mRNA_C-linearis_contig105.965.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 588 bits (1515), Expect = 1.410e-202 Identity = 322/608 (52.96%), Postives = 372/608 (61.18%), Query Frame = 1 Query: 199 NNNELCGYDGGDCCSCTCERDSGDSYQCNNDFACIDPAAPCVDDDDVTVDLVENCDYIQGISNGWCDMGNNNAGCGYDGGDCCSCTCVPPGDSRDDDYACSDNASDYACIDPEAACVNDDDVTVDIVENC-YPGSIGNGYCDQRNNKAVCNYDGGDCCECTCVSEGGDDDRACSQNDGFACIDPAAECVDDDDITIDMVENCHDVSRRDGCLSLTVQGYSCVAVPGLRACRCVNTSVRESCGVLPSGWNEALCLHRCFSILAPGIPFSSAPVAASPSSVSFGAGNIGNGWCDEGNNKAECDYDGGDCCECTCV--AGEEFDDD--YRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 NNN C YDGGDCC CTCE + + FACIDP APCVDDD TVD+++NCDY GI +GWCD NNN C YDGGDCC CTC S DDD+ C + +AC+DP A CV+DD VT+D++ENC + IG+GYC + N C YDGGDCC CTC S DDD C FACIDP A CVDDDDIT+DM ENC Y PV +IGNGWCDE NN C YDGGDCCECTC + ++DDD Y C E +ACIDP APCVDDD +TVDM++ C + GI CD NN EC YDGGDCC CTC+ +DD+ CS+ FDCKD +A CFGEEP T DDF+ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG S+ GCGE GG GC A N+RDGI S +ESRWSC T LV+ GPCQIE+TFAEPQ I+DIQVAFWK +ER RTL V+ NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 3 NNNAACAYDGGDCCECTCEDTPNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEG---SEDDDWHCRN----FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESPY-DDDWGCMW---FACIDPEAACVDDDDITVDMFENCE---------------Y---------------------------------------------------PV------------DIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCME---FACIDPSAPCVDDDDITVDMVENCGYVSGI-----GNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGSFDCKDPNASCFGEEP-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPGMSSGDAGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVHINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 509
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 592 bits (1527), Expect = 3.860e-201 Identity = 348/712 (48.88%), Postives = 406/712 (57.02%), Query Frame = 1 Query: 172 VADGYCDSRNNNELCGYDGGDCCSCTCER---------DSGDSYQCNND---FACIDPAAPCVDDDDVTVDLVENCDYIQGISNGWCDMGNNNAGCGYDGGDCCSCTCVPPGDSRDDD----------------YACSDNA-----------------------------------------------------------SDYACIDPEAACVNDDDVTVDIVENC-YPGSIGNGYCDQRNNKAVCNYDGGDCCECTCVSEGGDDDRACSQNDGFACIDPAAECVDDDDITIDMVENCH-DVSRRDGCLSLTVQGYSCVAVPG-LRACRCVNTSVRESCGVLPSGWN---------EALCLHRCFSILAPGIPFSSAPVAASPSSVSFGAGNIGNGWCDEGNNKAECDYDGGDCCECTCVAGEEFDDDYRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYA-MSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 + DGYCD NNNE+CGYDGGDCC CTC D D + C++ FACIDPAAPCV+DDD+T D+VENC Y++G+ +GWC NNN CGYDGGDCC CTCV P DDD +AC D + S +ACIDP A CV+DD TVD+++NC YPG IGNG+CD NN +C YDGGDCCECTC S DDD AC N FAC+DP A CVDDD +TIDM+ENC V DG S + C G AC C N + W EA C++ I PV N+G+GWCD+GNN C YDGGDCCECTC E