mRNA_C-linearis_contig106.984.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig106.984.1
Unique NamemRNA_C-linearis_contig106.984.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: D7FSQ9_ECTSI (DOT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSQ9_ECTSI)

HSP 1 Score: 475 bits (1223), Expect = 6.260e-154
Identity = 295/443 (66.59%), Postives = 330/443 (74.49%), Query Frame = 3 
Query:  177 LPGSPAPAAKRGSGSGNPLSPPPRTPESRISSANAQSPS--GGVVDRRQLFDGDSSXXXXXXXXXXXXXPTSTARRPR-SESKTPAKRGTPKDVTAMRQGGGGDWNGXXXXXXXSVTPRKKKK---AADGTVRTLSMXXXXXXXXXXXXXXXXXRSASKKGAFGRTADGPPTKESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKDEGNSKVKVKVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAAGLKTERIAEVDPFFAEGVKLCRE-GRQDGSDLAEHVEATFQRNTSGGVKTRRSRRAS 1484
            +P SP+PA +R S    P+SPPPRTPES  S+A  +SPS  GG+VDRRQLF G   XXXXXXXXXXXXX        R ++SKTPAKRGTPKDV  MRQGG G+   XXXX   S TP KKKK   A +G VRTLSM                  +  K+GAFGR  DG P K  V +P EV RVY+++ KATG IGGNGS GAIYGELT GGMQKVVNVLKE  GFDE SSFIDVG+GLGKPNFHVAQDPGVEISYGLELE VRWELS++NHR VL+DEG++ V   V+KHNLFFA GDIL C+TFDPFTHVYMFDIGFPPATL EI  KFN+S+ARHLVSYQ+PKKV + Y FDVD V +  L LTGS EG TMYL+RRK V  GLK ERI EVDPFFAEGVKLCR  G   GS+L  HVE  F+RNTSGGV+TRRSRRA+
Sbjct:   34 VPRSPSPAKQRKSAV-IPMSPPPRTPESVSSTAVVESPSAGGGMVDRRQLFGGAGXXXXXXXXXXXXXXXXXXXXXGRRAQSKTPAKRGTPKDVKVMRQGGDGEXX-XXXXGGESATPSKKKKTEAALEGPVRTLSMTP----------------TKKKRGAFGRK-DGTPMKARVDVPEEVSRVYAIVAKATGNIGGNGSDGAIYGELTVGGMQKVVNVLKEHTGFDEMSSFIDVGAGLGKPNFHVAQDPGVEISYGLELEVVRWELSIANHRMVLQDEGDNGV--HVAKHNLFFARGDILGCETFDPFTHVYMFDIGFPPATLHEIAKKFNNSKARHLVSYQVPKKVIDVYGFDVDLVLQQPLSLTGSGEGHTMYLFRRKNVEPGLKIERIDEVDPFFAEGVKLCRNRGEGGGSELTAHVEGAFERNTSGGVRTRRSRRAN 455
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A7S4QC13_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QC13_9STRA)

HSP 1 Score: 236 bits (603), Expect = 1.430e-64
Identity = 143/311 (45.98%), Postives = 179/311 (57.56%), Query Frame = 3 
Query:  627 ASKKGAFGRTADGPPTKESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLK-----DEGNSKVKVK---VSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRR---------KGV--------AAGLKTERIAEVDPFFAEGVKLCREGRQDGSDLAEHVEATFQRNTSGGVKTRRSRRAS 1484
            A K+ AFG TA       ++  P  VKRVY ++N+ TG+IGGNG  GAIYGELT G MQK+VN++K   G DENS FIDVG GLGKPN HVAQDPGV+ SYG+E+E VRW L +SN   VL+     D G S + V    +  H    A GDI + + FDPFTHVYMFDIGFPP    ++   FN S + +L+ Y  PK + E Y FD++ + +LS  + GS EG   Y+YRR         KG          AGL ++     DP FAE     RE RQ    L EH E   +R TS     R++R  S
Sbjct:  166 AKKRNAFGHTAVN-----AITYPANVKRVYQVVNRQTGSIGGNGHGGAIYGELTVGSMQKMVNMMKVHTGLDENSRFIDVGCGLGKPNMHVAQDPGVQFSYGIEMEHVRWLLGMSNLDQVLREAQRQDRGGSVLDVSGNSIIGHRCTLAHGDITEAQFFDPFTHVYMFDIGFPPRLFYQLADMFNRSSSPYLICYHGPKLMVERYGFDIELIIQLSTSMHGSSEGHMGYIYRRVQRRRRSTGKGSRKLICPTGGAGLPSD--VPCDPLFAEP---WRETRQS---LDEHAELVRERVTSSFESCRKNRTRS 463
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: B8BQJ6_THAPS (DOT1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ6_THAPS)

HSP 1 Score: 222 bits (566), Expect = 1.670e-60
Identity = 122/280 (43.57%), Postives = 168/280 (60.00%), Query Frame = 3 
Query:  678 ESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVL----KDEGNSKVKVKVSK--HNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGV-------AAGLKTERIA-EVDPFFAEGVKLCREGRQDGSD-----LAEHVEATFQRNTSGGVK 1460
            +S+ +P  V RVY+++NK TG+IGGNG  GAIYGEL  G MQK+ N++ E  G + NS FIDVG GLGKPN HVAQ PGVE SYG+E+E VRW L ++N   VL    +D  N +   + +K  H  + A GDI +   FDPFTHVYMFDIGFPP    ++   FN S++ +L+ Y  PK + E Y FD++ + +    + GS E  T Y+YRR            G K+++     DP FA+  +LC+    + S+     + EH+ AT +R+T   VK
Sbjct:  107 KSIDIPTNVSRVYNIVNKHTGSIGGNGHGGAIYGELRVGSMQKMTNLMMEHTGLNVNSRFIDVGCGLGKPNLHVAQHPGVEFSYGIEMENVRWMLGIANLHQVLEQAKRDAVNDEEISEDAKIGHACYLAHGDITEANFFDPFTHVYMFDIGFPPLLFHQLAEMFNSSESEYLICYHGPKLMIETYEFDIELLVQTPTSMHGSSEVHTGYIYRRTAENKRKSKKQTGCKSKKYGVPCDPLFAKAWELCKSDLSEVSEHIAEQIEEHMGATKRRSTRSSVK 386
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: K0R0G2_THAOC (DOT1 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R0G2_THAOC)

