mRNA_C-linearis_contig107.1025.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig107.1025.1
Unique NamemRNA_C-linearis_contig107.1025.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: D7FMZ3_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMZ3_ECTSI)

HSP 1 Score: 1150 bits (2975), Expect = 0.000e+0
Identity = 583/658 (88.60%), Postives = 600/658 (91.19%), Query Frame = 3
Query:  225 NFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHA--------------------------------------------DEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEEKFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            NFPR+RAALSLLSYCYYQMQDYKAATTMYEQLVK+CPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDS QYQQRM+ALQG IKYEQDELAACK LVDQCL DDPDTIISYASISFKEQDY+DAR KYADAMHTLGYQADLAYNTALCYFKDKQY  ALK                                              DEIIE+GVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIE TRK+YEMA EALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDAR+ARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYP+VEKLFRQAAEFCSDHDTWKLNAAHVFFMEEKFKEAIRYY+PIVKKQA++ILEVPAIVLANLCVSHIMISQN+EAEELMRKIEKEEEKVA+QDP+KQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKH L+LKDASLYEII FLDAADQHGH+IPTQIGPQVDPGGKHTP KWNCTVSYETRQLKKI+LKLRD
Sbjct:   42 NFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQGAIKYEQDELAACKGLVDQCLGDDPDTIISYASISFKEQDYEDARQKYADAMHTLGYQADLAYNTALCYFKDKQYVSALKRVGELSYTLVVLGELSIDYISGRKQRSFVSDKRKLMVSCLPRALWPDEIIERGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEQTRKDYEMAVEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARIARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPIVEKLFRQAAEFCSDHDTWKLNAAHVFFMEEKFKEAIRYYQPIVKKQAESILEVPAIVLANLCVSHIMISQNDEAEELMRKIEKEEEKVAEQDPEKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHMLILKDASLYEIIGFLDAADQHGHNIPTQIGPQVDPGGKHTPDKWNCTVSYETRQLKKIFLKLRD 699          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A7S2B7F7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7F7_9STRA)

HSP 1 Score: 952 bits (2460), Expect = 0.000e+0
Identity = 479/654 (73.24%), Postives = 552/654 (84.40%), Query Frame = 3
Query:  114 LSGKTRYSSMSTTAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHT--PTKWNCTVSYETRQLKKIYLKLRD 2066
            +SG         T  VY +IKDGR+ +AV +L  E  NFPR RAALSLL YCY+ M D+ AA  MYE+LVK+CP V+EYK+Y AQ+LYKAG+YPEATRAAVRVD+ QY QRM+ LQ  IKYEQDELAACK+L+DQCL DDPDTII++A+I FK+  +++AR KY +AM+TLGYQADLA N ALCY+K KQ+GPALKH  EIIEKGVREHPELSVGSNTDGIDVRSVGNS VLQ+TCL+EAFNL+AAIE+   N+E + EALSDMPPRRE ELD VTLHNQAL+ ME+DP  GF KLNFLLSNPPFPPETFGNLLLLHCKYGY++LAADILAEN+HLTYKFL ++L+EYLDA IMVQTSPEEAYRKYD+LT+KHI+ LR LTK IQDAR+ R+   IK  L+ YD ALE+YIPVLMA ARIYWDRENYPMVE+LFRQ+AEFCS+H+ WKLN AHVFFM+E KFKEAIRYY+PIVKK ++ IL+V AIVLANLCVS+IM SQNE+AEELMRKIEKEEE++   +PDKQC+HLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPY+KKLGTDTW+YAKRCFLALAE MSKHTL LKDASL+EII+FLDAAD+HG +I T I   V   G     P +    VSYE RQLKK+YLKL +
Sbjct:    1 MSGVRAVPDGQYTTTVYSSIKDGRYADAVQVLEFERQNFPRARAALSLLGYCYFMMSDFLAAAKMYEELVKICPDVDEYKMYYAQALYKAGLYPEATRAAVRVDNPQYSQRMLMLQSAIKYEQDELAACKALLDQCLPDDPDTIINHAAILFKDGKFEEARTKYVEAMNTLGYQADLACNVALCYYKLKQHGPALKHIAEIIEKGVREHPELSVGSNTDGIDVRSVGNSLVLQDTCLIEAFNLKAAIEYNMLNHEASKEALSDMPPRREHELDAVTLHNQALIGMEEDPNNGFHKLNFLLSNPPFPPETFGNLLLLHCKYGYYDLAADILAENAHLTYKFLPQDLFEYLDATIMVQTSPEEAYRKYDDLTTKHIETLRGLTKLIQDARIGRETAEIKERLKEYDDALEKYIPVLMAQARIYWDRENYPMVERLFRQSAEFCSEHEVWKLNVAHVFFMQESKFKEAIRYYDPIVKKNSEAILDVTAIVLANLCVSYIMTSQNEDAEELMRKIEKEEERLTFSEPDKQCYHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYDKKLGTDTWYYAKRCFLALAENMSKHTLTLKDASLHEIISFLDAADEHGGNIKTVIAQAVTIEGVDGKGPDEATNNVSYEARQLKKLYLKLAE 654          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A7S2RJ83_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ83_9STRA)

HSP 1 Score: 931 bits (2407), Expect = 0.000e+0
Identity = 459/640 (71.72%), Postives = 550/640 (85.94%), Query Frame = 3
Query:  150 TAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            T  +Y AI+DGR+ +AV +L  E  NFPR+RAALSLL +CY+ M D+  A  MYE+L+KVCP VEEYK+Y AQSLYKAG+YPEATRA++RVDS QY QR+  L+  +KY+ DEL ACKSL+D CL DDP+TII+ A+I FK++ +++A+ KY +A++ LGYQADLAY+ ALC ++ KQYG +LKH  EIIE+GVREHPELSVGSNTDGIDVRSVGNS VLQETCL+EAFNL+AAIE+T  N E A EALSDMPPR+E ELDPVTLHNQAL+ MED    GF KLNFLLSNPP+PPETFGNLLLLHCK+GY+ELAADILAEN+HLT++FLS++L+E+LDA+I+VQTSPEEAYRK+D+LT+KHIDQLR+LTK IQDAR+ARDN+AIK SL+ YD +LERYIPVLMA A+IYW+RENYPMVEKLFRQ+AEFC++H+TWKLN AHVFFM+E KFKEAIRYY+PIV+K +D IL+V AIVLANLCV++IM SQNEEAEELMRKIEKEEE++   +PDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPY+KKLGTDTW+YAKRCFLALAE M+KH  M+KDAS++EI+ FLDAAD +G  I T I P V   G+        TVSYE RQLK+++LKLR+
Sbjct:   21 TTTIYTAIRDGRYIDAVQILELERQNFPRSRAALSLLGHCYFMMTDFIQAAKMYEELIKVCPDVEEYKMYYAQSLYKAGLYPEATRASMRVDSPQYTQRITMLKAAVKYQMDELGACKSLLDHCLPDDPETIINTAAILFKQEKFEEAKKKYMEALNALGYQADLAYHVALCCYRLKQYGASLKHVAEIIERGVREHPELSVGSNTDGIDVRSVGNSIVLQETCLIEAFNLKAAIEYTMANMEAAKEALSDMPPRQEHELDPVTLHNQALIGMEDSANDGFHKLNFLLSNPPYPPETFGNLLLLHCKHGYYELAADILAENTHLTFRFLSQDLFEFLDASILVQTSPEEAYRKFDDLTTKHIDQLRKLTKAIQDARIARDNEAIKASLKEYDESLERYIPVLMAQAKIYWERENYPMVEKLFRQSAEFCAEHETWKLNVAHVFFMQENKFKEAIRYYDPIVQKHSDAILDVTAIVLANLCVAYIMTSQNEEAEELMRKIEKEEERLTFTEPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYDKKLGTDTWYYAKRCFLALAENMAKHMQMIKDASMHEILTFLDAADTNGKKIRTVIAPAVTIEGQQQEDFATHTVSYEARQLKQLFLKLRE 660          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A7S1G6M3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6M3_9STRA)

