mRNA_C-linearis_contig105.966.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 729 bits (1881), Expect = 6.350e-255 Identity = 382/698 (54.73%), Postives = 443/698 (63.47%), Query Frame = 1 Query: 109 CYDSWIGDGYCDNRNNNELCNYDGGDCCECTC--------DPGSSDDDYRCGQSND-FACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSW-------------------DDDFVCTDD-----------------------------------------------------ATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYA-MSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 C S +GDGYCD NNNE+C YDGGDCCECTC P DDD+ C FACIDPAAPCV+DDDIT D+VENC Y G+G+GWC NNNE CGYDGGDCC+CTCVAP D+ W D C DD +++ACIDPAAPCVDDD T ++++NC YP IGNGWCD DNN C YDGGDCCECTC + E DDDWAC +N FAC+DP A CVDDD +T+DM+ENC A I +G+C N PEC YDGGDCC CTC D DDD+ +AC+DPEA CV+DD +TVDM C +P +G+GWCD GNN C YDGGDCCECTCE + D Y C EF+C+DP A C +DD++TIDM ENC YV GIG+G+C NN ECG+DGGDCC CTC+S YDDD+ CS+ F+C+D SA CFGE T DDF+ + DDY MSYEFV WE+ LPT AVEVG KTEVGV+AT +D RPG S G GCGE GG GC A N+RDGI S +ESRWSC TSLV GPCQ+E+TFAEPQ+IVDIQVAFW NER TL+V+ NGE THTHESY TFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 54 CDTSELGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLE---DDDWACRNN--FACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQN--DVDDDWX---XXXFACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCENER----DEDYR-CMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSA--YDDDYSCSSEYGYFDCQDPSASCFGEGT-TGSDDFS--FHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEV 730
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 665 bits (1715), Expect = 3.820e-233 Identity = 329/534 (61.61%), Postives = 383/534 (71.72%), Query Frame = 1 Query: 361 MGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYD--DDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 M NNN C YDGGDCC+CTC N+ C + +ACIDP APCVDDD T ++++NC YP IG+GWCD+DNN C YDGGDCCECTC E S DDDW C + FAC+DP A CVDDD +T+DM+ENC + I +G+C N PEC YDGGDCC CTC+ DDD+ C +AC+DPEA CVDDD +TVDM E C +P IGNGWCD NN C YDGGDCCECTCE + YD DD Y+ C EFAC+DP A C DDD+IT+DM ENC YV GIG+G+C NN ECG+DGGDCC CTCES YDDD+ CS+ F+CKD +A CFGEEP T DDF+ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG S+G GCGE GG GC A N+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ I+DIQVAFWK NERTRTL+V+ NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 1 MDNNNAACAYDGGDCCECTCEDTPNNK-------CGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTC---EGSEDDDWHCRN---FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCES--PYDDDWGCM---WFACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYH-CMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESP--YDDDYSCSSEYGSFDCKDPNASCFGEEP-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 509
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 632 bits (1631), Expect = 1.030e-218 Identity = 352/663 (53.09%), Postives = 426/663 (64.25%), Query Frame = 1 Query: 4 MKT-SHRWLGLLSAAVIASAVSVSAYHDYYSGSSSDCYDSWIGDGYCDNRNNNELCNYDGGDCCECTCDPGSSDDDYRCGQSNDFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITA---EIV-ENCGYPN-SIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCD-PGPDADDDYR-CSPGAGYACVDPEAPCVDDDSVTVDMLEQCHW-PSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYN-GCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEP--PTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 MKT +H WLGLL A I VS + S +S+DC + DG CD NNN C YDGGDCC CTC +D Y CG S F C+DP+A CVDDDDI + V+NC P IG+G CD NN E C YDGGDCC CTC P+ D + DD +C + A +ACIDP APCV+DDD TA E+V E CG + +G CDQ NN EC YDGGDCC CTC+ DD + C GFACIDP+A C DDDD+TVD VENC +I +G CD NN+ EC+YDGGDCC CTC P D+ DD CS +AC+DP+APCV+DD +TVDM++ C P G+GWCD NN EC YD GDCC CTC D +Y G