HSP 1 Score: 222 bits (566), Expect = 4.530e-60
Identity = 123/293 (41.98%), Postives = 173/293 (59.04%), Query Frame = 3 
Query:  645 FGRTADGPPTKESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVL----------KDEGNSKVKVKVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAA---GLKTERIAEV-DPFFAEGVKLCREGRQDGSDLAEHVEATFQRNTSGGVKTRRSRRA 1481
            FGR        + + +P  V RVY +++  TG++GGNG  GAIYGELT G MQK+ N++ +    D+ S FIDVG GLGKPN HVAQ PGVE SYG+EL   RW L +SN + V+          KD+G+  +      H L+FA GDI +   FDPFTHVYMFDIGFPP    ++   FN+SQ+ +L+ Y  PK + E+Y F+++ + +    + GS E  T Y+YRR   AA     KT+++  + DP FA+  ++C+ G ++  D   H  A  + N   GV +RR  R+
Sbjct:  134 FGRNV------KQIEIPRNVSRVYKIVHSQTGSVGGNGHGGAIYGELTTGSMQKMTNLMMKHTNLDKTSRFIDVGCGLGKPNLHVAQYPGVEFSYGIELYHTRWMLGMSNLQQVMVAAMSDFENGKDKGDEAI-----GHRLYFAHGDITEATHFDPFTHVYMFDIGFPPTLFHQLAEMFNNSQSEYLICYHGPKLMIEDYGFNIELIVQTPTSMHGSSEVHTGYIYRRSETAAEAKSCKTKKLGVLCDPLFAKAYEMCQSGLKNVHD---HTNAIVESNW--GVSSRRRTRS 410
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A7S3Q7R7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q7R7_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.200e-59
Identity = 114/254 (44.88%), Postives = 155/254 (61.02%), Query Frame = 3 
Query:  621 RSASKKGAFGRTADGPPTKESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKD----EGNSKVKVKVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKG----VAAGLKTERIAEVDPFF 1358
            + +  +  FGR      T   V + P+ + VY L+NK TG+IGGNG  GAIYGELT G MQK++N++KE   F+ +S FIDVG GLGKPN HVAQDP VE SYG+E+E VRW L +SN +  LK+    E   + + +  +H    A GDI + + FDPFTHVYMFDIGFPP    ++G  FN SQ+ +L+ Y  P  + + Y F+V+ + +    + GS EG   Y+YRR G    +  GL++      DP F
Sbjct:  132 KRSRSRNYFGRYQQ---TDTDVTILPKTRTVYKLVNKMTGSIGGNGRGGAIYGELTMGSMQKMINLMKEHTNFNSSSRFIDVGCGLGKPNIHVAQDPQVEFSYGIEMEHVRWVLGMSNLKVSLKEACRQEAEGQTEEECIRHRCMLAHGDITEAQFFDPFTHVYMFDIGFPPKLFKQLGKMFNRSQSEYLICYHRPSLMVDRYGFNVELIIQEPTSMHGSSEGHMGYIYRRVGRKQKIGKGLQSVDGVPCDPLF 382
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A7S2YHF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YHF8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.830e-58
Identity = 130/285 (45.61%), Postives = 168/285 (58.95%), Query Frame = 3 
Query:  627 ASKKGAFGRTADGPPTKESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKDEGNSKVKVKVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRR----KGVAAGLKTERIAE-VDPFFAEGVKLCREGRQDGSDLAEHVEATFQRNTSGGVKTR 1466
            A ++  FGR ++       + +   VK+VY LI K TG+IGGN S G IYGELT G MQK+VN++KE   FD +S FIDVGSG+GKPNFHVAQDPGVEISYGLE++  RW LS++  R  L    +   + +  +H   F   DI +  +FDPFTHVYMF IGFPP   I +   +N S++ +L+ Y  PK + + Y F+V+ + K    + GSKEG T Y+YRR       AA   TE   E VDP FA G+   R G    S+L   V  T     S G  TR
Sbjct:  226 AKRRIVFGRYSE-------IDVTERVKKVYRLIRKLTGSIGGNASNGPIYGELTMGSMQKMVNLMKEHTHFDASSKFIDVGSGIGKPNFHVAQDPGVEISYGLEIDADRWLLSMNCLRGTL----DLAAQDEDVQHRCVFVQEDIRQAHSFDPFTHVYMFSIGFPPDLWITLADVWNRSKSPYLICYHSPKDIIDCYEFEVELLAKTPTSMHGSKEGHTGYVYRRTTSASTTAAESSTETTVERVDPLFAGGIATIRGGL---SNLQTWVSTTLNAKMSSGPSTR 496
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A485LHH1_9STRA (Aste57867_21414 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LHH1_9STRA)

HSP 1 Score: 215 bits (548), Expect = 3.110e-58
Identity = 115/260 (44.23%), Postives = 161/260 (61.92%), Query Frame = 3 
Query:  699 EVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKDEGNSKVKVKVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDS-QARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAAG--LKTERIAEVDPFFAEGVKLCREGRQDGSDLAEHVEATFQRNTSGGVKTRR 1469
            +V  VY LI+K TGA+GGNG+ GAIYGE+T   M K+++ + E   F + S F+D+GSGLGKPNFH A  PGV ISYG+ELE+ RWELS+ N R VL     SKV+  +      F  GDI   +T DPF+HVY FD+GFPPA +  I   FNDS ++R+ +S+  PKKV ++Y FDV+ + +L+  + GS EG  +Y YR+    A     ++   E+DP F  G ++ ++G      + E +E    +  S G +TRR
Sbjct:   90 DVTTVYQLIHKQTGALGGNGAGGAIYGEITKNSMGKIIDYMVEHCDFSDQSVFLDIGSGLGKPNFHAAVTPGVAISYGVELEDQRWELSLYNLRAVLTSTVRSKVRPVI------FTQGDINDAETLDPFSHVYSFDVGFPPAVMAHIAECFNDSRESRYFISFHGPKKVIDQYGFDVEEIGRLATSMAGSSEGHAVYFYRKTDTPASSSASSDDEIEIDPMFRAGFQVVQQGHDK---VVEWIEGHVSQRRSLG-RTRR 339