HSP 1 Score: 911 bits (2354), Expect = 0.000e+0
Identity = 449/642 (69.94%), Postives = 551/642 (85.83%), Query Frame = 3
Query:  144 STTAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            S T+ +Y  I++G++ +A+ LL  +L NFPR+RAALSLL YCYY +QD+  A   YEQLVK  P VEEYK+Y AQ+L++AG+Y EATRAA+RVD +QY  +++ LQ  IKYE+DEL  C++L+DQC+ DDPDTI++YA I++KE DY++ARL++ +A++TLGYQ++LAYN ALCY++ KQ+GPALKH  EIIEKGVREHPELSVGSNTDGI+VRSVGN+Q+L+ET LVEAFNL+AAIE   KN + A EALSDMPPR E ELDPVTLHN AL+HM+D+P+AGFRKLNFLL NPP PPETFGNLLLL+ K+ Y++LAAD+LAEN+HLTYK L+ ELYE+LDA+IMVQTSPEEAYRK+D LT+KHI+ LR+ TKQIQDAR+ARDN+AIK SL++YD ALE+YIPVLMAMARIYWDREN+ MVEK+FRQ+AEFCS+H+TWKLN AHVFFM+E KFKE+IRYYEPIVKK  D+IL+V AIVLANLCVS+IM SQNEEAEELMR+IE+EEE++A +DPDKQ FHLCIVNLVIGTLYCAKGN+EFGISRI+KSLEPY++KLGTDTW+YAKRCFL LAE ++KH LMLKDA+ YEI++FLDAAD HG  I T IG Q    G+      N  VS+E R LK+++LKLR+
Sbjct:   33 SYTSTIYGMIREGKYADAIRLLNLQLQNFPRSRAALSLLGYCYYYLQDFGNAAQAYEQLVKFFPEVEEYKIYYAQTLHRAGVYAEATRAALRVDDSQYHHKLLMLQAAIKYEEDELVPCRTLLDQCVPDDPDTIVNYACITYKEGDYEEARLRFNEALNTLGYQSELAYNIALCYYQMKQFGPALKHIAEIIEKGVREHPELSVGSNTDGIEVRSVGNTQILRETALVEAFNLKAAIEFNLKNMDAAKEALSDMPPRSEDELDPVTLHNLALMHMDDEPSAGFRKLNFLLQNPPCPPETFGNLLLLYIKHQYYDLAADVLAENTHLTYKHLTPELYEFLDASIMVQTSPEEAYRKFDILTNKHIENLRKFTKQIQDARLARDNEAIKHSLKLYDDALEKYIPVLMAMARIYWDRENHAMVEKIFRQSAEFCSEHETWKLNVAHVFFMQENKFKESIRYYEPIVKKHMDSILDVTAIVLANLCVSYIMTSQNEEAEELMRRIEREEERIAYEDPDKQTFHLCIVNLVIGTLYCAKGNYEFGISRIMKSLEPYDRKLGTDTWYYAKRCFLGLAETLTKHMLMLKDATFYEILSFLDAADAHGKGILTMIGHQE---GEVDTAVHN--VSFEARMLKRMFLKLRE 669          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A7S3H5F2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5F2_9STRA)

HSP 1 Score: 874 bits (2257), Expect = 3.190e-311
Identity = 433/649 (66.72%), Postives = 540/649 (83.20%), Query Frame = 3
Query:  150 TAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYE---------MAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            T+ +Y AIK+ R+ EA+ +L  EL NFPR+RAALSLL YCYY+  D+ +A   YEQLV +CP VEEYK+Y AQSLYKAG+YP+A RAA+RV+  QY QR++ LQ  IKYEQDEL+A K  +DQC SD+PD I++YA+I+FKE  ++ AR +Y +A++T+GYQADLAYN ALC+++ KQYGPAL+   EII+KG+R HPELSVG+NTDG+DVRSVGNS VL+ETCL+EAFNL+AAIE   K+ E          A EAL+DMPPR E ELDPV+LHNQA++  E++PTA F+KL++LL+NPP+PPETFGNLLLLHCKY  +++AA +LAENSHLTYK+LS+E Y+YLDA IMV TS EEAYRK+DEL++K+I++LR+ TKQIQDAR+ARDN+ IK+SL++YD  LE+YIPVLMA ARIYW+R+NYPMVEKLF Q+AEFCS+H+ WKLN AHVFFM+E KFK+AIRYY+PIVK+ AD++L+V AIVLANLCV +IM SQNEEAEELMR+IEKEEE+++  +PDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSL+PY+KKL TDTW+YAKRCFLALAE MSKH L+LKD S+ EI+ FLD A+  G  +P+ IGPQVD G     +    TV++E RQLK ++LKL D
Sbjct:   18 TSTIYTAIKEHRYNEAIEVLQLELQNFPRSRAALSLLGYCYYRTGDFTSAAQSYEQLVGICPDVEEYKLYYAQSLYKAGLYPDAVRAAIRVEGEQYAQRVLMLQSVIKYEQDELSASKGYLDQCHSDEPDVIVNYAAIAFKEGLFEKARDQYTEALNTMGYQADLAYNIALCHYRMKQYGPALRTIAEIIDKGIRNHPELSVGTNTDGVDVRSVGNSAVLKETCLIEAFNLKAAIEFEMKSSEPAKVITDSSAAKEALTDMPPRLESELDPVSLHNQAIIFCEEEPTASFKKLSYLLANPPYPPETFGNLLLLHCKYQNYDIAAGLLAENSHLTYKYLSQEQYDYLDACIMVPTSVEEAYRKFDELSAKYIEKLRRFTKQIQDARLARDNELIKSSLKLYDDELEKYIPVLMAQARIYWERDNYPMVEKLFFQSAEFCSEHEVWKLNVAHVFFMQETKFKDAIRYYDPIVKRLADSLLDVTAIVLANLCVGYIMTSQNEEAEELMRRIEKEEERLSFSEPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLDPYDKKLHTDTWYYAKRCFLALAENMSKHMLILKDTSMDEILEFLDKAEAAGQKVPSVIGPQVDVGDGGADSAPQ-TVAFEARQLKNLFLKLYD 665          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A2R5GSG9_9STRA (Tetratricopeptide repeat protein 30A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSG9_9STRA)

HSP 1 Score: 836 bits (2160), Expect = 3.730e-296
Identity = 423/666 (63.51%), Postives = 526/666 (78.98%), Query Frame = 3
Query:  150 TAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRK---NYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEEKFKEAIRYYEPIVKKQAD--------------------TILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQI--GPQ--VDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            T ++Y  +K+ ++ E ++ L  EL NFPR+RAALSLL+Y YY +QDY  A  MYEQL K+ P V+EY++Y AQSLYKAG+YPEATRA  +VD  QY QRM+ LQ  IKYEQ++L AC+SL DQCL+DDP+TI+ +A I++KE  +++AR K+ +AM+TLG+QA LA+N ALC+++  ++GPALKH  EIIE+GVREHPEL VGSN DGIDVRSVGNSQVL ET LVEAFNL+AAIE++ K   N + A EAL+DMPPR E ELDPVTLHNQAL++++ D   G RKLNFLL NPP PP+TFGNLLLL+CK   + +AAD+LAE++HLT+K LS ELY++LDA IM +TSPEEA+RKYD+L  KH++ LR+LTK IQD+R  R++DA++T+L  YD ALERYIPVLMA+ARIYW+RE+Y MVEK+FRQ++EFCS+H  WKLN AHVFFM+ KFK+AI +YEPIVK  +                     +IL+V AIVLANLCV++IM SQNE AE+LMR+IEKEEE+VA +DPDKQCFHLCIVNLVIG LYC+KGN EFGISRIIKSLEPY+KKLGTDTWFYAKRCFLALAE +SKH +ML DAS  EII FLDAAD+HG ++PT I  GP+  VDP   +        VS+E R LKK++LKL D
