mRNA_C-linearis_contig106.1000.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig106.1000.1
Unique NamemRNA_C-linearis_contig106.1000.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: D7FSQ4_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSQ4_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 5.440e-177
Identity = 265/331 (80.06%), Postives = 293/331 (88.52%), Query Frame = 3
Query:  183 LLLLRCLRIPLQ-ARAFI----VRTTADSIITWRGGSSTGVPAXXXXXXXXXXXXXXXEEEVMIGRGPQEAVRPFVPDLLKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 1160
            LL L  L +PLQ A++F+      TT+ + + WRGGSS    A      XXXXXX   E +VMIGRGPQE VRPFVPDLL G++ALVTGGNRGIGEAITVAL+KAGA VCVMAGN+ AY DM+ERH  DD+EGTG+V WV+ADLRVP+EAIAGA+KAV+WAGGS+DILVNNAGICVLEDFMDISSD+FDEVIAINTRAPLLVSQVCL+GMIK K GKIVNITSQSAVIATKAHA+YCASKAAMDGLLHGLVCDL+QHNIQVNNIAPTVAWSDMGIKTWGDPAKS+PML++TP+GRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL
Sbjct:   10 LLPLVVLLLPLQQAQSFVGGAVSTTTSSANLRWRGGSSVDAAASTGPGEXXXXXXGQEESDVMIGRGPQEPVRPFVPDLLSGKQALVTGGNRGIGEAITVALVKAGAHVCVMAGNEAAYRDMVERHGFDDTEGTGNVYWVQADLRVPSEAIAGAQKAVDWAGGSLDILVNNAGICVLEDFMDISSDTFDEVIAINTRAPLLVSQVCLQGMIKNKSGKIVNITSQSAVIATKAHASYCASKAAMDGLLHGLVCDLAQHNIQVNNIAPTVAWSDMGIKTWGDPAKSRPMLERTPIGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 340          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: A0A835YTK4_9STRA (Putative short-chain dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK4_9STRA)

HSP 1 Score: 236 bits (601), Expect = 8.270e-71
Identity = 122/256 (47.66%), Postives = 171/256 (66.80%), Query Frame = 3
Query:  387 PFVPDLLKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 1154
            PF P LL  R+A+VTGGN GIG AIT AL+KAGA   V+A +K  +  ML+ H+       GS  +++ADL      I+  + AV WA G +DILVNNAG+ +L    +   +++D+V+A+N RAP L++Q C  GMI+++ GKI+NI+SQ+  I    HAAYCASKAA+D L   +  + ++HNIQ N+I PTV  ++MG + WG  A  +PM  +TP+GRF EP E+ANMVV+L SDA  +  GQT+ ++GG T
Sbjct:    8 PFRPTLLANRRAVVTGGNDGIGVAITCALVKAGASCAVVARSKAKFDAMLDTHEFLQ----GSADFIQADLESADATISAGKAAVAWADGHVDILVNNAGVALLGPLTEYGVEAWDKVMAVNARAPFLMAQACAPGMIEQRAGKIINISSQAGTIGIADHAAYCASKAAIDALTRVMTVEWAKHNIQANSIGPTVVMTEMGKRVWGG-AAGEPMRQRTPIGRFAEPDEVANMVVYLCSDASNILCGQTLLMEGGLT 258          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: D7G8H1_ECTSI (Similar to L-xylulose reductase (XR) (Dicarbonyl/L-xylulose reductase) n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G8H1_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 9.130e-60
Identity = 111/266 (41.73%), Postives = 165/266 (62.03%), Query Frame = 3
Query:  369 PQEAVRPFVPDLLKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAY---TDMLERHDLDDSEGTGSVCWVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKK-KYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 1154
