: 1 MATLADSFLDDLDELGESSDXXXXXXXXXXXXXXXXXXXSGEGDRDDDMEVHDTRKNESDRAGTDEVPTGRRREKGLDGTAGNETAGGGQXXXXXXXXXXXXEGEGL------ESTLGRIGDRTVDAVAKLRKSERFKSQMAEIDECLKREPAPRVGALEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYVRTVQVMRNEMDMTQVELDSALPQTTVMVVSVTGSTTSGQPLSEEDLHECIKGCEEYEALAAAKASILDFVETRMTSMAPNVCALIGSRITAQLLGLTGGLTAMSKTPSCNLQEFPVMGQEKKTLSGFSSKATVSHAGLLYQSDVVQLAPPYLRTKALRVTAAKVSLASRFDSYGNDPSGHVGRQWRAEVEDKIEKWQEMQTAKTKKALPKPDDMPARKRGGRRVRSFKQKFAMTDVRKEANRMGFASMADEYSDTAMGKDYGMLGKSG-----------SGRVRAPMKKEMKQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNADKEKKVMAANKKWFDSSSGFMSAKPK 551
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A836CKH5_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKH5_9STRA) HSP 1 Score: 485 bits (1249), Expect = 3.640e-162 Identity = 261/461 (56.62%), Postives = 345/461 (74.84%), Query Frame = 1
Query: 307 ALGRIGDRTVGSVAKLRKSDRFKNQMAEIGECLKR-----EPAPR----VGPLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLSGFSSKAT-VAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQ-NVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMSAKPK 1656
AL + R V SVAK+ +S+R+ N M + E ++ +P+ VG +E DP+Y+L+V SNE I DID E+V+VHRFVVD YS KFPEL+S++ P DYIRTVQ+MKNEMDMT + L++ LPQT+VMVVSVTGSTT G L E L+ L+GC E+ AL EAK+ +L FVE +M+++APN+CA++GSRI AQL+ + GGL +S PACN Q MGQE++ L+GF++ AT AHAGL+F+ D+VQ AP YLR+K LKV +AKV+LA R D DP+ +GR++R+E+E K+EKWQE AK K+ALPKPD+ P KRGGKRVR+ KEKF +TD++KE N+MGFAS A EY D+AMG DFGMLG+ G R+RAP +K+++Q V+KKL++A +SSG TNGL+SS++FTP+QG+ELVNPNA+K+ KV AAN KWFD++SGFMSAKPK
Sbjct: 57 ALKALESREVTSVAKVLRSERYLNHMKAVLESMQHADDDGKPSANGEGAVGSVEQDPQYQLIVKSNEFIADIDDELVQVHRFVVDAYSPKFPELESIVTDPGDYIRTVQLMKNEMDMTRLPLDTVLPQTSVMVVSVTGSTTPGKALGEAELKRVLEGCAEFTALAEAKSTLLTFVEGKMSAIAPNMCAIIGSRIAAQLMGQAGGLAALSNIPACNLQTMGQERRHLAGFATTATGTAHAGLIFYSDLVQSAPVYLRRKLLKVASAKVTLAVRCDLHNQDPA--VGRRFRSELEAKLEKWQEPDQAKIKRALPKPDEAPKSKRGGKRVRRLKEKFTLTDIQKEQNKMGFASQAYEYGDSAMGRDFGMLGKAGN------------RMRAPAQKKTQQLGVAKKLRMAAVSSGNTNGLSSSIIFTPVQGIELVNPNADKEAKVKAANAKWFDTTSGFMSAKPK 503
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A7S2XZL3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZL3_9STRA) HSP 1 Score: 470 bits (1210), Expect = 4.960e-157 Identity = 260/461 (56.40%), Postives = 336/461 (72.89%), Query Frame = 1
Query: 301 DSALGRI-GDRTVGSVAKLRKSDRFKNQMAEIGECLKREPAPRVGP--------LEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADE-YSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMSAKP 1653