Sbjct:   31 TEVIYGLLKEKKYDEVINKLALELQNFPRSRAALSLLAYSYYMLQDYPNAVRMYEQLTKLFPDVQEYRIYFAQSLYKAGLYPEATRACFQVDDPQYTQRMVMLQASIKYEQNDLRACESLADQCLADDPETIVCHACIAYKEGKFEEAREKFQEAMNTLGFQASLAHNIALCHYQKGEFGPALKHVAEIIERGVREHPELGVGSNADGIDVRSVGNSQVLHETALVEAFNLKAAIEYSMKPAGNLDAAREALNDMPPRSEGELDPVTLHNQALMNIDQDFAPGCRKLNFLLDNPPHPPQTFGNLLLLYCKNSLYGIAADVLAEHTHLTFKLLSPELYDFLDATIMTETSPEEAFRKYDDLAKKHVETLRKLTKNIQDSRTNRESDAVRTALAEYDQALERYIPVLMALARIYWEREHYAMVEKIFRQSSEFCSEHPVWKLNVAHVFFMQGKFKQAIHFYEPIVKASSSAAGSTASATSAVNPASYSTGSILDVTAIVLANLCVAYIMTSQNERAEDLMRRIEKEEERVAAEDPDKQCFHLCIVNLVIGNLYCSKGNMEFGISRIIKSLEPYDKKLGTDTWFYAKRCFLALAETLSKHMMMLPDASYREIIDFLDAADKHGKNVPTVIESGPEANVDPAIHN--------VSHEARLLKKMFLKLMD 688          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A7S1DMM3_HEMAN (Hypothetical protein n=4 Tax=Hemiselmis TaxID=77924 RepID=A0A7S1DMM3_HEMAN)

HSP 1 Score: 830 bits (2143), Expect = 1.360e-293
Identity = 407/642 (63.40%), Postives = 520/642 (81.00%), Query Frame = 3
Query:  150 TAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE----KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLR 2063
            T +VY  I++ ++ EA+ +L+++L  FPR+RAALSLL YCYYQ+QD+  A+  YEQL +  P V+EYK Y AQSLYK   Y +ATR AV +++  Y+QR + LQ  I+YEQDEL +CK+ +DQCL DDPDTI+ + ++ FKE D++ AR K+ +AM+ LGYQ +LAYN ALC+++ KQ+GPA+KH  +IIEKGVREHPELSVGSNT+GIDVRSVGNSQVL++T LVEAFNL+AAIE+  KN+  + EAL+DMPPR E+ELDPVTLHN AL+HME++PTAGF+K+N+L++  P PPETFGNLLLL+CKY Y++LAAD++AEN+ LT+K LS +LY +LDA I++QTSP E Y K+D L +KHI+ LR+LTKQIQDAR+ RDN+AIK SL+ YD ALERYIPVLMAMARIYWD ++Y MVEK+FRQ+AEFCS+HD WKLN AHVFFM+     K+ EAIRYY+P  K+ +D +LEV A+VLANLCVS+IM SQNE+AE+L+R++EKEEE++   +PDKQCFHLCI+NLVIGTLYCAKGNFEFGISRIIKSLEPY +KL  DTWFYAKRC LAL E ++KH +MLKD +  E IAFLD A+QHG  I T IG  +DP G+    K   TV+++ R +K++ LKLR
Sbjct:   50 TVMVYTLIREEKYQEAIQVLSNQLSMFPRSRAALSLLGYCYYQVQDFNHASEKYEQLCRQYPEVDEYKFYYAQSLYKGSAYEQATRVAVSIENESYRQRKLNLQAAIEYEQDELPSCKAHLDQCLPDDPDTIVGFGAVLFKEGDFEGARAKFQEAMNVLGYQPELAYNIALCHYRLKQFGPAMKHIADIIEKGVREHPELSVGSNTEGIDVRSVGNSQVLKQTALVEAFNLKAAIEYVMKNFGASKEALTDMPPRSEEELDPVTLHNLALMHMEEEPTAGFQKMNWLVNQIPCPPETFGNLLLLYCKYQYYDLAADVMAENATLTFKHLSPDLYCFLDATILMQTSPHEGYHKFDGLANKHIEVLRKLTKQIQDARINRDNEAIKKSLKDYDDALERYIPVLMAMARIYWDLQHYQMVEKIFRQSAEFCSEHDVWKLNVAHVFFMQGSQDGKYNEAIRYYDPFYKRSSDDLLEVSAMVLANLCVSYIMTSQNEKAEDLLRQVEKEEERMGYSEPDKQCFHLCIINLVIGTLYCAKGNFEFGISRIIKSLEPYNRKLQADTWFYAKRCLLALIETLAKHMIMLKDQTFSETIAFLDQAEQHGKGITTVIG--LDPQGRQKSVK--NTVAFQARAIKRLILKLR 687          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A8J5XFA0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFA0_DIALT)

HSP 1 Score: 827 bits (2137), Expect = 7.200e-293
Identity = 412/640 (64.38%), Postives = 504/640 (78.75%), Query Frame = 3
Query:  150 TAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            T  VY  I   R+ EA+ +L     +FP +RAA SLL YCY+   D+ AA   YE LV++CP VEEYK+YLAQSL+KAG+Y  A R    ++      + + LQ  ++YEQD+L   ++++DQC+ DDPDT ++ A + +KE   D+AR K+ DA++T+G  A+LAYN ALCYF  KQYGPALKH  EIIE+GVREHPELSVGS  DG++VRSVGNS VL++T LVEAFNL+AAIE+   N + A EAL+DMPPR E+ELDPVTLHN AL+ ME +PT GFRKLNFL+ NPP PPETF NLLLL+CK+ Y++LAAD+LAEN+ LTYKFL+ ELY++LDA IMV TSPEEA+RK+D+L+ +H+D LR+LTKQIQDAR+ARDN+ IK  L+ YD ALERY+P LM+ A+IYW RE+YPMVEK+FRQ+AEFCS+HD WKLN AHVFFM+E KFKEAIRYYEPIVKKQA+ +L VPAIVLANLCVS+IM SQNEEAEELMR +EKEEE+    DPD+QCFHLCI+NLVIGTLYCAKGNFEFGI R+IKSLEPY+KKLG DTWFYAKR FLALAE ++KH +MLKD +  +I+AFLDA D HG S+PT+I    D        K    VSYE R LKK+YLKLRD
Sbjct:   40 TERVYGLIGQQRYAEAIQILQQAQYDFPTSRAANSLLGYCYFHTGDFLAAVQAYEALVRLCPDVEEYKLYLAQSLHKAGVYDTALRHCQSIEDPALSAKSLLLQAAVRYEQDDLQGTRAVIDQCMPDDPDTYVNLACVLYKEGLPDEARQKFLDALNTVGSNAELAYNVALCYFNAKQYGPALKHIAEIIERGVREHPELSVGSQADGLEVRSVGNSSVLKQTALVEAFNLKAAIEYAMGNADAAREALADMPPRGEEELDPVTLHNTALMGMEANPTGGFRKLNFLIQNPPCPPETFANLLLLYCKHQYYDLAADVLAENAQLTYKFLTPELYDFLDATIMVVTSPEEAFRKFDDLSHRHVDGLRKLTKQIQDARLARDNEGIKACLKQYDEALERYVPCLMSQAKIYWAREHYPMVEKIFRQSAEFCSEHDVWKLNVAHVFFMQESKFKEAIRYYEPIVKKQAEQLLSVPAIVLANLCVSYIMTSQNEEAEELMRTVEKEEERAVFNDPDRQCFHLCIINLVIGTLYCAKGNFEFGIGRVIKSLEPYQKKLGLDTWFYAKRTFLALAETLAKHMIMLKDGTFRDILAFLDAMDSHGKSVPTKIQDHPD----KPVDKNRHNVSYEARILKKMYLKLRD 675          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: F0YKZ1_AURAN (APG6 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKZ1_AURAN)

HSP 1 Score: 841 bits (2173), Expect = 1.160e-292
Identity = 423/568 (74.47%), Postives = 488/568 (85.92%), Query Frame = 3
Query:  366 QSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD 2066
            ++LYKAG+YP+ATRAA+RVDS Q+ QR                        CL DDP+TII+YA+I+FKE  YD+AR KY +AM+TLGYQADLA N ALCY+K KQY  ALK   EIIE+GVREHPELSVGSNTDGIDVRSVGNS VLQETCLVEAFNL++AIE+   N + A EALSDMPPR+E+ELD VTLHNQAL+HM++DP+ GFRKLNFLLSNPPFPPETFGNLLLLHCK+GY++LAADILAEN+HLTYKFLS EL+EYLDA+IMVQTSPEEAYRKYD+LT+KHIDQLR+LTK IQDAR++RDN+AIK SL+ YD ALERYIPVLMAMARIYWD+ENYPMVE+LFRQ+AEFCS+H+ WKLN AHVFFM+E KFKEAIRYY+PIVKK+++ IL+VPAIVLANLCVS+IM SQNEEAEELMRKIEKEEE++A  +PD+QC+HLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPY+KKLG DTW+Y+KRCFLALAE M+KH LMLKDAS++EII FL+A D HG +I T I P VDP G H P +    VSYE RQLKKI+LKLRD
Sbjct:  512 RALYKAGLYPDATRAALRVDSPQFAQR------------------------CLPDDPETIINYAAIAFKEGQYDEARGKYIEAMNTLGYQADLACNVALCYYKQKQYAAALKSLAEIIERGVREHPELSVGSNTDGIDVRSVGNSSVLQETCLVEAFNLKSAIEYQMGNLDAAKEALSDMPPRQEEELDAVTLHNQALVHMDEDPSTGFRKLNFLLSNPPFPPETFGNLLLLHCKFGYYDLAADILAENTHLTYKFLSNELFEYLDASIMVQTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARISRDNEAIKQSLKFYDEALERYIPVLMAMARIYWDKENYPMVERLFRQSAEFCSEHEVWKLNVAHVFFMQESKFKEAIRYYDPIVKKKSENILDVPAIVLANLCVSYIMTSQNEEAEELMRKIEKEEERLAYTEPDRQCYHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYDKKLGPDTWYYSKRCFLALAENMAKHMLMLKDASVHEIINFLEACDSHGANITTVITPTVDPDGNH-PAEVTHNVSYEARQLKKIFLKLRD 1054          