            P E   P+  D+L G+ A+VTGG+ GIG AIT+ALL+AGA V V+A ++  Y     +LE   L   + T    ++  DL         A +A EWAGG  DILVNNAG+  +   ++ S + +D  + +N RAP +++Q C + MI + + GKIV+ +S +++ A   HAAYC SKAA+ GL   +  + S+++I  N + PT+  +DMG K WG+P K  PM+D+TP+GRF EPWE+A+ VV+L S + +   GQ + +DGG T
Sbjct:    8 PAEPAFPWRSDMLAGKTAIVTGGSAGIGAAITIALLQAGASVAVLARSRSKYDKLVPLLEERKLPVDKTT----FISIDLSSTDAIRQAAVEANEWAGGCADILVNNAGVATIAPILEASVEDWDWTMNVNVRAPFIMAQECAKRMIARGQGGKIVSTSSTASLFALHDHAAYCTSKAAIQGLTKVMSAEWSKYDINCNTVGPTIVLTDMGAKAWGEPEKGDPMIDRTPLGRFAEPWEMAHGVVYLVSPSSSQMCGQMLLLDGGIT 269          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: UPI000402D86B (SDR family oxidoreductase n=1 Tax=Geminicoccus roseus TaxID=404900 RepID=UPI000402D86B)

HSP 1 Score: 193 bits (490), Expect = 1.890e-54
Identity = 112/251 (44.62%), Postives = 152/251 (60.56%), Query Frame = 3
Query:  411 GRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWV-KADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 1160
            GRKALVTG +RGIG      L  AGA +  +A +  A  +          E  G  C V +ADL         A++A+E A G+IDILVNNAG+ + E  +D S + FDEVIAIN RAPLL++Q+    MI ++ GKI+NI+SQ+ VI    HA Y ASK  ++ +   +  +LS HNIQVN + PTV  + MG K W DPA+  P L K P+GR  +P E+A++++FL+S A  +  G  I +DGGYT L
Sbjct:   12 GRKALVTGASRGIGAEACRVLADAGADIVAVARDTAALAETKAA-----VEAKGRRCLVIEADLATVEGGRRAAQQALE-AWGTIDILVNNAGMGLAESVLDASMEHFDEVIAINLRAPLLMAQLLAPAMIAQRRGKIINISSQAGVIGLLEHATYAASKGGLNAMTKVMAAELSPHNIQVNTVCPTVIMTPMGEKHWSDPARLDPFLAKVPLGRVGQPIEVADLILFLASSASDLITGDDIMIDGGYTAL 256          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: UPI0013579E7C (SDR family oxidoreductase n=2 Tax=unclassified Geminicoccus TaxID=2623055 RepID=UPI0013579E7C)

HSP 1 Score: 192 bits (488), Expect = 3.720e-54
Identity = 109/251 (43.43%), Postives = 157/251 (62.55%), Query Frame = 3
Query:  411 GRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWV-KADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 1160
            G+KA VTG ++GIG      L  AGA +  +A +++   ++       D E  G  C V +ADL    E    A++A++ A G++DILVNNAGI   E  ++ S DSFD VIAIN RAPLL++Q+   GMI ++ GKI+NI+SQ+A+I    HA Y ASK  ++ +   +V +LS HNIQVN I PTV  + +G   WGDPA+  P + K P+GR  +P E+A++++FL+S A  +  G  I +DGGYT +
Sbjct:   12 GQKAFVTGASKGIGAEACRVLADAGADIVAVARDRDGLAEIKA-----DVEAKGRRCLVVQADLASVEEGRRAAKEALD-AWGTMDILVNNAGIGCGEPILEASMDSFDRVIAINLRAPLLLTQLLAPGMIAQRRGKIINISSQAAMIGLLGHATYSASKGGLNAMTKVMVAELSPHNIQVNTICPTVIMTPLGQAYWGDPARYDPFVAKVPLGRVGQPIEVADLILFLASPASDLITGDDIMIDGGYTAV 256          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: A0A3D3FNB8_9SPIR (Short-chain dehydrogenase n=2 Tax=unclassified Treponema TaxID=2638727 RepID=A0A3D3FNB8_9SPIR)

HSP 1 Score: 192 bits (488), Expect = 4.070e-54
Identity = 110/248 (44.35%), Postives = 147/248 (59.27%), Query Frame = 3
Query:  408 KGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWV-KADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGG 1148