D+ LG+I G + + SV +LRKS RF+ M + +++ + G LED+ EY+L+V SN+LI DID E++ VHRFV D YS+KFPEL+SL+ DYIR V+ + NEMDMT V+L L +VM+VSVTGSTTSG PLS + L++CL+G +E + L +AK +IL+FVE+RM ++APN+CAL+GSR+ AQLL +GGL +SK P+CN Q MGQEK+ L+G+ + A++ H GL++HC++VQ APPYLR KALKV AAK+ LA+R D FQ D G +G+K R E+EDKIEKWQE Q AKTKKALP PD P +KRGGKRVR++KEKF T+VRK NR FA + E Y+D AMGL+FG+LG+ G G +RAP KKE KQ V +K KV+ LSSG TNGL SSLVFTPIQG+ELVNPNA+ +K V AANKKWF+++SGFMSAKP
Sbjct: 6 DAVLGQIAGQQGLDSVVRLRKSRRFQGHMQRLERLQQQQDSSSSGMAQSQDGGRLEDNEEYQLIVESNQLILDIDEEVINVHRFVCDLYSKKFPELESLLTNRLDYIRVVERIGNEMDMTLVELGDLLAPASVMLVSVTGSTTSGQPLSPQDLDQCLQGAREVQDLEQAKTSILEFVESRMTAIAPNICALIGSRLAAQLLGLSGGLTQLSKIPSCNLQVMGQEKRALAGYGAAASLPHCGLIYHCELVQDAPPYLRSKALKVTAAKLVLAARVDSFQQDMEGALGKKLRTELEDKIEKWQEPQKAKTKKALPAPDSKPKKKRGGKRVRRYKEKFEQTEVRKGLNRRSFAKLDTESYADDAMGLEFGLLGKSG------------GTLRAPKKKEQKQ-VVRKRKVSTLSSGATNGLASSLVFTPIQGIELVNPNAQAEK-VAAANKKWFNANSGFMSAKP 452
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A7S2C7I0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C7I0_9STRA) HSP 1 Score: 462 bits (1190), Expect = 2.040e-153 Identity = 254/453 (56.07%), Postives = 314/453 (69.32%), Query Frame = 1
Query: 301 DSALGRIGDRT-VGSVAKLRKSDRFKNQMAEIGECLKREPAPRVGPLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLS-GFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMSAKP 1653
D LG I D + SVA LR SD F M I L+R P P G +E+DPEY+LVV NEL+Q ID EMV VH++VVD YS+KFPEL+SL+PQ DY++ VQ + NEMDMT VDL LP V+ VS+TGSTTSG PLSE L +C++GC+E L E K L FVE+RMN +APNVCAL+ + I AQL+ GGL MSK P+CN Q +GQ+K+ L GF+S A + H GL+++ VQ APPYLR +ALK++AAKV+LA+R D Q +PS +GRK R EV+DKI+KWQE AKTKK+LP PD+ PA+KRGGKR RK KEKF MT++RKE NR F++ EY D AMGLD GMLG+ G G++R P KKESK K + +SSG TNGL+SSLVFTP+QGLEL NP A + KV ANKKWF S+GF+SAKP
Sbjct: 54 DDMLGNIHDEAGIRSVATLRTSDYFVKHMTAINAALERPPQPITGNVEEDPEYQLVVTCNELVQKIDDEMVNVHKYVVDTYSKKFPELESLVPQRLDYMQVVQTIGNEMDMTMVDLSDILPNAVVISVSMTGSTTSGQPLSESDLSQCMQGCREAVELEEDKMKSLTFVESRMNMVAPNVCALIDTIIAAQLMGLAGGLVMMSKIPSCNLQILGQQKQVLGHGFASVAAMPHTGLIYYSTAVQRAPPYLRMRALKLVAAKVALAARMDLHQKEPSDALGRKLREEVDDKIDKWQEPPKAKTKKSLPAPDNRPAKKRGGKRARKHKEKFGMTEMRKETNRRTFSNFEGEYGDDAMGLDLGMLGKGG------------GKLRMPQKKESKNAAKIKKRAIQMSSGATNGLSSSLVFTPVQGLELANPTAN-EAKVSDANKKWFSQSNGFLSAKP 493
