mRNA_C-linearis_contig106.977.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: D8LCJ2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCJ2_ECTSI) HSP 1 Score: 632 bits (1630), Expect = 1.190e-217 Identity = 330/385 (85.71%), Postives = 340/385 (88.31%), Query Frame = 2
Query: 689 PKERRRLGKTHGRARKDGD--SSNPVGARGAGARQREGAADGAGPVLTPGGPGQGRPRKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDPCKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNG 1837
PKERRRLGKTHGRARK+G+ S N A AG R+ +G AD L PGGPGQG+PRKHTLSIAIPGSVVDNAQ+RELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASV D+NNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADD CPFREGVVLDR KKGAGSFVDIGKRKEARIDRPL+PGVRVTVKLDKGDPCKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERG VTVDS +FALP+YRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLR H L NG
Sbjct: 181 PKERRRLGKTHGRARKEGNPGSRNGGAAAAAGRREGQGTADPHPLALAPGGPGQGKPRKHTLSIAIPGSVVDNAQSRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVAXXXXXXXXXXXXXXXXXXXDKNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDACPFREGVVLDRTIKKGAGSFVDIGKRKEARIDRPLDPGVRVTVKLDKGDPCKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGNVTVDSPDFALPEYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRSHVLGNG 565
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A3M6V7G9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7G9_9STRA) HSP 1 Score: 360 bits (924), Expect = 5.370e-114 Identity = 178/329 (54.10%), Postives = 231/329 (70.21%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDP-CKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNG 1837
R +TLS+AIPGS++DNAQ +ELKTYL G++ARAA +F+VDE++V+DD G G V+ + ++ +VFMAR+LQY ETPQYLR+ LFPMHS L AGLLNPLD PHH+RA + +REGVV DR K+ GS V +G ++E +D+ + PGVRVTVK+D+ KK G+ V + PRE+LGLYWGY TR AS ++D+ CP+ GYDL +GTSERG V++D ++F++PK+RHAL+VFGGV GIE VDADE L + G +S LFDMWVNTCP QGSRTIR+EEA+LI+LA LRPH +R G
Sbjct: 105 RAYTLSLAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEVIVFDDQLGDNVGTGAVKKRA-------------------------HDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRITPGVRVTVKIDEASKEFKKKMVGQLVSSAEPREQLGLYWGYTTRFASSLSDVWTTCPFPEGYDLKIGTSERGNVSIDDADFSMPKFRHALIVFGGVAGIEECVDADEKLPVSGDDSHTLFDMWVNTCPEQGSRTIRSEEALLISLAALRPHVIRGG 408
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A6A4D6T1_9STRA (Putative methyltransferase n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D6T1_9STRA) HSP 1 Score: 357 bits (915), Expect = 1.130e-112 Identity = 178/329 (54.10%), Postives = 233/329 (70.82%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDP-CKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNG 1837
R +TLS+AIPGS++DNAQ +EL+TYL G++ARAA +F+VDEIVV+DD + G G + + ++ +VFMAR+LQY ETPQYLR+ LFPMHS L AGLLNPLD PHH+RA + +REGVV DR K+ GS V +G ++E +D+ + PG+RVTVK+D+ KK G+ V + PRE+LG+YWGY TR A+ ++++ + CP+ GGYDL VGTSERG V+VD +F+LPK+RHALVVFGGV GIE VDADE + + G +S+ LFDMWVNTCP QGSRTIR+EEA+LI+LA LRPH R+G