            +G+K LVTG  +GIG  I ++  KAGA V     N      +       +    G  CW   ADL   A   A AE AV  AGG IDILVNNAGI   E  +D+    +D  IA+N RAP L ++V   GMI++ YG IVNI+S + +     HAAYCASK  +DGL   +  +L  H I+VN +APTV  + MG + WGD AK+ P+  K P+GRF+EP E+ ++V+FL+S+A  M  G+TI +DGG
Sbjct:   12 QGKKVLVTGATKGIGRDIALSFAKAGATVSATGRNAAELAGLA-----GEIAAAGGRCWTYPADLADAAACTAMAEAAVADAGG-IDILVNNAGISFPERIVDLDVTHWDTTIAVNLRAPALTARVVARGMIERGYGVIVNISSNACMAGIDEHAAYCASKFGLDGLTKVMAVELGPHGIRVNAVAPTVVLTSMGTQVWGDAAKADPVKAKIPLGRFLEPREVTDVVLFLASEAAAMIHGETILIDGG 253          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: A0A6G6X370_9HYPH (Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6G6X370_9HYPH)

HSP 1 Score: 191 bits (484), Expect = 1.440e-53
Identity = 107/253 (42.29%), Postives = 159/253 (62.85%), Query Frame = 3
Query:  405 LKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVC-WVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 1160
            L G+ ALVTG  +GIG  I   L  AGA +  + G  EA    + R      E  G  C  + ADL      I  A  A++ + G+IDILVNNAGI +++  ++ S D +D+ +A+N RAP L+++     MI ++ GKI+NI+SQ+ ++A   HAAY ASK  ++ L   + C+ ++HNIQ N I PT+  + MG + WGDPAK +PMLD+TP+GRF +P E+A++V++L+S A  +  G+TI +DGG+T L
Sbjct:   10 LTGKAALVTGATKGIGLDICKVLADAGADIAAV-GRDEAGLAEVSRA----VEALGRKCVTIAADLASAEGPIEAARTALQ-SFGTIDILVNNAGIALIDTLLEASIDDWDKTMAVNLRAPFLLAKELAPKMIAQRAGKIINISSQAGIVAIDGHAAYSASKGGLNMLTKVMTCEWARHNIQTNAICPTIILTPMGEQVWGDPAKGKPMLDRTPLGRFGKPQEVADLVLYLASHASDLVCGETILIDGGFTAL 256          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: M2Y1V9_GALSU (Short-chain dehydrogenase/reductase SDR n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1V9_GALSU)

HSP 1 Score: 190 bits (483), Expect = 2.010e-53
Identity = 101/250 (40.40%), Postives = 155/250 (62.00%), Query Frame = 3
Query:  405 LKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYT 1154
            L G+KA+VTGGN+GIGE+I++AL   GA + ++A + E+  +++++            C +       A ++  + K +    G +DILVNNAG+  LE  ++ S D++D  + +N +AP ++SQ   +GMI++K GKI++I+S +A+ A   HAAYC SKA +  L   +  +   +NIQ N IAPTV W++MG + WG P K +PML++ P  RFV+P E+A + VFL+     M  GQTI VDGG T
Sbjct:   10 LVGKKAVVTGGNKGIGESISLALAGKGADIAIVARDTESAQNVIKK-----VRSERRFCKIYPTDLSDAASVRKSAKDILADMGRVDILVNNAGMSQLESLLEFSEDNWDRTMNVNLKAPFILSQEFAKGMIERKSGKIIHISSVAAIHAVDEHAAYCVSKAGLCMLTKMMALEWGPYNIQTNAIAPTVVWTEMGQRVWGAPEKHEPMLERIPAHRFVKPEEVAELTVFLAGPGSDMICGQTIAVDGGLT 254          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: UPI00041FB755 (glucose 1-dehydrogenase n=1 Tax=Propionicicella superfundia TaxID=348582 RepID=UPI00041FB755)

HSP 1 Score: 190 bits (483), Expect = 2.010e-53
Identity = 108/252 (42.86%), Postives = 153/252 (60.71%), Query Frame = 3
Query:  405 LKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 1160
            + G+KA+VTGG+RGIG+A  V L +AGA+V ++  +  A   + E   L  + G   V  V  D+   + A   A  A+   GG  DI+VN AGI  +    ++S + +D+ IA+N  AP   +Q  +  MI +K GK+VNI+SQ+ VIA   H AYCASK  ++ L   +  +    NIQVN +APTV  + MG K WGDPAK+ PML K P+GRF +P E+A++V+FLSS A  +  G  I +DGGYT +