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A7S4DKU2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DKU2_HETAK) HSP 1 Score: 434 bits (1117), Expect = 2.920e-143 Identity = 238/409 (58.19%), Postives = 301/409 (73.59%), Query Frame = 1
Query: 436 LEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKK--LKVANLSSGQTNGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMSAKPK 1656
LE +PEY+L+V SN+L+QDID E++ +HR+V D YS+KFPEL+SL+P +Y++ VQ + NEMDMT V+L LP +VM+VSVTGSTTSG PL E L ECL+G + AL AKA +L FVE+RM +APN+ AL+GSR+ A L+A GGL +SK P CN Q MGQEK+ L+GF + A + H G++++ ++VQ P LRQKALKV AAK +LA+R D +Q+ PSG+ G++ R E+EDKI+KWQE Q KTKKA PKP+ KRGGKRVRKFKEKFAMTDVRKE R FAS+ EY D +MGL+FG+LG+KG GR+RAP KKE KQ +S K +VAN+SSG TNGL SSLVFTP+QG+ELV+P+ KKV ANKKWFD SSGF+SAKPK
Sbjct: 46 LERNPEYQLIVDSNQLMQDIDDEIINIHRYVCDVYSKKFPELESLLPNKLEYMQVVQRIGNEMDMTEVELSDILPSASVMLVSVTGSTTSGQPLPEADLAECLEGARAALALDAAKAKVLGFVESRMALIAPNLVALLGSRLAAVLMALAGGLLALSKIPCCNLQVMGQEKRALAGFGNAAAMKHTGIIYYSELVQSCPVGLRQKALKVTAAKCALAARVDSYQSAPSGQKGQELRQEIEDKIQKWQEPQEGKTKKARPKPEGGRKSKRGGKRVRKFKEKFAMTDVRKELGRRTFASLDAEYGDDSMGLEFGLLGKKG------------GRLRAPPKKEKKQKLSAKNQRRVANVSSGATNGLASSLVFTPVQGIELVDPS----KKVEEANKKWFDPSSGFLSAKPK 438
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A7S2SGQ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ5_9STRA) HSP 1 Score: 432 bits (1112), Expect = 4.310e-141 Identity = 245/472 (51.91%), Postives = 311/472 (65.89%), Query Frame = 1
Query: 256 VKSEXXXXXXXXXXXDSALGRI---GDRTVGSVAKLRKSDRFKNQMAEIGECLKREPAPRVGPLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKK-TLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELV-NPNAEKDKKVMAANKKWFDSSSGFMSAKPK 1656
VK E D LG I GD T SVA LR+S F + M I E L+ P+ G +EDDPEY+L+V+ NELIQ ID E++ V++FV D Y KFPEL+SL+P DY+R VQ + NEMDMT VDL + LP V+ VS+TGSTTSG PL E+ L +C GC+E L +AK IL FVE+RM+ +APN+CA++ + I AQL+ GGL MSK PACN Q +GQ K L GF + A + H GL++ VQ APPYLR +ALK++AAKV+LA+R D Q++PSG G K R E++DK+ KWQE Q A+TKKALP PD+ P++KRGGKR RKFKEKF +T+++KE N+ FA+ EY D AMG D GMLG+ SGR+R P KKE K K K +SSG TNGL+SSLVFTP+QGLEL ++ +V AN+KWF SSGFMSA+PK
Sbjct: 80 VKVEESGDGDEDEDLDDVLGSIAAGGDIT--SVATLRRSAYFTDHMQRIEEALEAPPSAVRGAVEDDPEYQLIVSCNELIQKIDDEILTVYKFVADLYGTKFPELESLVPNRLDYVRVVQAIGNEMDMTMVDLSAILPNALVISVSMTGSTTSGQPLPEKDLLQCNSGCQEALDLEDAKRKILHFVESRMSMVAPNICAVLDTVIAAQLMGLAGGLSAMSKIPACNLQVLGQNKLGNLGGFGAAAALPHTGLIYFTTAVQQAPPYLRMRALKLVAAKVALAARIDLHQSEPSGTAGAKLRVEIDDKVTKWQETQQARTKKALPIPDEKPSKKRGGKRARKFKEKFGLTELQKETNKRTFANFEGEYGDDAMGNDLGMLGKS------------SGRLRLPAKKEQKLAAKKVKKAIQMSSGATNGLSSSLVFTPVQGLELAAEDTGAREARVKEANQKWFSQSSGFMSARPK 537
