mRNA_C-linearis_contig105.967.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig105.967.1
Unique NamemRNA_C-linearis_contig105.967.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI)

HSP 1 Score: 351 bits (901), Expect = 1.950e-118
Identity = 179/297 (60.27%), Postives = 216/297 (72.73%), Query Frame = 1
Query:   22 YDGGDCCEXXXXXXXXXXXXX----IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECHQAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDETTYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            YDGGDCCE                 IDP+A C NDDDIT+DM D C YV GIG+G+CD  NN   CG+DGGDCC CTC+    +DDDY C +  ++DCKD SA CFGEE  + +     DD +G  ++ +T YEF+PWEQ  PLPTV+ AVEVG KTEV V+AT +D R G S+G  GCG+ GG+GC A N+RDGI++E+ESRWSCA  L++  GPCQIE++FAEPQ+IVDIQVAFWK NER RTL+V++NGELTHTHESY+ STFNTLGV   E  TVMLES  LLS+EWISL EV
Sbjct:   10 YDGGDCCECTCEGDDDDYKCMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESV--WDDDYTCGEDAFFDCKDPSAACFGEETAMGNG----DDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 4.150e-116
Identity = 189/313 (60.38%), Postives = 222/313 (70.93%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX-----------IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDET-TYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            NN   C YDGGDCCE                        IDP A C +DDDIT+DMV+ C YV GIGNG+CD  NN   CG+DGGDCC CTC+    YDDDY C  + G +DCKD +A CFGEE         +DDFS   T+D+  +YEF+PWE+   LPTV+GAVEVG KTEVGV++T +D RPG S+G AGCG+ GG GC A N+RDGI SE+ESRWSCAT LV+  GPCQIE+TFAEPQ I+DIQVAFWK NER RTL+VH+NGE+THTHESY+ +TFNTLGV   +V+TVMLES  LLSDEWISL EV
Sbjct:  208 NNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESP--YDDDYSCSSEYGSFDCKDPNASCFGEEPT------GSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 509          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 2.470e-111
Identity = 180/306 (58.82%), Postives = 221/306 (72.22%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX----IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDET-TYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            NN   C YDGGDCCE                 IDP A C +DD +T+DM+D C Y+  +GNG+CD++NNN LC +DGGDCC+CTC+    ++DDY C  + G ++CKD +A CFGEE         +DDFS   T+D+  +YEF+PWE+   LPTV+GAVEVG KTEVGV++T +D RPG      GCG+ GG GC AAN+RDGI SE+ESRWSCAT LV+  GPCQIE+TFAEPQ IVDIQVAFWK NER RTL+V++NGE+THTHESY+ +TFNTLGV   +V+TVMLES  LLSDEWISL EV
Sbjct:  192 NNNAACAYDGGDCCECTCEPNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESA--WNDDYTCSSEHGTFNCKDPNASCFGEETT------GSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGDD----GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 482          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 1.980e-109
Identity = 184/307 (59.93%), Postives = 208/307 (67.75%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX-----IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDETTYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEVR 900
