mRNA_C-linearis_contig106.993.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI) HSP 1 Score: 915 bits (2365), Expect = 0.000e+0 Identity = 428/589 (72.67%), Postives = 489/589 (83.02%), Query Frame = 1
Query: 811 PAQVSALYDTALTFDPPVVGYPTEITFTFTPLYGISAGKFIRLHLPGFTTGERKGTAGEDLGFNNEDDSGNYGLAWPSDTFRGWWSEGTPEQEYEDSLFNLYTSQTLVSGVSYTAIIDRSTSIKSNCGHPVDDPLFYAWVDDETTFYKIFGKVDYPIQAIQEIPMSCYMAPTSLKFDPPLPKTLMHITVGFQPARDLAAGDTVTVNLKGFTSGEADGVAGGDFAMGAVLL-----DGSDWLAEWEEGGYLDGEPGFEDSILRLQAAAAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSDPPWDATGEFTYTQTVGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLV------------DATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQACDKK 2526
PAQ ALYDT L+FDPP VGYPTE+TFTFTP Y I+ GKFIRL L GFT GER GTAGED GF NE+D GN+G WPSDTFRGWWSEGTPE+EYEDS+F+LYT++TL + +SYTAIIDR + +KS+CGHP D FYAWVDD TTFYK+FG+VD+ I+ + IPMSCY+AP +L FDPPLP+T+ HITVGFQPARDL GD VTVNLKGFTSGE +G G DF G +LL +GS WLA WEEG Y++GE G+EDS+LRLQA A IPAGELHEV +YRSNGI+AQCGM EN T+STISVVSSSDPPW++TGEFT++Q VGPGC ELNYCSGQGECDYC QRCDCPEGFGS +EL + D+ARDCS++TCPSGVSW PVLAG PRPDP+ SH MAECSNMGTCIRSFGICLC+ G+ GRACERYACP CSGNGACR+MREMG+M A PLV D+ G EVVYGWD+PEG++TW+SRSVFGCVCDSSWEVGLG GQTQ+A+YFGPDCSMLHCP+G+DPDT DETDCE+ A GGRGVG+AGNLCHVDCSNRGICDY G CSCFDGYHGQA ++
Sbjct: 4 PAQ--ALYDTKLSFDPPEVGYPTEVTFTFTPTYSITEGKFIRLILAGFTRGERNGTAGEDFGFANEEDEGNFGFGWPSDTFRGWWSEGTPEEEYEDSVFSLYTTKTLDADISYTAIIDRMSGLKSSCGHPADHSAFYAWVDDTTTFYKMFGQVDWTIEETEAIPMSCYVAPATLTFDPPLPQTMTHITVGFQPARDLVEGDNVTVNLKGFTSGEGNGTEGRDFLHGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVYRSNGIRAQCGMGENETTSTISVVSSSDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHAPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSVFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQASQQR 590
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A6H5KP52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP52_9PHAE) HSP 1 Score: 750 bits (1937), Expect = 1.420e-262 Identity = 368/584 (63.01%), Postives = 430/584 (73.63%), Query Frame = 1
Query: 979 AGEDLGFNNEDDSGNYGLAWPSDTFRGWWSEGTPEQEYEDSLFNLYTSQTLVSGVSYTAIIDRSTSIKSNCGHPVDDPLFYAWVDDETTFYKIFGKVDYPIQAIQEIPMSCYMAPTSLKFDPPLPKTLMHITVGFQPARDLAAGDTVTVNLKGFTSGEADGVAGGDFAMGAVLL-----DGSDWLAEWEEGGYLDGEPGFEDSILRLQAAAAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSDPPWDATGEFTYTQTVGPGCLELNYCSGQ-GECDYCLQRCD--CPEGFGSLTELE-------VSTDIARDCSQLTCPSGVSWTPVLA-------------GYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACER----------------YACPNACSGNGACRSMREMGLMPAATPLV------------DATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQACDKKQGDGYGFNTAGL 2562
AGED GF NE+D GN+G WPSDTFRGWWSEGTPE+EYEDS+F+LYT++TL + VSYTAIIDR + +KS+CGHP + FYAWVDD TTFYK+FGKVD+ I+ +EIPMSCY+AP +L FDPPLP+T+ HITVGFQPARDL AGD VTVNLKGFTSGE +G G DF G +LL +GS WLA WEEG Y++GE G+EDS+LRLQA A +PAGELHEV +YRSNGI+AQCGM EN T+STISVVS+SDPPW++TGEFT++Q VGPGC ELNYCSGQ G + R C E F + +D + P+ P+++ PRPDP+ SH MAECSNMGTCIRSFGICLC+ G+ GRACER YACP CSGNGACR+MREMG+M A PLV D+ G EVVYGWD+PEG++TW+SRS+FGCVCDSSWEVGLG GQTQ+A+YFGPDCSMLHCP+G+DPDT DETDCE+ A GGRGVG+AGNLCHVDCSNRGICDY G CSCFDGYHGQAC+ KQ DGYGFNT GL