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A7S1U3H0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H0_9STRA) HSP 1 Score: 402 bits (1034), Expect = 1.270e-129 Identity = 224/450 (49.78%), Postives = 300/450 (66.67%), Query Frame = 1
Query: 325 DRTVGSVAKLRKSDRFKNQMAEIGECLKREP----APRVGPLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKK-TLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQNDPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASM-ADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQTNGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMSAKPK 1656
+ T+ SVAKLR+S ++ MA + L+ E A GP E DP Y+LVVA NE I+ E +V RFV D+Y+ KFPEL+SL+ P D+ +TV + NEMD+T+VDL LP TVMVVSVTGSTT+G L E L ECLKGC+E L + +L FVE RM +APNVCAL+G+++ A+LLA GGL MS+ P+CN Q +GQ+K TL+GFS+ A H G++ + D+ Q APPYLR KALKV AAKV LA+R+D F D SG++G K+R ++E+KIEKWQE KALPKPD + ++RGG+R R KE+F +T++ KEANR F +M EY + AMGL FG LG K L ++ + MK++ +Q + + N + +G++SSLVFTP+QGLELV+P AE ++V ANKKWF++SSGF+SAKPK
Sbjct: 74 EETLESVAKLRRSRAYREHMAAVDAALEAEASGSQAEWTGPPEQDPSYQLVVACNEFTSQIEEETAKVFRFVADQYAVKFPELESLVSNPLDFAKTVSAIGNEMDLTNVDLNDILPSATVMVVSVTGSTTAGVALRPEVLAECLKGCEEVNGLDADRRTLLSFVEGRMMGLAPNVCALIGAQVAARLLAIAGGLNAMSRVPSCNLQVLGQDKAHTLAGFSNTAIDRHMGIIGYSDLCQSAPPYLRMKALKVTAAKVVLAARTDAFGGDKSGDLGLKFRQDIEEKIEKWQEPTQGSRTKALPKPDPVTKKRRGGRRARAAKERFKITELAKEANRSTFGNMDTAEYGEDAMGLGFGQLGSKAGSGRLRAMKEVTKTSKLGMKRQ-RQAMGGQTPAPNAKKDRNSGISSSLVFTPVQGLELVDPTAEAKRRVEEANKKWFNASSGFLSAKPK 522
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A4D9DF62_9STRA (Nop domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DF62_9STRA) HSP 1 Score: 397 bits (1019), Expect = 1.460e-126 Identity = 245/499 (49.10%), Postives = 314/499 (62.93%), Query Frame = 1
Query: 307 ALGRIGDRTVGSVAKLRKSDRFKNQMAEIGECLKREPAPRVG-PLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEM----------------DMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQND---------PSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFA--SMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLK--VANLS-----------------SGQTNGLNSSLVFTPIQGLELVNPNA--EKDKKVMAANKKWFDSSSGFMSAKPK 1656
