Homology
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
D7FXU6_ECTSI (Nop domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU6_ECTSI)
HSP 1 Score: 828 bits (2139), Expect = 1.210e-296
Identity = 433/449 (96.44%), Postives = 448/449 (99.78%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQIKKYDSKAAVAGTPKTYSAGEDMVDVKEEGSE 1593
MLVLFETPAGYALFKMTNESILKDADGIYDEF+TPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNI+KKELKDKLAV+DSKLAN+IKDKLSIKC+NDSGVMELMRGIRGQLDGLLTSVGDDNL+AMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDI+EDEDMVKDLKEAAEVSMGTEITMIDIVSIK+LADQVVALS+YRLQLS+YLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKC+LAIRVDALADETDT+IGIESRSKVEMRLRQLEGGARLLEAAPKTPTQ+KKYDSKAAVAGTPKT+S GEDMV+VKEEGSE
Sbjct: 1 MLVLFETPAGYALFKMTNESILKDADGIYDEFSTPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIVKKELKDKLAVSDSKLANAIKDKLSIKCVNDSGVMELMRGIRGQLDGLLTSVGDDNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDIMEDEDMVKDLKEAAEVSMGTEITMIDIVSIKSLADQVVALSEYRLQLSEYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCALAIRVDALADETDTTIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQVKKYDSKAAVAGTPKTFSTGEDMVEVKEEGSE 449
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
A0A835YZD1_9STRA (Nop domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD1_9STRA)
HSP 1 Score: 624 bits (1610), Expect = 8.700e-218
Identity = 330/446 (73.99%), Postives = 377/446 (84.53%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQIKKYDSKAAVA-GT----PKTYSAGEDMV 1569
ML LFETPAGYALFK+ +E ++++ + EF TPEKAA+ VKL AF F DTA AVAA+ +MI+ KMGK+ KFLTKN++KKELKDKLAVADSKL IKDKL IKCINDSGVMELMRGIR QLDGLL VG+ NL+AMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EW+GWHFPEMAKI+NDNM YAK V+RMG R C+ DFSDI+ D+ + LKE AE+SMGTEIT +D+ SI ALA+QVVALS+YR+QL DYL++RM AIAPNLTI+VGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APKNKGK+SRVLAAK +LA+RVDA+ + TDT++G+ESR+KVE R+RQLEGG RL A KTP +KKYD KAA A GT P Y+ EDMV
Sbjct: 1 MLALFETPAGYALFKIADEGKVQESKDLAKEFETPEKAAKMVKLLAFSAFEDTASAVAAAADMIEGKMGKASAKFLTKNMVKKELKDKLAVADSKLGGVIKDKLEIKCINDSGVMELMRGIRLQLDGLLVGVGEQNLKAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPEMAKILNDNMHYAKCVLRMGTRDRCRAHDFSDIIGDDAIEHTLKENAEISMGTEITEMDLKSISALAEQVVALSEYRIQLYDYLKNRMAAIAPNLTILVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKVSRVLAAKTALAVRVDAMGETTDTTLGLESRAKVEARIRQLEGGTRLATAGAKTPVGVKKYDPKAAKATGTNGAAPPVYNEAEDMV 446
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
M4C0Z6_HYAAE (Nop domain-containing protein n=29 Tax=Peronosporaceae TaxID=4777 RepID=M4C0Z6_HYAAE)
HSP 1 Score: 551 bits (1419), Expect = 1.650e-188
Identity = 287/440 (65.23%), Postives = 352/440 (80.00%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARLLEAAPKTPTQIKKYDSKAAVAGTPKTYSAGEDM 1566
MLVLFET AG+ALFK+ +E+ L AD ++ +FAT EKA + VKLK F F DT +AVAA+T+M+D KMGKSL+KFL KN++ LKDKLAV+D L IK+KLSI C+NDS V E+MRGIR ++ L+T + DD+L+AM LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRV+EWFGWHFPEM KI+ DN+ YAK V++MG+R++ K+ DFSD+L ED+ ++E EVSMGT+I+ D+ +I AL +QV++L++YR QL DYL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK +LA+RVDAL D T+ +IG ++R+KVE R+RQLE G P + ++K K T TY+ DM
Sbjct: 1 MLVLFETAAGHALFKVQDEAKLASADDVFKQFATSEKATKVVKLKGFNAFKDTIEAVAAATDMVDGKMGKSLRKFLKKNVVDAGLKDKLAVSDKALGALIKEKLSIACVNDSAVNEIMRGIRANMNTLITGLKDDDLKAMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRSQVKSLDFSDVLS-EDVEASMREVCEVSMGTDISQEDLTNISALCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLENG---FSGVPNSNGKVKNEAKKYTKTETSTTYNTDADM 436
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