Sbjct:    9 VSGKKAIVTGGSRGIGQACAVVLAEAGAEVAIVGRDTAA---LAESEALVKAAGN-PVHVVTGDVLTASGARQAARDALAALGGVADIVVNCAGIARIAPLTELSQEDWDDTIAVNLTAPFAFTQEVVGPMIAQKSGKVVNISSQAGVIALDGHGAYCASKGGINMLTKMMALEWGPSNIQVNAVAPTVILTPMGTKVWGDPAKADPMLAKIPLGRFGQPVEVADLVLFLSSSASDLITGDVILIDGGYTAI 256          
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Match: A0A7S2ZM87_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZM87_9RHOD)

HSP 1 Score: 192 bits (488), Expect = 2.360e-53
Identity = 106/252 (42.06%), Postives = 164/252 (65.08%), Query Frame = 3
Query:  405 LKGRKALVTGGNRGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWVKADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEVIAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKAAMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKTPVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL 1160
            LK RK +VTGG RGIG +I+ A ++AGA+V V+A   +  T+ + +  L +     ++     D++   EAI   ++A+E  G  +D+LVNNAG+ ++++   +S +++D+ +A+N RAP +++Q    GMI+++ GKIVN+TS         HAAY ASKAA+D L   +  +  ++NIQ N++APT+  +DMG K WGDP +  PML + P GRF EP+E+A+ V+FL+SDA     GQ +CVDGGYT +
Sbjct:   76 LKDRKCVVTGGTRGIGFSISKAFMEAGAEVAVVA--TKPPTEEVTK-SLSELGRWHAIIGDLGDIK-STEAIG--DEALEVLG-KVDVLVNNAGVALVDELETLSVEAWDKTMAVNVRAPFMLAQKFSRGMIERRAGKIVNVTSVVGSRGVHLHAAYGASKAALDHLTKNMTVEWGKYNIQTNSVAPTIVMTDMGKKAWGDPERGDPMLARIPAGRFGEPFEVADAVLFLASDAANFISGQILCVDGGYTTI 320          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig106.1000.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSQ4_ECTSI5.440e-17780.06Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
A0A835YTK4_9STRA8.270e-7147.66Putative short-chain dehydrogenase n=1 Tax=Tribone... [more]
D7G8H1_ECTSI9.130e-6041.73Similar to L-xylulose reductase (XR) (Dicarbonyl/L... [more]
UPI000402D86B1.890e-5444.62SDR family oxidoreductase n=1 Tax=Geminicoccus ros... [more]
UPI0013579E7C3.720e-5443.43SDR family oxidoreductase n=2 Tax=unclassified Gem... [more]
A0A3D3FNB8_9SPIR4.070e-5444.35Short-chain dehydrogenase n=2 Tax=unclassified Tre... [more]
A0A6G6X370_9HYPH1.440e-5342.29Glucose 1-dehydrogenase n=3 Tax=Alphaproteobacteri... [more]
M2Y1V9_GALSU2.010e-5340.40Short-chain dehydrogenase/reductase SDR n=1 Tax=Ga... [more]
UPI00041FB7552.010e-5342.86glucose 1-dehydrogenase n=1 Tax=Propionicicella su... [more]
A0A7S2ZM87_9RHOD2.360e-5342.06Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig106contigC-linearis_contig106:394459..397876 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.8
Seed ortholog evalue5.1e-142
Seed eggNOG ortholog2880.D7FSQ4
Preferred nameDCXR
KEGG rclassRC00102,RC00154,RC01491
KEGG koko:K00081,ko:K03331
KEGG ReactionR01904,R02581,R09420
KEGG Pathwayko00040,ko00590,ko00980,ko01100,map00040,map00590,map00980,map01100
KEGG ModuleM00014