AL + +++ +VA L K+ R++ + + L E AP + PLE+DPEY+L+++SN L+QDID E++ VHRFVVD YSQKFPEL+SL+P DY+RTVQ + NEM D+T +DL LP +VMVVSVT S+TSG PL L+ECL GC E AL EA+ IL FVE RM+ +APN CAL+GS+I +QL+ GGL +S+ PA + Q MGQEKK+L G ++ + HAG+L C+VV APP LRQKAL+++A+KV+L +R D +Q + G GR RAE EDKI KWQE K KKALP P+ +KR GKRV K KEKFAMT++RKE R FA S EY D AMG+D GMLG ++ GR+R P KE +Q+V KK K +A +S SG TNG+ SSLVFTP QGLEL+NP A EK ++V ANK WFDSSSGFMSAKP+
Sbjct: 97 ALSKGTGQSLDAVATLSKTKRYRAHLERVTTGLALEEAPSMSLPLENDPEYQLILSSNRLVQDIDEEILNVHRFVVDVYSQKFPELESLLPNKLDYVRTVQRIGNEMVRPFSSSLPVAKSVFSDLTVIDLNDLLPTASVMVVSVTASSTSGRPLPPPLLQECLGGCAEVLALFEARTLILSFVERRMSVLAPNTCALIGSKIASQLMGLAGGLVALSRIPANHVQVMGQEKKSLQGLAAAQGIPHAGVLIGCEVVLGAPPALRQKALRLVASKVALTARMDAYQPEGEGGKEGGREKGAGGRALRAECEDKILKWQEPSKGKEKKALPVPEMSARKKRAGKRVTKAKEKFAMTELRKEYGRRQFAGASAGAEYGDEAMGMDTGMLG------------AVGGRLRIPGAKEQRQSVGKKKKAELAKMSGAGXXXXGGRVLSMGGSSGATNGMASSLVFTPTQGLELMNPIAAEEKRRRVEEANKSWFDSSSGFMSAKPR 583
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: F0WMW8_9STRA (U4/U6 small nuclear ribonucleoprotein Prp31 putativ n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMW8_9STRA) HSP 1 Score: 384 bits (986), Expect = 8.860e-123 Identity = 212/405 (52.35%), Postives = 281/405 (69.38%), Query Frame = 1
Query: 442 DDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQN--DPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQT--NGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMS 1644
D EY LVV SN+L+ ID E+ +HRF+V+ Y+ KFPELDSL+P DY R V+ + NE DMT VDL S LP TVM VSVTGSTTSG PLS + LE C++GC+E L + K IL+FVE+RM +APNV LVG+RI AQL+ GG+ +S+ P+CN Q +GQ+KK LSGFSS A + H G++FHCD++Q PPYLR KA + +A K++L +R D QN DP G++G ++ ++ K+EKWQE AK+KKALP PD+ P RKRGGKR RK KE+ MTDVRKE NR FA+ +EY D AMG+ G LG++G SG +R ++KE KQ ++KKLK A+ ++ + +GL+SSL FTP+QG+EL+NP A +V ANKK+F + SGF+S
Sbjct: 103 DSEEYHLVVTSNDLMVQIDDEIAAIHRFLVEMYAPKFPELDSLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLSPDTLEICIEGCRELFDLEKDKVMILEFVESRMRFLAPNVAQLVGTRIAAQLVGLAGGILELSRIPSCNLQVLGQQKKVLSGFSSAAALRHTGIIFHCDLIQNVPPYLRIKACRALAGKLALCARVDSEQNASDPDGQVGARFHQDLVMKMEKWQEPHKAKSKKALPVPDEKPRRKRGGKRYRKLKERLQMTDVRKELNRRSFATADEEYGDNAMGITAGRLGQEG-----------SGNLRI-LRKEQKQ-MAKKLKAASFAAAKQPLSGLSSSLAFTPVQGIELMNPEAAS-ARVREANKKYFSAESGFVS 493
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Match: A0A024GER9_9STRA (Nop domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GER9_9STRA) HSP 1 Score: 379 bits (972), Expect = 1.200e-120 Identity = 217/447 (48.55%), Postives = 294/447 (65.77%), Query Frame = 1