A0A8K1CTM6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTM6_PYTOL)
HSP 1 Score: 545 bits (1404), Expect = 4.820e-186
Identity = 288/450 (64.00%), Postives = 357/450 (79.33%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGAR-LLEAAPKTPTQIKKYDSKAAVAGTPKTYSAGEDMVDVKEEGSE 1593
MLVLFET AG+ALFK+ +ES L +AD ++ F TPEKA + +KLK F F DT +AVAA+T+M+D K+GK LKKFL KNI+ LKDKLAV+D L IK+KL I+CI+D+ V E+MRG+R ++ L++ + D++L++M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTY+MRV+EWFGWHFPEM KI+ DN+ YAK V++MG+R++ KN DFSDIL ED+ ++E EVSMGT+I+ D+ +I +L +QV++L++YR QL DYL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK KGKISRVLAAK +LA+RVDAL D T+ SIG ++R+KVE R+RQLE G ++ KT + KKY A K Y+A DM K+ S+
Sbjct: 1 MLVLFETAAGHALFKVQDESKLANADDVFKHFQTPEKANQVLKLKGFNAFKDTTEAVAAATDMVDGKVGKGLKKFLKKNIVDAGLKDKLAVSDKALGGIIKEKLGIQCIHDTAVNEIMRGVRANMNSLISGLEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYSMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGMRSQVKNLDFSDILS-EDVEASMREVCEVSMGTDISEEDVTNIASLCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKYKGKISRVLAAKTALAVRVDALGDATEASIGYDNRAKVEARVRQLENGLTGVISGKGKTKNEAKKY----VKADGAKNYNAEADMTVSKKRKSD 445
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
A0A812NHD2_SYMMI (NOP5-2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHD2_SYMMI)
HSP 1 Score: 545 bits (1405), Expect = 5.340e-186
Identity = 293/442 (66.29%), Postives = 352/442 (79.64%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGG-ARLLEAAPKTPTQIKKYDSKAAVAGTPKTYSAGEDMV 1569
ML+LFET AGYALFK+ L + I+D F +K A VKLKAF F +T +AV A+T +I++K+ K+LKKFL KNII K ++D+LAVAD+KL +K+K+ I+C++ VME+ RGIR Q+D LL V D LR+M+LGLSHSLSRYKLKFSADKVD MIVQAIGLLD+LDKEINTYAMRV+EW+GWHFPEMA+I++DNM YAK+V+RMG+RTECK DFSDIL DE + + LK+ AE SMGTEI+ D+ +IKAL +QV++LS+YR+QL DYL++RM AIAPNLT+MVGELVGARL+AHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APKNKGKISRVLAAK +LAIRVDAL D + +I +ESR KVE R+RQLEGG RL A P KYD+ A A P +S DMV
Sbjct: 1 MLLLFETSAGYALFKV-QAGKLGEVSDIWDAFQEKDKGANIVKLKAFEPFENTTEAVVAATSLIENKLDKNLKKFLKKNIISKSVEDELAVADTKLGGLLKEKMDIQCVHSDKVMEIFRGIRSQMDTLLAGVEDGALRSMQLGLSHSLSRYKLKFSADKVDIMIVQAIGLLDDLDKEINTYAMRVREWYGWHFPEMARILSDNMFYAKIVLRMGMRTECKKYDFSDILGDETLEETLKKTAETSMGTEISESDLTNIKALCEQVISLSEYRIQLFDYLKNRMAAIAPNLTMMVGELVGARLVAHAGSLLNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKNKGKISRVLAAKTALAIRVDALGDSSGPTIAVESRLKVEARIRQLEGGQGRLSIAGGAGPA---KYDAATARALAPPKFSDASDMV 438
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
A0A4D9DD53_9STRA (Nop domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DD53_9STRA)
HSP 1 Score: 545 bits (1403), Expect = 1.930e-185
Identity = 295/452 (65.27%), Postives = 355/452 (78.54%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARL-----LEAAPKTPTQIKKYDSKAAVA-GTPKTYSAGEDMVDVKEE 1584
ML+LFETPAGYALFK+ ES L+D + ++ EF PEKA+ VKLKAF F TA+AVAA++++I+S +GK LKKFL K+I KE+ ++LAVAD KL IKDKL + EL RG+R QLD LLT + D NL+ M+LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EW+GWHFPE+ KI+NDN+ YAK+VVR+G+RT K+ D SDIL D+ + + +KE+AE+SMG EI+ D+ SI++LA +VV L+ YR+ L +YL++RM AIAPNLTIMVGELVGARLIAHAGSL+NLAK PAST+QILGAEKALFRALKTKHDTPKYGLIYHASLIGQA PK+KGKISRVLAAK +LAIRVDA+ DETDTS+G E+RSKVE RLRQLEGG + + + KYD KAA+ G Y+ DMV V E
Sbjct: 1 MLLLFETPAGYALFKVLKESKLQDVENLWKEFEDPEKASSIVKLKAFRPFDGTAEAVAAASDIIESNLGKELKKFLKKSIKDKEMSEQLAVADHKLGGLIKDKLGLNIATGEIASELFRGVRTQLDSLLTGLSDSNLKQMQLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWYGWHFPELVKIVNDNVQYAKLVVRVGMRTGFKSQDLSDILGDDAVEQSVKESAEISMGQEISENDLASIRSLAQEVVDLAAYRINLFEYLKNRMHAIAPNLTIMVGELVGARLIAHAGSLLNLAKHPASTIQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAQPKHKGKISRVLAAKTALAIRVDAMGDETDTSMGEEARSKVEFRLRQLEGGHKTSLTGGMRGSSSGNGGPAKYDKKAALGEGEGDGYNEASDMVGVTTE 452