Sbjct: 2 AGEDFGFANEEDEGNFGFGWPSDTFRGWWSEGTPEEEYEDSVFSLYTTKTLDADVSYTAIIDRMSGLKSSCGHPANHSAFYAWVDDTTTFYKMFGKVDWTIRETEEIPMSCYVAPATLTFDPPLPQTMTHITVGFQPARDLVAGDNVTVNLKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPVPAGELHEVTVYRSNGIRAQCGMGENETTSTISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQVGRAIHLSFRSKIVCDESFTMGVGRRKCGKRPAILQPNGKDMGLVASPANSGSDPLVSFPFCRPSTAVAASRSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDMQPSVSQPKYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSMFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQACNSKQSDGYGFNTVGL 585
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A7S3NPL4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPL4_9STRA) HSP 1 Score: 338 bits (866), Expect = 1.130e-101 Identity = 214/585 (36.58%), Postives = 309/585 (52.82%), Query Frame = 1
Query: 877 TEITFTFTPLYGISAGKFIRLHLPGFTTGERKGTAGEDLGFNNEDDSGNYGLAWPSDTFRGWWSEGTPEQEYEDSLFNLYTSQTLVS---GVSYTAIIDRSTSIKSNCGHPVDDPLFYAWV----DDETTFYKIFGKVDYPIQAIQEIPMSCYMAPTSLKFDPPLPKTLMHITVGFQPARDLAAGDTVTVNLKGFTSGEADGVAGGDFAM-----GAVLLDGSDWLA--EWEEGG-YLDGEPGFEDS--ILRLQAAAAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSD---PPWDATGEFTYTQTV-------GPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPN------ACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCED---AVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQACDK 2523
TEI + GI I L+L GFT+GE + AG ++ D GN L WP + W+EG+ E EY DS L +Q VS G + IID S I+ NC PV+ V D + + + D + SCY+ +L F P +P+ I + F+ + L AGD + + L G+TSG+ADG+AG + + GAVL + W EG Y PGF +S I ++++ +I AG L E+ + R+ I+AQCGM + +I ++ +++ ++ + + +TV G GC LN+C+G G CDYCL RC+C E +G+ E C + +CP G +W P+P+ T+AECSN G C R+ G C C GF G ACER +CP CSG+G+C ++ E+ + A PL S + P ++TWD+ + CVCDSSW VGL G++ ++E+FGPDCS+ HCPSG+DP T DETDC + + +GG +G G+ CH+DCSNRGICDY G C+CF+G+ G AC+K
Sbjct: 49 TEIRLSLIVDGGIQRSDEIYLYLGGFTSGECENGAGGNI------DMGNI-LLWPRSEWEASWTEGSVENEYSDSYL-LIQAQGRVSTALGYRHEIIIDSSNGIRPNCYIPVNSSSMQIAVLAANDTSSAQTRQVNRSDGVLA-------SCYLTNVALTFRPAVPRATSTIDIAFKSSVVLEAGDQIILKLSGWTSGKADGIAGNNIPVLALQDGAVLTGNTSAYVTGSWYEGCCYQKNLPGFSNSTIIFQIRSGISITAGTLVEL-VVRNGQIRAQCGMPAPYSEQSIRILKAANIFTQLYNDSSPYNIPETVISSATIVGDGCNSLNFCNGHGTCDYCLNRCECYENYGAPYEAMYRQLSDWTCEEKSCPYGPAW----GAMPKPNESPHGTIAECSNAGLCKRTTGKCSCFAGFEGSACERKSCPGNKADTGVCSGHGSCATITELATLSDALPLSSNLNRSYDFTAAEFP--TNTWDAYRLTACVCDSSWPVGLDQGESDKSEWFGPDCSLRHCPSGDDPMTRRDETDCYNVSTSTLLGGSALGKNGSKCHIDCSNRGICDYETGICNCFNGFGGPACNK 611
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A7S3XTV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTV6_HETAK) HSP 1 Score: 303 bits (775), Expect = 2.000e-91 Identity = 172/399 (43.11%), Postives = 219/399 (54.89%), Query Frame = 1