Sbjct: 104 RAYTLSMAIPGSILDNAQTKELRTYLAGQVARAAVIFQVDEIVVFDDQLGTSAGTGAPKKRA-------------------------HDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRITPGIRVTVKIDEASKDFKKKMVGKLVSSAEPREQLGVYWGYTTRFATSLSNVWSDCPFPGGYDLKVGTSERGNVSVDDPDFSLPKFRHALVVFGGVAGIEECVDADEKVPVSGEDSNTLFDMWVNTCPEQGSRTIRSEEALLISLAALRPHVSRSG 407
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A329SJL9_9STRA (Methyltransferase n=16 Tax=Phytophthora TaxID=4783 RepID=A0A329SJL9_9STRA) HSP 1 Score: 354 bits (908), Expect = 1.170e-111 Identity = 180/330 (54.55%), Postives = 234/330 (70.91%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDR-NNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDP-CKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNG 1837
R +TLS+AIPGS++DNAQ +ELKTYL G++ARAA +F+VDEIVV+DD +G N +T G+ R ++ +VFMAR+LQY ETPQYLR+ LFPMHS L AGLLNPLD PHH+RA + +REGVV DR K GS V +G ++E +D+ ++PG+RVTVK+D+ KK G+ V + PRE+LG+YWGY TR A ++++ CP+ GGYDL VGTSERG V+VD ++F+LPK+RHAL+VFGGV GIE VDADE + + G +S+ LFDMW NTCP QGSRTIR+EEA+LI+LA LRPH R+G
Sbjct: 102 RAYTLSMAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEIVVFDDQ-------------------LGNNVST-------GAPKKRAHDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKDKEGSHVYVGLQREVVVDKRIQPGIRVTVKIDEASKDFKKKMVGKLVSSAEPREQLGVYWGYTTRFAPSLSNVWTDCPFPGGYDLKVGTSERGNVSVDDADFSLPKFRHALIVFGGVAGIEECVDADEKVPVSGEDSNTLFDMWANTCPEQGSRTIRSEEALLISLAALRPHVKRSG 405
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: M4BVW2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVW2_HYAAE) HSP 1 Score: 353 bits (907), Expect = 1.930e-111 Identity = 177/329 (53.80%), Postives = 230/329 (69.91%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDP-CKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNG 1837
R TLS+AIPGS++DNAQ +ELKTY+ G++ARAA +F+VDEIVV+DD ++ GV + ++ +VFMAR+LQY ETPQYLR+ LFPMHS L AGLLNPLD PHH+RA + +REGVV DR K+ GS V +G ++E +D+ ++PG+RVTVK+++ KK G+ V + PRE+LG+YWGY TR AS ++++ CP+ GGYDL VGTSERG V+VD ++FALPK+RHAL+VFGGV GIE VD DE + L G++SS LFDMWVNTCP QGSRTIR EEA+L++LA RPH R G
Sbjct: 107 RAFTLSLAIPGSILDNAQTKELKTYVAGQVARAAVIFQVDEIVVFDDQLGTKGRTTGVPVPRS------------------------HDCHVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAQEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRVKPGIRVTVKINEASKEFKKKMTGKLVSSAEPREQLGMYWGYTTRFASSLSNVWTDCPFPGGYDLKVGTSERGNVSVDDADFALPKFRHALIVFGGVAGIEECVDVDEKIPLTGADSSTLFDMWVNTCPDQGSRTIRLEEALLVSLAAFRPHIARGG 411
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: W4GGM5_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGM5_9STRA) HSP 1 Score: 352 bits (902), Expect = 7.720e-111 Identity = 177/327 (54.13%), Postives = 231/327 (70.64%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDPCKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRN 1834
R +T+SIAIPGS++DNAQ +ELKTYL G+IARA A+F+VDE+VV+DD + G+ D+ +N + N+ NVF+ R+LQY ETPQYLRK LFP+H+ L+ AGLLNPLD PHHMR D +REGVV+D+ K+ GS V++G +K A ID+ L+PGVRVTV+LD+ KK G V P+ PRE+ GLYWGY R A+ ++ + CPYK GYDL VGTSERGTV+VD S F LP ++H L+VFGGV GIE +ADE++ + G ++ LFDMWVNTCP QGSRTIR+EEA+LI+++ LRPH +RN