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
K3WSU8_GLOUD (Nop domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU8_GLOUD)
HSP 1 Score: 540 bits (1391), Expect = 4.440e-184
Identity = 283/441 (64.17%), Postives = 352/441 (79.82%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGAR-LLEAAPKTPTQIKKYDSKAAVAGTPKTYSAGEDM 1566
MLVLFET AG+ALFK+ +ES L AD ++ F T +KA + +KLK F F DT +AVAA+T+M+D K+GK+LKKFL KNI+ LKDKLAV+D L IK+K+ I+C++D+ V E+MRGIR ++ L++ + D++L++M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EWFGWHFPEM KI+ DN+ YAK V++MGVR+ KN DFSDIL ED+ ++E EVSMGT+I+ D+ +I +L +QV++L++YR QL DYL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK +LA+RVDAL D T+ +IG ++R+KVE R+RQLE G + KT ++KKY T KTY+ D+
Sbjct: 1 MLVLFETAAGHALFKVQDESKLASADDVFKHFETADKANKVLKLKGFNAFKDTTEAVAAATDMVDGKVGKALKKFLKKNIVDAGLKDKLAVSDKALGGLIKEKMGIQCVHDTAVNEVMRGIRANMNSLISGLEDEDLKSMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYAKCVLKMGVRSNVKNLDFSDILS-EDVEASMREVCEVSMGTDISEEDVTNISSLCEQVISLTEYRAQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARVRQLENGLTGAVSGKGKTKNEVKKY----VKPETTKTYNTEADI 436
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
L1JQ19_GUITC (Nop domain-containing protein n=3 Tax=Guillardia theta TaxID=55529 RepID=L1JQ19_GUITC)
HSP 1 Score: 535 bits (1379), Expect = 2.700e-182
Identity = 285/444 (64.19%), Postives = 353/444 (79.50%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARL-LEAAPKTPTQIKKYDSKAAVAGTPKT---YSAGEDM 1566
MLVL+ETPAGYALFK+T+E LKD D I + FA P+KA++++KLKAF F DT++A+ A+T M++S + K LKKFL KNI+KK L ++LAV ++KL IK+KL + CI D V+E+MRG+R L+ LL + +L+ MRLGL+HSL R+KLKFS DKVDTM+VQAIGLLDELDKE+NTYAMRV+EW+GWHFPEM KI+ +N+ YAKVV MG+RT C +CDFS IL DE+ ++LKEA ++SMGTEI+ DI +I++L DQV+ LS+YR+QL +YL +RM+AIAPNLT MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALK+KHDTPKYGLIYHASLIGQAAPK+KGKISRVLAAKC+L+IRVDAL+ +G+E R VE RLRQLEGG L + K KKY+SKA G K+ Y+ EDM
Sbjct: 1 MLVLYETPAGYALFKVTDEKKLKDVDDIQEVFADPDKASKAMKLKAFQKFEDTSEALVAATAMLESSLSKGLKKFLEKNIVKKGLNEELAVYETKLGKVIKEKLEVPCIYDDKVLEIMRGVRANLEVLLGGTTEQDLKTMRLGLAHSLGRHKLKFSPDKVDTMVVQAIGLLDELDKELNTYAMRVREWYGWHFPEMGKIVTENVPYAKVVKLMGMRTNCVSCDFSSIL-DEETEQELKEAVQISMGTEISDDDINNIQSLCDQVIQLSEYRVQLYEYLLNRMRAIAPNLTTMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKSKHDTPKYGLIYHASLIGQAAPKHKGKISRVLAAKCALSIRVDALSQGDIPQVGVEHRLAVENRLRQLEGGTITNLSGSAKGKPNAKKYESKADEDGMAKSSSKYNDAEDM 443
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
A0A7S1U4X5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4X5_9STRA)
HSP 1 Score: 532 bits (1371), Expect = 2.590e-181
Identity = 274/407 (67.32%), Postives = 335/407 (82.31%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGGARL 1467
MLVLFETPAGYALFK T+ +K D +Y EF T +KA+ +KLKAF F D +AVAA+T +++ + K LKKFL KN++KKELKD+LAV D+KL IK+KL I+C+ ++G+ EL+RGIR Q+D L+ +V + +R M+LGLSH LSRYKLKFS DKVDTMIVQA+GLLD+LDKEINTYAMR +EW+GWHFPEM K+IND + Y++ V +MG+RT C DFSDILED + LK+AA SMGTEI+ D+ +I+AL DQVV LS+YR+QL +YL++RM AIAPNLT+MVGELVGARLIAH+GSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK +LAIRVDAL + +IGIE+R+KVE R+RQL+GGARL
Sbjct: 12 MLVLFETPAGYALFKCTSPGKIKKTDDLYKEFETADKASSLLKLKAFSQFEDITEAVAAATALVEGSLHKGLKKFLNKNVVKKELKDELAVIDAKLGGLIKEKLGIECVANAGINELIRGIRSQMDALIPAVDESIMRTMQLGLSHQLSRYKLKFSPDKVDTMIVQAVGLLDDLDKEINTYAMRAQEWYGWHFPEMKKVINDTIQYSRCVRKMGMRTNCAATDFSDILEDTSVEALLKDAAMTSMGTEISEGDLNNIQALCDQVVNLSEYRVQLFEYLKNRMHAIAPNLTVMVGELVGARLIAHSGSLLNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKSALAIRVDALGETEGPTIGIEARAKVEARIRQLDGGARL 418
