mRNA_C-linearis_contig107.1043.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig107.1043.1
Unique NamemRNA_C-linearis_contig107.1043.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 467 bits (1202), Expect = 2.970e-162
Identity = 226/317 (71.29%), Postives = 255/317 (80.44%), Query Frame = 1
Query:  151 QILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTYQADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGVL--SKEGG------GGSEKMDRHPAHAKLKRELIE 1077
            Q+LG+GNCFDD+ QLS MSKSMA  TFH FC+HFA EMF+EHIYLPTGTY  +VM ++ +LG TGA GSTDVTHIGW MCPFTLGRS+TGKEGFPTIAY VTVDH GR +A+T GFTG+TNDKTIIRYD+GVN I+T  QY +  YKLRKA+GT R R+GC+LIVDNGYHEWVTLIAPSKYP  NEDTAFSR LESVRKDV CF        RILKLR+ YH ++ +DNIFFTCCILHNMLHTFDG+DVFEEN DW GSAG HD W  DPLTD+ SVGS GVL   KEG       GG  + +RHP HA+LKR+LIE
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIE 350          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 449 bits (1155), Expect = 2.050e-153
Identity = 206/329 (62.61%), Postives = 251/329 (76.29%), Query Frame = 1
Query:    7 FRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTYQADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTG 993
            FR  FR+P+PFF+ELV L K + WF  G +DA GR GIP +LKVL  LQIL RGNCF DI  +S +S   AAATFH F ++FA+EM+ EHI+LPTG YQ  VM  YD+LG +GA GSTDVTHI WGMCP+   RSYTGKEG+PT+AYQVTVDH  RV+A+T GFTGSTNDK+IIRYD  V  I+ +  Y +  + + +ADGT  + KGCYL+VDNGYH+WVTLI PSKYP +  D AFS+ LESVRKDVECFFGI+KGRFRILKL + YH ++DIDN+FFTCCILHNMLH++D     EE  +W G+AGLH+ W  +P  D +SVG+ G
Sbjct:  116 FRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKG 444          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 430 bits (1105), Expect = 9.790e-144
Identity = 252/523 (48.18%), Postives = 292/523 (55.83%), Query Frame = 1
Query:    4 VFRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTAL-----QILGRGN----------CFDDILQL---------------------------SLMSKSMAAATF---------------------------------HNFCKHFAQEMFEEHIYLPTGTYQADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNG----------YHE---------------WVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSK-------------------------------KD--------------------------IDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGVL--SKEGG------GGSEKMDRHPAHAKLKRELIE 1077
            VFR RFRVP+PFF  LVKL++ K+WFS G KD   R GIP ELK+ T+      Q+ G  N           FD+ + L                           + +  +M   T                                  H FC+HFA EMF+EHIYL TGTY  +VM ++ +LG TGA GST+VTHIGW MCPFTLGRS+TGKEGFPTIA +VTVDHAGR +A+T GFTG+TNDKTIIRYD+GVN I+TE QY +  YKLRKA+GT R R+GC+LIVDNG          +H+               WVTLIAPSKYP +NEDTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH +                               KD                          IDNIFFTCCILHNMLHTFDG+DVFEEN DW GSAG HD W  DPLTD+ SVGS GVL   KEG       GG  + +RHP HA+ KR LIE