            NN   C YDGGDCCE                  IDP A C NDDD+T+DMV+ C YV GIGNG+CD  NN   CG+DGGDCC CTC     YDDDY C  + GY+DC+D SA CFGE     D     DD+         +YEF+ WE+   LPTV  AVEVG KTEVGV+AT +D RPG S G  GCG+ GG GC A N+RDGI S++ESRWSCATSLV   GPCQIE+TFAEPQ+IVDIQVAFW  NER  TL+VH+NGELTHTHESY   TFNTLGV   E +TVMLES  LLSDEWISL EV+
Sbjct:  434 NNNEACGYDGGDCCECTCENERDEDYRCMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSA--YDDDYSCSSEYGYFDCQDPSASCFGEGTTGSDDFSFHDDYQ------PMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYD-DTFNTLGVTATEASTVMLESVALLSDEWISLLEVQ 731          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 8.200e-108
Identity = 171/274 (62.41%), Postives = 196/274 (71.53%), Query Frame = 1
Query:   85 IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDETTYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEVR 900
            IDP A C +DDD+T+DMV+ C YV GIGNG+CD  NN   CG+DGGDCC CTC     YDDDY C  + GY+DC+D +A CFGE     D     DD+         +YEFL WE+   LPTV  AVEVG KTEVGV+AT +D RPG S    GCG+ GG GC A N+RDGI S++ESRWSCATSLV   GPCQIE+TFAEPQ+IVDIQVAFW  NER  TL+VH+NGELTHTHESY   TFNTLGV   E +TVMLES  LLSDEWISL EV+
Sbjct:    6 IDPSAPCVDDDDVTVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSA--YDDDYSCSSEYGYFDCQDPTASCFGEGTTGSDDFSFHDDYQ------PMSYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESYD-DTFNTLGVTATEASTVMLESVALLSDEWISLLEVQ 270          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE)

HSP 1 Score: 320 bits (820), Expect = 9.790e-103
Identity = 185/362 (51.10%), Postives = 218/362 (60.22%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX-----------IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDET-TYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDV-------------------------------------------------HLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            NN   C YDGGDCCE                        IDP+A C +DDDIT+DM + C YV GIGNG+CD  NN   CG+DGGDCC CTC     YDDDY C  + G +DC+D +A CFGEE         +DD+S   T+DE  +YEF+PWE+   LPTV+GAVEVG KTEVGV+AT +D R G S+G  GCG+ GG GC A N+RDGI SE+ESRWSCAT LV+  GPCQIE+TFAEPQ I+DIQVAFWK NER RTL+V                                                 H+NGE+THTHESY+ +TFN LGV   +V+TVMLES  LLSDEWISL EV
Sbjct:  108 NNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSP--YDDDYLCSSEYGSFDCQDPNASCFGEEST------GSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 4.510e-97
Identity = 185/379 (48.81%), Postives = 218/379 (57.52%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX-----------IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDET-TYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDV------------------------------------------------------------------HLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            NN   C YDGGDCCE                        IDP+A C +DDDIT+DM + C YV GIGNG+CD  NN   CG+DGGDCC CTC     YDDDY C  + G +DC+D +A CFGEE         +DD+S   T+DE  +YEF+PWE+   LPTV+GAVEVG KTEVGV+AT +D R G S+G  GCG+ GG GC A N+RDGI SE+ESRWSCAT LV+  GPCQIE+TFAEPQ I+DIQVAFWK NER RTL+V                                                                  H+NGE+THTHESY+ +TFN LGV   +V+TVMLES  LLSDEWISL EV