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Match: A0A7S4G7V6_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G7V6_9EUGL)

HSP 1 Score: 823 bits (2126), Expect = 2.610e-291
Identity = 410/641 (63.96%), Postives = 508/641 (79.25%), Query Frame = 3
Query:  150 TAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDYKAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQQRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDDARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRKIEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHGHSIPTQIGPQVDPGGK-HTPTKWNCTVSYETRQLKKIYLKLRD 2066
            T  VY  IK+G+F E   +L+ EL NFPR+RAALSLL Y YYQ+ D+  A+TMYEQL K+CP VEEYK+Y  Q+LYK+G YPEA +    V+  ++ QR+  L   IKYEQD+L   KS +D+CL DDPD ++    + FKE  Y+DA  KY +AM+ LG+QADLAYN ALC++K K YGP LKH  EIIE+G+REHPELS+GSNT+GI+VRSVGNSQVL+ET LVEAFNL++AIE+  KN + A EALSDMPPR + ELDPVTLHN AL++MEDDPT+GF+KLNFLL NPPFPPETF NLL+L+ KY Y++LAAD+LA+NSHL++++LS++LY++LD  I  QTSPEEAYRK+D L+ KHID LR+LTK IQD +  +D DA+K +L  YD ALE YIPVLMA A+IYWD ++Y MVEK+FRQ+AEF S+HD WKLN AH FFM E KFKEA+RYYEP V+K  D IL   AIVLANLCVS+IM S+NE+AE++MR+IEKEEE+++  DP+KQ  HLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPY +K+ TDTWFYAKRCFLALAE ++KH +MLKD +  EI+AF DAAD HG +IP  I   +DP  + H+ T    TV +E R LKK++LKLR+
Sbjct:   33 TQTVYTFIKEGKFEEVTRILSHELENFPRSRAALSLLGYAYYQLGDFAGASTMYEQLTKICPDVEEYKIYYGQALYKSGSYPEALKVLSAVNGEEHHQRIQKLLASIKYEQDDLTGTKSHLDKCLQDDPDVVVLTGCVQFKEGRYEDASNKYVEAMNALGFQADLAYNIALCHYKTKHYGPCLKHIAEIIERGIREHPELSIGSNTEGIEVRSVGNSQVLKETALVEAFNLKSAIEYMMKNMQAAKEALSDMPPRSDDELDPVTLHNTALMNMEDDPTSGFKKLNFLLQNPPFPPETFQNLLILYIKYQYYDLAADVLADNSHLSFQYLSQDLYDFLDGCITCQTSPEEAYRKFDILSQKHIDHLRKLTKHIQDKKNEQDTDAVKKALRDYDEALELYIPVLMAQAKIYWDLDHYAMVEKIFRQSAEFTSEHDIWKLNVAHTFFMSETKFKEAMRYYEPAVEKFQDNILSCSAIVLANLCVSYIMTSENEKAEDVMRRIEKEEERLSFSDPEKQPLHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYNRKIMTDTWFYAKRCFLALAETLAKHMIMLKDITYQEILAFFDAADVHGKTIPAVI--HMDPSKQDHSETN---TVRHEARLLKKLFLKLRE 668          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig107.1025.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ3_ECTSI0.000e+088.60Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2B7F7_9STRA0.000e+073.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RJ83_9STRA0.000e+071.72Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1G6M3_9STRA0.000e+069.94Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S3H5F2_9STRA3.190e-31166.72Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A2R5GSG9_9STRA3.730e-29663.51Tetratricopeptide repeat protein 30A n=1 Tax=Honda... [more]
A0A7S1DMM3_HEMAN1.360e-29363.40Hypothetical protein n=4 Tax=Hemiselmis TaxID=7792... [more]
A0A8J5XFA0_DIALT7.200e-29364.38Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
F0YKZ1_AURAN1.160e-29274.47APG6 domain-containing protein n=1 Tax=Aureococcus... [more]
A0A7S4G7V6_9EUGL2.610e-29163.96Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig107contigC-linearis_contig107:118150..126229 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1154.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FMZ3
Preferred nameTTC30B
KEGG koko:K19683
Hectar predicted targeting categoryother localisation
GOsGO:0001736,GO:0001738,GO:0002009,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0005874,GO:0005879,GO:0005881,GO:0005929,GO:0005930,GO:0006464,GO:0006807,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007164,GO:0007275,GO:0007368,GO:0007389,GO:0008104,GO:0008150,GO:0008152,GO:0009653,GO:0009799,GO:0009855,GO:0009888,GO:0009987,GO:0010970,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0016874,GO:0016879,GO:0016881,GO:0018095,GO:0018193,GO:0018200,GO:0019538,GO:0022607,GO:0030030,GO:0030031,GO:0030705,GO:0030990,GO:0030992,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032838,GO:0032991,GO:0033036,GO:0035720,GO:0035735,GO:0036064,GO:0036211,GO:0036372,GO:0042073,GO:0042886,GO:0042995,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0045184,GO:0046907,GO:0048729,GO:0048856,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060271,GO:0060429,GO:0070735,GO:0070738,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0097014,GO:0097542,GO:0099080,GO:0099081,GO:0099111,GO:0099512,GO:0099513,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140096,GO:1901564
EggNOG free text desc.intraciliary transport
EggNOG OGsKOG4340@1,KOG4340@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons17
Model size2298
Cds size1929
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927406.1261165-UTR-C-linearis_contig107:118149..1182691622927406.1261165-UTR-C-linearis_contig107:118149..118269Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 118150..118269 +
1690879682.3264594-UTR-C-linearis_contig107:118149..1182691690879682.3264594-UTR-C-linearis_contig107:118149..118269Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 118150..118269 +
1622927406.1357212-UTR-C-linearis_contig107:118584..1186041622927406.1357212-UTR-C-linearis_contig107:118584..118604Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 118585..118604 +