Sbjct: 96 RFYTVSIAIPGSIIDNAQTKELKTYLAGQIARACAIFQVDEVVVFDD----QLGKNANNQDATKK----YN--------------NPNDCNVFLGRILQYLETPQYLRKALFPVHNDLKYAGLLNPLDCPHHMRGDVWSDYREGVVVDQPLKEKQGSHVNVGLQKFAVIDKHLQPGVRVTVQLDESSKDKKKLAGIVVSPAEPREQKGLYWGYTMRFATSISKVWQECPYKNGYDLKVGTSERGTVSVDDSTFQLPSFQHVLIVFGGVSGIEECTNADETIGVSGDQAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLVRN 400
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A0P1ASZ4_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ASZ4_PLAHL) HSP 1 Score: 350 bits (898), Expect = 3.460e-110 Identity = 176/329 (53.50%), Postives = 226/329 (68.69%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDP-CKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNG 1837
R +TLS+AIPGS++DNAQ +ELKTYL G++ARAA +F+VDEI+V+DD + G + + +VFMAR+LQY ETPQYLR+ LFPMHS L AGLLNPLD PHH+RA + +REGVV DR K+ GS V +G ++E +D+ ++PG+RVTVK+D+ KK G V + PRE+LG+YWGY TR AS ++++ CP+ GGYDL VGTSERG V+VD +F LP +RHALVVFGGV GIE VDADE+L + G +S+ LFDMWVNTCP QGSRTIR+EEA+LI+LA LR H +G
Sbjct: 102 RAYTLSMAIPGSILDNAQTKELKTYLAGQVARAAVIFQVDEIIVFDDQLGNSVSTGAPKKRAQDC-------------------------HVFMARILQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRAHEWSVYREGVVTDRPLKEKEGSHVYVGLQREVVVDKRIQPGIRVTVKIDEASKEFKKKMVGTLVSSAEPREQLGIYWGYTTRFASSLSNVWTNCPFPGGYDLKVGTSERGNVSVDDPDFTLPTFRHALVVFGGVAGIEECVDADETLPVSGEDSNTLFDMWVNTCPDQGSRTIRSEEALLISLAALRSHVKHSG 405
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A5D6XR65_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR65_9STRA) HSP 1 Score: 349 bits (896), Expect = 4.200e-110 Identity = 180/337 (53.41%), Postives = 235/337 (69.73%), Query Frame = 2
Query: 848 RPRKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDD-LSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPNVFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDPCKKNHK----GRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRNGAD 1843
R R TLS+AIPGS++DNAQ +ELKTYL G++ARAA +F+VDEIVV+DD L SR GG AS + +VF++R+LQY ETPQYLR+ LFPMHS L AGLLNPLD PHH+R+ + +REGVV DR K GS V +G ++E +D+ ++PG+RVTVK+D+ K+HK G+ V + PRE+LG+YWGY +R AS + ++ P++GGYDL +GTSERGTV+VD + FALP +RHALVVFGGV GIE V+ADE++ + G +S +LFD+WVNTCP QGSRTIR+EEAVL++LA LR H R+GA
Sbjct: 81 RGRAWTLSMAIPGSIIDNAQTKELKTYLAGQVARAAVIFQVDEIVVFDDQLGASRLDGGGAVAKRAS------------------------DCHVFLSRVLQYLETPQYLRRALFPMHSDLSCAGLLNPLDCPHHLRSHEWSVYREGVVTDRPLKDKEGSHVHVGLQREVVVDKRIQPGIRVTVKIDEAT---KDHKKKMMGKLVSSAEPREQLGVYWGYTSRFASSLNNVWQDAPFQGGYDLKIGTSERGTVSVDDAGFALPPFRHALVVFGGVAGIEECVNADETIPVSGEDSHSLFDLWVNTCPSQGSRTIRSEEAVLVSLAALRSHLARSGAS 390
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A1W0A096_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A096_9STRA) HSP 1 Score: 348 bits (892), Expect = 1.500e-109 Identity = 176/330 (53.33%), Postives = 223/330 (67.58%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPN---VFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDPCKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRN 1834