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A7S2PSU5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSU5_9STRA)

HSP 1 Score: 216 bits (551), Expect = 5.580e-58
Identity = 117/254 (46.06%), Postives = 155/254 (61.02%), Query Frame = 3 
Query:  675 KESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLK------------DEGNSKVKVKVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAAGLKTERIAEV----DPFFAEGVKLCREG 1388
            K ++ +P  VKRVY +INK TG+IGGNG  GAIYGELT G MQK+ N++ E     + S FIDVG GLGKPN HVAQ PGVE SYG+E+E VRW L ++N   VLK             +G+   K++   H  FFA GDI +   FDPFTHVYMFDIGFPP    ++   FN+SQ+ +L+ Y  PK + + Y F+V+ + +    + GS EG   Y+YRR   A    +   ++     DP FA+  ++CREG
Sbjct:  141 KSTIKVPTNVKRVYEIINKHTGSIGGNGHGGAIYGELTVGSMQKMTNLMIEYTDLSKESRFIDVGCGLGKPNLHVAQYPGVEFSYGIEMEHVRWMLGMANLDQVLKAAQKDIAFEEAKKDGDDGSKIE---HRCFFAHGDITEASFFDPFTHVYMFDIGFPPRLFHQLAEMFNNSQSEYLICYHGPKLMIDRYEFNVELLVQTPTSMHGSAEGHQGYIYRRTKKANKRNSCSTSQFETPCDPLFAKAWEVCREG 391
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A1Z5J7B9_FISSO (DOT1 domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J7B9_FISSO)

HSP 1 Score: 213 bits (542), Expect = 1.250e-57
Identity = 112/250 (44.80%), Postives = 149/250 (59.60%), Query Frame = 3 
Query:  627 ASKKGAFGRTADGPPTKESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKDEGNSKVKV------KVSKHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAAGLKTERIAEVDPFF 1358
            A KK  FGR  D       + + P V++VY +I K TG+IGGNGS G IYGELT   MQKVVN++K+   F+ NS FIDVGSG+GKPN HV QDPGV++SYG+E+E+ RW L ++  + VL      +  +      ++  H   F  GDI    +F+PFTHVYMF IGFPP+  I +   +N S + +L+ Y  PK + + Y FDV  + +    + GSKEG T+YLYRR         E I   DP F
Sbjct:   79 AKKKLIFGRLVD------EINIQPNVRKVYGIIRKLTGSIGGNGSHGPIYGELTMSSMQKVVNLMKQHMNFNSNSKFIDVGSGIGKPNLHVCQDPGVKLSYGIEIEQARWILGMTCLKGVLDAAVKEEKDIDEAYDDEIILHRCVFECGDIRSANSFNPFTHVYMFSIGFPPSLWIHLAAMWNSSDSPYLICYHGPKDIIDSYEFDVVLIAQAPTSMHGSKEGHTVYLYRRTTHTG----EEITSCDPLF 318
[Close]
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Match: A0A6T8H956_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8H956_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.740e-57
Identity = 114/258 (44.19%), Postives = 153/258 (59.30%), Query Frame = 3 
Query:  675 KESVVLPPEVKRVYSLINKATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGLGKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKDEGNSKVKVKVS---KHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHLVSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAAGLKTE-RIAEV---------DPFFAEGVKLCREGRQDGSDL 1409
            K S+V  P V+  Y ++ + TG IGGNGS GAIYGELT G MQK+VN +KE   F+ +S FIDVG GLGKPN HVAQDPGV+ SYG+E+E VRW + + N   VL+   + + +       +HN   A GDI +  TFDPFTHVYMFDIGFPP     +   FN SQ+  L+ Y  PK + E Y FD++++ ++   + GS EG   YLY+R   +   K   + ++V         DP F +   +  +G  D S L
Sbjct:  178 KSSIVCQPNVRTAYRIMQRRTGFIGGNGSGGAIYGELTMGSMQKMVNAMKEHTDFNADSRFIDVGCGLGKPNIHVAQDPGVQFSYGIEMERVRWFMGMHNLTHVLEKARSQRCEPSCENTLRHNCILAHGDITEASTFDPFTHVYMFDIGFPPKLFKYLSAMFNRSQSPFLICYHGPKLMIERYKFDLEFITQIQTSMHGSSEGHMGYLYKRSAASTRKKKRTKNSQVTVKGINVPCDPLFVDPFNVVGQGLDDLSSL 435
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ9_ECTSI6.260e-15466.59DOT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4QC13_9STRA1.430e-6445.98Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B8BQJ6_THAPS1.670e-6043.57DOT1 domain-containing protein n=1 Tax=Thalassiosi... [more]
K0R0G2_THAOC4.530e-6041.98DOT1 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A7S3Q7R7_9STRA2.200e-5944.88Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2YHF8_9STRA1.830e-5845.61Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A485LHH1_9STRA3.110e-5844.23Aste57867_21414 protein n=1 Tax=Aphanomyces stella... [more]
A0A7S2PSU5_9STRA5.580e-5846.06Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1Z5J7B9_FISSO1.250e-5744.80DOT1 domain-containing protein n=2 Tax=Fistulifera... [more]
A0A6T8H956_9STRA1.740e-5744.19Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:259842..269468 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score483.4