Sbjct:   95 VFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELKLRTSTPVEDEQVDGTSNHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIE 617          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 1.480e-143
Identity = 205/293 (69.97%), Postives = 234/293 (79.86%), Query Frame = 1
Query:    1 KVFRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTYQADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHT 879
            KVFR RFRVP+PFF ELVKL++ K+WFS G KDA  R GIP ELKVL      G+GNCFDD+ QLS MS+S+A A FH FC+H A EMF+EHIYLPTGTY  +VM ++ +LG TGA GSTDVTHIG  MCPFTLGRS+TGKEGFPTIAY+VTVDHAGR +A+T GF G TNDKT IRYD+GVN I+TE QY +  YKLRK +GT R R+GC+LIVDNGY+E            +NEDTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH ++ IDNIFFTCCILHNMLHT
Sbjct:   94 KVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 3.840e-142
Identity = 195/327 (59.63%), Postives = 239/327 (73.09%), Query Frame = 1
Query:    7 FRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTYQADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGS 987
            FR  FRVP+PFF+ LV+L + + WF  G  D  GR  +P ELKVL  LQIL RGN F DI  +S +S    A+TFH FCK+FA E+++E++YLPTG     VM  YD++G  GA+GSTDVTHI WGMCP+   R YTGKEG PT+A+QVTVDH+GRV+A+T GFTG+TNDKTIIRYD  V  I+T+  Y +  YKL   DG   E KGCYL+VDNGYH+W TLI PSK P +  D  FS+ LES RKDVEC+FGILKGRFRI KL +G+H ++ IDN+FFTCCILHNMLH+FD      E  +W GSAGLH+   +DP TD++SVGS
Sbjct:  132 FRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGS 458          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.560e-133
Identity = 194/337 (57.57%), Postives = 230/337 (68.25%), Query Frame = 1
Query:    1 KVFRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTY-QAD-VMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGVLSK 1005
            K FR  FRVP  FFL LV L K K WF+  G DA  R   P E KVL  L ILGRGNCF  I Q+S MS       FH FCKHFA+EM++EHIYLP+    + D VM  YD+LG +GA+GS DVTHIGW  CP+ L RSYTGKEG PT+ YQVTV+HAGR IA+T GFT STNDKT + +DA V  I+T+ QY + T+ +   DGT    KGCYL+VDNGYH+W  L+ P+KYP +  D  FS+ LESVRKDVECFFGILKG FRI K+ + YH ++ IDN+FFTCCILHNMLHTFDGMD   EN  WV SAG       +   D ++VG+     K
Sbjct:   54 KQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAGAGTGVATEQEADSSTVGAKDTNDK 390          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 397 bits (1020), Expect = 2.370e-133
Identity = 205/359 (57.10%), Postives = 246/359 (68.52%), Query Frame = 1
Query:    1 KVFRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTY-QAD-VMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGVLSKEGGGGSEKMDRHPAHAKLKREL 1071
            K FR  FRVP+PFFL LV+L K K WF+   +DA GR   P E KVL  L ILGRGN F  I  LS MS       FH FC+HFA EM++EHI+LP+    + D VM  Y+KLG  GA+GSTDVTHIGW  CP+  GRSYTGKEG PT+ YQVTV+HAGRV+A+T GFTGSTNDKTII  D  V+ I+T+ QY +  + + K DGT    KGCYLIVDNGYH+W  LI PSKYP +  D  FS+ LESVRKDVECFFGILK RFRILKL + Y  ++ +D +FFTCCILHNMLHT DGM   EE+V+WVGSA L +        D +SVG+  +        ++K     AHA+LKR+L