1690879682.3387103-UTR-C-linearis_contig107:118584..1186041690879682.3387103-UTR-C-linearis_contig107:118584..118604Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 118585..118604 +
1622927406.3604383-UTR-C-linearis_contig107:126000..1262291622927406.3604383-UTR-C-linearis_contig107:126000..126229Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 126001..126229 +
1690879682.5108044-UTR-C-linearis_contig107:126000..1262291690879682.5108044-UTR-C-linearis_contig107:126000..126229Chordaria linearis ClinC8C monoicousUTRC-linearis_contig107 126001..126229 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927406.187164-CDS-C-linearis_contig107:118604..1186881622927406.187164-CDS-C-linearis_contig107:118604..118688Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 118605..118688 +
1690879682.349079-CDS-C-linearis_contig107:118604..1186881690879682.349079-CDS-C-linearis_contig107:118604..118688Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 118605..118688 +
1622927406.1987257-CDS-C-linearis_contig107:119253..1193821622927406.1987257-CDS-C-linearis_contig107:119253..119382Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 119254..119382 +
1690879682.3616743-CDS-C-linearis_contig107:119253..1193821690879682.3616743-CDS-C-linearis_contig107:119253..119382Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 119254..119382 +
1622927406.2130022-CDS-C-linearis_contig107:119902..1200101622927406.2130022-CDS-C-linearis_contig107:119902..120010Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 119903..120010 +
1690879682.3718996-CDS-C-linearis_contig107:119902..1200101690879682.3718996-CDS-C-linearis_contig107:119902..120010Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 119903..120010 +
1622927406.222926-CDS-C-linearis_contig107:120788..1209061622927406.222926-CDS-C-linearis_contig107:120788..120906Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 120789..120906 +
1690879682.379978-CDS-C-linearis_contig107:120788..1209061690879682.379978-CDS-C-linearis_contig107:120788..120906Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 120789..120906 +
1622927406.2320032-CDS-C-linearis_contig107:121268..1213971622927406.2320032-CDS-C-linearis_contig107:121268..121397Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 121269..121397 +
1690879682.3891315-CDS-C-linearis_contig107:121268..1213971690879682.3891315-CDS-C-linearis_contig107:121268..121397Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 121269..121397 +
1622927406.2438626-CDS-C-linearis_contig107:121680..1217841622927406.2438626-CDS-C-linearis_contig107:121680..121784Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 121681..121784 +
1690879682.3989108-CDS-C-linearis_contig107:121680..1217841690879682.3989108-CDS-C-linearis_contig107:121680..121784Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 121681..121784 +
1622927406.2549074-CDS-C-linearis_contig107:121904..1220451622927406.2549074-CDS-C-linearis_contig107:121904..122045Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 121905..122045 +
1690879682.4086063-CDS-C-linearis_contig107:121904..1220451690879682.4086063-CDS-C-linearis_contig107:121904..122045Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 121905..122045 +
1622927406.2652347-CDS-C-linearis_contig107:122238..1223991622927406.2652347-CDS-C-linearis_contig107:122238..122399Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 122239..122399 +
1690879682.4180634-CDS-C-linearis_contig107:122238..1223991690879682.4180634-CDS-C-linearis_contig107:122238..122399Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 122239..122399 +
1622927406.2750895-CDS-C-linearis_contig107:122618..1227121622927406.2750895-CDS-C-linearis_contig107:122618..122712Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 122619..122712 +
1690879682.4280043-CDS-C-linearis_contig107:122618..1227121690879682.4280043-CDS-C-linearis_contig107:122618..122712Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 122619..122712 +
1622927406.285418-CDS-C-linearis_contig107:122944..1230521622927406.285418-CDS-C-linearis_contig107:122944..123052Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 122945..123052 +
1690879682.437623-CDS-C-linearis_contig107:122944..1230521690879682.437623-CDS-C-linearis_contig107:122944..123052Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 122945..123052 +
1622927406.2945774-CDS-C-linearis_contig107:123484..1236671622927406.2945774-CDS-C-linearis_contig107:123484..123667Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 123485..123667 +
1690879682.4501727-CDS-C-linearis_contig107:123484..1236671690879682.4501727-CDS-C-linearis_contig107:123484..123667Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 123485..123667 +
1622927406.3064816-CDS-C-linearis_contig107:123809..1239501622927406.3064816-CDS-C-linearis_contig107:123809..123950Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 123810..123950 +
1690879682.4616556-CDS-C-linearis_contig107:123809..1239501690879682.4616556-CDS-C-linearis_contig107:123809..123950Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 123810..123950 +
1622927406.31568-CDS-C-linearis_contig107:124109..1242111622927406.31568-CDS-C-linearis_contig107:124109..124211Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 124110..124211 +