Seed ortholog evalue1.2e-133
Seed eggNOG ortholog2880.D7FSQ9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2AVA3@1,2RZVU@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-03_002870.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons13
Model size3339
Cds size1362
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927400.2300344-UTR-C-linearis_contig106:259841..2599381622927400.2300344-UTR-C-linearis_contig106:259841..259938Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 259842..259938 +
1690879678.5752177-UTR-C-linearis_contig106:259841..2599381690879678.5752177-UTR-C-linearis_contig106:259841..259938Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 259842..259938 +
1622927400.240373-UTR-C-linearis_contig106:260151..2601821622927400.240373-UTR-C-linearis_contig106:260151..260182Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 260152..260182 +
1690879678.5963564-UTR-C-linearis_contig106:260151..2601821690879678.5963564-UTR-C-linearis_contig106:260151..260182Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 260152..260182 +
1622927400.4325116-UTR-C-linearis_contig106:267619..2694681622927400.4325116-UTR-C-linearis_contig106:267619..269468Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 267620..269468 +
1690879678.7609954-UTR-C-linearis_contig106:267619..2694681690879678.7609954-UTR-C-linearis_contig106:267619..269468Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 267620..269468 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927400.2501228-CDS-C-linearis_contig106:260182..2603851622927400.2501228-CDS-C-linearis_contig106:260182..260385Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 260183..260385 +
1690879678.60491-CDS-C-linearis_contig106:260182..2603851690879678.60491-CDS-C-linearis_contig106:260182..260385Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 260183..260385 +
1622927400.2596211-CDS-C-linearis_contig106:262348..2624871622927400.2596211-CDS-C-linearis_contig106:262348..262487Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 262349..262487 +
1690879678.6223764-CDS-C-linearis_contig106:262348..2624871690879678.6223764-CDS-C-linearis_contig106:262348..262487Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 262349..262487 +
1622927400.2679958-CDS-C-linearis_contig106:262553..2626521622927400.2679958-CDS-C-linearis_contig106:262553..262652Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 262554..262652 +
1690879678.6421323-CDS-C-linearis_contig106:262553..2626521690879678.6421323-CDS-C-linearis_contig106:262553..262652Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 262554..262652 +
1622927400.2792015-CDS-C-linearis_contig106:263297..2634841622927400.2792015-CDS-C-linearis_contig106:263297..263484Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 263298..263484 +
1690879678.6538868-CDS-C-linearis_contig106:263297..2634841690879678.6538868-CDS-C-linearis_contig106:263297..263484Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 263298..263484 +
1622927400.2881901-CDS-C-linearis_contig106:264026..2640941622927400.2881901-CDS-C-linearis_contig106:264026..264094Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 264027..264094 +
1690879678.672319-CDS-C-linearis_contig106:264026..2640941690879678.672319-CDS-C-linearis_contig106:264026..264094Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 264027..264094 +
1622927400.297703-CDS-C-linearis_contig106:264580..2647381622927400.297703-CDS-C-linearis_contig106:264580..264738Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 264581..264738 +
1690879678.6860068-CDS-C-linearis_contig106:264580..2647381690879678.6860068-CDS-C-linearis_contig106:264580..264738Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 264581..264738 +
1622927400.3100872-CDS-C-linearis_contig106:265158..2652891622927400.3100872-CDS-C-linearis_contig106:265158..265289Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 265159..265289 +
1690879678.6966999-CDS-C-linearis_contig106:265158..2652891690879678.6966999-CDS-C-linearis_contig106:265158..265289Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 265159..265289 +