Sbjct:   83 KKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN--TSGHNLDSSSVGTKDL--------NDKPQVEAAHAELKRKL 431          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 390 bits (1001), Expect = 5.100e-131
Identity = 200/344 (58.14%), Postives = 236/344 (68.60%), Query Frame = 1
Query:   70 KKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTYQADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGVL--------SKEGGGGSEKMDRHPAHAKLKRELIE 1077
            K W S  G+    R G   +L VL      G+GNCFDD+ QLS MS SMA ATFH FC+HFA EMF+EHI+ PT TY  + M ++ +LG TGA  STDVTHI   MCPFTLGRS+TGKEGFPTIAY+VTVDHA R +A+T GFTG+ NDKT+I YD+GVN I+TE QY +  YKLRKA+GT R R+GC+ IVDNGYHE                            DVECFFGILKGRFRILKLR+ YH ++ IDNIFFTCCI HNMLHTFDG+D+FEEN DW GSAG HD W +DPL D+ SVGS GVL         + G GG  + +R   HA+LK++LIE
Sbjct:   82 KNWSSWQGRSGGFRRGRRMQLTVL------GKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE----------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHDAWERDPLMDYTSVGSKGVLLPPKDGEKEERGEGGHVRKERQD-HAELKKQLIE 390          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.660e-129
Identity = 200/362 (55.25%), Postives = 232/362 (64.09%), Query Frame = 1
Query:    1 KVFRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTALQILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTG-TYQAD-VMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYK----------------------------DCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGV 996
            K  R  FRVP+  FL LV L K K WFS    DAVG +  P E KVL  L ILGRGNCF  I Q+S MS       FH FC+HFA+EM++E I+LPT  + + D VM  YD+LG TGA+GS DVTHI W  CP+   RSYTGKEGFPTIAYQVTVDHAGR IA+T GFTGSTNDKTI+ +D  V  I T+  Y                             + T+ +   DGT    KGCYL+VDNGYH+W  LI PSKYP +  D  FS+ LESVRKDVECFFGILKGRFRILKL + Y S++ IDN+FFTC ILHNMLHTFDGMD   EN +WV SAG+      +P  D  SVG+  V
Sbjct:   41 KQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGVGATLTTEPEADCGSVGTKDV 402          
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 1.150e-125
Identity = 176/239 (73.64%), Postives = 200/239 (83.68%), Query Frame = 1
Query:  385 MCPFTLGRSYTGKEGFPTIAYQVTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRKADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKDVECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVFEENVDWVGSAGLHDPWVQDPLTDFASVGSTGVL--SKEGG------GGSEKMDRHPAHAKLKRELIE 1077
            MCPFTLGRS+TGKEGFPTIAY+VTVDH GR +A+T GFTG+TNDKTIIRYD+GVN I+TE QY +  YKLRK +GT R R+GC+LI+DN YHEWVTLIAPSKYP +N+DTAFSR LESVRKDVECFFGILKGRFRILKLR+ YH ++ IDNIFFTCCILHNMLHTFDG+DVF+EN DW GSAG HD W  DPLTD+ SVGS GVL   KEG       GG  + +RHP HA+LKR+LIE