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Match:
A0A067CC41_SAPPC (Nop domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CC41_SAPPC)
HSP 1 Score: 522 bits (1345), Expect = 2.710e-177
Identity = 281/450 (62.44%), Postives = 347/450 (77.11%), Query Frame = 1
Query: 247 MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTFADTADAVAASTEMIDSKMGKSLKKFLTKNIIKKELKDKLAVADSKLANSIKDKLSIKCINDSGVMELMRGIRGQLDGLLTSVGDDNLRAMRLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVKEWFGWHFPEMAKIINDNMMYAKVVVRMGVRTECKNCDFSDILEDEDMVKDLKEAAEVSMGTEITMIDIVSIKALADQVVALSQYRLQLSDYLRSRMQAIAPNLTIMVGELVGARLIAHAGSLINLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAAPKNKGKISRVLAAKCSLAIRVDALADETDTSIGIESRSKVEMRLRQLEGG-ARLLEAAPKTPTQIKKYDSKAAVAGTPKTYSAGEDMVDVKEEGSE 1593
MLVLFET AG+ALFK+ +E L + D I+ FA+ +KA++ VKLKAF F DT +AVAA+ + D +GKSLKKFL K++ + DKLAV D IK+KL I+C++D V ELMRGIR ++ L++ + D +L+ M LGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRV+EWFGWHFPEM KI+ DN+ YA+ VV+MGVRT K+ DFSDIL D+ ++E EVSMGT+I+ D+++I +L +QV++L++YR QL DYL++RM AIAPNLT+MVGELVGARLIAHAGSL+NLAK PASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQ APK+KGKISRVLAAK +LA+RVDAL D T+ +IG ++R+KVE R+RQLE G + K T KKY +A A K Y+ +DM K+ +E
Sbjct: 1 MLVLFETAAGHALFKVQDEGKLANVDDIHKHFASSDKASQVVKLKAFNAFKDTTEAVAAAADCTDGTVGKSLKKFLKKHVKDAGVSDKLAVMDKAFGGIIKEKLGIQCVHDKSVDELMRGIRTHMNSLISGLEDQDLKNMTLGLSHSLSRYKLKFSADKVDTMIVQAIGLLDELDKEINTYAMRVREWFGWHFPEMGKIVTDNLQYARTVVKMGVRTNVKSLDFSDILSS-DVEASMREVCEVSMGTDISEEDVINIGSLCEQVISLTEYRGQLFDYLKNRMNAIAPNLTVMVGELVGARLIAHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQTAPKHKGKISRVLAAKTALAVRVDALGDATEATIGFDNRAKVEARMRQLENGFTGIASGKGKAKTDAKKYVKEATPAT--KVYNDADDMKVQKKRKAE 447
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig105.937.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.21e-296 / Id = 96.44 Expect = 8.70e-218 / Id = 73.99 Expect = 1.65e-188 / Id = 65.23 Expect = 4.82e-186 / Id = 64.00 Expect = 5.34e-186 / Id = 66.29 Expect = 1.93e-185 / Id = 65.27 Expect = 4.44e-184 / Id = 64.17 Expect = 2.70e-182 / Id = 64.19 Expect = 2.59e-181 / Id = 67.32 Expect = 2.71e-177 / Id = 62.44 Sequence D7FXU6_ECTSI A0A835YZD1_9STRA M4C0Z6_HYAAE A0A8K1CTM6_PYTOL A0A812NHD2_SYMMI A0A4D9DD53_9STRA K3WSU8_GLOUD L1JQ19_GUITC A0A7S1U4X5_9STRA A0A067CC41_SAPPC Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 832.8 Seed ortholog evalue 9.6e-239 Seed eggNOG ortholog 2880.D7FXU6 Preferred name NOP58 KEGG ko ko:K14565 KEGG Pathway ko03008,map03008 Hectar predicted targeting category other localisation GOs GO:0000154,GO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0001085,GO:0001091,GO:0001094,GO:0001098,GO:0001099,GO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006403,GO:0006725,GO:0006807,GO:0008134,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0015030,GO:0016049,GO:0016070,GO:0016072,GO:0016604,GO:0019899,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0030686,GO:0031428,GO:0031974,GO:0031981,GO:0032040,GO:0032991,GO:0033036,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0042274,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044452,GO:0044464,GO:0046483,GO:0048254,GO:0051117,GO:0051179,GO:0070013,GO:0070761,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1990904 EggNOG free text desc. endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) EggNOG OGs COG1498@1,KOG2572@2759 Ec32 ortholog description NOP58 subunit of the C/D ribonucleoprotein complex Ec32 ortholog Ec-23_001460.1 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko03009 Exons 13 Model size 1994 Cds size 1698 Stop 1 Start 1