Query: 322 GDRTVGSVAKLRKSDRFKNQMAEIGECLK--REPAPRVGPLEDDPEYKLVVASNELIQDIDPEMVEVHRFVVDRYSQKFPELDSLIPQPADYIRTVQVMKNEMDMTHVDLESALPQTTVMVVSVTGSTTSGHPLSEEGLEECLKGCKEYEALVEAKAAILDFVETRMNSMAPNVCALVGSRITAQLLARTGGLRGMSKTPACNFQCMGQEKKTLSGFSSKATVAHAGLLFHCDVVQVAPPYLRQKALKVIAAKVSLASRSDCFQN--DPSGEIGRKWRAEVEDKIEKWQELQTAKTKKALPKPDDMPARKRGGKRVRKFKEKFAMTDVRKEANRMGFASMADEYSDTAMGLDFGMLGEKGRWALLNLSFSISGRVRAPMKKESKQNVSKKLKVANLSSGQT--NGLNSSLVFTPIQGLELVNPNAEKDKKVMAANKKWFDSSSGFMS 1644
G + +A L++S + N + I + +E + +D EY LVV SN+L+ ID E+ +HRF+++ Y+ KFPEL+SL+P DY R V+ + NE DMT VDL S LP TVM VSVTGSTTSG PL + LE C++ CKE L + K IL+FVE+RM +APNV LVG+RI AQL+ GG+ +++ P+CN Q +GQ+KK LSGFSS A + H G++FHCD++Q PPYLR KA + +A K +L +R D QN DP G++G + R ++ K+EKWQE AK+KKALP PD+ P RKRGGKR RK KE+ MTDVRKE NR FA+ +EY D AMGL G LG++G SG +R ++KE KQ +KKLK A+ ++ + +GL+SSL FTP+QG+EL+NP A +V ANKK+F + SGF+S
Sbjct: 64 GKPQLHKIATLKRSKTYLNHIQTIEKHFTDGKEQLQSLSMQKDSEEYDLVVTSNDLMVQIDDEIAAIHRFLIEMYAPKFPELESLVPNALDYARVVERIGNETDMTLVDLASLLPSATVMSVSVTGSTTSGKPLPPDALEICMEACKELFDLEKDKIMILEFVESRMRFLAPNVAQLVGTRIAAQLIGLAGGVLELARIPSCNLQVLGQQKKVLSGFSSAAALKHTGIIFHCDLIQNVPPYLRIKACRALAGKTALCARVDSDQNASDPDGQVGAQLRQDLIIKMEKWQEPHKAKSKKALPVPDEKPRRKRGGKRYRKLKERLQMTDVRKELNRRSFATADEEYGDNAMGLTAGRLGQEG-----------SGNLRI-LRKEQKQ-TAKKLKAASFAAAKQPLSGLSSSLAFTPVQGIELMNPEAAT-ARVREANKKYFSADSGFVS 496 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig109.1115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig109.1115.1 >prot_C-linearis_contig109.1115.1 ID=prot_C-linearis_contig109.1115.1|Name=mRNA_C-linearis_contig109.1115.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=553bp MATLADSFLDDLDELGESSDEETQEEGAGGDKSAGGGQGDGGEGGEDGMEback to top mRNA from alignment at C-linearis_contig109:274561..283759- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig109.1115.1 ID=mRNA_C-linearis_contig109.1115.1|Name=mRNA_C-linearis_contig109.1115.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9199bp|location=Sequence derived from alignment at C-linearis_contig109:274561..283759- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig109:274561..283759- >mRNA_C-linearis_contig109.1115.1 ID=mRNA_C-linearis_contig109.1115.1|Name=mRNA_C-linearis_contig109.1115.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3318bp|location=Sequence derived from alignment at C-linearis_contig109:274561..283759- (Chordaria linearis ClinC8C monoicous)back to top |