D+DYRC E ++CIDP APCV+DD VT+DM++ C + GI CD NN EC YDGGDCC CTC +DD+ CS+ FDC+D SA CFGE T DDF+ + DDY MSYEFV WE+ LPT AVEVG KTEVGV+AT +D RPG S GCGE GG GC A N+RDGI S +ESRWSC TSLV GPCQIE+TFAEPQ+IVDIQVAFW +ER+ TL V+ NGE THTHESY TFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 59 LGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAP--PADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVSIGDGYCNMDNNNEACAYDGGDCCECTCEDTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLE-DDDWACRNN--FACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQND--------VDDDWXXXXFACIDPEAACVNDD-DITVDMFVNCEYPV------------NVGDGWCDQGNNNEACGYDGGDCCECTCE--NERDEDYRCME---FSCIDPSAPCVNDDDVTIDMVENCGYVSGI-----GNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPSASCFGEGT-TGSDDFS--FHDDYQPMSYEFVSWEETDSLPTVVDAVEVGTKTEVGVSATAHDLRPGSSGGDVGCGEVGGLGCTATNTRDGIFSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEV 730
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 553 bits (1425), Expect = 1.530e-187 Identity = 327/688 (47.53%), Postives = 397/688 (57.70%), Query Frame = 1 Query: 52 MMKTSNRWLGLLGAAVIASAVSVSAYHDYSDSSTGCYDLWVADGYCDSRNNNELCGYDGGDCCSCTCERDSGDSYQ--CNND---FACIDPAAPCVDDDDVTVDLVENCDYIQGISNGWCDMGNNNAGCGYDGGDCCSCTCVPPGDSRDDDYACSDNASDYACIDPEAACVNDDDVTVDIVENC-YPGSIGNGYCDQRNNKAVCNYDGGDCCECTCVSEGGDDD------------------RACSQNDGFACIDPAAECVDDDDITIDMVENCHDVSRRDGCLSLTVQGYSCVAVPGLRACRCVNTSVRESCGVLPSGWNEALCLHRCFSILAPGIPFSSAPVAASPSSVSFGAGNIGNGWCDEGNNKAECDYDGGDCCECTCVAGEEFDDDYRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNN---------IPECNYDGGDCCYCTCDGGDN--DDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYA-MSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 M K S+R LG+LGAA I S+V C++ DGYC +NNN CGYDGGDCC CTC+ GD + C+ D FACIDP APCVDDDD+T+++ +NC + NG+CD NNN CGYD GDCC CTCV P D DDD+ CS + S +ACIDP A CV+DDDVT+D+VENC Y +G+G+CD NN +C YDGGDCCECTCV+ +DD AC GFACIDP A CV+DDDIT+ M + CG W + + + G +G+G+C++ NN C YDGGDCC CTC +FDDD+ CT +ACIDPEA CV+DD +TVDM C++P+ DIGN + YDGGDCC CTC + DD+ CS+ + DCKD +A CFGE T DDF T+ DDY SYEFV WE+ LPT AVEVG KTEVGV+AT +D RP S+ GCG+ GG GC A N+RDGI S +ESRWSC T LV G CQIE++FAEPQ++VDIQVAFWK +ER RTL V+ NGE THTHESYA STFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 1 MTKHSSRLLGVLGAAAILSSVGA------------CWEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNC-VTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWD--DDDWYCSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGG--GFACIDPNAACVNDDDITVGM------------------------------------DTPSNKCG-----WRXXXXXXXXXXXXXXXXXXXXDMIE----NCEYPWG-VGDGYCNQQNNNELCAYDGGDCCSCTCQ--NDFDDDWACTT---FACIDPEAACVNDDDITVDMFVNCEYPV------------DIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQNAWDWDDDYSCSSEYNSLDCKDPTASCFGEGT-TGSDDF--TFHDDYQPTSYEFVHWEETESLPTVIDAVEVGTKTEVGVSATAHDVRPRSSSDDVGCGQVGGLGCTATNTRDGIVSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEV 605