Query: 1399 LAAGDTVTVNLKGFTSGEADGVAGGDFAMGAVLL-DGSDWL--AEWEEGGYLDGEPGFEDSILRLQAA-AAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSDPPW-------DATGEFTY---TQTVGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPN----ACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGW----DTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTED-DETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQACDKK 2526
+ GD VTVNL GFT+G G D +MGAV+ G + L +W EG ++ E GF +S LR+ + AG+ + + RS GI+AQCG + + P W A TY T+ VGPGC L+YCS G CDYCLQ+C C EGFG+ T++ DI+ DCS+ CP+G P P D H ECS G C R+ G CLC G+ GRACER+ CP+ ACSG+G C M+++ A PL + + + W D S WD+ GCVCDSSWEVGL + QTQ AE+FGP C + CPSG+DP T + DE DCE A GGRGVG GN CH +C+ RG CDY G CSCF G++G C K
Sbjct: 1 MTEGDLVTVNLGGFTTGNLS-TNGSDLSMGAVVFASGYNPLFGGQWTEGEFVSQEMGFYNSTLRVTLLNTSYAAGDTVSIIVARSTGIRAQCG------------IDGATPHWWLKVEAAAANTSLTYFDTTEAVGPGCRHLSYCSDAGTCDYCLQKCTCYEGFGATTDI-ADIDISLDCSEKVCPAG----PAFGHLPASSTDG-HAPRECSAAGACNRNTGECLCFTGWWGRACERHECPSSEGIACSGHGRCFKMKDLAKFSDAMPLSNRNTSNATIEYWGMDADGTLADSVWDAEMGSGCVCDSSWEVGLESNQTQAAEWFGPACELRRCPSGDDPMTSEIDEEDCEGVAAAGGRGVGKEGNRCHHECAGRGTCDYTAGLCSCFPGFYGHNCALK 380
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.990e-86 Identity = 150/313 (47.92%), Postives = 188/313 (60.06%), Query Frame = 1
Query: 1609 GELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSDPPWDATGEFTYTQTV------GPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTE-LEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQACDKK 2526
G L+E IYR NGIK CG+ EN I +SS ATG F ++ G GC L+ C G+G CD+C Q C C EG+G T+ + I+ DCS+ CP ++ V D++H +AECSN G C R+ G C C GF G AC+R +CPN CSG+G C SM E+ AA PL A + YG+ P + +WD+ S+ CVCDS W VGLG GQTQ E+FGPDCS+ HC SG+DP+T+ DET C + A GGRGVG AGN CHVDCSNRGICDY GEC+CF G++G C K
Sbjct: 10 GSLYEFIIYRQNGIKLYCGIGENDPDLKIRWGNSSL----ATGWFGEWMSIQSSTRAGSGCTALSDCHGRGVCDFCKQTCVCYEGYGKDTDTITAGGTISVDCSERVCPYAKAFGDVPYST-----DSAHQLAECSNNGICERTSGSCQCFPGFEGDACQRRSCPNDCSGHGQCLSMAELVNAAAAHPLTAA----DTTYGFSAPVSAQSWDAESLQACVCDSRWTVGLGPGQTQTGEWFGPDCSLQHCSSGDDPETKVDETACFNKTAPGGRGVGEAGNRCHVDCSNRGICDYSTGECACFQGWYGSNCGAK 309
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A7S1UJF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF5_9STRA) HSP 1 Score: 285 bits (729), Expect = 1.110e-83 Identity = 160/392 (40.82%), Postives = 207/392 (52.81%), Query Frame = 1
Query: 1357 TLMHITVGFQPARDLAAGDTVTVNLKGFTSGEADGVAGGDFAMGAVLLDGSDWLAEWEEGGYLDGEPGFEDSILRLQAAAAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSDPPWDA--TGEFTYTQTVGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCEDAVAVGGR---GVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQAC 2517
T + I + F A AG +T+ L T G DG G + + + + W EG Y +P + D+ L L A+ A +KI NG CG+ EN +S +D A T E VGP C C G G CD C +C C +G+GS +++ + DCS+ CP G +W V G A+H AECSN G C R+ GIC C GFGG AC++ CPN CSG+G C +M E+G + A PLV S VYG E ++ WDS CVCDSSW VGL +G+TQE E+FG DCS+ CP+G+DP T ETDC VGG GA+GNLCHVDCSNRG CD+ G C+CF+G+HG+ C