1622927400.3219402-CDS-C-linearis_contig106:265680..2657331622927400.3219402-CDS-C-linearis_contig106:265680..265733Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 265681..265733 +
1690879678.7087562-CDS-C-linearis_contig106:265680..2657331690879678.7087562-CDS-C-linearis_contig106:265680..265733Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 265681..265733 +
1622927400.3323922-CDS-C-linearis_contig106:266083..2661801622927400.3323922-CDS-C-linearis_contig106:266083..266180Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 266084..266180 +
1690879678.721155-CDS-C-linearis_contig106:266083..2661801690879678.721155-CDS-C-linearis_contig106:266083..266180Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 266084..266180 +
1622927400.3421292-CDS-C-linearis_contig106:266635..2667151622927400.3421292-CDS-C-linearis_contig106:266635..266715Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 266636..266715 +
1690879678.7305467-CDS-C-linearis_contig106:266635..2667151690879678.7305467-CDS-C-linearis_contig106:266635..266715Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 266636..266715 +
1622927400.351858-CDS-C-linearis_contig106:266995..2671081622927400.351858-CDS-C-linearis_contig106:266995..267108Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 266996..267108 +
1690879678.7410178-CDS-C-linearis_contig106:266995..2671081690879678.7410178-CDS-C-linearis_contig106:266995..267108Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 266996..267108 +
1622927400.360888-CDS-C-linearis_contig106:267585..2676191622927400.360888-CDS-C-linearis_contig106:267585..267619Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 267586..267619 +
1690879678.7521-CDS-C-linearis_contig106:267585..2676191690879678.7521-CDS-C-linearis_contig106:267585..267619Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 267586..267619 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.984.1prot_C-linearis_contig106.984.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig106 260183..267619 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig106.984.1

>prot_C-linearis_contig106.984.1 ID=prot_C-linearis_contig106.984.1|Name=mRNA_C-linearis_contig106.984.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=454bp
MAQEAKTAVDVTAAGGLPGSPAPAAKRGSGSGNPLSPPPRTPESRISSAN
AQSPSGGVVDRRQLFDGDSSSSDPSAMPPPPTTPTSTARRPRSESKTPAK
RGTPKDVTAMRQGGGGDWNGDGEGGGGSVTPRKKKKAADGTVRTLSMTPT
KKRGDAEAEPETPSRSASKKGAFGRTADGPPTKESVVLPPEVKRVYSLIN
KATGAIGGNGSAGAIYGELTAGGMQKVVNVLKEEAGFDENSSFIDVGSGL
GKPNFHVAQDPGVEISYGLELEEVRWELSVSNHRTVLKDEGNSKVKVKVS
KHNLFFAAGDILKCKTFDPFTHVYMFDIGFPPATLIEIGTKFNDSQARHL
VSYQIPKKVTEEYAFDVDYVRKLSLHLTGSKEGKTMYLYRRKGVAAGLKT
ERIAEVDPFFAEGVKLCREGRQDGSDLAEHVEATFQRNTSGGVKTRRSRR
ASP*
back to top

mRNA from alignment at C-linearis_contig106:259842..269468+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig106.984.1 ID=mRNA_C-linearis_contig106.984.1|Name=mRNA_C-linearis_contig106.984.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9627bp|location=Sequence derived from alignment at C-linearis_contig106:259842..269468+ (Chordaria linearis ClinC8C monoicous)
CGAGCCGGCGAGACATCGTACGGAGGTGGCACAACAACGGATCAACCCCG
CTAAGCGCAGAGGGTGGGCGTTCAGGGGAACTCTCCGGCGAGCTTTGGTA
CGTTCACGTGAAACGTACCGTGTGCGCGTGTGTGACAGGGGCCGTTTCCT
CTCGCTCCCGCCAAAAATCGCGGCTCGCAAAATAGTCGAGCCCTCGGCAC
CATACCATACCTGCAGCGTAAAGGAAACGCCACCAGGCCCCGCTGCTGAC
ACCTGTCTCTGATGGCCTCATCCTGTGTATCTTTACTTCTTTATCTGCCC
TCCTTTTCAGCCCAGTGCCAACAAGAGGGAGAGGGGAGAAAATGGCGCAG
GAGGCAAAAACCGCCGTTGATGTCACGGCGGCCGGAGGTCTCCCGGGCAG
CCCAGCGCCGGCAGCCAAGCGAGGGAGTGGCAGCGGCAACCCGCTTTCGC
CGCCGCCGCGCACCCCAGAGAGCAGGATCAGCAGCGCCAATGCCCAGTCT
CCCTCTGGGGGGGTTGTGGATCGGCGCCAGCTCTTCGATGGTGAGTTATG
ATCGGTAGAGGGCACACACGCTAGTGCCGTACGTGCAATCTAGTCTATAT
GGTTTTTGTGTCTCGTACGTTTTTAGATTTTGTGACCGTTCCAGGCCGGA
ATACCCTCGCGCTAGGACGTACCTCGTGGGTATCTCGTCTTCTGTTTCGG
CCGTGTTGCACAGAACGCTAGCTACGGCTGCCGCACCTTTAAACCGGAGG
ATCTCACCCGTATGCTTGCCGGAAAAGAGCCACAGCACCACCAGAGAAAA
ACAGCAGCGGCGTGGACTCCTAGACTACAAAGCAAAGTTACCAGATGTAG