F CVDP AEC DDD + + ++C + +GYC NN EC +DGGDCC CTCE + D C+ SGF+C+D +APCF EEP P +DD D +MSY+F+ ++D L AVEVG KT+V V+AT YD RPG S+G GCGE GG+GC AN+RDGI++ ESRWSC + +V GGGPCQ+EY F EPQDI DI+VAFW +ER RTL+VYF+G THESYAGSTFN+LG +A + TVMLE+ L NEWISLIEV Sbjct: 1 MKTPTHGWLGLLIAVAI-----VSTRVEADSTTSNDCSPDFYRDGECDTHNNNAECEYDGGDCCSCTC----QNDTYDCGVSG-FDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPD-DGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL------DDFYECGIR-GFACIDPSAECADDDDVTVDTVENCG-VRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCV-------DGTYECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCT---SGFDCQDPTAPCFDEEPTLPEKEDD-------DGSMSYDFL--DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 637 bits (1642), Expect = 6.630e-217 Identity = 378/838 (45.11%), Postives = 445/838 (53.10%), Query Frame = 1 Query: 163 LCNYDGGDCCECTC-DPGSSDDDYRCGQSND-FACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAP----ENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTC-----------------DP-GPDADDD----------------------------------------------------YRC-----------------------------------------------SPGAG-------------------------------------------------YACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYD--DDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDV------------------------------------------------------------------YFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 L YDGGDCCECTC +P DDD+ C + FACIDP A CVDDDDITV+I +NCD G+G+GWCD NNNE CGYDGGDCC+CTCV+P +D DDD+ C + ACIDP APCVDDDDITA +VE CG+ +G+GWCD+DNN C YDGGDCCECTC AP + WDDDW +GFACIDP A CV+DDDITVD+ E+C DA N+ +G+CD NN C G C +C DP P DDD RC S G G +AC+DPEA CVDDD +TVDM+E C +P +G+GWCD GNN C YDGGDCCECTCE + YD DD Y+ CREF+C+DP+A C DD+IT+DMFENC YV GIG+G+C NN ECG+DGGDCC CTC+S YDDD+LCS+ F+C+D +A CFGEE T DD++ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV+AT +D R G S+G GCGE GG GC A N+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ I+DIQVAFWK NERTRTL+V + NGE THTHESY +TFN LG TA +V TVMLE+ L S+EWISLIEV Sbjct: 18 LPGYDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCDT-WGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDD---DDDWACRN--YNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESC-DAVNMGDGYCDISNNIEAC----GACSWLSCTDTPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDWGIGDGWCDEDNNNELCGDRVIEGWESIVNATAERVVRTTVVRCGVSVKWLDNELKEEIGERREVFKQFLSEAFEESWENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLETVETRISLHLPLALRQNIYDDDWSCTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYH-CREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSP--YDDDYLCSSEYGSFDCQDPNASCFGEES-TGSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQAVFFGHCVALDNTFATVRHREDGISTRLNAQHGGGARSKSFIFLTAQTFPTQVHINGEMTHTHESYTDATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 837
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 602 bits (1553), Expect = 3.890e-207 Identity = 340/675 (50.37%), Postives = 415/675 (61.48%), Query Frame = 1 Query: 1 MMKTSHRWLGLLSAAVIASAVSVSAYHDYYSGSSSDCYDSWIGDGYCDNRNNNELCNYDGGDCCECTC-DPGSSDDDYRCGQSN-DFACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDW------------------ACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGN--NNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYA-MSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 M K S R LG+L AA I S+V C++ GDGYC +NNN C YDGGDCCECTC +P DD++ C + FACIDP APCVDDDDIT++I +NC + +GNG+CD NNNE CGYD GDCC+CTCV+P +D+ W + +D + +ACIDPAAPCVDDDD+T ++VENCGY +G+GWCD NN C YDGGDCCECTCVAP + DDW AC GFACIDP AACV+DDDITV M D +NK C DM+E C +P G+G+G+C+ NN C YDGGDCC CTC Q+ +DDD + C FAC+DP+A C +DD+IT+DMF NC+Y + IG+G+ G+DGGDCC CTC++ +DDD+ CS+ + +CKD +A CFGE T DDF T+ DDY SYEFV WE+ LPT AVEVG KTEVGV+AT +D RP S+ GCG+ GG GC A N+RDGI S +ESRWSC T LV G CQ+E++FAEPQ++VDIQVAFWK NERTRTL V+ NGE THTHESYA STFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 1 MTKHSSRLLGVLGAAAILSSVGA-------------CWEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNC-VTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDW---YCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPAN--DDWDXXXXXXXXXXXXXXXXGACG--GGFACIDPNAACVNDDDITVGM---------------DTPSNK--------------------------CGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTC--QNDFDDDWA---CTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGT-TGSDDF--TFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEV 605
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 535 bits (1379), Expect = 1.140e-182 Identity = 274/481 (56.96%), Postives = 335/481 (69.65%), Query Frame = 1 Query: 526 ITAEIVENCGYPNSI-GNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHN-AGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCD--PGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 + A + + G +++ G+G+C NN EC YDGGDCCECTC P+ D W CS N +GFAC+DP A C +D +TV+ + C D ++ +GWCD NN C YDGGDCCECTC+ D D+D + G G+AC+DP APCV+DD +TVD+ E C G+G+G+CD+ NN C YDGGDCCECTCE + G FAC+DP A C DDD +T+DM +NCDY+ +G+G+C NNN C +DGGDCC CTCES ++DD+ CS+ FNCKD +A CFGEE T DDF+ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG +GCGE GG GC AAN+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ IVDIQVAFWK NERTRTL+VY NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 21 VAANSLSSSGCWDALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGG-DHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQEC-DFWDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCD-AVGMGDGYCDMDNNNAACAYDGGDCCECTCEPN------NKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESA--WNDDYTCSSEHGTFNCKDPNASCFGEET-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 482
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 484 bits (1246), Expect = 1.590e-161 Identity = 257/480 (53.54%), Postives = 306/480 (63.75%), Query Frame = 1 Query: 670 DDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYD--DDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDV-------------------------------------------------YFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 DDDW C + FAC+DP A CVDDD +TVDM+ENC + I +G+C N PEC DDD+ C+ +AC+DPEA CVDDD +TVDM E C + +G+GWCD GNN C YDGGDCCECTCE + YD DD Y+ CREF+C+DP+A C DD+IT+DMFENC YV GIG+G+C NN ECG+DGGDCC CTC+S YDDD+LCS+ F+C+D +A CFGEE T DD++ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV+AT +D R G S+G GCGE GG GC A N+RDGI S +ESRWSC T LV GPCQ+E+TFAEPQ I+DIQVAFWK NERTRTL+V + NGE THTHESYA +TFN LG TA +V TVMLE+ L S+EWISLIEV Sbjct: 5 DDDWHCRN---FACVDPNAPCVDDDSVTVDMIENCSWSTGIGDGYCSENLNTPECEVGV-------------YDDDWSCT---RFACIDPEAACVDDDDITVDMFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYH-CREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCQSP--YDDDYLCSSEYGSFDCQDPNASCFGEES-TGSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 400 bits (1027), Expect = 2.520e-132 Identity = 189/312 (60.58%), Postives = 226/312 (72.44%), Query Frame = 1 Query: 172 YDGGDCCECTCDPGSSDDDYRCGQSND-FACIDPAAPCVDDDDITVDIVENCDYPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENCGYPNSIGNGWCDQDNNKPECNYDGGDCCECTC--VAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQ 1098 +DGGDCCECTC DDDY C ++ FAC+DP APCVDDDDIT++ NC +P G+GWCD NNNE CGYDGGDCC+CTCV N+WDDD+ C A ACIDP+APCVDDDD+T ++VENCGY S+GNGWCD++NN C YDGGDCCECTC + ++ DD + GFACIDP A CV+DDDIT+D+VENC D+ + NG+CD NN C YDGGDCCECTC+ P+ C +G+AC+DPEAPCVD+DS TVDM+E C +P GNGWCD NN EC YDGGDCCECTCEV+ Sbjct: 6 FDGGDCCECTC-VSVYDDDYSCSSTDSGFACVDPTAPCVDDDDITIEQALNC-FPREFGDGWCDQENNNEICGYDGGDCCECTCV-----NAWDDDYSCA--ANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENC-DSVAVGNGFCDMDNNNEACAYDGGDCCECTCEDQPN----QECGRWSGFACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTCEVR 303