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927393.261726-UTR-C-linearis_contig105:120367..120417 1622927393.261726-UTR-C-linearis_contig105:120367..120417 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig105 120368..120417 - 1690879673.7997706-UTR-C-linearis_contig105:120367..120417 1690879673.7997706-UTR-C-linearis_contig105:120367..120417 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig105 120368..120417 - 1622927393.4413798-UTR-C-linearis_contig105:127172..127418 1622927393.4413798-UTR-C-linearis_contig105:127172..127418 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig105 127173..127418 - 1690879673.9374497-UTR-C-linearis_contig105:127172..127418 1690879673.9374497-UTR-C-linearis_contig105:127172..127418 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig105 127173..127418 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927393.2875793-CDS-C-linearis_contig105:120417..120462 1622927393.2875793-CDS-C-linearis_contig105:120417..120462 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 120418..120462 - 1690879673.8131294-CDS-C-linearis_contig105:120417..120462 1690879673.8131294-CDS-C-linearis_contig105:120417..120462 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 120418..120462 - 1622927393.2984633-CDS-C-linearis_contig105:121095..121416 1622927393.2984633-CDS-C-linearis_contig105:121095..121416 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 121096..121416 - 1690879673.822633-CDS-C-linearis_contig105:121095..121416 1690879673.822633-CDS-C-linearis_contig105:121095..121416 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 121096..121416 - 1622927393.3119693-CDS-C-linearis_contig105:121705..121786 1622927393.3119693-CDS-C-linearis_contig105:121705..121786 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 121706..121786 - 1690879673.8323069-CDS-C-linearis_contig105:121705..121786 1690879673.8323069-CDS-C-linearis_contig105:121705..121786 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 121706..121786 - 1622927393.325923-CDS-C-linearis_contig105:122214..122286 1622927393.325923-CDS-C-linearis_contig105:122214..122286 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 122215..122286 - 1690879673.842484-CDS-C-linearis_contig105:122214..122286 1690879673.842484-CDS-C-linearis_contig105:122214..122286 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 122215..122286 - 1622927393.338024-CDS-C-linearis_contig105:122563..122737 1622927393.338024-CDS-C-linearis_contig105:122563..122737 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 122564..122737 - 1690879673.8526351-CDS-C-linearis_contig105:122563..122737 1690879673.8526351-CDS-C-linearis_contig105:122563..122737 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 122564..122737 - 1622927393.3488107-CDS-C-linearis_contig105:123250..123466 1622927393.3488107-CDS-C-linearis_contig105:123250..123466 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 123251..123466 - 1690879673.861336-CDS-C-linearis_contig105:123250..123466 1690879673.861336-CDS-C-linearis_contig105:123250..123466 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 123251..123466 - 1622927393.360373-CDS-C-linearis_contig105:123991..124084 1622927393.360373-CDS-C-linearis_contig105:123991..124084 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 123992..124084 - 1690879673.8715165-CDS-C-linearis_contig105:123991..124084 1690879673.8715165-CDS-C-linearis_contig105:123991..124084 