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004090,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005874,GO:0005881,GO:0005886,GO:0005902,GO:0005903,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006006,GO:0006063,GO:0006064,GO:0006082,GO:0006116,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0016655,GO:0019318,GO:0019321,GO:0019323,GO:0019362,GO:0019585,GO:0019637,GO:0019640,GO:0019674,GO:0019752,GO:0022607,GO:0032787,GO:0034641,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0043621,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046395,GO:0046483,GO:0046496,GO:0050038,GO:0051167,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072524,GO:0090407,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1901135,GO:1901137,GO:1901159,GO:1901360,GO:1901564,GO:1901575,GO:1901576
EggNOG free text desc.L-xylulose reductase (NAD ) activity
EggNOG OGsKOG1207@1,KOG1207@2759
Ec32 ortholog descriptionShort-chain dehydrogenase/reductase SDR
Ec32 orthologEc-03_002930.1
EC1.1.1.10,1.1.1.184
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size1557
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig106.1000.1prot_C-linearis_contig106.1000.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig106 394853..397736 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927402.201554-UTR-C-linearis_contig106:394458..3948521622927402.201554-UTR-C-linearis_contig106:394458..394852Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 394459..394852 -
1690879680.1725929-UTR-C-linearis_contig106:394458..3948521690879680.1725929-UTR-C-linearis_contig106:394458..394852Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 394459..394852 -
1622927402.277952-UTR-C-linearis_contig106:397736..3978761622927402.277952-UTR-C-linearis_contig106:397736..397876Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 397737..397876 -
1690879680.2318738-UTR-C-linearis_contig106:397736..3978761690879680.2318738-UTR-C-linearis_contig106:397736..397876Chordaria linearis ClinC8C monoicousUTRC-linearis_contig106 397737..397876 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927402.2155573-CDS-C-linearis_contig106:394852..3950681622927402.2155573-CDS-C-linearis_contig106:394852..395068Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 394853..395068 -
1690879680.1833591-CDS-C-linearis_contig106:394852..3950681690879680.1833591-CDS-C-linearis_contig106:394852..395068Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 394853..395068 -
1622927402.2250028-CDS-C-linearis_contig106:395399..3954731622927402.2250028-CDS-C-linearis_contig106:395399..395473Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 395400..395473 -
1690879680.191232-CDS-C-linearis_contig106:395399..3954731690879680.191232-CDS-C-linearis_contig106:395399..395473Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 395400..395473 -