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 538 bits (1386), Expect = 1.920e-181 Identity = 318/664 (47.89%), Postives = 390/664 (58.73%), Query Frame = 1 Query: 55 MKT-SNRWLGLLGAAVIASAVSVSAYHDYSDSSTGCYDLWVADGYCDSRNNNELCGYDGGDCCSCTCERDSGDSYQCN-NDFACIDPAAPCVDDDDVTVDLVENCDYIQGISNGWCDMGNNNAGCGYDGGDCCSCTCVPPGDSRDDDYACSDNASDYACIDPEAACVNDDDVTV---DIVENCYPGSI---GNGYCDQRNNKAVCNYDGGDCCECTCVSEGGDDDRACSQNDGFACIDPAAECVDDDDITIDMVENCHDVSRRDGCLSLTVQGYSCVAVPGLRACRCVNTSVRESCGVLPSGWNEALCLHRC-FSILAPGIPFSSAPVAASPSSVSFGAG--NIGNGWCDEGNNKAECDYDGGDCCECTCVAGEEFDDDYRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEP--PTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 MKT ++ WLGLL IA A+ + S +S C + DG CD+ NNN C YDGGDCCSCTC+ D+ Y C + F C+DP+A CVDDDD+ + V+NC I +G CD NN C YDGGDCCSCTC P D DD + ++ +ACIDP+A CVNDDD T ++V+ G+I +G CDQ NN C YDGGDCC CTC+ DD C GFACIDP+AEC DDDD+T+D VENC S DG L C G C C + SG + +LC F+ + P P + + G N G+GWCD+ NN EC YD GDCC CTCV G Y C G+ C+DP A CVDDD + + D C + + CD NN EC YDGGDCC CTC+ +D S + SGFDC+D +APCF EEP P +DD D +MSY+F+ ++D L AVEVG KT+V V+AT YD RPG S+ GCGE GG+GC AN+RDGI++ ESRWSC + +V GGGPCQIEY F EPQDI DI+VAFW DER+RTL VYF+G THESYAGSTFN+LG +A + TVMLE+ L NEWISLIEV Sbjct: 1 MKTPTHGWLGLL----IAVAIVSTRVEADSTTSNDCSPDFYRDGECDTHNNNAECEYDGGDCCSCTCQNDT---YDCGVSGFDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL----DDFYECGIR-GFACIDPSAECADDDDVTVDTVENCGVRSIGDGQCDLDNNREEC-HYDGGDCCSCTCQVPDDD-----SGDDGSLCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCVDGT-----YECG-IVGFDCVDPSAECVDDDYPSTGVTDDCG-----NAGTVANGYCDFDNNKEECAYDGGDCCECTCEPSGLEDGSDSCT-SGFDCQDPTAPCFDEEPTLPEKEDD-------DGSMSYDFL--DEDDLLTVGTDAVEVGTKTDVSVSATAYDTRPGSSSGDVGCGEAGGNGCSPANTRDGISNETESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEV 625
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 507 bits (1305), Expect = 3.050e-171 Identity = 300/660 (45.45%), Postives = 356/660 (53.94%), Query Frame = 1 Query: 52 MMKTSNRWLGLLGAAVIASAVSVSAYHDYSDSSTGCYDLWVADGYCDSRNNNELCGYDGGDCCSCTCERDSGDSYQ--CNND---FACIDPAAPCVDDDDVTVDLVENCDYIQGISNGWCDMGNNNAGCGYDGGDCCSCTC-VPPGDSRDDDY--ACSDNASDYACIDPEAACVNDDDVTVDIVENCYPGSIGNGYCDQRNNKAVCNYDGGDCCECTCVSEGGDDDRACSQNDGFACIDPAAECVDDDDITIDMVENCHDVSRRDGCLSLTVQGYSCVAVPGLRACRCVNTSVRESCGVLPSGWNEALCLHRCFSILAPGIPFSSAPVAASPSSVSFGAGNIGNGWCDEGNNKAECDYDGGDCCECTCVAGEEFDDDYRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 M K S+R LG+LGAAV+ S+V+ ++ SS+GC+D DGYC NNN CGYDGGDCC CTC+ G + C+ + FAC+DP APC +D VTV+ + CD+ + +GWCD NNN CGYDGGDCC CTC VP D D+D AC + +ACIDP A CVNDDD+TVD+ E+C +G+GYCD