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 123992..124084 - 1622927393.3748698-CDS-C-linearis_contig105:124308..124410 1622927393.3748698-CDS-C-linearis_contig105:124308..124410 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 124309..124410 - 1690879673.880046-CDS-C-linearis_contig105:124308..124410 1690879673.880046-CDS-C-linearis_contig105:124308..124410 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 124309..124410 - 1622927393.3886876-CDS-C-linearis_contig105:124585..124702 1622927393.3886876-CDS-C-linearis_contig105:124585..124702 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 124586..124702 - 1690879673.890599-CDS-C-linearis_contig105:124585..124702 1690879673.890599-CDS-C-linearis_contig105:124585..124702 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 124586..124702 - 1622927393.4014077-CDS-C-linearis_contig105:125050..125263 1622927393.4014077-CDS-C-linearis_contig105:125050..125263 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 125051..125263 - 1690879673.8987286-CDS-C-linearis_contig105:125050..125263 1690879673.8987286-CDS-C-linearis_contig105:125050..125263 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 125051..125263 - 1622927393.4108083-CDS-C-linearis_contig105:125551..125680 1622927393.4108083-CDS-C-linearis_contig105:125551..125680 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 125552..125680 - 1690879673.9074936-CDS-C-linearis_contig105:125551..125680 1690879673.9074936-CDS-C-linearis_contig105:125551..125680 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 125552..125680 - 1622927393.420394-CDS-C-linearis_contig105:126199..126289 1622927393.420394-CDS-C-linearis_contig105:126199..126289 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 126200..126289 - 1690879673.9160066-CDS-C-linearis_contig105:126199..126289 1690879673.9160066-CDS-C-linearis_contig105:126199..126289 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 126200..126289 - 1622927393.4297547-CDS-C-linearis_contig105:127127..127172 1622927393.4297547-CDS-C-linearis_contig105:127127..127172 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 127128..127172 - 1690879673.929445-CDS-C-linearis_contig105:127127..127172 1690879673.929445-CDS-C-linearis_contig105:127127..127172 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig105 127128..127172 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.937.1
>prot_C-linearis_contig105.937.1 ID=prot_C-linearis_contig105.937.1|Name=mRNA_C-linearis_contig105.937.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=566bp
MLVLFETPAGYALFKMTNESILKDADGIYDEFATPEKAAESVKLKAFMTF back to top mRNA from alignment at C-linearis_contig105:120368..127418-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig105.937.1 ID=mRNA_C-linearis_contig105.937.1|Name=mRNA_C-linearis_contig105.937.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7051bp|location=Sequence derived from alignment at C-linearis_contig105:120368..127418- (Chordaria linearis ClinC8C monoicous)ACCATCAAGCGCGCAGCAGATTGCACGGAGCTCGCCTCACACACGCGCAC
AACGCTTCCTACGAGCCAGACACCAGAGGTTCTTGCTTGGAATAGGGAGG
ACCTGCTGCGGCATTGCGACAGGGAGCCTGTGCCAACGGCGAAAGCTCGA
CCAAATATTTTGGCTGGCTGTCGACCGAGAGAGAGGAGGAGCCGGGGTGT
GGCTGGCTAGTAGCTCTGGCAATCGCGAGACGCAGCGCACACGAAC ATGT
TAGTTCTCTTCGAGACGCCGGCGGGCTACGCATTGTTTAAG GTGTGTTTG
GCCTTCTCTGTTGTGGCTTTTGCTGAAAAGCTTGCATTCGCGACAGCAGC
AACCACTCCCTGCGATCATGTTCGCGTTCGCACGAGCACCACCATACAAG
CAGATGGATAAGGAGGATGGCAGGAGGAACGCATCTTGAGACGACTTTCG
CCTCATTCAAGTAGATGTATGGGGAGGGAACCTCATGCTTGCCAACACGC
TGCTGTGCAAGTTCCTTGCGGCAAGATGGCGCCGGGGAAAGTGCATGCCC