1690879682.4711792-CDS-C-linearis_contig107:124109..1242111690879682.4711792-CDS-C-linearis_contig107:124109..124211Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 124110..124211 +
1622927406.3258603-CDS-C-linearis_contig107:124557..1246741622927406.3258603-CDS-C-linearis_contig107:124557..124674Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 124558..124674 +
1690879682.479376-CDS-C-linearis_contig107:124557..1246741690879682.479376-CDS-C-linearis_contig107:124557..124674Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 124558..124674 +
1622927406.3371148-CDS-C-linearis_contig107:124979..1250901622927406.3371148-CDS-C-linearis_contig107:124979..125090Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 124980..125090 +
1690879682.4907224-CDS-C-linearis_contig107:124979..1250901690879682.4907224-CDS-C-linearis_contig107:124979..125090Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 124980..125090 +
1622927406.3504245-CDS-C-linearis_contig107:125901..1260001622927406.3504245-CDS-C-linearis_contig107:125901..126000Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 125902..126000 +
1690879682.501638-CDS-C-linearis_contig107:125901..1260001690879682.501638-CDS-C-linearis_contig107:125901..126000Chordaria linearis ClinC8C monoicousCDSC-linearis_contig107 125902..126000 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig107.1025.1prot_C-linearis_contig107.1025.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig107 118605..126000 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig107.1025.1

>prot_C-linearis_contig107.1025.1 ID=prot_C-linearis_contig107.1025.1|Name=mRNA_C-linearis_contig107.1025.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=643bp
MSTTAIVYEAIKDGRFPEAVHLLTSELGNFPRNRAALSLLSYCYYQMQDY
KAATTMYEQLVKVCPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSTQYQ
QRMIALQGGIKYEQDELAACKSLVDQCLSDDPDTIISYASISFKEQDYDD
ARLKYADAMHTLGYQADLAYNTALCYFKDKQYGPALKHADEIIEKGVREH
PELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEHTRKNYEMAAE
ALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPET
FGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSP
EEAYRKYDELTSKHIDQLRQLTKQIQDARMARDNDAIKTSLEMYDAALER
YIPVLMAMARIYWDRENYPMVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE
KFKEAIRYYEPIVKKQADTILEVPAIVLANLCVSHIMISQNEEAEELMRK
IEKEEEKVAQQDPDKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEP
YEKKLGTDTWFYAKRCFLALAEQMSKHTLMLKDASLYEIIAFLDAADQHG
HSIPTQIGPQVDPGGKHTPTKWNCTVSYETRQLKKIYLKLRD*
back to top

mRNA from alignment at C-linearis_contig107:118150..126229+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig107.1025.1 ID=mRNA_C-linearis_contig107.1025.1|Name=mRNA_C-linearis_contig107.1025.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8080bp|location=Sequence derived from alignment at C-linearis_contig107:118150..126229+ (Chordaria linearis ClinC8C monoicous)
CGGATCCAGGGCGATAATACGATCTGGCTACGCCGGGGTGCCCATTTACG ACACCACAAAGGCACGGTACTGCTGCCATCGAGCTGTGTTGAGAGGATCC AGGCAATCGATTCCTATCAGGTGTGAATTTCGAGGATCTTTCCAACAGCA GTGTGAAGGTTTGCCGAAGGTGCACGAGCATCATCTTTGGCCTTGCATGC TTCAGTGTGTACGCTAACTCACGACAAGGCGGAGCAATTCGGCAACACGC ATCATTGGAGCACATCTATGTGCATCTTGTTTATTGTTTAGAACCACAAC GTGAGCAGGGTGGTCTATAACCTACATGCACCCACGCTGGATCTACGTAC TTGGATCTTGACATCCTGACCTTTATCTCTCTCTCTCTCTCTCTCTCTTT CCGTGCATGAAATTGCTACCGGCCAAACGTGACAGGCAAGACACGGTACA GTAGCATGTCGACAACTGCCATCGTTTATGAAGCAATCAAGGATGGGCGC TTTCCCGAGGCGGTGCATCTCCTCACTTCCGAGCTCGGGGTAAGTAGCTG TTGGTGATGTGGAAGCACGGAGGGTATTTGTTTTTGTTGGTGCTCTCTCG GTATGAGTCTCTGTTCCAGTTAGTGTGCATATCTCTTCAGCGGTGCATGG GGCAGACGTGATACCCTCCGGTTGTCCCAGAGTTCAAAGCGCTTGGGTAG TAGACAGCATTGCGTAGCGATAGCGATGGATACGTCGACGTCACTCCGTG TCCCGCGCATATGGTGCTACAACGATAGTCCTGTTTCCAGCGGTATAGAC CAGCCAGCGTATAGACTAGACGACGTATCCGCATGGAGCATTGCTAGCCT CTTCCAGTACTCAAGTTAATTGCACATCCATTTTCCATCACTTGGCGCGA GTATCTCCTTCAATTCTCAGCACCACCCGTGGCCCCCAGCATCACGACTG GAGAATATGAAAATATGGCGCAAAGCTGACGGCCCAATACTGAGCATCAA ACTCGCAGTCTGGTGCAGGTCATACGGTCACAAGCTTTGGAAGCTTCATT GCGTACGCTGTTCAAATCGGGCTAAATTTGCCCAATCTTCCGCTTTCATA ACAGAACTTTCCGCGGAACAGGGCGGCATTGTCTCTGTTGAGTTACTGCT ACTACCAGATGCAAGACTACAAAGCAGCAACCACCATGTACGAACAACTC GTGAAGGTCTGCCCCAGCGTCGAAGAGTACAAGGTGAGTGAATGTGAGTA GGATGCACATGCTGTGTGAAGGTGATCCAGAGAGGGGCAAAGTTCCTTAT GCGTTTTCTTGGTTTCCTCTCATAAACCAGGGAATCGCTGGTACTTTTGG GTTTCTCTACTCGGTCTGGTAGAACCTAGCCGCAATATCGAATGCCGTAC CGTCGTATGGCCATAACCCTATTGGACCTATAAGCCCCGCAGCAGGCTGT GGATCCAATGTTCGAAAATGATATGTTTTTTGCCTATTTCCGGCAGAATT CCGTCCTCGATTAACCGCGTTGCAAAAGTACAAGGGCTTAGATTAGATCT TCGGTCGCGACTTGTTTTCAAGACGAAGGTGCGGCGATTTGGTCGTTGTG GCAGGTTGGTACTGAACACGGAAGTCTAATTGGCGGCTTGTGAACTTTTG CCGACAAATTACTCTCCGTCTTAAGAGATCCATCAGCACTACAGTATCTA CGGTATCGAAACAAATGCGGAGAAATGGATGGATGCGTGCTTCTATACTC AAGGTGTATCTCGCACAATCGCTATATAAGGCTGGCATGTATCCGGAGGC GACGAGAGCCGCAGTGCGAGTCGACAGTACACAGTATCAGCAGAGAATGA TTGCACTTCAGGTATGTGCGGAAGAAACTTGCTGCCCATTTGGCCACCCG TGGTCGCTGTGTGCATAGCTTCATGTCGAGCACACACACACGGTGTGAAT AGATTGTTGTTTCCCAAGGATCTGCGAAAAGTAGAAAGAGGAAAAAGAGG GAAGAGTTTCTTCAGATTGGACTTGCACCAGCACCAACATCAGTTGTGTG TTTCTTGTACTGTATCATCTAAGGGGGGTAAGCCCTCACAGATTCTACAG GTCCTCTCGCTTGTATGTGTGGTGTGGAGTACACACCGGGTCTCACTCTC GAGGGACGGAACGGGCACAACGAGAAGTGGGGGCGAGACAGCCAGGGGTG