mRNA_C-linearis_contig108.1086.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: D7FZM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM1_ECTSI) HSP 1 Score: 457 bits (1175), Expect = 2.420e-146 Identity = 214/274 (78.10%), Postives = 234/274 (85.40%), Query Frame = 1
Query: 1027 GSPAPFAPSQCTNDIPGVSSGSVCCKESCGMCGGVGCGAVPGTNGASDCCPTTIIEEAGGAVCGEAPCVMEGFTPSPVNPATIGTAAPVEPSTCAGGIPGYQDGSVCCLESCGRCGGAGCGTIPGTGGSVNCCPSEILAAGNVCGEAPCIIDGYTPAPAVVGGGTTAPFGTNTCSNGMLGYQDGAVCCEANCGQCGADGCGSIPGTAGASACCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVPSTCSNGLPGYQSNEVCCLES 1848
G+ P APS C+N IPGVS G VCC E+CG CGG GCGA+ GTNGASDCCP TI EE+GG CGEAPCVM GFTPSP+NPA GTAAPV PSTC+ GI GYQDG++CCLE CGRCGG GCGTIPGTGGS NCCPS ILAAG VCGEAPCII+GYTPAPAVVGGGTTAP+GT+TCSNG+LGYQDG CC ANCGQCG GCGS+PGTAGASACCSS + + G LCS G SPC+IDNYTPAPVVPDYGSAAP VPS CSNGLPGYQ+N++CCLES
Sbjct: 282 GASDPVAPSTCSNGIPGVSDGDVCCLEACGQCGGEGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMAGFTPSPLNPAFDGTAAPVAPSTCSNGIAGYQDGAICCLEICGRCGGDGCGTIPGTGGSDNCCPSTILAAGVVCGEAPCIIEGYTPAPAVVGGGTTAPYGTSTCSNGILGYQDGPACCAANCGQCGGGGCGSVPGTAGASACCSSDVELAGNLCSATGVSPCVIDNYTPAPVVPDYGSAAPVVPSNCSNGLPGYQNNDICCLES 555
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: D7FJ68_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ68_ECTSI) HSP 1 Score: 338 bits (867), Expect = 1.370e-93 Identity = 226/694 (32.56%), Postives = 293/694 (42.22%), Query Frame = 1
Query: 1057 CTNDIPGVSSGSVCCKESCGMCGGVGCGAVPGTNGASDCCPTTIIEEAGGAVCG---EAPCVMEGFTPSPVNPATIGTAAPVEP-------------------------STCAGGIPGYQDGSVCCLESCGRCGGAGCGTIPGTGGSVNCCPSEILAAGNVCG---EAPCIIDGYTPAPAVVGGGTTAPFG------------------TNTCSNGMLGYQDGAVCCEANCGQCGADGCGSIPGTAGASACCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVPSTCSNGLPGYQSNEVCCLESCGSCGGPGCGTIPGTGGSAFCCPSAILAAGQVCGNGVVAPCIMDGFTPSPVNPALEGTASPVVPT-------------------------TCSNGLPGFQNGAACCKESCGQCGGAGCGIIPGTGGSESCCATDVLEMNNICGNGVEAPCVIENYTPAPMGVPGQLQPFA-----------------------------ASTCSNGLVGVQDENVCCAENCGQCGGVGCGTIPGTGGSEVCCSSTIAVNGTDCLATQEAPCIIGDWVPTPSPTVFVSAAPVPPS-------------------VCSNGLAGYQ--DDQVCCLLNCGQCGGTGCGAIN-GTAGASECCPTQILLNNQTCGGGVVAPCIIP---LTPSPTLAP 2754
C+N PG+ SG+ CC CG CGG C G GA +CC + I+E G +C EAPC ++ P+P +P C+ GIPG Q G CCL C CGG+GC G G+ NCC I G +C +APC++D PAP+ V T T+ CSNG G Q G CC A CG CG C G GA CC S I G+LCS+A E+PC ID TCSNG+PG Q+ CCL CG+CGG C G G+ CC S I+ G++C + APC +D +P+P +P E TA CSNG+PG Q+G +CC CG+CGG+ C G+++CC +++ E +C +EAPCV+++ PAP V P A TCSNG+ G+Q +N CC CG CGG C G G++ CC S I +G C EAPC I D P PSP +A CS G+ G + D VCC C CGG+GC + G CC + IL +C APC++ LTP+P P
