Homology
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5KGJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGJ7_9PHAE)
HSP 1 Score: 146 bits (369), Expect = 3.170e-44
Identity = 68/78 (87.18%), Postives = 70/78 (89.74%), Query Frame = -2
Query: 6 MGMAPYAGMLSKFALRNITISTQYVSMRLRFAVRRLPQPLKSRSICAAEAWFPNTCWATGARVGKWFLPLVPHQPSTS 239
MGM PYAGMLSKFAL NITIS YVS+RLRF V R+PQPLKSRSICAAEAWFPNTCWATGARVG WFLPLV HQPSTS
Sbjct: 1 MGMTPYAGMLSKFALGNITISNPYVSVRLRFEVMRVPQPLKSRSICAAEAWFPNTCWATGARVGNWFLPLVAHQPSTS 78
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5KSA7_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA7_9PHAE)
HSP 1 Score: 143 bits (360), Expect = 5.620e-42
Identity = 65/92 (70.65%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 4 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
+++L WW G+ FP LAPVAQQVFGNQA AAQ+ERDFSGC NLLT NRSRMDTYWVEMVMFL ANFE IP + IPMIA K++ +CLP R
Sbjct: 28 REILPWWRQTGRKTFPYLAPVAQQVFGNQAGAAQVERDFSGCANLLTRNRSRMDTYWVEMVMFLHANFEHIPGFKDIPMIAAKDIHTCLPPR 119
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5JVT2_9PHAE (Dimer_Tnp_hAT domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT2_9PHAE)
HSP 1 Score: 137 bits (344), Expect = 1.320e-38
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 4 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
++VL WW G+ FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL N++ IPA+ IPMIA K++R+CLP R
Sbjct: 103 REVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPR 194
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)
HSP 1 Score: 137 bits (346), Expect = 6.230e-38
Identity = 64/92 (69.57%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 4 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
++VL WW GKN FP LAPVAQQVFGNQA+ +Q+ERDFSG G LL NRSRMDTYWVE+VMFL ANF IP IPM+A KN+RSCLP R
Sbjct: 190 REVLPWWKRTGKNIFPHLAPVAQQVFGNQAAVSQVERDFSGVGILLAPNRSRMDTYWVEIVMFLNANFAHIPPLKQIPMVAAKNIRSCLPAR 281
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE)
HSP 1 Score: 137 bits (345), Expect = 6.470e-36
Identity = 62/92 (67.39%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 4 KDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
++VL WW G+ FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL N++ IPA+ IPMIA K++R+CLP R
Sbjct: 501 REVLPWWRNTGRKMFPCLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPR 592
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5KP16_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP16_9PHAE)
HSP 1 Score: 122 bits (306), Expect = 2.790e-34
Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 46 FPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
FP LAPVAQQV GNQA AAQ+ERDFS C NLLT NRSR+DTYWVEMVMFL N++ IPA+ IPMIA K++R+CLP R
Sbjct: 2 FPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTRNRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPR 79
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)
HSP 1 Score: 122 bits (305), Expect = 2.980e-30
Identity = 55/93 (59.14%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 1 PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
P +VL +W T G++ FP L VAQQ FG+Q SAA +ERDFSGCG L NRSR++ YWVEMVMFL ANF+ IP Y IP I K++R CLP +
Sbjct: 729 PTEVLSYWATTGRHSFPALKHVAQQTFGSQPSAAPVERDFSGCGLFLVPNRSRVEEYWVEMVMFLNANFKFIPKYDNIPSIDSKDIRKCLPAK 821
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5K8W6_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W6_9PHAE)
HSP 1 Score: 120 bits (301), Expect = 4.590e-30
Identity = 57/91 (62.64%), Postives = 67/91 (73.63%), Query Frame = 1
Query: 7 DVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
+VL +WG GK+ FP+L VAQQ FGNQASAA +ERDFSGCG + NRSR+D YWVEMVMFLKANF S IP I PK++R CLP +