TCACTGCGCAACCATCTTTTCAGTTTCGAGGTTAACACCATTACATGTCG
ACCTCCATCGCCATTACCCACCGCCCCCTTCGACACAAGTGTTGGTGTTG
GGTTCTCCTTGCCCTGCCTCTACAACGAGACGTGGGTGGCATAACTGCCC
CATCCAGCGTGGGGCTTTTGTCTTTCAAACGAGGAGAAGCTAACCCTGAC
CCACCACACCTCATCGGTAGTTACAGTAGCGGTGAAACACATGCCTCCGC
ACGGGCTTACAGATTACCAGGGAACTGAGCGCCGCTCGAGGCAAACATTA
CATAGCGAAAGCGCCACCGCTCTCGAAAAGCTTGTGAATCCTAGTCTCTT
TACTCCGTTTTTTAAAACCTGCTCGCGATCCTCTCTCTTTTCTCGCGGCC
CCTTCTCCTTTTGAAACAAAACCCAAGAAATCAAAGACGGAACCTCCCCA
CATTGGAGACGGGACTTCGTGGGCTTAAAACGGTATTCCAATGGTGTATT
ATGGGTCCGGCCGAGTATAAAAACACTTCAAGTGTGAGAGATTTCACCTT
TTCTTTTTCTATTGTCCCGTCGGTTCCAGATGACAAATGAGTCCATCCTC
AAGGACGCGGACGGCATCTACGACGAGTTCGCGACGCCAGAGAAGGCCGC
GGAGTCGGTCAAGCTGAAG GTGGGCATCGTACCCCATCACGTGTACCCTA
GTGTGGGTGCTCTATTCTCACGCCAATCCGGCGACGGCCGGGGTGAGGGG
GAAGAGGCGAGCACTCAGCAAGGCGAAGTGGGGCAGGGATATCGGGGGGG
GGGGGTCCGTTCGTTCACGTGTGTACTGATAAAGGCTACAACAGGATGGT
TGCAGCCAGTGCCGTCAGCCTGCACGGGGGGGGGGAACCTTTCTCGCCGC
CAGGAAACTAGCTGTAGCACCCTGTTTCCATCACGGTGCCTGCTGGCGAG
GGAAGTGGGAAGAAGTACGGGTGGTGATGCGCTCAAAGTCGCGCGTGGGA
GGAGACGTGAGCACTTTCCATCACACCCCCTCGGCCCCCTTGTCGGCCCT
GCTTTGCCTCGCAACACCGACCGCACGAGTTGTTTATTGTCAGGGCGCCA
GATTTAGCCGTCGTGATTATCGGCCATGCGAGAGCAGGCTCTCGAGGCCC
TTGTCCTAAAATATCTTGGGCGTGGTTGACCTCCGCAGGCGTTCATGACG
TTCGCGGACACCGCGGATGCCGTCGCCGCATCGACGGAGATGATCGACAG
CAAGATGGGCAAGAGTCTCAAGAAGTTCCTCACCAAGAACATCATCAAGA
AGGAGCTCAAGGACAAG GTACGTGCGTGCGTTCCTCTGGCTCTCAGCGCC
GGCCGGCCGTTCTCCCGTAGAACCCGCGGTGGCTTCACCTGCCTGTTCAT
TCATGTGACGGCGAACTCGAGCGATACAACACGATTACGTCGCATGGCCG
CTTCTCGCTTCGCACGTCTCAAGTCCGCGCGTCAAAACGTCGCTGCGGTA
AGCCGGCTTCTAACCATCCCCCCGCCCGCCACTCGATGTGCCACTCTTTG
TTCGTCGACCATGGGACCGATGTTCTGGTTTCCCCCTCGCGAATTTTTCC
AACAGCTAGCCGTCGCGGATTCGAAGCTCGCGAACTCCATCAAGGACAAG
CTGTCGATCAAGTGCATCAACGACTCGGGGGTAATGGAGCTCATGCGCGG
CATCAGGGGGCAGCTGGACGGCCTCCTCACGTCGGTCGGGGACGACAACC
TCCGCGCCATGCGCCTGGGGCTGAGCCACTCGCTGTCTCGGTACAAGCTC
AAGTTCTCGGCGGACAAG GTACGCGACCGTTGGTTTCTTGTCGTTGCTGG
TGTTGCTGCTGCCTGCTGTTGGTAGTGGTGTTGGCGTTATTTTGGTGTTG
AGATTGATGTTTTTTTCGGTGTTGTTGATGTTGCTGCTGCTGTTGTTGTC
TGGAACGGCTGACGTAGTGTCGGCTACTTTTTTGTTGTTGGTGGCTCGGC
GGCCCCGGCGACGTCGATGCTGTTGATTTTTTTTGTGTTTTTTTTTGTAA
ACATCACCCCTGGCAACAGCGCGTGCGGGCGGACCTTCTAACCCTTTCTG
GTGCGTGTGTTTCGCCTGCTGTGTCCCTTCATCGGCGTGGCGGGCGTCGC
GTGTCTGGGGCAACAGGTGGACACGATGATCGTCCAGGCGATCGGCCTCC
TGGACGAGCTGGACAAGGAGATCAATACGTACGCCATGCGAGTCAAGGAG
TGGTTCGGCTGGCACTTCCCGGAAATGGCCAAG GTATTTTGCATCCTACA
TCCATCGGGGGAATTGAGAGATGCACAGATTCGTCGTTGTTTCTAGTTTT
CCAGTACATAGGAAGGAGTGTTCTGATAAAGTTCAAGTTTTCCCCTGTGA
TCAGACAATTTGACCTGTCTCGTGGACGTGTCTTGATGGTCCCTTCCTTG
GCACACAGATCATCAACGACAACATGATGTACGCCAAGGTGGTGGTGAGA
ATGGGGGTGCGGACGGAGTGCAAGAACTGCGACTTCAGCGACATCTTGGA
GGACGAGGAT GTGAGTGCATTTGAGAACGCTACACATGTAGCTTTCGGGA
AGTACAACAATCGTTATATGTCTGTCGGCTGGCTCCTGGATTGTTTTATC
CTGTGGGGGCCCTGTGTTCGTATTATTGTTTCTGGTAGGCATACTAGAGC
CCACCGTGTAAGCACCACATTTACCCCACGCTAAACTACTTCGTACCCCG
CATTTTTCATACCTTGGCCCCTTGCGGAAAACAGATGGTTAAGGACTTGA
AGGAGGCGGCGGAGGTTAGCATGGGCACGGAGATCACTATGATCGACATC
GTCAGCATCAAGGCGTTGGCAGACCAG GTGGGTCAATGGGGGCATGAAGA
GGAGTGAGGGGAAGGGGGCCAGCTTGGCGCCCGCCGGCTACACAATCGCC
CAGTGCTAAATCAAAACTTTGGTTCCTGAACACCCGGATCCATTTTCGAT
CACAAACGCGGACCCATTTTTTATTGCTTTGTATTGGGTGATGGTTAGCG
GGATGCATTTTATTGTTCCGTGCTCCACTCCCCCTCTAATTTAGCGGCCA
ACAAGCCGACGTCGTGCCACGCTGAACATGCCGCCGTCCGTGCCCGTGGC
GCACATTATTTTTGTGGCTTCGTTGCATTCCATCCTTTATCTGGAGAGGA
GCAAGCCTTCACGCATTTTCATCAGGCAGCACACGGGGGGGGGGGTCGCA
CAGTTTCTCAACCCCCGACCTGCCGTTGCGACATTCGTGGCGCTTCGCTG
CAATGCAATGCAATGCAAGCCTTAGGAGGAGATGATAATTTCGTTCCCCC
ACAAGAATCCAACCCACGGCGTGCATTCCTCCCGTGGCCCCGTGAATCGC
AGGTCGTGGCCCTGTCCCAGTATCGCTTGCAGCTGTCCGACTACCTCCGC