ACCTACAGACGATGTCGTGTGTGCAACACGAATGGCGAATCGCTTTGGGG
GTGCGCCTTTTTGCCTTCCTGCTGTGCTGGGAGGCGTGGTGCGTGGATCG
TTGCCTCGCTAGCCGGCCTAAAAGATTGCGTCTTTGTACACACGAGAGCA
GGCATCTCTGCTCCGCGCTTGGTGCGACCCACGATCCGAGAAATGCTGCC
TTCCTGCACACGGATCACGCTCACAACACACCTCTTTGACGCATGCACGT
ATGCACACCTCTTTTGTCGGATCTAGAACACGCTCGGTGCCTGCGCAACA
ATCGCTCAGAGGGCAGGTTGCGGCCACCCTTTCCCTAGCGCAGCACCAGC
GACCGCAACGCGTACTATCTGTATGTATGTACATACGCTGTAACGTTCTC
CATTCTCGACAGAGGTGTGGCCACGGAATTTTTCGCGCCAAAATCAACGG
CGTACATGTATCCCCCCACCCCACCCTCGACGTGTCTTGCGTGTACAGAA
GTTGACTTCTTCGACTGCACAACGAGCTGAACCTGTTGTTCTTCCGTGTT
ACAGGCCAATTCAAGGCATCACCGATGGTACACAGACAGTCTTTGCATTT
TCCGTTTGGAATGATGTTTCCGAACCACAGACTGGTATGTAGACAAATGT
CAAAAATGTCGCACCGCCTCCCGTCTGACTCTATGTTCAGGCCCCACATG
CTTTACCTTTGTAGGGAGAGCCTCTCTCTTAAACGACGTGCACAGTCTGT
GCAGATTCACGGTGGGAAAACTACACTATGTGCGTATGTTGCTAGACTTG
AAAGGCGTGCTGTCGTTCTTTGGGTACACCAAAAAAAGGGGGCTATGTTT
TACGTATGTAGGTGTTGGTTGTTGTTGTTGTTGTTGTTGGAAGGATCTCC
TTTCCCCGGTGTTGTCTGTCAGCTTTTGTTTCCTGGTTCCCACATGCCCA
GGTTAATAATCCTTAAAACTAGCCCTTCATATTCAACGATCACAGCGAGT
GTACACGGCTAAGCAGCTGTGCGTTCTAATACATAGGTAATTGTTTTATT
TTTATTTTTCGGCCTTCACTTTCGACACGCCAACCTCCCGTCTGCGCATG
CTGGACCTTAAAGACTGACCTCGGCACAGCGCCAGAAGCCCCCCCCCCCC
TCCCGGTGGTGGTGCCCCGTTTTTTCGTGAAAAAGGTTTCAATAATTTTT
GGAAGAAGCAAAAATACCAAGACACTCGTACACTTTGAACCGTTTTTTTT
TAACGTATATTTACTATAGGTATTTAAACATGCCTCTGCTTCATCGAGCC
TCATCGCACTGCCAGCCCCCCCCCCGCCCGGCCGTCCGGCTACGCCCACA
CTTCGTATGGAAACATGTAAATATTGCCGCGAAAATACCGCAAGCGCCCC
AGTCACTCTGGTCAGCCGAATACGTCACCCCCAACGCGTTCTCGGACGTA
CATACAGCAGTCAAATGCAGGAGCAACGCCGGAGAGCATGCACAGACACC
TTTTTAAAGAAACCGGTGATTTTCGCCCAAGTGACATCACGTTCGTCCAT
CCGCTACGCAACTCGATTTGGATGGATCTTGGTGCTTATTCCATGGCATG
CATGCATGCACGACACGATGACCCAGGGCAAGGCGGCGGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCGACCCCAGCGCCATGCCACCGCCGCCGACA
ACACCTACGTCCACCGCCCGGCGCCCGAGGTCCGAATCCAAGACCCCAGC
CAAGCGCGGGACGCCCAAGGACGTCACGGCCATGCGCCAAGGGGGAGTGG
GGGCAGGGGGCGGCGGGAGCGGCGGCGGCGGCGGCGGCGGCGGCGGGAAG
GACGACGGGGAGGGAGGGGACTGGAACGGGGACGGGGAAGGTGGGGGGGG
CAGCGTGACGCCGCGCAAGAAGAAGAAGGCGGCGGACGGGACTGTGCGGA
CTCTGTCGATGGTGAGTCTTTTCTTTCGATGGCGGTGTGATGGCGGTGTG
TTTGATGTGCGAGGTATAATATAAATCATAAATAGTACCTTTGCCTGGCG
TGGGCACAGCAGGAGGTCCGTGCGGGCCAAGTTGACGGGTGCGCGATCTG
AAAGGAGATGAGGGGGGGGAGAAGGACCGAGAAAGACAGACAGGGCCTTT
CGTAGTCGAGGTGGAGGGAGAGGATAGAGGATCTTATCAGTGCAGAAATA
CTTGGTCTGCAGTGGTGGTCATGGGTGGCGACAAGGCGGATCAACTTAGG
ACCGTCTGGGGTCGATTGCGACCTGCGAGCTGTTGCTGAACCAAGGCGCG
CCCTTTCCGGGGGGTTGCATGTCGTCGCTCTTCTCTCTTTTTAATTAGTT
GTCTGCCCGTTCATGAAGGATATGGTGCGGTCGATTCCCATGTTCACCGG
GGGGGGCTAACTTTCCTGACAAAACTCCACCAAGCGGGTCGACGAAAAGC
GATGACACTAGGTGTTCCTGGACGACAAGGGTCCTCCATATGTGTAGTCT
AAAGCCCGCCCGCTCCCCTCGACAGCAGCAGTCAGTGGGTGCCGTGTTTG
CAGATAGCCTGTGATACGGCAGTTAACGCTCGGCTTGGCTTCCACCTTGG
CGACAGACGCCAACGAAGAAGAGGGGGGATGCTGAAGCTGAGCCAGAGAC
GCCGTCACGGTCGGCGAGCAAGAAGGGAGCGTTCGGCCGAACAGCCGACG
GACCCCCCACGAAGGAGAGCGTGGTCTTGCCCCCCGAGGTGAAGCGGGTG
TACTCGCTGATCAACAAGGCTACCGGGGCCATCGGGGGGAATGGTGAGTC
GAGAGACGCAACACGCATGCCGTAATGTGTGCTCCGCGAAGAACGGGTGA
ACCGCTCCGCATGGTGTGATTTCCCCCCTCTTTTTTTTTGTCGTTGCTGG
CGCTTGTCTCTCACTGCCAGTGCCGATAAATTCTCGGTGATTCCTTTCCG
AGGTTCCTCTTCGAACGCCTGCCTCCACCAAAACGCACGCCGCTCTTTTT
TTTAACCACCTTAAACGTTTCTGGCAACCACGCGCAGGGGGGTTGATTCA
CGGGAGTTTTTTGTTTTTGTCGTTGTTGCTGGCGCTATTTGTCTCGCCAT
CGACCGGTTTTGTTCCACCTCCTTACCCTACCAGTTCCCGCAGTATTCCG
GCGTTTCGTGTTTTCTCTGAAACGGTCACGCGACGAAATTGCTGCTGCTT
TGTTTTTGTTTTTGGTTTTGTTTTTGTTTTTTTTGCTGCGGTGTGTTTTC
GTTCGTAAGTTTTTCACTTTCGAGATAATTCGGCCACTCGTCTTGTGTTT
TTGGTGCTGCTGCCTGCGACGCTCGATTTCTGTAGGGAGCGCCGGGGCCA
TCTACGGAGAGCTGACAGCGGGCGGCATGCAGAAAGTCGTGAACGTGCTC
AAGGTATGTAGTTCGTTGTTCGTGGTGCGCGTTTCGCCGTTGAGCTCACT
CACTCACCATCCGAAAGTTAGTTCGTCGGTGGGTTGTTCTGTTCGTCTCG
ACTGAAGCAGCGTCATTCCCACGCATACCTGCTGCGCAGGCAGGCAGGTA
GGCTGAGGAAGCTTGAGCGGTTTTTTGTACACGTGTCCTGCGTGCTCCAG
GACTCCCCTCAAGTGCGTTACCGCTCAGCGCTGGGCTTGTGAACCATCAG
CGCAAGAACGCCCAAGATTGCGATAGCGCGGTGCCCCCGTCAGCGAAGAA
CTTGCTGGTTTAATTGCCCATGTCCCCGACCCCCGCGCGGTACGGCGACA
AAGCTTAAACTTTGTCCATACCCGACTCCTGCACTCGGAAGAGCGCCCCG
CCCCAACACACACCACCTCACTTTTTTTCGTTGCCCGTGTGTATGCGTCT
GTTTGTTTTTGTGTGCTCGTGGTTGTGTCGTGCTGGCAGGAAGAGGCAGG
CTTCGACGAGAACTCTAGCTTCATCGACGTGGGGTCGGGCCTCGGCAAGC