Sbjct: 389 EVLSYWGRTGKHAFPSLKHVAQQTFGNQASAAPVERDFSGCGLFMVPNRSRVDEYWVEMVMFLKANFNSSRRIN-IPQIDPKDIRKCLPAK 478
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE)
HSP 1 Score: 118 bits (296), Expect = 3.930e-29
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 1 PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
P DVL +W GK FP+L VAQQ FG+QASAAQIERDFS CG T NRSR + YW+EMVM LK N+E IP Y IP I K++R CLP +
Sbjct: 489 PSDVLAYWNKVGKQMFPSLKYVAQQTFGSQASAAQIERDFSHCGLFSTGNRSRAEEYWLEMVMVLKGNYELIPDYKDIPSIDSKDIRKCLPAK 581
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Match:
A0A6H5KFQ8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ8_9PHAE)
HSP 1 Score: 114 bits (286), Expect = 6.040e-28
Identity = 54/93 (58.06%), Postives = 68/93 (73.12%), Query Frame = 1
Query: 1 PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTANRSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR 279
P+DVL +W G++ FP L VAQQ FG+QA AAQIERDFS G L +NR+R+D YWVEMV+FLKANF+ IP Y IP + K++R CLP +
Sbjct: 384 PRDVLNYWKQSGRHAFPALNYVAQQRFGSQAYAAQIERDFSTGGLLGASNRNRLDEYWVEMVLFLKANFQCIPGYDDIPNMDSKSIRECLPAK 476
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.941.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.17e-44 / Id = 87.18 Expect = 5.62e-42 / Id = 70.65 Expect = 1.32e-38 / Id = 67.39 Expect = 6.23e-38 / Id = 69.57 Expect = 6.47e-36 / Id = 67.39 Expect = 2.79e-34 / Id = 73.08 Expect = 2.98e-30 / Id = 59.14 Expect = 4.59e-30 / Id = 62.64 Expect = 3.93e-29 / Id = 60.22 Expect = 6.04e-28 / Id = 58.06 Sequence A0A6H5KGJ7_9PHAE A0A6H5KSA7_9PHAE A0A6H5JVT2_9PHAE A0A6H5JZQ5_9PHAE A0A6H5KZ46_9PHAE A0A6H5KP16_9PHAE A0A6H5JJJ9_9PHAE A0A6H5K8W6_9PHAE A0A6H5JB08_9PHAE A0A6H5KFQ8_9PHAE
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.941.1
>prot_C-linearis_contig105.941.1 ID=prot_C-linearis_contig105.941.1|Name=mRNA_C-linearis_contig105.941.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=93bp
PKDVLGWWGTKGKNHFPTLAPVAQQVFGNQASAAQIERDFSGCGNLLTAN RSRMDTYWVEMVMFLKANFESIPAYGAIPMIAPKNVRSCLPGR back to top mRNA from alignment at C-linearis_contig105:142722..143000+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig105.941.1 ID=mRNA_C-linearis_contig105.941.1|Name=mRNA_C-linearis_contig105.941.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=279bp|location=Sequence derived from alignment at C-linearis_contig105:142722..143000+ (Chordaria linearis ClinC8C monoicous)CCGAAGGATGTGCTCGGTTGGTGGGGTACCAAGGGCAAGAACCACTTCCC
CACCCTGGCGCCTGTCGCCCAGCAGGTGTTCGGGAACCAGGCCTCTGCTG
CGCAAATCGAGCGCGATTTCAGTGGTTGCGGTAACCTCCTGACCGCGAAT
CGGAGCCGCATGGACACGTACTGGGTGGAGATGGTGATGTTCCTCAAAGC
AAACTTCGAAAGCATCCCCGCGTACGGTGCCATCCCCATGATCGCTCCGA
AGAATGTCCGCTCGTGTCTTCCCGGGCGT back to top Coding sequence (CDS) from alignment at C-linearis_contig105:142722..143000+
>mRNA_C-linearis_contig105.941.1 ID=mRNA_C-linearis_contig105.941.1|Name=mRNA_C-linearis_contig105.941.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=558bp|location=Sequence derived from alignment at C-linearis_contig105:142722..143000+ (Chordaria linearis ClinC8C monoicous) CCGAAGGATGTGCTCGGTTGGTGGGGTACCAAGGGCAAGAACCACTTCCC CACCCTGGCGCCTGTCGCCCAGCAGGTGTTCGGGAACCAGGCCTCTGCTG CGCAAATCGAGCGCGATTTCAGTGGTTGCGGTAACCTCCTGACCGCGAAT CGGAGCCGCATGGACACGTACTGGGTGGAGATGGTGATGTTCCTCAAAGC AAACTTCGAAAGCATCCCCGCGTACGGTGCCATCCCCATGATCGCTCCGA AGAATGTCCGCTCGTGTCTTCCCGGGCGTCCGAAGGATGTGCTCGGTTGG TGGGGTACCAAGGGCAAGAACCACTTCCCCACCCTGGCGCCTGTCGCCCA GCAGGTGTTCGGGAACCAGGCCTCTGCTGCGCAAATCGAGCGCGATTTCA GTGGTTGCGGTAACCTCCTGACCGCGAATCGGAGCCGCATGGACACGTAC TGGGTGGAGATGGTGATGTTCCTCAAAGCAAACTTCGAAAGCATCCCCGC GTACGGTGCCATCCCCATGATCGCTCCGAAGAATGTCCGCTCGTGTCTTC CCGGGCGT back to top