CAATTGCACACGGGTAGATACCCCGCATTCATCCGAGGAACCTTCTGTTC CTCCGAGGAATCCCGGGAACGGTTCTTTCTCTCTCTGTAATACCCCGGCC AGGACATAGGTTCTAGCTGGTCATCTGACGTCACTCTAACGGGTCAATCT GCCGTCGTTTTTTTAATGAACATGACTGTGAATGGTGGCATTCACAATCA TGTTCATTAAAAAACAACGGCTATACTACGAATGTCCGAGCGGACCAACG TCTTTGTTGCATATGCCACAGGTTTTCAGCTGTTTTTGCTCGCTGTGCCA GCGTGTTTGCGTCAGAATTCGTATGACTCAGAACGCATGCAAGGTACGCA GAAACGCCGATGGCCAGACTTGGATATTGAGTAGAGCACCGACCCCCCCA TTATGTTTTTTTCGTTTTGCCTGTTTTCTTGGTGTCTAGGGGGGCATCAA GTACGAGCAAGACGAGCTAGCAGCATGCAAGAGTCTTGTCGACCAGTGCC TGAGCGATGATCCGGACACCATAATCAGTTATGCGTCGATTTCCTTCAAA GAACAAGGTATGTATTTTCTAGACAAGTGTTGATTGTAATTCAGGAAACG ATACACCCTCTAAGCAACCGACACATCGTAGTCTTGGAAGTAGCCAAACG CGAATTGCCAGGATCGCTTGGATATAAAGACGGGAGAGAGAAGGTGTACG AAATAGAAAAATTGCTTGTTTTCTGCGACCAAAGCGATGGTACGAGTACG GTAGTGCAGAATAGAAGGAGAAACGGCGCGGCCTTACCCTGAACCCACCA GAAGCATGTTCTGGCATGTTCTGGATAGCGCAGTTTACGTGCGCCATGTT TTTGTGCAATGTCCCGTTTTCACACCGGGGTTTGAAACAAAACTCCCTCC CCGCCATGTTGCCGCGAAGACTATGACGACGCCAGGCTAAAATACGCGGA CGCCATGCACACTCTCGGGTACCAGGCAGATCTCGCCTACAACACCGCGC TATGCTACTTCAAGGACAAGCAGTACGGCCCTGCATTGAAACATGCCGGT GAGCTGATTGTTACGCCCTCAAGATCTTGGAGCGGGCAGGTTTCGATATG AACTGTTTGGCGAGACGCCCCAGTTGAGGCGGGATATTTATTTATGTTAC AATTTGTTGTCGGAAGAGCCGTATCGAGATTGACTACCGCTAGGAGCAGC TAACTCGCTGAAGCACCGAAACACGACTCCAAATATGAAAGCATTGCTCT GGTGATGAGTAACGGCTGTCGTGCCGTGTCGTGTCGTAAACCCGCTGTTT TCTCTGTTCGCACGATATTGATCATGATCAGACGAGATCATCGAGAAAGG AGTACGTGAACATCCAGAGCTGTCCGTCGGTAGCAACACAGATGGAATCG ATGTACGATCTGTCGGCAATTCACAGGTTCTGCAGGTGAGATATTCCTTG TGTTAGCTCGTTAAGGACAGGGCAAGCGGCCAGCTATTATAGGTGCTTAC CAACCTTGGGTGCCAACAAGCCAGCACTACGTCGTCGTTCCTTCCATGTG ACCAGGAAACTTGTTTGGTTGAGGCGTTCAACCTACGGGCAGCCATTGAG CACACAAGGAAAAACTACGAAATGGCGGCGGAGGCCCTCAGCGACATGCC ACCTCGGAGAGAACAAGAGCTGGACCCTGTAACCCTCCACAATCAGGCAT GTACATACATATTACTGTCGTAGCATTTGTATGGCATTCGTATCGTGCGG TGCTCGGCACGCCTCCTCACGCACCTTGAGACATAGGTCGCGGGCTTGAA AGTAGCCGTAGGCCCGCTACCGGCCGCAAGGGACGGCGTAAAACCTCATT TGGTACTTTGATTTGATGATTTCTCGTGCGCTCTTCCAGGCCCTTTTGCA CATGGAGGATGACCCAACAGCAGGTTTTCGCAAGCTTAATTTCCTGCTGT CCAACCCACCGTTTCCGCCGGAGACATTCGGCAACCTACTCCTGTTGCAC TGCAAATACGGGTACCACGAACTGGCCGCAGACATCTTGGCAGAAAACAG GTGATCATCCTAGTTGGTCTTGTTGCTCCATCGCTCACATGCATTTCATG GGCGCACGCCACATATGGGATTGGCCAAATGATAACTACGTGTCGGTTCC ACTCGCATCATGTATAGCCCACTTTGTCGGAAGCCTCATTCCGCGAGATG AAGCCTTCAGTAGACCAACCACCCTTCGCGGTTCATCCGCTGTTGCTTGC TAAATTACACCCCACGCAGTCACCTTACGTACAAGTTTTTGAGCGAAGAG TTGTACGAGTATCTGGATGCTGCTATCATGGTGCAAACAAGTCCGGAGGA GGCGTACCGCAAGGTAACAGTGAGAAAACGGAAATGCTACATGCCTAATT CTCAACATCCTTTGTTGAGTCGCAGGCGTACAATAGCCTTGCGACAAGTT GTGAGCTCCCCCTGCATCTCGCCAAGTCGCATTGGATATTTCTTACAGTT GTATCGCATCGTCGTTAAGCTAGTTGAGCTGGCGAGTTTTCGTGAGTTTA TCTTCGTGTGTGTGTCGACAACTTTTGCTCAATTCCCATCGACAGTACGA CGAGCTGACATCCAAGCACATCGACCAGCTAAGGCAGTTGACGAAGCAAA TACAGGACGCTCGTATGGCGCGTGATAACGATGCTATCAAGACAAGCCTA GAGGTGAGGCGATATGGGCACGTTTTATGCGGAACATTGTCCACACATCT GGCACGACACCGTGTAATACAATTGTATGCGCCCATACGCCGAAGTTCAA GGCCAGGTGTAGAACTACTGCTGTAGGGAGCCTGTGTTGGGCAGATGACA ACTCAATTTTTGGCCCAAATATCGTATTGTTGTTGCGCTGAAGGGGATCC ATTTTGCGTGGTTGACGGCACAACTCCGGGACATGTGGAGAAAAAGTGAG CATGACCAGCGCACAACAAAGTCTGTTGCGGGCAACATGGAAAACGATTA CCCATTTAGATATTGGTTGGCTCTTACTTTGTTTGTAATGCTAGTTTCTG ACCTCCAGGACAAGTTCTACCTCGCGCTGATCAAACTTAGATTGGTGACC TCACTTCCCGATCCTCCGTACTCAACGGCTGGCAGATGTACGATGCAGCG CTTGAGCGCTACATCCCGGTGTTGATGGCAATGGCTAGAATATACTGGGA CAGGGAAAATTATCCTATGGTCGAGAAGCTTTTCAGGCAGGCCGCGGAGT TCTGCTCAGATCACGACACTTGGAAGCTGAACGCAGCCCACGTCTTTTTC ATGGAGGAAAAATTTAAGGTGCGGCCGTCGCTTCTCTCTTGTGTTCCTCC ATCCGAATGCCAGCTTGTATGCTTGTACCATCTTGCAGGAGCGCTTTTCA TGTCGAATGCTGGAAGACTTTCGGGACTTCCCTAATTCCTAACACGCTTT TCTTGTGCAGGAGGCTATCCGCTACTACGAGCCAATTGTGAAGAAGCAGG CCGACACCATCCTAGAGGTTCCTGCAATTGTTCTAGCAAACCTTTGCGTG AGCCACATAATGATCAGCCAAAACGAGGAGGCGGAGGAACTCATGCGAAA GGTGGGCGATATCTTCAGCTTTGACCACAAGTCCGAGGGCATTAAATCGT TGCTTACAATACAAAACACATGTCTTGTTCTACGCGCCAGGGATCATGTG GTCCGATGACGATATCGTGTTATCGATGTTAACATTGCAGCTCCTCCCGT TCTGATGCAGATTGAAAAAGAGGAGGAAAAGGTGGCGCAGCAGGACCCTG ACAAGCAGTGCTTTCACCTTTGCATAGTAAACTTGGTGATCGGCACATTG TACTGCGCCAAGGTGAGCATATTTGTGCGGGCTTCTCTGCGCGAGCGCTT GCCTCCATTTCTCCCTAGTTGGACCCAACTCGTCCAACTTTCAATCGTAG TCGATTTCCTGGAGAGCTGCTTTCTCTTGCTTGAAAACGAAGTTTCTTTA CTTCTATGAATGAAAACATGGCGTATTTTGTCTGAAGAGCTATGTCCAAC AATCTACCTATGTACACGTGTGCGATACGTGATACTCGAATCCTACTGTC CGGGTGACTGGGTGGTGCTAAAGGAACGTATATAGGCCACTCCACGATCA AGATCTGATGAACCACGGTTTCCAGACAGCTAAAAATGAAGATTCCGACT TAACACAGGGGAACTTCGAGTTTGGAATCAGTCGCATCATCAAATCGTTG GAGCCTTACGAGAAGAAACTCGGAACGGACACGTGGTTCTACGCAAAGAG ATGCTTTTTAGCGCTGGCCGAGCAGGTGATCTTTCAGCAGCAGTGCCTTT GTTTTAAGATTAAGAATTTACCGGAGAAGGCGTCTGGTACGTAGCTCCTC TTTGATAAACTTCTGGTATTCCGATTTCGTCCGTCAAGCGTCTGACTTTG GTATGCAATAGAGTTGATTCCACAAATAGGCCGCTCTGGCATCATTGTGG TGCTGTGCCCAGTTGATACCCAGGTGTTCCCCTCAACACAGCGTCACCGC TTGTTTGTCAAAGTAGTCAAACATCATCTTGTCGTGGATTATGTTTATGT CGTGCCTTCTCCGCACCCCTTTTGTTCCAGATGTCCAAGCATACGCTTAT GCTGAAGGATGCCTCCCTGTACGAGATCATCGCTTTCCTCGACGCTGCAG ATCAGCATGGACACAGCATCCCGACGCAAATAGGACCGCAGGTACGACAT TTGAAACTTGGTTTGTAACTCCCAGAGAAACGACGGAGGGTTTGCTGGAA AAACGAGTTGTATGGGTCGTATGGATGACGTAAACCATTCACCCTTCACA CAGAAACGTCGAAATCCGATGTGGTTGATGCACTCCTCCGATTCCAGTCG AAGCTGTATACCGTAATCATGCATGAGATGGCACCCATCGGAGAGATGGC ACCAGGGTGCGAGAAAAAAAGAAAGAAAGAAACGTTCAATTATATTTTCG CACCCCCATTGGAGAGATGGCACCGGGTGCGATCTCAACGATGAAAATCC