NN A C YDGGDCCECTC + + C GFACIDP A CVDDD +T+DM++NC Y LR +GNGWCDE NN C YDGGDCCECTC + W NDD+ CS+ F+CKD +A CFGEE T DDF+ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG +GCGE GG GC AAN+RDGI S +ESRWSC T LV+ GPCQIE+TFAEPQ IVDIQVAFWK +ER RTL VY NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 1 MTKHSSRLLGVLGAAVVLSSVAANSL-----SSSGCWDALYGDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWD-LGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEG---FACIDPSAPCVNDDDITVDVDESCDAVGMGDGYCDMDNNNAACAYDGGDCCECTC-----EPNNKCGGRSGFACIDPGAPCVDDDSVTVDMIDNCD---------------Y-------LRV--------------------------------------------------------MGNGWCDEENNNELCAYDGGDCCECTCESA---------------------------------------W---------------------------------------NDDYTCSSEHGTFNCKDPNASCFGEET-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 482
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 501 bits (1291), Expect = 5.940e-164 Identity = 299/688 (43.46%), Postives = 367/688 (53.34%), Query Frame = 1 Query: 163 DLW-VADGYCDSRNNNELCGYDGGDCCSCTCER--DSGDSYQCNNDFACIDPAAPCVDDDDVTVDLVENCDYIQGISNGWCDMGNNNAGCGYDGGDCCSCTCVPPGDSRDDDYACSDN-----ASDYACIDPEAACVNDDDVTVDIVENCYPGSIGNGYCDQRNNKAVCNYDGGDCCECTCVSEGGDDDRACSQNDGFACIDPAAECVDDDDITIDMVENCHDVSRRDG----------CLSLTVQGYSCVAVPGLRACRCVNTSVRESCGVL--------------------------------------------PSGWNEALCLHRCFSILAPGIPFSSAPVAASPSSVSFGAG------------------------------------------NIGNGWCDEGNNKAECDYDGGDCCECTCV--AGEEFDDD--YRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYA 1902 D W + DG+CD NNNE+CGYDGGDCC CTC D D + C N ACIDP APCVDDDD+T +VE C +++G+ +GWCD NNN CGYDGGDCC CTC P DDD+ D+ S +ACIDP A CVNDDD+TVD+ E+C ++G+GYCD NN C G C +C + C + GFACIDP A CVDDD T+DM++NC D DG C ++G+ ++ A R V T+V CGV +G + C + PF S + S+ ++G+GWCD+GNN C YDGGDCCECTC + ++DDD Y C E ++CIDP A CV DD +TVDM + C + GI CD NN EC YDGGDCC CTC +DD+LCS+ FDC+D +A CFGEE T DD++ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV+AT +D R GRS+ GCGE GG GC A N+RDGI S +ESRWSC T LV+ GPCQIE+TFAEPQ I+DIQVAFWK +ER RTL V + T E A Sbjct: 74 DTWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAP--PADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESCDAVNMGDGYCDISNNIEAC----GACSWLSCTDT---PNNKCGRWSGFACIDPEAPCVDDDSFTVDMIDNC-DWGIGDGWCDEDNNNELCGDRVIEGWE--SIVNATAERVVRTTVVR-CGVSVKWLDNELKEEIGERREVFKQFLSEAFEESWENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLETVETRISLHLPLALRQNIYDDDWSCTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCRE---FSCIDPNAACVSDDDITVDMFENCGYVSGI-----GNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEES-TGSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEIQA 736