Sbjct: 784 CSNGFPGIQSGNACCLAECGACGGSDCDEFGGGLGADNCCESDIVEH--GELCSIALEAPCYIDDAAPAP-SPVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDVCSNGIPGVQSGFACCLAECVACGGSGCDEFGGGLGADNCCEGNIEENGELCSITLQAPCVVDDSAPAPSPVAEPTAXXXXXXXXXXXXXXXXXXXXXXTDMCSNGFPGIQSGNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALEAPCYIDE-------------------TCSNGIPGIQTGNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGELCSIALAAPCYIDDSSPAP-SPVAEPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVCSNGIPGIQSGVSCCLAECGECGGSDCAEYGDGLGADNCCQSNIEEYGELCSIKLEAPCVVDDSAPAPSPV---TMPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDTCSNGIPGIQSDNACCLAECGACGGSDCDEFGGGLGADNCCVSDIVEHGEPCSIALEAPCYIDDSAPAPSPVAMPTAXXXXXXXXXXXXXXXXXXXXXXTEPTCSTGIPGIESSDGAVCCPTGCTMCGGSGCSTVGMPDYGPESCCSSDILSTGASCSETGEAPCVLADVVLTPAPVAEP 1451
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: A0A6H5JG29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG29_9PHAE) HSP 1 Score: 308 bits (790), Expect = 8.510e-84 Identity = 207/659 (31.41%), Postives = 266/659 (40.36%), Query Frame = 1
Query: 1087 GSVCCKESCGMCGGVGCGAVPGTNGASDCCPTTIIEEAGGAVCG---EAPCVMEGFTPSPVNPA-------------------------------------TIGTAAPVE-PSTCAGGIPGYQDGSVCCLESCGRCGGAGCGTIPGTGGSVNCCPSEILAAGNVCG---EAPCIIDGYTPAPAVVGGGTTAPFGTNTCSNGMLGYQDGAVCCEANCGQCGADGCGSIPGTAGASACCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVP-------------------------------STCSNGLPGYQSNEVCCLESCGSCGGPGCGTIPGTGGSAFCCPSAILAAGQVCGNGVVAPCIMDGFTPSPVNPALEGTASPVV-----------------PTT-CSNGLPGFQNGAACCKESCGQCGGAGCGIIPGTGGSESCCATDVLEMNNICGNGVEAPCVIENYTPAPM--------------------GVPGQLQPFAASTCSNGLVGVQDENVCCAENCGQCGGVGCGTIPGTGGSEVCCSSTIAVNGTDCLATQEAPCIIGDWVPTPSPTVFVSAAPVPPSVCSNGLAGYQDDQVCCLLNCGQCGGTGCGAINGTAGASECCPTQILLNNQTCGGGVVAPCII 2724
G+ CC CG CGG+ C A+ G GA +CC + I+E G +C EAPC ++G N +I AP C+ G PG Q G+ CCL CG CGG+ C + G G+ NCC S+I+ G +C EAPC ++ +TCSNG G Q G CC A CG CG C GA CC S I G+LCS+A E+PC +D TP P CSNG PG QS CCL CG CGG C G+ CC S I+ G++C + APC +D TP P PT CSNG+PG Q+G ACC CG CGG+ C G+E+CC +D+++ +C +EAPC ++ TP P TCSNG+ G+Q N CC CG CGG C G G++ CC S I +G C EAPC + D VCS+G+ G + CCL CG CGG+GC G GA CC I + + C + APC++
Sbjct: 253 GNACCLAECGGCGGLDCDALGGGLGAENCCESRIVEH--GELCSIALEAPCYIDGEMNGVGNACCLAECGXXXXXXXXXXXXXXXXXXXCESDIVERGEICSIALEAPCYLEDMCSNGFPGIQSGNACCLAECGGCGGSDCDALGGGLGAENCCESDIVERGELCSIALEAPCYLE-------------------DTCSNGFPGIQSGNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVEHGELCSIALEAPCYLDEPTPEPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGFPGIQSGNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTDLCSNGIPGIQSGNACCLAECGGCGGSDCDQFGDGLGAENCCESDIVDYGELCSIALEAPCYLDEPTPEPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTDTCSNGMPGIQSGNACCLAECGACGGSDCDAFGGGLGADNCCESDIVEHGELCSIALEAPCYLDD-------------------VCSDGIPGIRSGNACCLAECGACGGSGCDEFGGGLGADNCCEGNIEEHGELCSITLEAPCVV 871