AAGAGTGAGTGCTACCGCGAGCCTATGCGGTGACACCAGGGCGCCACTCC TCTCGCGTACCGCTAATACGTGTGTTCTTTCGATGCTGTTCCCGAGAGGA AATTAGTCAAGTTGTTTTCATTTAATCGGTACAAATATGGAAATTGTACG CTCTCAACTAAGCCAACAATACACAGGCCGTTTGTTGCCCAGTAAGGCCG TTTTTATTTACCAATTCGGCATCGCACCCATCGGAGAGATGGCACCGGGG GTGCCTTGCAAAACCTTAATATAATGATTTGATTGCATTATCGCACCGGT ATGCGTGAGATGGCACCAGGGTGCACAAAAAAATACAATAAATAAATATT TGAAAACCCGATCGCACCCGGTGCCATCTCACGCATGATTGCGGTAGTAA AAGGACCACCATTTGGTTGCCTAGATGTTCCCATAATCAACATATTAAAC ATATATTTTGCTGTTGTTCTCTGTTTGTTCAATGCCGTTAAACTCTTTAC AGGTTGACCCTGGCGGCAAGCACACGCCGACGAAATGGAACTGTACAGTG AGCTACGAAACACGCCAGTTGAAAAAAATCTACCTCAAATTGCGAGATTG AGTGGATCAAGAACACGACTTGAAAAACCACGTTGCTTCGTGTGTTATTC GTACTAGGAAACTGCGTTGATGTACATTGATTCGCATTTGATGCAACCAT TGTGTTGCGCGTAGTTGACGATCTTGGTTGTTGTTGACGTCAGTCAATGG GTCTGGAATGGGTCTTTTGGCGTTGGGATACGATTGTGTTGTTGTTGTTG TCTTCACATAAAAAACCATCCCGATCTCTC
back to top

Coding sequence (CDS) from alignment at C-linearis_contig107:118150..126229+

>mRNA_C-linearis_contig107.1025.1 ID=mRNA_C-linearis_contig107.1025.1|Name=mRNA_C-linearis_contig107.1025.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3858bp|location=Sequence derived from alignment at C-linearis_contig107:118150..126229+ (Chordaria linearis ClinC8C monoicous)
ATGTCGACAACTGCCATCGTTTATGAAGCAATCAAGGATGGGCGCTTTCC
CGAGGCGGTGCATCTCCTCACTTCCGAGCTCGGGATGTCGACAACTGCCA
TCGTTTATGAAGCAATCAAGGATGGGCGCTTTCCCGAGGCGGTGCATCTC
CTCACTTCCGAGCTCGGGAACTTTCCGCGGAACAGGGCGGCATTGTCTCT
GTTGAGTTACTGCTACTACCAGATGCAAGACTACAAAGCAGCAACCACCA
TGTACGAACAACTCGTGAAGGTCTGCCCCAGCGTCGAAGAGTACAAGAAC
TTTCCGCGGAACAGGGCGGCATTGTCTCTGTTGAGTTACTGCTACTACCA
GATGCAAGACTACAAAGCAGCAACCACCATGTACGAACAACTCGTGAAGG
TCTGCCCCAGCGTCGAAGAGTACAAGGTGTATCTCGCACAATCGCTATAT
AAGGCTGGCATGTATCCGGAGGCGACGAGAGCCGCAGTGCGAGTCGACAG
TACACAGTATCAGCAGAGAATGATTGCACTTCAGGTGTATCTCGCACAAT
CGCTATATAAGGCTGGCATGTATCCGGAGGCGACGAGAGCCGCAGTGCGA
GTCGACAGTACACAGTATCAGCAGAGAATGATTGCACTTCAGGGGGGCAT
CAAGTACGAGCAAGACGAGCTAGCAGCATGCAAGAGTCTTGTCGACCAGT
GCCTGAGCGATGATCCGGACACCATAATCAGTTATGCGTCGATTTCCTTC
AAAGAACAAGGGGGGCATCAAGTACGAGCAAGACGAGCTAGCAGCATGCA
AGAGTCTTGTCGACCAGTGCCTGAGCGATGATCCGGACACCATAATCAGT
TATGCGTCGATTTCCTTCAAAGAACAAGACTATGACGACGCCAGGCTAAA
ATACGCGGACGCCATGCACACTCTCGGGTACCAGGCAGATCTCGCCTACA
ACACCGCGCTATGCTACTTCAAGGACAAGCAGTACGGCCCTGCATTGAAA
CATGCCGACTATGACGACGCCAGGCTAAAATACGCGGACGCCATGCACAC
TCTCGGGTACCAGGCAGATCTCGCCTACAACACCGCGCTATGCTACTTCA
AGGACAAGCAGTACGGCCCTGCATTGAAACATGCCGACGAGATCATCGAG
AAAGGAGTACGTGAACATCCAGAGCTGTCCGTCGGTAGCAACACAGATGG
AATCGATGTACGATCTGTCGGCAATTCACAGGTTCTGCAGACGAGATCAT
CGAGAAAGGAGTACGTGAACATCCAGAGCTGTCCGTCGGTAGCAACACAG
ATGGAATCGATGTACGATCTGTCGGCAATTCACAGGTTCTGCAGGAAACT
TGTTTGGTTGAGGCGTTCAACCTACGGGCAGCCATTGAGCACACAAGGAA
AAACTACGAAATGGCGGCGGAGGCCCTCAGCGACATGCCACCTCGGAGAG
AACAAGAGCTGGACCCTGTAACCCTCCACAATCAGGAAACTTGTTTGGTT
GAGGCGTTCAACCTACGGGCAGCCATTGAGCACACAAGGAAAAACTACGA
AATGGCGGCGGAGGCCCTCAGCGACATGCCACCTCGGAGAGAACAAGAGC
TGGACCCTGTAACCCTCCACAATCAGGCCCTTTTGCACATGGAGGATGAC
CCAACAGCAGGTTTTCGCAAGCTTAATTTCCTGCTGTCCAACCCACCGTT
TCCGCCGGAGACATTCGGCAACCTACTCCTGTTGCACTGCAAATACGGGT
ACCACGAACTGGCCGCAGACATCTTGGCAGAAAACAGGCCCTTTTGCACA
TGGAGGATGACCCAACAGCAGGTTTTCGCAAGCTTAATTTCCTGCTGTCC
AACCCACCGTTTCCGCCGGAGACATTCGGCAACCTACTCCTGTTGCACTG
CAAATACGGGTACCACGAACTGGCCGCAGACATCTTGGCAGAAAACAGTC
ACCTTACGTACAAGTTTTTGAGCGAAGAGTTGTACGAGTATCTGGATGCT
GCTATCATGGTGCAAACAAGTCCGGAGGAGGCGTACCGCAAGTCACCTTA
CGTACAAGTTTTTGAGCGAAGAGTTGTACGAGTATCTGGATGCTGCTATC
ATGGTGCAAACAAGTCCGGAGGAGGCGTACCGCAAGTACGACGAGCTGAC
ATCCAAGCACATCGACCAGCTAAGGCAGTTGACGAAGCAAATACAGGACG
CTCGTATGGCGCGTGATAACGATGCTATCAAGACAAGCCTAGAGTACGAC
GAGCTGACATCCAAGCACATCGACCAGCTAAGGCAGTTGACGAAGCAAAT
ACAGGACGCTCGTATGGCGCGTGATAACGATGCTATCAAGACAAGCCTAG
AGATGTACGATGCAGCGCTTGAGCGCTACATCCCGGTGTTGATGGCAATG
GCTAGAATATACTGGGACAGGGAAAATTATCCTATGGTCGAGAAGCTTTT
CAGGCAGGCCGCGGAGTTCTGCTCAGATCACGACACTTGGAAGCTGAACG
CAGCCCACGTCTTTTTCATGGAGGAAAAATTTAAGATGTACGATGCAGCG
CTTGAGCGCTACATCCCGGTGTTGATGGCAATGGCTAGAATATACTGGGA
CAGGGAAAATTATCCTATGGTCGAGAAGCTTTTCAGGCAGGCCGCGGAGT
TCTGCTCAGATCACGACACTTGGAAGCTGAACGCAGCCCACGTCTTTTTC
ATGGAGGAAAAATTTAAGGAGGCTATCCGCTACTACGAGCCAATTGTGAA
GAAGCAGGCCGACACCATCCTAGAGGTTCCTGCAATTGTTCTAGCAAACC
TTTGCGTGAGCCACATAATGATCAGCCAAAACGAGGAGGCGGAGGAACTC
ATGCGAAAGGAGGCTATCCGCTACTACGAGCCAATTGTGAAGAAGCAGGC
CGACACCATCCTAGAGGTTCCTGCAATTGTTCTAGCAAACCTTTGCGTGA
GCCACATAATGATCAGCCAAAACGAGGAGGCGGAGGAACTCATGCGAAAG
ATTGAAAAAGAGGAGGAAAAGGTGGCGCAGCAGGACCCTGACAAGCAGTG
CTTTCACCTTTGCATAGTAAACTTGGTGATCGGCACATTGTACTGCGCCA
AGATTGAAAAAGAGGAGGAAAAGGTGGCGCAGCAGGACCCTGACAAGCAG
TGCTTTCACCTTTGCATAGTAAACTTGGTGATCGGCACATTGTACTGCGC
CAAGGGGAACTTCGAGTTTGGAATCAGTCGCATCATCAAATCGTTGGAGC
CTTACGAGAAGAAACTCGGAACGGACACGTGGTTCTACGCAAAGAGATGC
TTTTTAGCGCTGGCCGAGCAGGGGAACTTCGAGTTTGGAATCAGTCGCAT
CATCAAATCGTTGGAGCCTTACGAGAAGAAACTCGGAACGGACACGTGGT
TCTACGCAAAGAGATGCTTTTTAGCGCTGGCCGAGCAGATGTCCAAGCAT
ACGCTTATGCTGAAGGATGCCTCCCTGTACGAGATCATCGCTTTCCTCGA
CGCTGCAGATCAGCATGGACACAGCATCCCGACGCAAATAGGACCGCAGA
TGTCCAAGCATACGCTTATGCTGAAGGATGCCTCCCTGTACGAGATCATC
GCTTTCCTCGACGCTGCAGATCAGCATGGACACAGCATCCCGACGCAAAT
AGGACCGCAGGTTGACCCTGGCGGCAAGCACACGCCGACGAAATGGAACT
GTACAGTGAGCTACGAAACACGCCAGTTGAAAAAAATCTACCTCAAATTG
CGAGATTGAGTTGACCCTGGCGGCAAGCACACGCCGACGAAATGGAACTG
TACAGTGAGCTACGAAACACGCCAGTTGAAAAAAATCTACCTCAAATTGC
GAGATTGA
back to top