R T+SIA+PGS+VDNAQ +ELKTYL G+IARAAA+F+VDE++V+DD G N T NNPN VF+ R+LQY ETPQYLRK LFP+HS L+ AGLLNPLD PHHMR D+ +REGVV+++ TK GS+V++G +K A ID+ ++PGVRVTVKLD+ KK G V P+ PRE+LG YWGY R A+ + ++ PYK GYDL +GTSERGT VD +F LP + H L+VFGGV GIE ADES+ + G ++ LFDMWVNTCP QGSRTIR+EEA+LI+++ LRPH + N
Sbjct: 82 RLFTVSIAVPGSIVDNAQTKELKTYLAGQIARAAAIFQVDEVIVFDDQL-----------------GKAANDKDVT--------KKYNNPNDCHVFLGRILQYLETPQYLRKALFPVHSDLKYAGLLNPLDCPHHMRGDEWTTYREGVVVEQATKDKKGSYVNVGLKKYAVIDKYIQPGVRVTVKLDESSKDKKKLAGTVVSPAEPREQLGTYWGYTMRFATSLKEVWTESPYKKGYDLKIGTSERGTSCVDDRDFKLPPFEHVLIVFGGVAGIEECTSADESIAVNGDQAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLMSN 386
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Match: A0A024UFG5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UFG5_9STRA) HSP 1 Score: 348 bits (893), Expect = 1.620e-109 Identity = 177/330 (53.64%), Postives = 228/330 (69.09%), Query Frame = 2
Query: 854 RKHTLSIAIPGSVVDNAQNRELKTYLVGEIARAAAVFEVDEIVVYDDLSVSRKGQGGVRDDSASVGGVGFNAATTTGSGGSGSGGDRNNPN---VFMARLLQYAETPQYLRKQLFPMHSSLRLAGLLNPLDAPHHMRADDLCPFREGVVLDRVTKKGAGSFVDIGKRKEARIDRPLEPGVRVTVKLDKGDPCKKNHKGRAVPPSAPREELGLYWGYQTRLASGMADLLAGCPYKGGYDLTVGTSERGTVTVDSSEFALPKYRHALVVFGGVQGIEATVDADESLQLPGSESSALFDMWVNTCPGQGSRTIRTEEAVLITLARLRPHALRN 1834
R T+SIAIPGS++DNAQ +ELKTYL G+IARA A+F+VDEIVV+DD + G+ D+ NNPN VF+ R+LQY ETPQYLRK LFP+H+ L+ AGLLNPLD PHHMR D FREGVV+D+ K+ GS V++G +K A ID+ L+PGVRVTV+LD+ KK G V P+ PRE+ GLYWGY R A+ ++ + P+K GYDL +GTSERGTV+VD + F+LP + HAL+VFGGV GIE +ADE++++ G + LFDMWVNTCP QGSRTIR+EEA+LI+++ LRPH +RN
Sbjct: 94 RFFTVSIAIPGSIIDNAQTKELKTYLAGQIARACAIFQVDEIVVFDD----QLGKNANNQDATKK---------------------YNNPNDCHVFLGRILQYLETPQYLRKALFPVHNDLKYAGLLNPLDCPHHMRGDVWSEFREGVVVDQPLKEKHGSHVNVGLQKFAVIDKHLQPGVRVTVQLDESSKDKKKLAGTVVSPAEPREQKGLYWGYTMRFATSISKVWQESPFKNGYDLKIGTSERGTVSVDDASFSLPSFEHALIVFGGVSGIEECANADETIEVTGDRAHTLFDMWVNTCPQQGSRTIRSEEAILISMSALRPHLVRN 398 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.977.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig106.977.1 >prot_C-linearis_contig106.977.1 ID=prot_C-linearis_contig106.977.1|Name=mRNA_C-linearis_contig106.977.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=568bp MSTLEVVGSPRKAASPKPPPTSNGSSSSISSSSSISHVPHADDELASTSKback to top mRNA from alignment at C-linearis_contig106:148743..155237+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig106.977.1 ID=mRNA_C-linearis_contig106.977.1|Name=mRNA_C-linearis_contig106.977.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6495bp|location=Sequence derived from alignment at C-linearis_contig106:148743..155237+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig106:148743..155237+ >mRNA_C-linearis_contig106.977.1 ID=mRNA_C-linearis_contig106.977.1|Name=mRNA_C-linearis_contig106.977.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3408bp|location=Sequence derived from alignment at C-linearis_contig106:148743..155237+ (Chordaria linearis ClinC8C monoicous)back to top |