Sbjct:  470 NNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSP--YDDDYLCSSEYGSFDCQDPNASCFGEEST------GSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 837          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.020e-95
Identity = 171/308 (55.52%), Postives = 198/308 (64.29%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX-----IDPDAECWNDDDITMDMVDEC-YVLGIGNGYCDDQN--NNGLCGWDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDETTYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            NN   C YDGGDCC                   IDP+A C NDDDIT+DM   C Y + IGNG+   +      + G+DGGDCC CTC     +DDDY C  +    DCKD +A CFGE     D     DD+        T+YEF+ WE+   LPTV  AVEVG KTEVGV+AT +D RP  S+   GCG  GG GC A N+RDGI S++ESRWSCAT LV   G CQIE++FAEPQ++VDIQVAFWK NER RTL VH+NGELTHTHESY+ STFNTLGV   E +TVMLES  LLSDEWISL EV
Sbjct:  304 NNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGTTGSDDFTFHDDYQ------PTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEV 605          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 2.080e-89
Identity = 146/232 (62.93%), Postives = 178/232 (76.72%), Query Frame = 1
Query:  208 WDGGDCCQCTCDPTGRYDDDYECH-QAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDET-TYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            +DGGDCC+CTC+    ++DDY C  + G ++CKD +A CFGEE         +DDFS   T+D+  +YEF+PWE+   LPTV+GAVEVG KTEVGV++T +D RPG      GCG+ GG GC AAN+RDGI SE+ESRWSCAT LV+  GPCQIE+TFAEPQ IVDIQVAFWK NER RTL+V++NGE+THTHESY+ +TFNTLGV   +V+TVMLES  LLSDEWISL EV
Sbjct:   15 YDGGDCCECTCESA--WNDDYTCSSEHGIFNCKDPNASCFGEETT------GSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGDD----GCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 231          
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 283 bits (723), Expect = 1.650e-87
Identity = 154/304 (50.66%), Postives = 194/304 (63.82%), Query Frame = 1
Query:    1 NNTPECNYDGGDCCEXXXXXXXXXXXXX----IDPDAECWNDDDITMDMVDECYVLG-IGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECHQAGYWDCKDESAPCFGEELIIIDXXXXTDDFSGTYTEDETTYEFLPWEQDGPLPTVEGAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIASEVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDVHLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEV 897
            NN  EC YD GDCC                  +DP AEC +DD  +  + D+C   G + NGYCD  NN   C +DGGDCC+CTC+P+G  D    C     +DC+D +APCF EE  + +     +D  G+ +     Y+FL  ++D  L     AVEVG KT+V V+AT YD RPG S+G  GCG+ GG+GC  AN+RDGI++E ESRWSCA+ +V GGGPCQIEY F EPQDI DI+VAFW  +ER RTL+V+ +G L  THESY+GSTFN+LGV    + TVMLES  LL +EWISL EV