Sbjct:    1 MCPFTLGRSFTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIE 239          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1043.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE2.970e-16271.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE2.050e-15362.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE9.790e-14448.18DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KSI7_9PHAE1.480e-14369.97DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JPH7_9PHAE3.840e-14259.63Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE1.560e-13357.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE2.370e-13357.10Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE5.100e-13158.14DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNX4_9PHAE1.660e-12955.25DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JQM6_9PHAE1.150e-12573.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:371097..373466 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.2
Seed ortholog evalue1.9e-83
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size1077
Cds size1077
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1043.1prot_C-linearis_contig107.1043.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig107 371097..373466 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927409.3225982-CDS-C-linearis_contig107:371096..3715101622927409.3225982-CDS-C-linearis_contig107:371096..371510Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 371097..371510 -
1690879684.7946005-CDS-C-linearis_contig107:371096..3715101690879684.7946005-CDS-C-linearis_contig107:371096..371510Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 371097..371510 -
1622927409.3331435-CDS-C-linearis_contig107:371947..3724751622927409.3331435-CDS-C-linearis_contig107:371947..372475Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 371948..372475 -
1690879684.8061676-CDS-C-linearis_contig107:371947..3724751690879684.8061676-CDS-C-linearis_contig107:371947..372475Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 371948..372475 -
1622927409.3440473-CDS-C-linearis_contig107:373331..3734661622927409.3440473-CDS-C-linearis_contig107:373331..373466Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 373332..373466 -
1690879684.817794-CDS-C-linearis_contig107:373331..3734661690879684.817794-CDS-C-linearis_contig107:373331..373466Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 373332..373466 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig107.1043.1

>prot_C-linearis_contig107.1043.1 ID=prot_C-linearis_contig107.1043.1|Name=mRNA_C-linearis_contig107.1043.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=359bp
KVFRTRFRVPHPFFLELVKLAKGKKWFSEGGKDAVGRSGIPTELKVLTAL
QILGRGNCFDDILQLSLMSKSMAAATFHNFCKHFAQEMFEEHIYLPTGTY
QADVMNMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQ
VTVDHAGRVIALTAGFTGSTNDKTIIRYDAGVNAIKTEGQYKDCTYKLRK