CCAACTTCCACGTCGCGCAGGACCCCGGCGTCGAGATTTCCTACGGACTG
GAGCTGGAGGAGGTCCGCTGGGAGCTCAGCGTCTCCAACCATCGAACGTG
TGTGTTCGACGCCGAACCCCACACGTAGTAGCTCTCACTCTCTACGAAGC
GCACGCAAGACCCACTCACGCGAGCCGTTTGGTTTTGCGATGCTTTGTCC
GTGGCTTGTGCTTGCCTTTTGAAGACGAGAGGTGGCACGAAGTAGTCGTG
GTAACCATCACACATATCAACGACAATAACAGTGTGAACCGCATGAAGGT
TCGACAGCCCGCATGGTGGCATGAAGCGTGGCCGTCTGCTGTTCTCGCAT
TTCCTCTAGAAGGGGAAGGTCCACAACATAAGGCAAAAAGTAGGTGCGCA
TATCATGTCACATGGGTTTCCTTTACTGTCGGCTGTGTTTGTTACATCTA
AAGTATGTATCCGTTTTTCACTTTGTCTCACTGTTGCTGCTGCGGTTGCT
GTTGATGGCGTATTCAGAGTGTTGAAGGACGAGGGCAACAGCAAGGTGAA
GGTGAAGGTGTCGAAGCACAATCTCTTCTTCGCGGCGGGCGACATCCTCA
AGTGCAAGACTTTCGACCCCTTCACCCACGTCTACATGTTCGACATAGGT
ATGTACCACCGCCGTGCCAAAGTATGCACCTCAGCTATTTAGCCCACTCT
CGCGCTTGTGTGCGCGCGAGTGTTTTCGCTCTCCCGCGATACCCATACAC
CACAGACTGTTTCAACGCACCCAGTATGAGCGCGAGTTTCAGCTAGAGCG
GGGGGGGGCTCTGATGCGCGCGCAGCCCGTGTGCGATGGAATGACAGGTA
TACTCATGGACCCCGAAACAATACGTGTCGTCTTGTCCGCTAGACCGGCA
CACGACAAGGCTTTATCTCCCCTTCTTTTCCCTCCCTGGTTGCGGGCTTC
TTGCTTCCAACCCCGCGACAAGTTGTGCTCTTCTGACACATGCGTGCACG
TGGTGGGGCTGTCTTCGTCGCGTGTCGGTGTGTCAACAGGTTTCCCGCCG
GCAACACTTATAGAGATCGGAACAAAGTTCAACGACTCACAGGTGTGTGT
GTGTGTGTGTGTGTGTATGTATGTGTGTGTGTGTATGTGTGTGTGTGTGT
GTGTGTGTATGTATGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGT
GTGTGATGGAATGCGGTTTGTGGTTCATTGTAGACAGTTAATTTTAGAGG
ACTTTCCTCTGACCCTGCTTACCCGGATACGTGTTTGGTTCATGAGATCT
ACGTAGAGGGCGTTCGTTCGTCTTTTTATTTCGTGCCTAGACTACACTAC
CGCACCAGTCAGTCTCAGCGGAACGGCAAAAGAGCTAAACACCTCCTCCT
CCTCCTCCTCCTCTTCTTGCGTTTGTTTCCAACCTCGAAAAGGCGAGGCA
TCTGGTGAGCTACCAGATCCCCAAGAAGGTGACGGAGGAGTACGCCTTCG
ACGTCGACTACGTGCGCAAGCTGTCGCTCCACCTCACGGGCGAGTTTTCA
ATGAAGACATTTTGGACCCTCCCTCCCTTCCATCGGTGTTTAGCTACTCG
AAGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTCTGA
CACAGTGTCATTTGGTGTTTATTTAGTTCAATGGATGAACGGGTGGGTCG
CTTCGACACACGCTTCGGTTCACGGCATTTGTTTCAGCTTCTGCTTGCTT
ACAAAGCGGGCTTCCTCCGGCGCCCGCCCGCCCTGCTTTGGTGGCCCTTG
AAAGTAATTCAGCGTGAAGCAGAGTGTACTATTTAATACCACACGGTAAC
GGATTGGTGGCATCAAAGTGCCTACACCACCGTCAGCGCCGCAATGCGCC
TAGTAAAAGGCTTTCGTTTTGACGTCGTGTCTCGTGTGCGGTCGGGTGGC
TTGTCTGTCTTGTCTGTCTGTCGTGTTGGTTTTTCTGATCGCAGGTTCCA
AGGAGGGTAAGACGATGTACCTCTACCGCCGAAAGGGCGTAGCGGCCGGC
CTCAAGACCGAGCGCATCGCCGAGGTAGGCTGGTGTTCGTGTTCGTGTTC
GTGTTCGTGTGTGTGGCATATCTACTACGGTACTATGGTTCGTGAATTGG
TTGTCCCGCGTTCCGTGTACAGGGGCCGTGGGCGTGTCCCCGCTTTTGCG
CGTTTGTGTTGAAGTGCTGCTATTATAGTCAATGGTGAGACGGACGGCCA
GAGCAACCCAATTTAATGACAACCTCCCGAACGCCGGATCTCTGAGCCCC
CCCCCCTCTCCTCCCTCCGCCCTTGATCTTTTTGTCTGCTTGTTGCTGTT
TCAGGTGGACCCGTTCTTCGCCGAGGGGGTTAAGCTGTGCAGGGAGGGCA
GGCAGGACGGCTCCGACCTCGCCGAGCACGTGGAGGCCACCTTCCAGAGG
AACACATCGGGAGGAGTGTGAGTAGGTGGATGGTACTACAATCCTTGCAG
TTCTCTCTTGAGGAGAAGTACCGCCGTGCTTTCGTCGAAGAACGGCTGGG
CTCCGCGGCTTTCTGGCTGGCGCCATTGACAGGGCTTTCAACGAGTTTGG
GCGACCGTTCGGGGTGAATAAATAGGGTTGAGCGCCCACGGTGCGGTTTG
GTATGGTCGATCCGGGAGTGGCAAGTGGCCAGCAGCGAACGAAGCATTGA
GTACGTCCAGCCATACCAATGGTTTGATGTACCAGGTGCCCTCCTCGTTG
TTTGCTCACACCCACTTCGATCTCCGCCTCGTTTCTCCCTTTCGGATCGG
CTCTGACTCTTCTCTGCTCCCTCCCTTCCCCCTCCCCTTCCTCCATCCAT
CGTTCACGTCCTTTTTCTGGGCTTATTCTGGGCTTGTTTGTCGTCGTCGT
CGTTGCGTTTGCTGCGTCTTGGTGTGTCCTTCTACCCTCGGCAGTAAGAC
GCGGAGGTCACGGCGGGCGAGCCCATGATCGGACCGGACCGTCTTCGTTC
GTTCGTGTTTTCGTCTTCTCGCAAGACAAGAGGAAGAACATGGTAGACAC
GGCCTTGGCCTTTGCTTTGCGGTTTCGGTGGGGGGAAGACGGCTACGATT
CGTTCATTCTACATGCACGCTTCAGCCCTGGGGCTGGGGTGGCGTTGTCA
CGCACCCCCTACACGCAAGATAAGACAATTCTCCGCCCCCCCCCCACGGC
GAGAAACAGTGCTACATCCCCCAGCAGTAGTTCCTCGTTGAGGAAAGGGG
GGCGGAATTCCGGGTCTCGAGGTCTCTTGCAGCAGTGGTTAGAGGTTGTG
TGACATTGAAGATGTTTCCGCGCCCGCCCTCGTTGCACCGTTTTTTTGTT
TGATGTCTCCGGCTGCGAACGACATCGCAGCCGAGCGGAAAACACAACAC
CGGTCGTGCTTGTGCAGTCAAGGAGGCCCTGCCCTGGGTACATAGCTTCC
GCGCGCATGGTTTTTGAAAGAACCAGCTGCGAGGGTTTGGCGCTAAAATA
GTTGGTATTGTCGTTTTAGAATATTGGGTTCCATCTATGATACCAGTATT
TGTTGTTTATGGTGTGCGCATGCATGACGAAGTATTTATGTCGTTTTTTC
TGGTGGGGGGGCAAGCTTTGAAGGGGACCTGTACTGTAGAGCGGCACGGC
AGGTGGGAGTAAAAGACCCACCGCCGCGGTATTTATCAGCCAGCTTTTAA
CACGCCTCTCGCGGAAACGGCGCCATCTAGCTGTTAAGGGGGTGGGATCT
ACGGCCGGCGGTTGCTTCTGCGCAATACGATTTAGTGGTGGTGTGATTCT
TGTAGTTGTTTGGCATACTGCAATGCAAGTACGCCAGTCTCGTATTATTC
AAGCTTTTGTTTCTCGGACTACGTGGCGGCATTTTTTTTTCACGGCGGCC
GTGTTTATTTGCTTCGAAGTATGCTATTGGCCGCCGCAGTCTTCTCCCTT