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: A0A6H5JSA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSA0_9PHAE) HSP 1 Score: 232 bits (591), Expect = 4.560e-67 Identity = 108/138 (78.26%), Postives = 117/138 (84.78%), Query Frame = 1
Query: 1042 FAPSQCTNDIPGVSSGSVCCKESCGMCGGVGCGAVPGTNGASDCCPTTIIEEAGGAVCGEAPCVMEGFTPSPVNPATIGTAAPVEPSTCAGGIPGYQDGSVCCLESCGRCGGAGCGTIPGTGGSVNCCPSEILAAGNV 1455
+PS C+N IPGVS G VCC E+CG CGGVGCGA+ GTNGASDCCP TI EE+GG CGEAPCVMEGFTPSP+NPA GTAAPV PSTC+ GIPGYQDG +CCLE CGRCGG GCGTIPGTGGS NCCPS+ILAAG V
Sbjct: 1 MSPSTCSNGIPGVSDGEVCCLEACGQCGGVGCGAIAGTNGASDCCPDTIKEESGGVFCGEAPCVMEGFTPSPLNPALDGTAAPVAPSTCSNGIPGYQDGVICCLEICGRCGGDGCGTIPGTGGSDNCCPSDILAAGVV 138
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE) HSP 1 Score: 201 bits (511), Expect = 6.220e-52 Identity = 141/350 (40.29%), Postives = 180/350 (51.43%), Query Frame = 1
Query: 1516 GTTAPFGTNTCSNGMLGYQDGA--VCCEANCGQCGADGCGSIPGTAGASA-CCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVPSTCSNGLPGYQS--NEVCCLESCG-SCGGPGCGTIPGTGGSAFCCPSAILAAGQVCGNGVVAPCIMDGFTPSPVNPALEGTASPVVPTTCSNGLPGFQN--GAACCKESCGQCGGAGCGIIPGTGGSESCCATDVLEMNNICGNGVEAPCVIENYTPAPMGVPGQLQPFAASTCSNGLVGVQDENVCCAENC-GQCGGVGCGTIPGTGGSEVCCSSTIAVNGTDCLATQEAPCII--GDWVPTP--SPTVFVSAAP 2526
GT P G CSNG+ G Q + VCC C CG C ++ SA CC++ I G C V+ +PCII +AA S C NG G +VCC CG SCGG GCG+IPG + CC S I+ +G VC + V APC++ G A TTCSNG+ G ++ CC +CG CGG GCG + G G + CC+ ++ +N++C EAPCV++ F ASTC NGL GVQD +VCCAE C G CGG GCG+I GT G+E CCS+TI G DC APCI+ G + P +PT +AAP
Sbjct: 21 GTMTPAGA-VCSNGLEGIQSTSLDVCCVEGCEVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIIT------------TAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVN-ATQCCSSLIIESGAVCSDTVSAPCVV-------------GAAEADNSTTCSNGIVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLD-CCSEEIAVVNDLCSVTNEAPCVMDPPD------------FVASTCPNGLAGVQDGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCSNTILATGVDCEEGVMAPCIMLNGTYTDAPMAAPTFPPAAAP 330
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: D7FZM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM0_ECTSI) HSP 1 Score: 187 bits (475), Expect = 1.880e-51 Identity = 87/132 (65.91%), Postives = 103/132 (78.03%), Query Frame = 1
Query: 2533 PSVCSNGLAGYQDDQVCCLLNCGQCGGTGCGAINGTAGASECCPTQILLNNQTCGGGVVAPCIIPLTPSPTLAPGVTPFPTRTPFVAGNANDFINTTSSGDPGALRTPVGLLVPLATAAAAFLGAFALSAQH 2928
PS CSNGL GYQD Q CCL+NCG CGG GCG++NGTAGAS+CCP+ I+ + + CGG +VAPCIIP TP+PT AP +T PT PF+AGNANDFIN T++ DPG LR P L++PLATA AAFLGA A A H
Sbjct: 4 PSTCSNGLPGYQDGQACCLMNCGLCGGDGCGSVNGTAGASDCCPSTIINSARVCGGDIVAPCIIPATPAPTPAPALTLMPTPVPFLAGNANDFINDTNAADPGMLREPASLVLPLATATAAFLGALAFGAAH 135
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI) HSP 1 Score: 170 bits (430), Expect = 8.290e-42 Identity = 124/341 (36.36%), Postives = 165/341 (48.39%), Query Frame = 1