1622927402.2366526-CDS-C-linearis_contig106:395859..3959531622927402.2366526-CDS-C-linearis_contig106:395859..395953Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 395860..395953 -
1690879680.1988003-CDS-C-linearis_contig106:395859..3959531690879680.1988003-CDS-C-linearis_contig106:395859..395953Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 395860..395953 -
1622927402.2493024-CDS-C-linearis_contig106:396289..3964331622927402.2493024-CDS-C-linearis_contig106:396289..396433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 396290..396433 -
1690879680.206689-CDS-C-linearis_contig106:396289..3964331690879680.206689-CDS-C-linearis_contig106:396289..396433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 396290..396433 -
1622927402.2596488-CDS-C-linearis_contig106:396974..3970921622927402.2596488-CDS-C-linearis_contig106:396974..397092Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 396975..397092 -
1690879680.2146-CDS-C-linearis_contig106:396974..3970921690879680.2146-CDS-C-linearis_contig106:396974..397092Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 396975..397092 -
1622927402.267772-CDS-C-linearis_contig106:397359..3977361622927402.267772-CDS-C-linearis_contig106:397359..397736Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 397360..397736 -
1690879680.2225034-CDS-C-linearis_contig106:397359..3977361690879680.2225034-CDS-C-linearis_contig106:397359..397736Chordaria linearis ClinC8C monoicousCDSC-linearis_contig106 397360..397736 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig106.1000.1

>prot_C-linearis_contig106.1000.1 ID=prot_C-linearis_contig106.1000.1|Name=mRNA_C-linearis_contig106.1000.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=341bp
MRMLLQTPVLALQQLLLLRCLRIPLQARAFIVRTTADSIITWRGGSSTGV
PAAAAAAAEPREPTAAAEEEVMIGRGPQEAVRPFVPDLLKGRKALVTGGN
RGIGEAITVALLKAGAQVCVMAGNKEAYTDMLERHDLDDSEGTGSVCWVK
ADLRVPAEAIAGAEKAVEWAGGSIDILVNNAGICVLEDFMDISSDSFDEV
IAINTRAPLLVSQVCLEGMIKKKYGKIVNITSQSAVIATKAHAAYCASKA
AMDGLLHGLVCDLSQHNIQVNNIAPTVAWSDMGIKTWGDPAKSQPMLDKT
PVGRFVEPWEIANMVVFLSSDACTMCLGQTICVDGGYTCL*
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mRNA from alignment at C-linearis_contig106:394459..397876-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig106.1000.1 ID=mRNA_C-linearis_contig106.1000.1|Name=mRNA_C-linearis_contig106.1000.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3418bp|location=Sequence derived from alignment at C-linearis_contig106:394459..397876- (Chordaria linearis ClinC8C monoicous)