ADGTFRERKGCYLIVDNGYHEWVTLIAPSKYPANNEDTAFSRTLESVRKD
VECFFGILKGRFRILKLRLGYHSKKDIDNIFFTCCILHNMLHTFDGMDVF
EENVDWVGSAGLHDPWVQDPLTDFASVGSTGVLSKEGGGGSEKMDRHPAH
AKLKRELIE
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mRNA from alignment at C-linearis_contig107:371097..373466-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig107.1043.1 ID=mRNA_C-linearis_contig107.1043.1|Name=mRNA_C-linearis_contig107.1043.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2370bp|location=Sequence derived from alignment at C-linearis_contig107:371097..373466- (Chordaria linearis ClinC8C monoicous)
AAGGTCTTCCGCACTCGCTTTCGCGTACCTCACCCCTTCTTTCTGGAGCT GGTCAAGTTGGCCAAGGGGAAGAAGTGGTTCTCTGAGGGAGGAAAGGATG CTGTCGGGCGCTCCGGGATACCGACTGAACTCAAGGTGAGCTACACGGCT GCTGCTGAATGGCCGCAGTCCTCCTGTGTAAACTACAATGTGCAATATTT GTTGGTGATGACCACCACAAACAGGCTGCTCCGTTCTCCAGACACATGAG AAGTTCTTGCCCTCCGTTGCCACCCGACGTCTCTGCTATTCCCCAAGCAA ACCCTTTGTTGAACTGTGATCCAAAGCACCGACGACTCTCTTTCTCCTGG CCATTCTGGCTCTATCGCACAAGAACTGCGAGATACGTTTGGTGTGGTGT ACGCTCGTGTTCCAATGCGGTCGTGTGCGATGTCTCCGCCTGGATAGACT ATATGCGAAGCACAGCAAGAACACAAGCGTTGCCTCTGCTGCATTACTCT GAGTCTGGTACAACACAGAGGCTGGTAGATTAAGAGTGCTTTGCCGAACA CTCAGCCAGTTCGTCAGACCGTAGTTTTTGATTTGTATTCACAGCAGCAG GCTGACCTGGAAGCAGCACTGTAATCCGTTAGCAAGGCGGCAGGTGCCTT ACACCCCACGCGCAGGTCGCATCGCTGCGAAGCAAGACTCTTGCAGTAAA ATCGCACATCGTTGGGATAGACACGTCGGGACTACAAGTAGCCGCCAAAG TTGTGCTTTCTGGTTCTGCTACAAATGTGACACACTATTGAATGCACCAG CCCGGTGCTCGGCAAACCACGCCCTCCCTGTCAACTGCGGAGTGTAGTTA TTATATAAACATCGCTGACCACGTTTTAATGTGGCCGATGCTATAGATCG TGACGCCGACTCTGCTTAAACAACGATTAATTTAGTACACCGTGGCCAAT GGTTCCTTTCGCACATGCCTTCTCCCCACACTCTCCTGCAGGTATTGACG GCCCTCCAGATACTGGGCAGGGGCAACTGCTTCGACGACATCTTGCAGCT GTCGCTGATGAGCAAGTCCATGGCAGCCGCTACGTTCCACAACTTCTGCA AGCATTTTGCGCAGGAAATGTTCGAGGAGCACATCTACCTCCCTACCGGA ACGTACCAGGCGGACGTCATGAACATGTACGACAAGCTCGGCATGACGGG GGCCATCGGATCTACCGACGTGACCCACATCGGGTGGGGCATGTGCCCTT TCACCCTTGGCCGTTCTTACACGGGCAAGGAAGGATTCCCGACCATCGCC TACCAAGTGACAGTCGACCACGCAGGCCGAGTCATCGCGCTCACCGCCGG TTTCACCGGCTCGACCAATGACAAGACCATCATCCGCTACGACGCCGGTG TGAACGCCATCAAGACGGAAGGCCAGTACAAGGACTGCACGTACAAGCTC CGGAAGGCGGATGGGACTTTCCGTGAGCGCAAGGGGTGCTACCTGATCGT CGACAACGGGTACCACGAGGTAAATGCAGTTGGGCGCCCTTCGAGAAAGA GAGAGGCGATAGCCACGACGTTGAACATTTGAGGTACAGCAGTAACCGTA AACATACCCCATAACGTAACCCCAAGTGTTATCTCTGTCGACGGTTATTG AAAAAGCTGGGTCGGTGCGTCGGGCGCGCGGTAGAACTCTTTGCTGGCGT GTGTTCGGTACGTTTGTTCAACGTTTGGATGCAGATATGTAGCAAGTGTT CACAGGAAGCCACTGGTCGGCCATAGATTAGGCGGAAAGCTCGTAGCCAA TGGCGACCTCCTCCGGGTGCGAGGTTGCGGTTGGATAATGTTATATCCGT GTGATTTTATTTTGTCAACCAAAGTCCGGAGCACGCAAGACCCGCCCTCT ATTTACCCCCCACCATGTCGTTCGAAACCTCAACCGCTTTTTGCCCTCCC AAACAGTGGGTGACCCTCATTGCTCCCTCCAAGTACCCGGCGAACAACGA GGACACCGCTTTCTCCAGGACGCTCGAGAGCGTGCGCAAGGATGTCGAGT GCTTCTTCGGTATCTTGAAGGGACGTTTCAGAATCCTCAAGCTCCGTCTA GGGTACCACTCGAAAAAAGATATCGACAACATCTTCTTCACTTGCTGCAT CCTGCACAACATGCTTCACACCTTCGACGGCATGGACGTGTTCGAGGAAA ACGTCGACTGGGTCGGGAGCGCTGGTCTGCACGACCCCTGGGTCCAGGAC CCGCTGACCGACTTCGCGTCTGTCGGATCGACGGGGGTGCTTTCGAAGGA GGGGGGGGGAGGCAGCGAGAAGATGGACAGGCACCCAGCCCACGCGAAGC TTAAACGGGAGCTGATCGAG