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 374 bits (961), Expect = 2.200e-122 Identity = 189/309 (61.17%), Postives = 224/309 (72.49%), Query Frame = 1 Query: 1030 LGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCESTSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTHEGAVEVGDKTEVGVTATGYDERPGWSAGMNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVQGGGPCQVEYTFAEPQDIVDIQVAFWKANERTRTLDVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 1956 + N YDGGDCCECTCE DD Y C +F+C+DP+A C +DD+IT+DMF+NC YV GIGDG+C S NN CG+DGGDCC CTCES +DDD+ C + F+CKD SA CFGEE + D ++ + D YEFVPWEQ PLPT + AVEVG KTEV V+AT +D R G S+G GCGE GG+GC A N+RDGI++ +ESRWSC L+ GPCQ+E++FAEPQ+IVDIQVAFWK NER RTL+VY NGE THTHESYA STFNTLG TANE TVMLE+ L SNEWISLIEV Sbjct: 1 MARNVVISGYDGGDCCECTCEG-----DDDDYK-CMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNNNKEACGYDGGDCCSCTCESV--WDDDYTCGEDAF-FDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 349 bits (895), Expect = 2.260e-106 Identity = 204/423 (48.23%), Postives = 253/423 (59.81%), Query Frame = 1 Query: 172 YDGGDCCECTCDPGSSDDDYRCGQSNDFACIDPAAPCVDDDDITVDIVENCD----YPAGIGNGWCDMGNNNEGCGYDGGDCCQCTCVAPENDNSWDDDFVCTDDATYACIDPAAPCVDDDDITAEIVENC----GYPNSIGNGWCDQDNNKPECNYDGGDCCECTCVAPENSWDDDWACSHNAGFACIDPAAACVDDDDITVDMVENCHDAGNIANGWCDHGNNKPECNYDGGDCCECTCDPGPDADDDYRCSPGAGYACVDPEAPCVDDDSVTVDMLEQCHWPSGIGNGWCDLGNNTPECNYDGGDCCECTCEVQDYYDDDSSYNGCREFACVDPDAECSDDDEITIDMFENCDYVLGIGDGYCHSGNNNAECGWDGGDCCYCTCE-STSRYDDDWLCSTNGSGFNCKDESAPCFGEEPPT 1413 YDGGDCCECTC S + CG FACIDP+A CVDDD+IT DI E+C+ Y A IG+G+C NNNE C YDGGDCC+CTCV D F +ACIDP+A CVDDD+ITA+I E+C GY +GNG+C++ NN EC+YD GDCC+CTC + D ++C FAC+DP A CVDDD +T M E+C N +G+C+ NN +C YDGGDCCECTC D ++ C+ +AC+DP APCVDDD VT D LE C +G+G+CD NN C+YDGGDCCECTC D + C +F C+DP A C D+ IT+DM+E CD L +GD C NN C +D GDCC TC +S D+ CS+ F C D P F PT Sbjct: 19 YDGGDCCECTCVDAS----FTCGYGG-FACIDPSAACVDDDNITEDIAESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCV---------DAFYPCGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSD-FSC---VDFACVDPNAPCVDDD-VTEGMFEDCF---NFGDGFCNDYNNNEQCGYDGGDCCECTCVV--DWSAEFGCTE---FACIDPTAPCVDDDDVTADALENCMIEY-LGDGYCDTYNNNEICDYDGGDCCECTCGSDST--DVLVGSDCSDFVCIDPTASCFDE-SITVDMYEYCDVEL-LGDSICQPSNNFEVCDYDFGDCCEATCGVDSSGTLDELSCSS----FACVD---PRFVTPSPT 402 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.966.1 >prot_C-linearis_contig105.966.1 ID=prot_C-linearis_contig105.966.1|Name=mRNA_C-linearis_contig105.966.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=652bp MMKTSHRWLGLLSAAVIASAVSVSAYHDYYSGSSSDCYDSWIGDGYCDNRback to top mRNA from alignment at C-linearis_contig105:563215..569855- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.966.1 ID=mRNA_C-linearis_contig105.966.1|Name=mRNA_C-linearis_contig105.966.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6641bp|location=Sequence derived from alignment at C-linearis_contig105:563215..569855- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:563215..569855- >mRNA_C-linearis_contig105.966.1 ID=mRNA_C-linearis_contig105.966.1|Name=mRNA_C-linearis_contig105.966.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3912bp|location=Sequence derived from alignment at C-linearis_contig105:563215..569855- (Chordaria linearis ClinC8C monoicous)back to top |