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: A0A6H5KB04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 407 bits (1046), Expect = 2.900e-131 Identity = 252/567 (44.44%), Postives = 300/567 (52.91%), Query Frame = 1 Query: 475 SRDDDYACSDNASDYACIDPEAACVNDDDVTVDIVENC-YPGSIGNGYCDQRNNKAVCNYDGGDCCECTCVSEGG--DDDRACSQNDGFACIDPAAECVDDDDITIDMVENCHDVSRRDGCLSLTVQGYSCVAVPGLRACRCVNTSVRESCGVLPSGWNEALCLHRCFSILAPGIPFSSAPVAASPSSVSFGAGNIGNGWCDEGNNKAECDYDGGDCCECTCV--AGEEFDDD--YRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGV-------------------------------------------------YFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 + DDD+ C + +AC+DP A CV+DD VTVD++ENC + IG+GYC + N C E G DDD +C++ FACIDP A CVDDDDIT+DM ENC D LS +G+GWCDEGNN C YDGGDCCECTC + ++DDD Y C E ++CIDP A CV DD +TVDM + C + GI CD NN EC YDGGDCC CTC +DD+LCS+ FDC+D +A CFGEE T DD++ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV+AT +D R GRS+ GCGE GG GC A N+RDGI S +ESRWSC T LV+ GPCQIE+TFAEPQ I+DIQVAFWK +ER RTL V + NGE THTHESYA +TFN LG TA +V TVMLE+ L S+EWISLIEV Sbjct: 3 NEDDDWHCRN----FACVDPNAPCVDDDSVTVDMIENCSWSTGIGDGYCSENLNTPEC--------------EVGVYDDDWSCTR---FACIDPEAACVDDDDITVDMFENC------DYALS------------------------------------------------------------------------VGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCRE---FSCIDPNAACVSDDDITVDMFENCGYVSGI-----GNGWCDRNNNKEECGYDGGDCCSCTCQSPYDDDYLCSSEYGSFDCQDPNASCFGEES-TGSDDYS---TDDEPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSATAHDVRAGRSSGDVGCGEVGGLGCTATNTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIMDIQVAFWKGNERTRTLEVRATPSRLKTIEITSRLFWLLCCPRQHLRDCGARSKSFIFLTAQTFPTQVHINGEMTHTHESYADATFNMLGVTATDVSTVMLESVALLSDEWISLIEV 458
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 355 bits (911), Expect = 1.140e-114 Identity = 183/303 (60.40%), Postives = 215/303 (70.96%), Query Frame = 1 Query: 1099 YDGGDCCECTCVAGEEFDDDYRCTESTGYACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 YDGGDCCECTC E DDDY+C + ++CIDP APCV+DD +TVDM D C + GI CD NN C YDGGDCC CTC+ +DD+ C FDCKD SA CFGEE + D ++ + D YEFVPWEQ PLPT + AVEVG KTEV V+AT +D R GRS+ + GCGE GG+GC A N+RDGI++ +ESRWSC L++ GPCQIE++FAEPQ+IVDIQVAFWK +ER+RTL VY NGE THTHESYA STFNTLG TANE TVMLE+ L SNEWISLIEV Sbjct: 10 YDGGDCCECTC---EGDDDDYKCMQ---FSCIDPNAPCVNDDDITVDMFDNCGYVSGI-----GDGWCDSNNNKEACGYDGGDCCSCTCESVWDDDYTCGEDAF-FDCKDPSAACFGEETAMGNGDDSTGRSSDPDTEYEFVPWEQTEPLPTVDDAVEVGTKTEVSVSATAHDVRAGRSSGEVGCGEAGGNGCAANNARDGISTEIESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEV 300