AGCCGCATGCAGGCCATCGCGCCGAACCTGACTATTATGGTTGGGGAGCT
CGTGGGCGCGCGGCTCATCGCTCACGCCGGGTCGTTGATCAACCTCGCCA
AGCAGCCTGCCTCGACGGTCCAGATCCTCGGGGCCGAGAAGGCGCTCTTC
CGCGCCCTCAAGACCAAG GTGCGCGTGTGTGCGTGTGTGTGGTGTGTGGT
AGAAGGTAGAATAGTCGCTTTTTGTGTTTACTATAAATACCTTGGGTGTG
TCTGGCTGTAAGTTTGCTCGTTTTTATTTTTCCTCGTGTGCTGCCCCTCT
CGGGTCAGGTTTGGTAAATAAAGTCATCCAGCGAAATGTTGATGGTTTCC
CGTGTGTGGTTCGATGGATGCGTGCGTACATACGCAAGCACGCGTTTTAT
TCACTCGTTGTTTCGAAACCGACGAATACGGATGTAGCCGAGAAGATGAA
CCGTTAGCTCTCTCTTTTTTTTTTTCTTTACATGTAGCAGTTGCGGTGGT
GGTGAGAGGGTTCAGGGGCTTGATGACACCATCTCCGTACAAAGAACGAC
CAACACACGCGCGTAAGACTGTATCGTTCAGCGTGGGGTGCACGGATCCA
CCATGGGAGCTCTGTGTTGACTCTCTCCCCCCCTCCCTGGCATTTTCGTC
TCTGCCACATTCTCTTTTTCTTCGCTCTCAGCACGACACTCCCAAGTACG
GTCTGATCTACCACGCGAGCCTGATCGGGCAGGCCGCGCCCAAGAACAAG
GGAAAGATCTCGCGCGTGCTGGCGGCCAAGTGCTCCCTGGCGATCCGTGT
TGACGCCCTCGCCGACGAGACGGACACGAGCATCGGAATCGAGAGCCGCT
CCAAG GTGTGCCATGATTAGTTTCTGTCTACCTCGTATGACGTTCGCTTC
AAGTACATTTTATATTCTCTAGTGGTCGCTCACAAAACTTGAGCCGAGCC
TTAATGTCGTTGTTAGGGTCCTAGCATCTAAGTCACCAGCCAGGGACAGA
CGCAAACAATATGATGGCACCCTGAAAAAGTTTCAATAGTTGCCGTTAGG
GTGTGTTCCTCTCCTCTCATTAACCGTTGGTGGTCGGTCTGGATCTTTTC
GCTGTCTTCGTGCTTCGTTTTCACGCGGTCAGGTGGAGATGCGGCTTCGA
CAGCTCGAGGGAGGAGCGCGCTTGTTAGAGGCGGCGCCCAAGACTCCCAC
GCAG GTACGTAGTATACATATTTTCGTCTGCTGGGCGGCTTTGGAAAAAA
CGAGTTGTTGCGTGTGATGTCTCTTTGAGGATACTGCTGTGATGGTGGGC
ATTTTGGCACGTGCTTGTCGCGCCACTTAGCCGTATGATGGATGCTCCGC
GGCCACGTTTTACGACGGCGATGCGAGTGTGTGCTGGCCCTTGCCCTGCT
CCTGGTACCACGGGAGGGAGCCTCGCCAAGAACAAGCACTACAACGTGTA
ACAGATGTTTTTATCCTGGTATCATATCTACTTCGAGCACACGCACACGC
TAAACATTTTGTGAGTGTTCATATTCAACAGTCTTAGTCTTGCTATGGCT
CACCGCCCGCCCCTCCTCGGTGATCGACGTCTACGCACGTGGTTTGATCT
TTGCCGCACAACACGGAACACTACATCCACAGATAAAGAAGTACGACTCT
AAGGCGGCGGTGGCGGGGACACCGAAGACCTACAGCGCTGGGGAGGACAT
GGTGGATGTCAAG GTGTGAGCACCGTACATACCGTCCGTGTCTGCGTAGT
GTGTTACATGAGTCAGTTGACTCGCATCCCGTGGCAGGGGTGGGACGGAT
GCGAAAGCATGGACGACGATTCCTTCGTCTCTGTTTCGTCGACTCGGAAA
GGAAGTCGCCCAACACCGTGCAAAAAACGACAAAAATCGGAGGGTGTGCA
GGTCCATGATCATTCTTGAGATGCATCTGTTGCCCTACATGTAGCGTTGA
AATCTGTTACGTGACATGCCATTGCCGTGTCGTGTCGCGCAAAACACAAC
AGGAGGAAGGCTCCGAGAAGAAGAAGAAGAAGAAGAAAGATAAGAGTGCC
AAGAAGGACAAGAAGGACAAGGCCGCCAACGGGGGAGGCGCGAGCGAGGA
CACCAATGGGCACGCGGCGGCGCCTGCGGCGGAGGCGGTCAAGGAGGAGG
GAGACTCAGAAACCCCCAAGAAAAAGAAGAAAAAGCGGAAATCCGTTGGT
GAAGGCGGGGATGTGGAGAACGGGGAGGCGGCGGCGGCAGCAGCGTCCTC
GAAAAAGAAGAAGAAGCGGAAATCGGTCGGGGGTGACGTGGGGGACGTTG
CGGCGGAGGGGGGCGATGAATCG GTGAGTTGTCTTGCTCTTGCACCCCGA
AACAAAGTCTTGGCGTCATCGTCATGCGCAGTAGTTCACCGCTGGCACCG
ACGAAAAGTTATAAATTTTAAATTTTAAGATATGGTACGCAAGAGCAGGC
CTGGACGCTGCTGTGGCGGAAGATAGACAGCCGCAGCAGCGAAATGTATT
ACGCTGCACGTGAGCCGACCTAGCGGTGGGCCTCTGGCCAGGGTGCTGTG
GTTTCATCGATACTTGACACCACCCCGCAGTGATTGTGATGGCCCAAGTC
ATTGGGTTCTAGTTTTGCGTTCGTTCAAAAGGAGACCCAACATTCTTGCT
TTTGCCCGCGCACTTGCGTTCCTTCAATCGTCGACCTATTGGTATCAATC
TTTTGAGTTTTCTTCACCCGCGCAGCTTTGGATCGATTGTTGTACCGCCT
CTGCTCCGATCAGTTGGACGCAACGAGTCCTGTCGCTGTTGTTTGATGGC
GGTGGTGGCGGTGGCTTGCCCCTCTGAACTCTGAACGCACGCACTATCGT
TTGCCTTCCCCTCATTCTATCCCCGCCCCTCCACCGTTGTGTTCTGTTTC
TGCCGTGCATGCAATGTTGCGACTGCTATTGTTTTATTACCTTGATCCAA
TCGCAGGAGAAGAAGCGGAAGAAGAAGAAGAAGAAAGACCAGGAGGCATA
A AAATTCTAGTACAAATGTAAAATGCTCCTAAGTAATGAGACGTGAACGG
G back to top Coding sequence (CDS) from alignment at C-linearis_contig105:120368..127418-
>mRNA_C-linearis_contig105.937.1 ID=mRNA_C-linearis_contig105.937.1|Name=mRNA_C-linearis_contig105.937.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3396bp|location=Sequence derived from alignment at C-linearis_contig105:120368..127418- (Chordaria linearis ClinC8C monoicous) back to top