GAACAGAGAGCGACCAGCAACCTGCCACCAAGTGCCCTGTGTACGTATCA CCACCAGCAGCCCCGCCGGTCACACCAGTCTTGTGGAAAGTAGAGGACAC GGTAAAGCCAAGTCGGAAGGCGACACACAAACGCGAAACGATGCGCATGT TGTTGCAGACTCCGGTGCTCGCCCTGCAACAACTGCTACTGCTGCGGTGC CTGCGTATTCCGTTGCAAGCCCGGGCCTTTATTGTCCGCACCACTGCCGA CAGCATCATCACGTGGCGAGGGGGCTCGTCGACGGGTGTTCCCGCCGCCG CGGCAGCAGCCGCAGAACCACGAGAGCCCACTGCCGCAGCGGAAGAAGAA GTGATGATAGGACGCGGTCCGCAGGAGGCCGTGAGGCCGTTTGTGCCGGA CCTCCTGAAGGGCAGGAAGGCCCTCGTGACGGGAGGCAATCGAGGCATCG GGGAGGCCATAACGGTGGCGTTGTTGAAGGCCGGGGCCCAAGTTTGTGTC ATGGCTGGCAATAAGGAGTGGGTAACCTTTTCGAGACGTGATTTCTTAGG CCCAGGGCACGTACGTATTCTCGCTTGATGCATGTTGCCGACCGCTTGGA TTCGCTTGACGGCATCTTAGTGTGGCCTGATTCTCACACGTCCGCGTGCA AGTCACCGGCACACAAGAAGCACTCGCTCTGCCCGAATCTTGAAGTCAAA CCCGACCAAACGTCGCCATCATATTTGTCCCCTGCCCCTTCGTTCGGTTT GTTCATGCCCTCCCTGTGTCTCTCCGGCGAGTAGGGCGTACACTGATATG TTGGAAAGGCACGACCTCGACGACAGCGAGGGCACCGGCAGCGTTTGCTG GGTAAAGGCGGACCTCAGAGTGCCTGCCGAGGCCATCGCGGGGGCCGAAA AGGTGTGTGCGTGTGTTTAGTCTGTAAATGGCGTTCGCTCGCTGGTGCTC GCTCGTCGTCTAGACCGTGGCACACGGTTCTGACCCACGGCTACCCAATC TTGCCCAAACACGAAATAGTATGTTGCGCGACAGCAACAACCTCGACAGA CAAGCAATGTTTTCAGAGGGCATGGCGGTTTCGTGTCGAGAAAGCCGGGG CGTTTTTTCGTTGCGATGGCGTCAAGACCACGGGCAACGCCTTAGGCACT TGCCTTCTAGACCCCTCACGGGAACCCAACGCGCGGCTGCGCGCCCAGCC GGAAGGCATCGCGCTTCGTTTCAAGCCACTTTAGGCACCCACTTTACGCA GAGCTACAAAAGCGTCGAGAGATGATTTTGTTCGTCATGGTACTCCCCAG GCTGAATTGTTGGCAATACCGGGCGCCCCGTGCTTGTCCCCGATTTTTCG TTAGTCCCGTGCCTGGACTGGTAGCGCCTCTGTGCTGTGCTTGGTTGTCG ACTTTGCTCGATGCATTGGTGCTCGCGCTTGGACGTCTGCCAGGCCGTTG AATGGGCAGGCGGCAGCATAGACATCCTGGTCAACAACGCAGGGATCTGT GTTCTCGAAGATTTTATGGACATCTCCTCGGACAGCTTCGATGAGGTCAT CGCCATCAACACTCGCGCCCCGCTTCTGGTCTCGCAGGTACTGTAAGTGC GTAGCGAGGGTGATCGAGAAGCTTATTCATGCTGCCCCCGTGAGGATGGA CGGTCAGGAGGTTTCGTGCGATAGTATGAATGAGCCAAGTTCTGTAGTTC CTCCGTTGTCTTTGGTGAGGATAGGAAGCAAGGTGTCGGCGGAGAAGTGC AAGAACCTCTCGGACATCTAGGGAGAAGTTCAGCTGTTGAGAGTGTTTGC TTCCGCACCCCCCCGCATGCGATGCCAGCGTTTCGGGCAGCCTGCCACCC TCCCTCCCCCCCTTGCCTCCATTCCCTACTTGATGGTGTTCTTCGTTTGA CGTGGCGTCGCGGGCTATTATAGGTTTGTCTGGAGGGTATGATCAAAAAG AAGTACGGGAAGATCGTGAACATCACCTCGCAAAGCGCCGTCATCGCCAC GAAGGCGCATGCCGCATGTGAGTACATATATACTGTATTCGAAACCACGC GGGCACCCAGGCTGTGCGGTGGTAGTGGAAGCCTAGACGCGCCGAACAAT ACAGCATGAGGGCTTGTACCCCCAAACTGCAAGCGGCGAAAAGCAAGCCC CCCAAATCGTTCGTAGCACCATGAGTTTTCCATGTAGATTTCGGTCGGTT ATCTGGTGGTACACACCGAAATGTCTGTGCGCTTTGTACCATCACTGCGA GATGTAGAATGGTACGCGCGTTGAAAGCAACGATGCGAGTTGACAGCAAA CGAAGAAAGGAGAAAACAAGCAACAACATAACCAACCTCGACTCCCTGAT TTGCTGTCACGGCGCGCACGCACGCACGCACGTGTCTTTGGTCGTTGGGG CAGACTGCGCTTCGAAGGCGGCCATGGATGGGCTTTTGCACGGGTTGGTG TGCGACCTCTCTCAGCACAACATCCAGGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGAGCCCCGCCGAAAGGCAGCAGGGGTTCTTCCTCTCCCTTCGC CACTCCCTGCCTGTCCGCGGGTGTCAGGATTGAATATACCAGGATCCGAC TCCTGCATTCAGCGTTTCTCGGACTGGGTATTCAGATTGTCTGGCCATTT ACCAGCCTACCTGGCTCTTTGAGCGCAGCAGTGGAACAGCCGGTTTGGAG CTAGACTACTGCTGTAGATTGCGGGTGATCATCGCATTTACACAAACGCC CCCCCCCTGTGCATTGATGTGTGCGATGTTTTCTTTTATTTCGTCGTTGT TGTTGAAGGTAAATAATATTGCTCCTACCGTGGCCTGGTCGGACATGGGA ATCAAGACGTGGGGCGACCCGGCGAAGTCGCAGCCCATGCTCGACAAGAC GCCGGTCGGCCGCTTCGTGGAGCCGTGGGAGATCGCCAACATGGTGGTGT TCCTGAGCAGCGACGCGTGCACCATGTGTTTGGGACAAACAATCTGCGTT GACGGGGGATACACCTGTCTATGATTGTGGGGGGGTGAATCACCTGATCT TTGATTGCGCGTGCGTGGCAGGCGCGCATTGGGCAAGTGGGTGAGGTTTG ACGATTGATGGGCTGACCCGCGCGCGTGCAGGTGTTGTGCGCGCAGTGTA AACATGGTTTGTGGTGGAGGGTACACAGCTGATAAGGCGTCGTTGGGATG ACAAGCCACCAACGATGGTTGCTTGGGCAGCAGAACGCTTGGAGGGATAC CTGTGAGATGTACGTAGAAGAAAGGACCCACCCTCATGACCGTGGGTGTC GTCATCGGTCCACCATGGAATTTTCAACCAAGGAAAAATTATTTTCTAAA TATTGACCAATCAGAAAACTGCGGGCACCTTTTATCTCTCTCTCTTCATA ACGAGTCATGAATGTCGG