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: D7FI88_ECTSI (Similar to Pappalysin-2 (Pregnancy-associated plasma protein-A2) (PAPP-A2) (Pregnancy-associated plasma protein-E1) (PAPP-E) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI88_ECTSI) HSP 1 Score: 313 bits (802), Expect = 7.810e-99 Identity = 168/276 (60.87%), Postives = 193/276 (69.93%), Query Frame = 1 Query: 1183 YACIDPEAPCVDDDSVTVDMIDLCDWPMGIDLHVASRNRCDIGNNIPECNYDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYA-MSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 +ACIDP APCVDDD VTVDM++ C + GI CD NN EC YDGGDCC CTC +DD+ CS+ FDC+D +A CFGE T DDF+ + DDY MSYEF+ WE+ LPT AVEVG KTEVGV+AT +D RPG S GCGE GG GC A N+RDGI S +ESRWSC TSLV GPCQIE+TFAEPQ+IVDIQVAFW +ER+ TL V+ NGE THTHESY TFNTLG TA E TVMLE+ L S+EWISL+EV Sbjct: 3 FACIDPSAPCVDDDDVTVDMVENCGYVSGI-----GNGWCDRNNNKEECGYDGGDCCSCTCQSAYDDDYSCSSEYGYFDCQDPTASCFGEGT-TGSDDFS--FHDDYQPMSYEFLSWEETESLPTVVDAVEVGTKTEVGVSATAHDVRPGSSGDDVGCGEVGGLGCTATNTRDGIVSDIESRWSCATSLVPDEGPCQIEFTFAEPQNIVDIQVAFWNDNERVSTLEVHVNGELTHTHESY-DDTFNTLGVTATEASTVMLESVALLSDEWISLLEV 269
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 287 bits (735), Expect = 2.020e-89 Identity = 150/225 (66.67%), Postives = 171/225 (76.00%), Query Frame = 1 Query: 1333 YDGGDCCYCTCDGGDNDDWLCSASGSGFDCKDDSAPCFGEEPPTSDDDFASTYTDDYAMSYEFVPWEQDGPLPTYEGAVEVGDKTEVGVTATGYDERPGRSAVQNGCGEDGGDGCEAANSRDGIASVVESRWSCGTSLVEGGGPCQIEYTFAEPQDIVDIQVAFWKADERIRTLGVYFNGEKTHTHESYAGSTFNTLGATANEVVTVMLEATGLTSNEWISLIEV 2007 YDGGDCC CTC+ NDD+ CS+ F+CKD +A CFGEE T DDF+ TDD MSYEFVPWE+ LPT +GAVEVG KTEVGV++T +D RPG +GCGE GG GC AAN+RDGI S +ESRWSC T LV+ GPCQIE+TFAEPQ IVDIQVAFWK +ER RTL VY NGE THTHESYA +TFNTLG TA +V TVMLE+ L S+EWISLIEV Sbjct: 15 YDGGDCCECTCESAWNDDYTCSSEHGIFNCKDPNASCFGEET-TGSDDFS---TDDQPMSYEFVPWEETEALPTVDGAVEVGTKTEVGVSSTAHDVRPG----DDGCGEVGGLGCTAANTRDGIFSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEV 231 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.965.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.965.1 >prot_C-linearis_contig105.965.1 ID=prot_C-linearis_contig105.965.1|Name=mRNA_C-linearis_contig105.965.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=669bp GRRTFFGRLLGSYRSMVMMKTSNRWLGLLGAAVIASAVSVSAYHDYSDSSback to top mRNA from alignment at C-linearis_contig105:538135..544316+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig105.965.1 ID=mRNA_C-linearis_contig105.965.1|Name=mRNA_C-linearis_contig105.965.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6182bp|location=Sequence derived from alignment at C-linearis_contig105:538135..544316+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig105:538135..544316+ >mRNA_C-linearis_contig105.965.1 ID=mRNA_C-linearis_contig105.965.1|Name=mRNA_C-linearis_contig105.965.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4014bp|location=Sequence derived from alignment at C-linearis_contig105:538135..544316+ (Chordaria linearis ClinC8C monoicous)back to top |