Sbjct:  335 NNNKECGYDSGDCCSCTCVDGTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCTSG--FDCQDPTAPCFDEEPTLPEK----EDDDGSMS-----YDFL--DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0S3_ECTSI1.950e-11860.27LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G3F4_ECTSI4.150e-11660.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI2.470e-11158.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM92_9PHAE1.980e-10959.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI88_ECTSI8.200e-10862.41Similar to Pappalysin-2 (Pregnancy-associated plas... [more]
A0A6H5KB04_9PHAE9.790e-10351.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXR2_9PHAE4.510e-9748.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI87_ECTSI1.020e-9555.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5F4_ECTSI2.080e-8962.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JTT4_9PHAE1.650e-8750.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig105contigC-linearis_contig105:574642..577526 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score75.9
Seed ortholog evalue3.7e-11
Seed eggNOG ortholog2880.D7G2Y6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size900
Cds size900
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig105.967.1prot_C-linearis_contig105.967.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig105 574642..577526 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927397.7581868-CDS-C-linearis_contig105:574641..5747941622927397.7581868-CDS-C-linearis_contig105:574641..574794Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 574642..574794 -
1690879676.705105-CDS-C-linearis_contig105:574641..5747941690879676.705105-CDS-C-linearis_contig105:574641..574794Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 574642..574794 -
1622927397.7693987-CDS-C-linearis_contig105:576225..5767671622927397.7693987-CDS-C-linearis_contig105:576225..576767Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 576226..576767 -
1690879676.7232542-CDS-C-linearis_contig105:576225..5767671690879676.7232542-CDS-C-linearis_contig105:576225..576767Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 576226..576767 -
1622927397.780065-CDS-C-linearis_contig105:577135..5771901622927397.780065-CDS-C-linearis_contig105:577135..577190Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 577136..577190 -
1690879676.7336967-CDS-C-linearis_contig105:577135..5771901690879676.7336967-CDS-C-linearis_contig105:577135..577190Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 577136..577190 -
1622927397.7891111-CDS-C-linearis_contig105:577376..5775261622927397.7891111-CDS-C-linearis_contig105:577376..577526Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 577377..577526 -
1690879676.7442353-CDS-C-linearis_contig105:577376..5775261690879676.7442353-CDS-C-linearis_contig105:577376..577526Chordaria linearis ClinC8C monoicousCDSC-linearis_contig105 577377..577526 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig105.967.1

>prot_C-linearis_contig105.967.1 ID=prot_C-linearis_contig105.967.1|Name=mRNA_C-linearis_contig105.967.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=300bp
NNTPECNYDGGDCCECTCQGDDCLEFACIDPDAECWNDDDITMDMVDECY