Query: 1534 GTNTCSNGMLGYQDGA--VCCEANCGQCGADGCGSIPGTAG---ASACCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVPSTCSNGLPGYQS--NEVCCLESCG-SCGGPGCGTIPGTGGSAFCCPSAILAAGQVCGNGVVAPCIMDGFTPSPVNPALEGTASPVVPTTCSNGLPGFQNGAA--CCKESCGQCGGAGCGIIPGTGGSESCCATDVLEMNNICGNGVEAPCVIENYTPAPMGVPGQLQPFAASTCSNGLVGVQDENVCCAENC-GQCGGVGCGTIPGTGGSEVCCSSTIAVNGTDCLATQEAPCIIGDWVPTPSPTVFVSAA 2523
G TC+ G+ G + + VCC CG CG GC P A+ CC++ I+ G +CS G +PCI+ + A S C NG G Q +VCC CG SCGG GCGTIPG S CC S I +G VCG+G+ APC A V + CSNG PG +N A CC +C CGG+ CG + G G++ CC ++ + +C APCV++ P ++ ASTC+NGL GV +VCCAE C G T G+E CCS+TI C+ T APC++ + TP+P V + A
Sbjct: 21 GAQTCAGGISGVESTSLDVCCTLECGTCGGVGC--TPANTSSLTANDCCATEISESGVMCSDTGVAPCILS------------TEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQ-CCASIIEQSGIVCGDGIEAPCTQ--------------VAVAVADSVCSNGFPGIENEDATVCCDPACVVCGGSTCGNVAGLTGAD-CCTGTIIANDELCSEKGSAPCVVD---------PPEV---TASTCANGLAGVSSGSVCCAEVCNGVXXXXXXXXXXXTNGAEDCCSATILAANIACVDT--APCVMVEGTFTPAPAVVPTVA 317
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE) HSP 1 Score: 159 bits (403), Expect = 4.550e-36 Identity = 131/456 (28.73%), Postives = 168/456 (36.84%), Query Frame = 1
Query: 1546 CSNGMLGYQ--DGAVCCEANCGQCGADGCGSIP-GTAGASACCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVP--------------------STCSNGLPGYQSNEVCCLESCGSCGGPGCGTIPGTGGSAFCCPSAILAAGQVCGNGVVAPCIMDGFTPSPVNPALEGTASPVVPTTCSNGLPGFQNGAACCKESCGQCGGAGCGIIPGTGGSESCCATDVLEMNNICGNGVEAPCVIENYTPAPMGVPGQLQPFAASTCSNGLVGVQ--DENVCCAENCGQCGGVGCGTIP-GTGGSEVCCSSTIAVNGTDCLATQEAPCIIGDWVPTPSPTVFVSAAPVPP-------------------------------------SVCSNGLAGYQDDQVCCLLNCGQCGGTGCGAINGTAGASECCPTQILLNNQTCGGGVVAPCII 2724
CS G+ G + DGAVCC NC QCG GC ++ GA +CC S + G CSV+ E+PC++D PA +P CSNG+PG QS + CCL CG+CGG GC G G CC I G++C + APC +D P+PV PAP +P CS G+ G++ D VCC C QCGG GC T+ G+E CC S + G C ++EAPC++ D PTP P +AAP VCSNG+ G Q CCL CG+CGG GC G G CC +I + C + APCI+
Sbjct: 344 CSTGIPGIESSDGAVCCPINCTQCGGAGCATVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVLD--APATEMPAMAPTPEXXXXXXXXXXXXXXXXXXXXXXGDVCSNGIPGIQSGDSCCLAECGACGGSGCAEFGGGLGEDNCCAVRIEEYGELCSVALAAPCYVDAPPPTPVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPPAPSEMPVMAPTDEVVVCSTGIRGIESSDGAVCCPLGCTQCGGEGCSTVGLPEYGAESCCQSDVLSAGVSCSVSEEAPCVL-DETPTPEP----NAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGDVCSNGIPGIQSGITCCLAECGECGGPGCAEFGGGLGQDNCCQGRIEEYGELCSVTLAAPCIV 790
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: D7FJ69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ69_ECTSI) HSP 1 Score: 130 bits (328), Expect = 4.680e-31 Identity = 76/174 (43.68%), Postives = 87/174 (50.00%), Query Frame = 1
Query: 2215 APCVIENYTPAPMGVPGQLQPFAAST--CSNGLVGVQDENVCCAENCGQCGGVGCGTIPGTGGSEVCCSSTIAVNGTDCLATQEAPCIIGDWVPTPSPTVFVSAAPV--PPSVCSNGLAGYQDDQVCCLLNCGQCGGTGCGAINGTAGASECCPTQILLNNQTCGGGVVAPCII 2724
