Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 332 |
Cds size | 306 |
Stop | 0 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927391.8458002-UTR-C-linearis_contig105:507740..507764 | 1622927391.8458002-UTR-C-linearis_contig105:507740..507764 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 507741..507764 + |
1690879672.8481076-UTR-C-linearis_contig105:507740..507764 | 1690879672.8481076-UTR-C-linearis_contig105:507740..507764 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 507741..507764 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927391.8623607-CDS-C-linearis_contig105:507764..508070 | 1622927391.8623607-CDS-C-linearis_contig105:507764..508070 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig105 507765..508070 + |
1690879672.8610091-CDS-C-linearis_contig105:507764..508070 | 1690879672.8610091-CDS-C-linearis_contig105:507764..508070 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig105 507765..508070 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.962.1 >prot_C-linearis_contig105.962.1 ID=prot_C-linearis_contig105.962.1|Name=mRNA_C-linearis_contig105.962.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=102bp
MKHLSLQRPSARPSLDSNPTAIRNPTAATQNSDHASTAPQDGRRFHLTVP TKTKEETRKRHHTADRGRPACQGPPRQDKTKQNNPKPNQNPSMLARNQRR KQ back to topmRNA from alignment at C-linearis_contig105:507741..508070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig105.962.1 ID=mRNA_C-linearis_contig105.962.1|Name=mRNA_C-linearis_contig105.962.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=330bp|location=Sequence derived from alignment at C-linearis_contig105:507741..508070+ (Chordaria linearis ClinC8C monoicous) GCCGCCTTGCTTGCTACACAAACTATGAAACATTTATCCTTACAACGACC
GTCCGCCCGTCCTAGTCTCGATAGTAATCCAACGGCAATCAGAAACCCGA
CCGCTGCTACACAAAACAGCGATCACGCTTCGACAGCACCACAAGATGGA
AGACGTTTCCACCTGACCGTCCCGACAAAGACAAAAGAAGAAACACGCAA
GCGACACCACACGGCCGACCGCGGCAGGCCAGCCTGCCAAGGCCCCCCAC
GACAAGACAAAACAAAACAAAACAACCCAAAACCAAACCAAAACCCATCC
ATGTTGGCACGCAACCAACGCCGTAAGCAA back to topCoding sequence (CDS) from alignment at C-linearis_contig105:507741..508070+ >mRNA_C-linearis_contig105.962.1 ID=mRNA_C-linearis_contig105.962.1|Name=mRNA_C-linearis_contig105.962.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at C-linearis_contig105:507741..508070+ (Chordaria linearis ClinC8C monoicous) ATGAAACATTTATCCTTACAACGACCGTCCGCCCGTCCTAGTCTCGATAG TAATCCAACGGCAATCAGAAACCCGACCGCTGCTACACAAAACAGCGATC ACGCTTCGACAGCACCACAAGATGGAAGACGTTTCCACCTGACCGTCCCG ACAAAGACAAAAGAAGAAACACGCAAGCGACACCACACGGCCGACCGCGG CAGGCCAGCCTGCCAAGGCCCCCCACGACAAGACAAAACAAAACAAAACA ACCCAAAACCAAACCAAAACCCATCCATGTTGGCACGCAACCAACGCCGT AAGCAAATGAAACATTTATCCTTACAACGACCGTCCGCCCGTCCTAGTCT CGATAGTAATCCAACGGCAATCAGAAACCCGACCGCTGCTACACAAAACA GCGATCACGCTTCGACAGCACCACAAGATGGAAGACGTTTCCACCTGACC GTCCCGACAAAGACAAAAGAAGAAACACGCAAGCGACACCACACGGCCGA CCGCGGCAGGCCAGCCTGCCAAGGCCCCCCACGACAAGACAAAACAAAAC AAAACAACCCAAAACCAAACCAAAACCCATCCATGTTGGCACGCAACCAA CGCCGTAAGCAA back to top
|