VLGIGNGYCDDQNNNGLCGWDGGDCCQCTCDPTGRYDDDYECHQAGYWDC
KDESAPCFGEELIIIDDDTTTDDFSGTYTEDETTYEFLPWEQDGPLPTVE
GAVEVGDKTEVGVTATGYDERPGGSAGMAGCGDQGGDGCEAANSRDGIAS
EVESRWSCATSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKANERARTLDV
HLNGELTHTHESYSGSTFNTLGVVGYEVTTVMLESTGLLSDEWISLTEVR
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mRNA from alignment at C-linearis_contig105:574642..577526-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig105.967.1 ID=mRNA_C-linearis_contig105.967.1|Name=mRNA_C-linearis_contig105.967.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=2885bp|location=Sequence derived from alignment at C-linearis_contig105:574642..577526- (Chordaria linearis ClinC8C monoicous)
AACAACACGCCTGAGTGCAATTATGATGGTGGAGACTGCTGCGAATGTAC GTGCCAGGGGGACGACTGCCTCGAATTCGCCTGCATCGACCCCGACGCAG AATGCTGGAACGACGACGACATCACGATGGACATGGTCGACGAATGCTAC GTGAGTAGTGCAGGACTGCGCTCGATTGGCGAACAGCACTCCTGCTGCGG TATTGCCTTTGAAATGTGTTAACAGCGGACTACGTCTGCAGTTGAAGGAC AAGTGTTGCTCGGAAGGCACATAAAACCTCCCTTCGACGCGCACTCCTCA CGTCTAACTCCGCTTGAATCCTTCCGTTCTCCGCAGGTTCTCGGCATCGG CAATGGTTACTGCGATGATCAGAACAACAACGGGCTTTGCGGTAAGAGCT TCCCTAACTTGACCAGAAATTCGGCCGACGTCGTGTCGTGTTGGTCGTTA GAGTCGAGTGCGAGATACAGCCAAAGGGCCGTCAAAGATGTGCAACACAT CATTGCGCAACGAAAGAGGGTGCCGAGTTTTTTCAGGGTTCCCGTTTACG GCTAAACCCGGCGGCAATGCCGGATAGACCCAATCCTCGCCAGTCAAAGC CATGAAATTAGCGTTTATCTTACTTGTCCTTCGAAGTCTCTGGCTTATTC TTGCCGTCAATGTGGTACGGTACGATGGAATACCTGTTATCTTGTTTGAG CCCGTCCTTCCCCTTCGAGATAAATCTGCCACTTGCGCTTGCTGATCACA ATGCACAAGGCTGGGACGGCGGAGATTGCTGTCAATGTACATGCGACCCA ACCGGGCGCTATGACGATGACTACGAATGCCACCAAGCCGGCTACTGGGA CTGCAAGGACGAGAGCGCCCCGTGCTTCGGCGAGGAACTCATTATCATTG ACGACGACACCACGACCGACGATTTTTCCGGCACCTACACCGAAGACGAA ACGACGTACGAGTTCCTCCCTTGGGAGCAGGACGGACCCCTCCCTACCGT CGAAGGCGCCGTTGAGGTCGGCGACAAGACCGAGGTCGGGGTGACGGCTA CCGGTTACGACGAACGCCCCGGCGGGAGCGCCGGCATGGCTGGCTGCGGC GATCAAGGGGGTGACGGCTGCGAAGCGGCCAACTCCCGCGACGGTATTGC CAGCGAGGTCGAGTCCAGGTGGTCTTGCGCCACCAGCCTCGTGGAAGGCG GAGGTCCCTGCCAGATCGAGTACACGTTCGCCGAGCCCCAGGACATCGTG GACATCCAGGTCGCCTTCTGGAAAGCGAATGAGCGGGCCCGTACGCTGGA CGTGAGTCAGAGAGTAAAGACGGGAAACTTCAAGTTCGACGCTTGAAGAA GTTTTTCAGCTTCTGCATTGCCCTTCTTGTTGAGAGCAGCACGATAGGCT GGGATGGTCTACATGAAGAAGTAGTGCATGTTGGAATCGAACGCCAGCAT AGCGAGAGAGAGAGAGAGAGAGAGAGCGAGTAGCGGCCCGCCTTGTGGCG TGTTGGATTGCCGGAACTGTCCGCTGTTCAGATAGCCGATCATGCGCTCC GATCCATCGTGTTGTGCTGATCGTGAGTCACCTGTCACCGAAACTCGCCC ACAGGTCTACATCAACGGTGAAATGACCATGACCCACGAATCCTACGCTG GGCCGACCTTCAACGAGCTTGTTGTAGTTGCCAACGGAGTCACCACGGTC ATGCTAGAGTCCAGTGGGTCCACGGCAAGCGAGTGGGTTAGCCTTATCGA GGTCAGTGGGAGCACGGAAAGTCGTATCGGCTCTGGTATGCGCTCAGATC GAATGTTTCTCGCAACTCTGACGAAATGTCTGCTATTCGTTCTTCCCCTG CCACCTTGTCGAAGTAATCAGTTCGTTTCTATGTAGGAAGGATAATTGGT CAGTCTCACTTAGATCGATGCCGTCATCATACTCTCTGGACATTCTTCAA TACCGACGTTCGCGACTGACGTGGACAATGGACACGCTGCTGTCCGTTTT ATTTGAGCGAGGAAACAACTGGGGGCCCAACAGAGGAGATTTCTGCCACT TGCTCATCCAGCGCCAATTGTTCGACCAGCTGTCCTCACCTATACATACA CCATACGGGCTCCTTCAACCAATGCAGGTGCTCATCTTCGTCAAGCCCGA CGAGGAGTCCCTCCCTACCGTCGACGGCGCCGTCGAGGTCGGCGACAAGG