APCV+ Y PAP V + P T CSNG+ GVQ CC CG CGG GC + G G CC I G C EAPC++ P PSP V APV P VCSNG G Q CCL CG+CGG GCG G GA +CC + I + C + APC I
Sbjct: 8 APCVL-GYAPAPTPVAEPVAPVTEPTDVCSNGIPGVQSGVSCCLAECGGCGGSGCAELGGGLGEHNCCEGEIEEFGELCSIKLEAPCVVDASAPAPSP-VAEPVAPVTEPTDVCSNGFPGIQSGVSCCLAECGECGGRGCGEFGGGLGADKCCESDIEEYGELCSIALAAPCYI 179
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Match: A0A6H5JJ70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ70_9PHAE) HSP 1 Score: 132 bits (332), Expect = 5.950e-29 Identity = 119/417 (28.54%), Postives = 158/417 (37.89%), Query Frame = 1
Query: 1306 CAGGIPGYQDGS--VCCLESCGRCGGAGCGTIPGTGGSVNCCPSEILAAGNVCGE----APCIID-GYTPAPAVVGGGTTAP---------------------FGTNTCSNGMLGYQDGAVCCEANCGQCGADGCGSIPGTAGASACCSSTIAVEGQLCSVAGESPCIIDNYTPAPVVPDYGSAAPFVPSTCSNGLPGYQSNEVCCLESCGSCGGPGCGTIPGTGGSAFCCPSAILAAGQVCGNGVV-APCIMDGFTPSPVNPALEG----------------------------------------TASPV------VPTT----------------------------------CSNGLPGFQNGAACCKESCGQCGGAGCGIIPGTGGSESCCATDVLEMNNICGNGVEAPCVI 2229
C G+ G + VCC+ +CG CGG+GC + GT G +CC +IL + CG APCI+D P+ T AP T + G ++ + + P A ++TP V P G++ S C NG PG+QSNE CC E CG CGG GCG + GSA CC I++AG VCG V+ APCI+ +TP+P+ + T SPV VPT C +G+ GF++G ACC SCGQCGGAGC + G G+ CC+ DVL NN+C APCV+
Sbjct: 7 CVAGVEGILSSNEEVCCIAACGMCGGSGCSDVEGTDGGSDCCVDDILDSDVTCGVDDGVAPCIVDPDIITTPSATEAATPAPAXXXXXXXXXXXXXXXXXXXXXXXTTTAPGQXXXXXXXXIAPSSTSPTESLTATAQPAAAPVVVAAPXXXXXXXXXXXXXXXXXXXAGSFTP--VAPVAGAS-----SYCENGYPGWQSNEACCSEFCGQCGGSGCGEL----GSATCCYDNIISAGLVCGVDVLEAPCIIINYTPAPLAEGVTAPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVATESPVSRGDVGVPTPSPGGSEAPQESVPPSVTPPVGGAVGTTPAPSAPECDDGIEGFRHGVACCSVSCGQCGGAGCENLEG--GASECCSHDVLATNNLCSESGVAPCVL 410 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig108.1086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig108.1086.1 >prot_C-linearis_contig108.1086.1 ID=prot_C-linearis_contig108.1086.1|Name=mRNA_C-linearis_contig108.1086.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=892bp MAGKEQRRSRSCGKKARRCTVGLVLVSVVQLLATTAASQHVSGEQIAVERback to top mRNA from alignment at C-linearis_contig108:524601..543448- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig108.1086.1 ID=mRNA_C-linearis_contig108.1086.1|Name=mRNA_C-linearis_contig108.1086.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18848bp|location=Sequence derived from alignment at C-linearis_contig108:524601..543448- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig108:524601..543448- >mRNA_C-linearis_contig108.1086.1 ID=mRNA_C-linearis_contig108.1086.1|Name=mRNA_C-linearis_contig108.1086.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5352bp|location=Sequence derived from alignment at C-linearis_contig108:524601..543448- (Chordaria linearis ClinC8C monoicous)back to top |