Sbjct: 81 TELQIDLEFDFALSAGAGSKITIALPRMTCGAGDGTPGTPPST-IQMTHTTYFTPTWTEGTYSYADP-YPDTKLELVVDRAMAANTQLSIKIDADNGFMFHCGINENEGIK----ISVTDDALGALVTDELMDHTMVGPACTNKGTCFGHGTCDACRDKCVCDDGYGSTSDV-YEIYVFPDCSERVCPKGRAWGDVPTGA-----TAAHADAECSNRGVCDRTTGICACVAGFGGEACQKKLCPNDCSGHGLCMNMHELGGISRALPLVS----SSQVYGSSANEATTAWDSLLNMACVCDSSWSVGLASGETQEPEWFGADCSLKRCPTGDDPMTSAVETDCSGVAPVGGSTTGATGASGNLCHVDCSNRGKCDHTLGTCTCFEGFHGENC 456
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A7S2G565_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G565_9STRA) HSP 1 Score: 285 bits (729), Expect = 2.300e-83 Identity = 158/406 (38.92%), Postives = 223/406 (54.93%), Query Frame = 1
Query: 1324 TSLKFDPPLPKTLMHITVGFQPARDLAAGDTVTVNLKGFTSGEADGVAGGDFAMGAVLLDGSDWL-AEWEEGGYLDGEPGFEDS--ILRLQAAAAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSSDPPWDATGEFTYTQTVGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTE--LEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLV--DATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTED-DETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQAC 2517
TSL ++P T + I + F PA ++ D V V+L FTSG+ G + G+ + ++ W+EG + F +S +R++ + AG + I +++GIK CG+ EN + +S +A ++ +G C L CS G CD+C Q C+C EGFG++ + + IA +C+ TCP G ++ V G A+H ECSN G C R+ G C C +G+ G AC+R CPN CSG+G C ++ E+ A PL D + YG + + +WD + CVCDSSW VGL AG+ Q +E+FGPDCS+ HCP G+DP TE DETDC VA GGRG G+ GNLCHVDCSNRG CD++ GEC+CF G+ G C
Sbjct: 79 TSLYYEPNELCTPVEIQIQFVPAFTVSGSDLVKVSLPRFTSGDCKQTKGANIDYGSFYHSLTTFVDMRWDEGDWDYSSMPFANSSITMRVKEGMQLMAGTTYTFVIMKASGIKIYCGLEENWEKLMLWTNASGSTSRNAPVSVAISEQIGDACENLKLCSEHGTCDHCKQVCECDEGFGAVNDSVTKGGYPIAINCAMRTCPLGPAYADVPYGM-----YAAHQDTECSNNGLCDRAEGFCECFDGWEGDACQRRPCPNDCSGHGRCLTLEELANEKEALPLTHQDPAGANLYRYGTVSEMRNKSWDHATFSACVCDSSWGVGLDAGEKQHSEWFGPDCSLRHCPGGDDPGTETVDETDCGGKVAAGGRGTGSTGNLCHVDCSNRGKCDHMTGECTCFLGWTGSDC 479
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A7S2WUH0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUH0_9STRA) HSP 1 Score: 279 bits (714), Expect = 1.000e-81 Identity = 173/427 (40.52%), Postives = 220/427 (51.52%), Query Frame = 1
Query: 1312 YMAPTSLKFDPPLPKTLMHITVGFQPARDLAAGDTVTVNLKGFTSGEADGVAGGDFAMGAVLLDG--SDWLAEWEEGGYLDGEPGFEDSILRLQA--AAAIPAGELHEVKIYRSNGIKAQCGMAENGTSSTISVVSSS---DPPWDATGEFTYTQTVGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVST---DIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTED-DETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQACD-----KKQGDGYG 2544
Y+ TS++ L ++ + + F P L D + V+L FT G A G G GA+L + +LA W EG + F + L LQ ++PAG+ EV+IY GI+A CG + I +S D G T VG GC L CSG G CD+C QRC+C EG+G + D A DC+ TCP P + P A + EC G C R+ G C+C G+ G AC+R CPN CSG+G C +M E+ P A PL + GS +YG + WD F CVCDSSWEVGLG+GQ Q EYFGPDCS+ CP G+DP T DETDC + A G RG G GNLCHVDCS RGIC++ G C+CF+GY+G C KQ DG G
Sbjct: 24 YLDETSIRLSNSLVGAVLSLKLRFIPKITLNGTDEIYVSLPRFTRGNARGQPG---PSGALLQFSRTTRFLATWNEGSFDHSAMPFAQTNLTLQVRPGESMPAGDPVEVEIYEEEGIRAHCGFPADWEEIRIGTNASGTLGDNGQVMLGRVEQTGFVGSGCSWLLDCSGHGVCDHCKQRCECFEGYGGSLAGGAAPPPMDAAPDCTSRTCPVA----PAVRSMPSTASIAHAQLLECGGNGKCDRASGECVCALGWQGEACQRRRCPNDCSGHGRCLAMEELAATPEALPL-SGSNGS--MYGSLDRRATKAWDFDKAFACVCDSSWEVGLGSGQVQGPEYFGPDCSLRRCPGGDDPRTPGVDETDCSNKSADGFRGRGQPGNLCHVDCSQRGICNHGTGTCACFEGYYGHNCGLVSAMAKQQDGDG 440