GCCGGTACTGTTTATTTAACCTTGTGTGTTGTTGCGTGTATGCGCGTCTA
CTCTTGCTATTCAAGAGAGGACGCGGTTCGGTATTTGAGCGCGCGTCCTA
CAAGCGTGTAGCCTACGCGTAGTTTTTCGTGTTTGGAGCACGGGATTTTG
TCGAGTTCGGGTGAAACATGTTTTTTTTTTTGTGTGTGTTGGGTGGGAGC
TCGAAGATAAGTGGAGCGAGCAAAAAAGCGGGGGAAGTGTACTATAGCTA
GTCTCGTGACATCATGCTTCCTCCCACCTATTTGGAATATTGGAATGGTA
CATCTACCGCCGTAGAACAGCGGTGCTTATTTGATGAGAAGTGTCTTGGT
GTGATCCGGCATGATCCCATATATATTTCGCGGGAGGGGAGCGCACAACA
AGCAGCAGGGTTTTAGCGCACCGCGGGTTTCAAGGTAGCTCTACCCGCGA
TTGCCTGCGCATTGAGGACATGGAGAGAGAAAGAAGGATGCAGATAGATG
GGCCTACGACATAAACAAGCGATTTCGGACGAACCGCCGGTACGGTGAGC
TTGATGATGGTGCGAGCGTACGCACGGGTGCGGTGGTGGCGACAGCGAGC
TTGCGTGCTTGGGTCTAGGCGACAGAGTAGAAGAAAGGGTCGAGCGACAG
AAAGAAGCACGTGGGGATGAGAGCACCTAGATTGTCTGTCTACGATGTCT
GCCGAGAGGTCCGCAAGCAAGCCACCCATCGCTCAGTCAAGAATTTTGAT
GTTGGCGTGGTGGCGGGGACGGCCAAACGGAAAGAGAAAGACGTAAAGCA
ACAAAAATCATTAACTAGTGGGCGCGACGATAGCGGATATTTAGCACAGC
AGATGTTGAAATAATAAATAATGGCCA
back to top

Coding sequence (CDS) from alignment at C-linearis_contig106:259842..269468+

>mRNA_C-linearis_contig106.984.1 ID=mRNA_C-linearis_contig106.984.1|Name=mRNA_C-linearis_contig106.984.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2724bp|location=Sequence derived from alignment at C-linearis_contig106:259842..269468+ (Chordaria linearis ClinC8C monoicous)
ATGGCGCAGGAGGCAAAAACCGCCGTTGATGTCACGGCGGCCGGAGGTCT
CCCGGGCAGCCCAGCGCCGGCAGCCAAGCGAGGGAGTGGCAGCGGCAACC
CGCTTTCGCCGCCGCCGCGCACCCCAGAGAGCAGGATCAGCAGCGCCAAT
GCCCAGTCTCCCTCTGGGGGGGTTGTGGATCGGCGCCAGCTCTTCGATGG
TGAATGGCGCAGGAGGCAAAAACCGCCGTTGATGTCACGGCGGCCGGAGG
TCTCCCGGGCAGCCCAGCGCCGGCAGCCAAGCGAGGGAGTGGCAGCGGCA
ACCCGCTTTCGCCGCCGCCGCGCACCCCAGAGAGCAGGATCAGCAGCGCC
AATGCCCAGTCTCCCTCTGGGGGGGTTGTGGATCGGCGCCAGCTCTTCGA
TGGTGACAGCAGCAGCAGCGACCCCAGCGCCATGCCACCGCCGCCGACAA
CACCTACGTCCACCGCCCGGCGCCCGAGGTCCGAATCCAAGACCCCAGCC
AAGCGCGGGACGCCCAAGGACGTCACGGCCATGCGCCAAGGGGGACAGCA
GCAGCAGCGACCCCAGCGCCATGCCACCGCCGCCGACAACACCTACGTCC
ACCGCCCGGCGCCCGAGGTCCGAATCCAAGACCCCAGCCAAGCGCGGGAC
GCCCAAGGACGTCACGGCCATGCGCCAAGGGGGAGGAGGGGACTGGAACG
GGGACGGGGAAGGTGGGGGGGGCAGCGTGACGCCGCGCAAGAAGAAGAAG
GCGGCGGACGGGACTGTGCGGACTCTGTCGATGGGAGGGGACTGGAACGG
GGACGGGGAAGGTGGGGGGGGCAGCGTGACGCCGCGCAAGAAGAAGAAGG
CGGCGGACGGGACTGTGCGGACTCTGTCGATGACGCCAACGAAGAAGAGG
GGGGATGCTGAAGCTGAGCCAGAGACGCCGTCACGGTCGGCGAGCAAGAA
GGGAGCGTTCGGCCGAACAGCCGACGGACCCCCCACGAAGGAGAGCGTGG
TCTTGCCCCCCGAGGTGAAGCGGGTGTACTCGCTGATCAACAAGGCTACC
GGGGCCATCGGGGGGAATGACGCCAACGAAGAAGAGGGGGGATGCTGAAG
CTGAGCCAGAGACGCCGTCACGGTCGGCGAGCAAGAAGGGAGCGTTCGGC
CGAACAGCCGACGGACCCCCCACGAAGGAGAGCGTGGTCTTGCCCCCCGA
GGTGAAGCGGGTGTACTCGCTGATCAACAAGGCTACCGGGGCCATCGGGG
GGAATGGGAGCGCCGGGGCCATCTACGGAGAGCTGACAGCGGGCGGCATG
CAGAAAGTCGTGAACGTGCTCAAGGGAGCGCCGGGGCCATCTACGGAGAG
CTGACAGCGGGCGGCATGCAGAAAGTCGTGAACGTGCTCAAGGAAGAGGC
AGGCTTCGACGAGAACTCTAGCTTCATCGACGTGGGGTCGGGCCTCGGCA
AGCCCAACTTCCACGTCGCGCAGGACCCCGGCGTCGAGATTTCCTACGGA
CTGGAGCTGGAGGAGGTCCGCTGGGAGCTCAGCGTCTCCAACCATCGAAC
GAAGAGGCAGGCTTCGACGAGAACTCTAGCTTCATCGACGTGGGGTCGGG
CCTCGGCAAGCCCAACTTCCACGTCGCGCAGGACCCCGGCGTCGAGATTT
CCTACGGACTGGAGCTGGAGGAGGTCCGCTGGGAGCTCAGCGTCTCCAAC
CATCGAACAGTGTTGAAGGACGAGGGCAACAGCAAGGTGAAGGTGAAGGT
GTCGAAGCACAATCTCTTCTTCGCGGCGGGCGACATCCTCAAGTGCAAGA
CTTTCGACCCCTTCACCCACGTCTACATGTTCGACATAGAGTGTTGAAGG
ACGAGGGCAACAGCAAGGTGAAGGTGAAGGTGTCGAAGCACAATCTCTTC
TTCGCGGCGGGCGACATCCTCAAGTGCAAGACTTTCGACCCCTTCACCCA
CGTCTACATGTTCGACATAGGTTTCCCGCCGGCAACACTTATAGAGATCG
GAACAAAGTTCAACGACTCACAGGTTTCCCGCCGGCAACACTTATAGAGA
TCGGAACAAAGTTCAACGACTCACAGGCGAGGCATCTGGTGAGCTACCAG
ATCCCCAAGAAGGTGACGGAGGAGTACGCCTTCGACGTCGACTACGTGCG
CAAGCTGTCGCTCCACCTCACGGGCGAGGCATCTGGTGAGCTACCAGATC
CCCAAGAAGGTGACGGAGGAGTACGCCTTCGACGTCGACTACGTGCGCAA
GCTGTCGCTCCACCTCACGGGTTCCAAGGAGGGTAAGACGATGTACCTCT
ACCGCCGAAAGGGCGTAGCGGCCGGCCTCAAGACCGAGCGCATCGCCGAG
GTTCCAAGGAGGGTAAGACGATGTACCTCTACCGCCGAAAGGGCGTAGCG
GCCGGCCTCAAGACCGAGCGCATCGCCGAGGTGGACCCGTTCTTCGCCGA
GGGGGTTAAGCTGTGCAGGGAGGGCAGGCAGGACGGCTCCGACCTCGCCG
AGCACGTGGAGGCCACCTTCCAGAGGAACACATCGGGAGGAGTGTGGACC
CGTTCTTCGCCGAGGGGGTTAAGCTGTGCAGGGAGGGCAGGCAGGACGGC
TCCGACCTCGCCGAGCACGTGGAGGCCACCTTCCAGAGGAACACATCGGG
AGGAGTTAAGACGCGGAGGTCACGGCGGGCGAGCCCATGATAAGACGCGG
AGGTCACGGCGGGCGAGCCCATGA
back to top