CCGAGGTCGGGGTGACGACCACCGCTCATGATGTGCGCCCCGGCGCGAGC GCCGGTATGGCTGGCTGCGGCGTGGAAGGAGGCGACGGCTGCGAAGGGCC TCTCACCCGTGACGGTGTCACCAACGACATCGAGTCCAGGTGGTCTTGCG CCACGAGCATCGTCGAAGGCGGAGGTCCCTGCCAGATCGAGTACACGTTC GCCGCGCCCCAGAACATCGTGGACATCCAGGTCGCCTTCCGGAAGGCGAA CGAGCGCATCCGAACCCTTGACGTGAGAGAGAGACGAAAGTACATGGTAG CAGGGTTAAACTTTGACACTCCCGTCCAGTTGCGAGCTGTACCGTAGGCT AGGATGGTCTGGAAGTTCGGAGCGCACCCTCCCACGGTTGGAAGCGATTG CTGACGTGGCGAGAGGCGTCTCCGACCCATACTGCCGTGACGTTTTCCTC TTCAGCAACCCGAATATGGCTTGTCCATGCCATCCTGTTGTGCTGATGTG TGTCACTTGCCCCCCGAACTCGTCCGCCACAGGTACACCTCAATGGTGAA CTGACTCACACGCACGAGTCCTACTCTGGGTCGACCTTCAACACGCTCGG TGTGGTTGGTTACGAGGTGACCACGGTCATGCTGGAATCCACCGGGCTCC TGTCAGACGAGTGGATCAGTCTCACCGAGGTTAGG
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Coding sequence (CDS) from alignment at C-linearis_contig105:574642..577526-

>mRNA_C-linearis_contig105.967.1 ID=mRNA_C-linearis_contig105.967.1|Name=mRNA_C-linearis_contig105.967.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at C-linearis_contig105:574642..577526- (Chordaria linearis ClinC8C monoicous)
AACAACACGCCTGAGTGCAATTATGATGGTGGAGACTGCTGCGAATGTAC
GTGCCAGGGGGACGACTGCCTCGAATTCGCCTGCATCGACCCCGACGCAG
AATGCTGGAACGACGACGACATCACGATGGACATGGTCGACGAATGCTAC
AACAACACGCCTGAGTGCAATTATGATGGTGGAGACTGCTGCGAATGTAC
GTGCCAGGGGGACGACTGCCTCGAATTCGCCTGCATCGACCCCGACGCAG
AATGCTGGAACGACGACGACATCACGATGGACATGGTCGACGAATGCTAC
GTTCTCGGCATCGGCAATGGTTACTGCGATGATCAGAACAACAACGGGCT
TTGCGGTTCTCGGCATCGGCAATGGTTACTGCGATGATCAGAACAACAAC
GGGCTTTGCGGCTGGGACGGCGGAGATTGCTGTCAATGTACATGCGACCC
AACCGGGCGCTATGACGATGACTACGAATGCCACCAAGCCGGCTACTGGG
ACTGCAAGGACGAGAGCGCCCCGTGCTTCGGCGAGGAACTCATTATCATT
GACGACGACACCACGACCGACGATTTTTCCGGCACCTACACCGAAGACGA
AACGACGTACGAGTTCCTCCCTTGGGAGCAGGACGGACCCCTCCCTACCG
TCGAAGGCGCCGTTGAGGTCGGCGACAAGACCGAGGTCGGGGTGACGGCT
ACCGGTTACGACGAACGCCCCGGCGGGAGCGCCGGCATGGCTGGCTGCGG
CGATCAAGGGGGTGACGGCTGCGAAGCGGCCAACTCCCGCGACGGTATTG
CCAGCGAGGTCGAGTCCAGGTGGTCTTGCGCCACCAGCCTCGTGGAAGGC
GGAGGTCCCTGCCAGATCGAGTACACGTTCGCCGAGCCCCAGGACATCGT
GGACATCCAGGTCGCCTTCTGGAAAGCGAATGAGCGGGCCCGTACGCTGG
ACGCTGGGACGGCGGAGATTGCTGTCAATGTACATGCGACCCAACCGGGC
GCTATGACGATGACTACGAATGCCACCAAGCCGGCTACTGGGACTGCAAG
GACGAGAGCGCCCCGTGCTTCGGCGAGGAACTCATTATCATTGACGACGA
CACCACGACCGACGATTTTTCCGGCACCTACACCGAAGACGAAACGACGT
ACGAGTTCCTCCCTTGGGAGCAGGACGGACCCCTCCCTACCGTCGAAGGC
GCCGTTGAGGTCGGCGACAAGACCGAGGTCGGGGTGACGGCTACCGGTTA
CGACGAACGCCCCGGCGGGAGCGCCGGCATGGCTGGCTGCGGCGATCAAG
GGGGTGACGGCTGCGAAGCGGCCAACTCCCGCGACGGTATTGCCAGCGAG
GTCGAGTCCAGGTGGTCTTGCGCCACCAGCCTCGTGGAAGGCGGAGGTCC
CTGCCAGATCGAGTACACGTTCGCCGAGCCCCAGGACATCGTGGACATCC
AGGTCGCCTTCTGGAAAGCGAATGAGCGGGCCCGTACGCTGGACGTACAC
CTCAATGGTGAACTGACTCACACGCACGAGTCCTACTCTGGGTCGACCTT
CAACACGCTCGGTGTGGTTGGTTACGAGGTGACCACGGTCATGCTGGAAT
CCACCGGGCTCCTGTCAGACGAGTGGATCAGTCTCACCGAGGTTAGGGTA
CACCTCAATGGTGAACTGACTCACACGCACGAGTCCTACTCTGGGTCGAC
CTTCAACACGCTCGGTGTGGTTGGTTACGAGGTGACCACGGTCATGCTGG
AATCCACCGGGCTCCTGTCAGACGAGTGGATCAGTCTCACCGAGGTTAGG
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