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP) HSP 1 Score: 267 bits (683), Expect = 1.500e-79 Identity = 129/253 (50.99%), Postives = 162/253 (64.03%), Query Frame = 1
Query: 1759 VGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVSTDIARDCSQLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQAC 2517
G C L+ C+ G CD + C+C EG+G+ T++ + + DCS TCP+G SW G P SH AECS+ G C RS G C+C G+ G AC+R CPN CSG+G C SMRE+ +A PL AT YG D ++TWD + GC+CDS W VGLGAG++Q +++FGPDCS +HCPSG+DP T +DETDCE VA GG G GAAGNLCHVDC+NRGICDY G CSCF G++G C
Sbjct: 31 TGNLCAALSNCNAHGRCDALTKTCECNEGYGASTDI--TNYRSPDCSLRTCPAGPSW----GGIPT-SATTSHAKAECSDAGVCDRSTGTCMCYYGYEGSACQRSTCPNGCSGHGQCLSMRELATETSAFPLSPATT-----YGGDVT--ATTWDQDRIQGCLCDSYWPVGLGAGESQLSQWFGPDCSRMHCPSGDDPMTAEDETDCEGVVAAGGVGPGAAGNLCHVDCANRGICDYSSGVCSCFPGFYGSNC 269
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Match: A0A2P4X7I9_9STRA (EGF-like domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X7I9_9STRA) HSP 1 Score: 266 bits (679), Expect = 4.830e-79 Identity = 133/255 (52.16%), Postives = 162/255 (63.53%), Query Frame = 1
Query: 1759 VGPGCLELNYCSGQGECDYCLQRCDCPEGFGSLTELEVSTDIARDCS--QLTCPSGVSWTPVLAGYPRPDPDASHTMAECSNMGTCIRSFGICLCQEGFGGRACERYACPNACSGNGACRSMREMGLMPAATPLVDATAGSEVVYGWDTPEGSSTWDSRSVFGCVCDSSWEVGLGAGQTQEAEYFGPDCSMLHCPSGNDPDTEDDETDCEDAVAVGGRGVGAAGNLCHVDCSNRGICDYLKGECSCFDGYHGQAC 2517
G C LN C+ G CD + C C EGFG+ T+ V+ + DCS TCP+G SW G P SH AECS G C RS G C+C G+ G AC+R +CPN+CSG+G C SMREM + +A PL T Y D ++TWD + GC+CDSSW VGLGAG++Q A+YFGPDCS +HCPSG+DP T DETDCE +A GG G GAA NLCHVDC+NRGICDY +GECSCF G++G C
Sbjct: 24 TGNLCASLNNCNAHGRCDALTKTCTCYEGFGAPTD--VTNYRSPDCSLRTRTCPAGPSW----GGIPT-SATTSHPKAECSGAGICDRSSGTCICYYGYEGSACQRSSCPNSCSGHGQCLSMREMAMESSAFPLSPPTK-----YEGDVT--ATTWDQDRIQGCLCDSSWPVGLGAGESQLAQYFGPDCSRMHCPSGDDPMTAVDETDCEGIIAAGGGGTGAADNLCHVDCANRGICDYSRGECSCFPGFYGSNC 264 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig106.993.1 >prot_C-linearis_contig106.993.1 ID=prot_C-linearis_contig106.993.1|Name=mRNA_C-linearis_contig106.993.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=855bp MGAAAAVAVPPSWLKSNSGADLLLLAAGVRGDSSGSGAGRSSATRTRSLSback to top mRNA from alignment at C-linearis_contig106:342861..351934+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig106.993.1 ID=mRNA_C-linearis_contig106.993.1|Name=mRNA_C-linearis_contig106.993.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9074bp|location=Sequence derived from alignment at C-linearis_contig106:342861..351934+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig106:342861..351934+ >mRNA_C-linearis_contig106.993.1 ID=mRNA_C-linearis_contig106.993.1|Name=mRNA_C-linearis_contig106.993.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5130bp|location=Sequence derived from alignment at C-linearis_contig106:342861..351934+ (Chordaria linearis ClinC8C monoicous)back to top |