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Coding sequence (CDS) from alignment at C-linearis_contig107:371097..373466-

>mRNA_C-linearis_contig107.1043.1 ID=mRNA_C-linearis_contig107.1043.1|Name=mRNA_C-linearis_contig107.1043.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at C-linearis_contig107:371097..373466- (Chordaria linearis ClinC8C monoicous)
AAGGTCTTCCGCACTCGCTTTCGCGTACCTCACCCCTTCTTTCTGGAGCT
GGTCAAGTTGGCCAAGGGGAAGAAGTGGTTCTCTGAGGGAGGAAAGGATG
CTGTCGGGCGCTCCGGGATACCGACTGAACTCAAGAAGGTCTTCCGCACT
CGCTTTCGCGTACCTCACCCCTTCTTTCTGGAGCTGGTCAAGTTGGCCAA
GGGGAAGAAGTGGTTCTCTGAGGGAGGAAAGGATGCTGTCGGGCGCTCCG
GGATACCGACTGAACTCAAGGTATTGACGGCCCTCCAGATACTGGGCAGG
GGCAACTGCTTCGACGACATCTTGCAGCTGTCGCTGATGAGCAAGTCCAT
GGCAGCCGCTACGTTCCACAACTTCTGCAAGCATTTTGCGCAGGAAATGT
TCGAGGAGCACATCTACCTCCCTACCGGAACGTACCAGGCGGACGTCATG
AACATGTACGACAAGCTCGGCATGACGGGGGCCATCGGATCTACCGACGT
GACCCACATCGGGTGGGGCATGTGCCCTTTCACCCTTGGCCGTTCTTACA
CGGGCAAGGAAGGATTCCCGACCATCGCCTACCAAGTGACAGTCGACCAC
GCAGGCCGAGTCATCGCGCTCACCGCCGGTTTCACCGGCTCGACCAATGA
CAAGACCATCATCCGCTACGACGCCGGTGTGAACGCCATCAAGACGGAAG
GCCAGTACAAGGACTGCACGTACAAGCTCCGGAAGGCGGATGGGACTTTC
CGTGAGCGCAAGGGGTGCTACCTGATCGTCGACAACGGGTACCACGAGGT
ATTGACGGCCCTCCAGATACTGGGCAGGGGCAACTGCTTCGACGACATCT
TGCAGCTGTCGCTGATGAGCAAGTCCATGGCAGCCGCTACGTTCCACAAC
TTCTGCAAGCATTTTGCGCAGGAAATGTTCGAGGAGCACATCTACCTCCC
TACCGGAACGTACCAGGCGGACGTCATGAACATGTACGACAAGCTCGGCA
TGACGGGGGCCATCGGATCTACCGACGTGACCCACATCGGGTGGGGCATG
TGCCCTTTCACCCTTGGCCGTTCTTACACGGGCAAGGAAGGATTCCCGAC
CATCGCCTACCAAGTGACAGTCGACCACGCAGGCCGAGTCATCGCGCTCA
CCGCCGGTTTCACCGGCTCGACCAATGACAAGACCATCATCCGCTACGAC
GCCGGTGTGAACGCCATCAAGACGGAAGGCCAGTACAAGGACTGCACGTA
CAAGCTCCGGAAGGCGGATGGGACTTTCCGTGAGCGCAAGGGGTGCTACC
TGATCGTCGACAACGGGTACCACGAGTGGGTGACCCTCATTGCTCCCTCC
AAGTACCCGGCGAACAACGAGGACACCGCTTTCTCCAGGACGCTCGAGAG
CGTGCGCAAGGATGTCGAGTGCTTCTTCGGTATCTTGAAGGGACGTTTCA
GAATCCTCAAGCTCCGTCTAGGGTACCACTCGAAAAAAGATATCGACAAC
ATCTTCTTCACTTGCTGCATCCTGCACAACATGCTTCACACCTTCGACGG
CATGGACGTGTTCGAGGAAAACGTCGACTGGGTCGGGAGCGCTGGTCTGC
ACGACCCCTGGGTCCAGGACCCGCTGACCGACTTCGCGTCTGTCGGATCG
ACGGGGGTGCTTTCGAAGGAGGGGGGGGGAGGCAGCGAGAAGATGGACAG
GCACCCAGCCCACGCGAAGCTTAAACGGGAGCTGATCGAGTGGGTGACCC
TCATTGCTCCCTCCAAGTACCCGGCGAACAACGAGGACACCGCTTTCTCC
AGGACGCTCGAGAGCGTGCGCAAGGATGTCGAGTGCTTCTTCGGTATCTT
GAAGGGACGTTTCAGAATCCTCAAGCTCCGTCTAGGGTACCACTCGAAAA
AAGATATCGACAACATCTTCTTCACTTGCTGCATCCTGCACAACATGCTT
CACACCTTCGACGGCATGGACGTGTTCGAGGAAAACGTCGACTGGGTCGG
GAGCGCTGGTCTGCACGACCCCTGGGTCCAGGACCCGCTGACCGACTTCG
CGTCTGTCGGATCGACGGGGGTGCTTTCGAAGGAGGGGGGGGGAGGCAGC
GAGAAGATGGACAGGCACCCAGCCCACGCGAAGCTTAAACGGGAGCTGAT
CGAG
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