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Coding sequence (CDS) from alignment at C-linearis_contig106:394459..397876-

>mRNA_C-linearis_contig106.1000.1 ID=mRNA_C-linearis_contig106.1000.1|Name=mRNA_C-linearis_contig106.1000.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2046bp|location=Sequence derived from alignment at C-linearis_contig106:394459..397876- (Chordaria linearis ClinC8C monoicous)
ATGCGCATGTTGTTGCAGACTCCGGTGCTCGCCCTGCAACAACTGCTACT
GCTGCGGTGCCTGCGTATTCCGTTGCAAGCCCGGGCCTTTATTGTCCGCA
CCACTGCCGACAGCATCATCACGTGGCGAGGGGGCTCGTCGACGGGTGTT
CCCGCCGCCGCGGCAGCAGCCGCAGAACCACGAGAGCCCACTGCCGCAGC
GGAAGAAGAAGTGATGATAGGACGCGGTCCGCAGGAGGCCGTGAGGCCGT
TTGTGCCGGACCTCCTGAAGGGCAGGAAGGCCCTCGTGACGGGAGGCAAT
CGAGGCATCGGGGAGGCCATAACGGTGGCGTTGTTGAAGGCCGGGGCCCA
AGTTTGTGTCATGGCTGGCAATAAGGAATGCGCATGTTGTTGCAGACTCC
GGTGCTCGCCCTGCAACAACTGCTACTGCTGCGGTGCCTGCGTATTCCGT
TGCAAGCCCGGGCCTTTATTGTCCGCACCACTGCCGACAGCATCATCACG
TGGCGAGGGGGCTCGTCGACGGGTGTTCCCGCCGCCGCGGCAGCAGCCGC
AGAACCACGAGAGCCCACTGCCGCAGCGGAAGAAGAAGTGATGATAGGAC
GCGGTCCGCAGGAGGCCGTGAGGCCGTTTGTGCCGGACCTCCTGAAGGGC
AGGAAGGCCCTCGTGACGGGAGGCAATCGAGGCATCGGGGAGGCCATAAC
GGTGGCGTTGTTGAAGGCCGGGGCCCAAGTTTGTGTCATGGCTGGCAATA
AGGAGGCGTACACTGATATGTTGGAAAGGCACGACCTCGACGACAGCGAG
GGCACCGGCAGCGTTTGCTGGGTAAAGGCGGACCTCAGAGTGCCTGCCGA
GGCCATCGCGGGGGCCGAAAAGGGCGTACACTGATATGTTGGAAAGGCAC
GACCTCGACGACAGCGAGGGCACCGGCAGCGTTTGCTGGGTAAAGGCGGA
CCTCAGAGTGCCTGCCGAGGCCATCGCGGGGGCCGAAAAGGCCGTTGAAT
GGGCAGGCGGCAGCATAGACATCCTGGTCAACAACGCAGGGATCTGTGTT
CTCGAAGATTTTATGGACATCTCCTCGGACAGCTTCGATGAGGTCATCGC
CATCAACACTCGCGCCCCGCTTCTGGTCTCGCAGGCCGTTGAATGGGCAG
GCGGCAGCATAGACATCCTGGTCAACAACGCAGGGATCTGTGTTCTCGAA
GATTTTATGGACATCTCCTCGGACAGCTTCGATGAGGTCATCGCCATCAA
CACTCGCGCCCCGCTTCTGGTCTCGCAGGTTTGTCTGGAGGGTATGATCA
AAAAGAAGTACGGGAAGATCGTGAACATCACCTCGCAAAGCGCCGTCATC
GCCACGAAGGCGCATGCCGCATGTTTGTCTGGAGGGTATGATCAAAAAGA
AGTACGGGAAGATCGTGAACATCACCTCGCAAAGCGCCGTCATCGCCACG
AAGGCGCATGCCGCATACTGCGCTTCGAAGGCGGCCATGGATGGGCTTTT
GCACGGGTTGGTGTGCGACCTCTCTCAGCACAACATCCAGACTGCGCTTC
GAAGGCGGCCATGGATGGGCTTTTGCACGGGTTGGTGTGCGACCTCTCTC
AGCACAACATCCAGGTAAATAATATTGCTCCTACCGTGGCCTGGTCGGAC
ATGGGAATCAAGACGTGGGGCGACCCGGCGAAGTCGCAGCCCATGCTCGA
CAAGACGCCGGTCGGCCGCTTCGTGGAGCCGTGGGAGATCGCCAACATGG
TGGTGTTCCTGAGCAGCGACGCGTGCACCATGTGTTTGGGACAAACAATC
TGCGTTGACGGGGGATACACCTGTCTATGAGTAAATAATATTGCTCCTAC
CGTGGCCTGGTCGGACATGGGAATCAAGACGTGGGGCGACCCGGCGAAGT
CGCAGCCCATGCTCGACAAGACGCCGGTCGGCCGCTTCGTGGAGCCGTGG
GAGATCGCCAACATGGTGGTGTTCCTGAGCAGCGACGCGTGCACCATGTG
TTTGGGACAAACAATCTGCGTTGACGGGGGATACACCTGTCTATGA
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