Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-24_001290.1 |
| Exons | 3 |
| Model size | 2477 |
| Cds size | 966 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927391.9724176-UTR-C-linearis_contig105:19646..20048 | 1622927391.9724176-UTR-C-linearis_contig105:19646..20048 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 19647..20048 + |
| 1690879672.9073622-UTR-C-linearis_contig105:19646..20048 | 1690879672.9073622-UTR-C-linearis_contig105:19646..20048 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 19647..20048 + |
| 1622927391.9894388-UTR-C-linearis_contig105:21828..21848 | 1622927391.9894388-UTR-C-linearis_contig105:21828..21848 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 21829..21848 + |
| 1690879672.9175699-UTR-C-linearis_contig105:21828..21848 | 1690879672.9175699-UTR-C-linearis_contig105:21828..21848 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 21829..21848 + |
| 1622927392.0332284-UTR-C-linearis_contig105:23280..24369 | 1622927392.0332284-UTR-C-linearis_contig105:23280..24369 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 23281..24369 + |
| 1690879672.9504092-UTR-C-linearis_contig105:23280..24369 | 1690879672.9504092-UTR-C-linearis_contig105:23280..24369 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig105 23281..24369 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927392.0084436-CDS-C-linearis_contig105:21848..22616 | 1622927392.0084436-CDS-C-linearis_contig105:21848..22616 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig105 21849..22616 + |
| 1690879672.9332943-CDS-C-linearis_contig105:21848..22616 | 1690879672.9332943-CDS-C-linearis_contig105:21848..22616 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig105 21849..22616 + |
| 1622927392.01916-CDS-C-linearis_contig105:23082..23280 | 1622927392.01916-CDS-C-linearis_contig105:23082..23280 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig105 23083..23280 + |
| 1690879672.9416823-CDS-C-linearis_contig105:23082..23280 | 1690879672.9416823-CDS-C-linearis_contig105:23082..23280 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig105 23083..23280 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig105.925.1 >prot_C-linearis_contig105.925.1 ID=prot_C-linearis_contig105.925.1|Name=mRNA_C-linearis_contig105.925.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=322bp
MLSEKDGVLSSDKPPHFAEYGVVVADSTDTTNDDDSTTTTSKKDDTSSSN
NNNRANNNGGGGGGGHKMPHGGSGNPSSPAPSANPGALGGESQSRFSKSW
SKARMPGCPLDPTVHPSPSLKVGDVLRGKLLSENGQSSISASRDDGSILL
TRVTGEPPLDLKGKQTGPIPTTVTTLIRSDLGKVNRVYQLRADLDEEEEE
VKKLMRDGQPPKKGVKKAVLGIFPWGEAGWLYRREMAHTKAHRGEVEVII
TKRGVVESFMDGKKVLCEGGPSFCGSRRKDPSNEMRPTSNGVEVTRRLAR
SWSLRMRGQEKLEIWSGRLPA* back to topmRNA from alignment at C-linearis_contig105:19647..24369+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig105.925.1 ID=mRNA_C-linearis_contig105.925.1|Name=mRNA_C-linearis_contig105.925.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4723bp|location=Sequence derived from alignment at C-linearis_contig105:19647..24369+ (Chordaria linearis ClinC8C monoicous)
GCAACAGGAGTTTGTTTGAGGTGTGCAGGGTATATAGTATCATCATATAC
TTCGTATATATATGCACATCATTGCATACAATCTTATTTCTTCTTTTTGC
CTCGAGAAACGCACAGAAGAACGACAAGAAGAGCTCGGGGACACAACCGA
AAGTACGGGCCATCCTACACACGCGCACACAACAAAAAGATGAAACCCCG
GGGATGGCCCACTTTCGTCCCCTTGCGGAAGCGGTAATTACCGGTAGGTA
ACGTGGAAAATCCGGGTAAATAACTCCCATCCTTTCAAAAAACTATGCAC
CCCACTTTCTTCTACCGCAGAGTTTGGATCGCTACTACAGCAGAAAAGCT
GGTTTCGACAGCAGTGATTGTCTCGAAAAACTTCTCGACGTGCAGCGCGT
GGGTGAGTTGGATGTGCATCGCGAGGCCAGTGTGGGACCAGCCTAAGCGC
CTCGCTTCTCTCTATCTCTCGCTCGCAACCTATCTGATGTTGTCGACGGA
AGAACCGCGTCAGTCACAACTTGTTTGAATATTATATATGTCGGCACGTA
CGCGTCCAGTTCCTTTGGTGATGCTTGAAAGAAGAGGTGAACGAATACGA
AAGGCTCAAAGACACTACGTGCTACGTACGTGCGTGACGAGCGGTATCAC
GATGTGTTCACCCCGTAGCAGCTTGGTGTACCGAATACTTGCGCATGTGA
TGGCTCAAGGCAGCCGTATATCGTATATCATCGTAAACGTTTCCGGCTTG
TTGAGTTTTTGGCTTTTTCCGGGGTTGGTCGCGGGGGTGAACGAAATGTT
AATGTTCCGAAAGTTAAAGATAGATCTCAGATCTCAGATCGATACGTGGG
GGCCGAGCCTGGCTGCAAGATGTTCACGTCCCTGCCTCATGGCGTGCTAA
ATATGCCTGGTCTTCAACCACCGGCTAGCGATGTCTGGTCTTCAACCACC
GGCTAGCGAAGTCTTGTTCTAGCTGGCGTTGTTGATACGGCTGTTGTTGA
TTCGTTGCCTTCATCATCGGAGTCTGTCCGCACGTACGTATCGGAGTCGT
TCGCACTCAGGGTGTGCGGGAAAAATAGGGTTCCAAAAGGGCATGTACGT
AGTACGCGGTTCAACTTTTGCACCTCGGTGTAGGGAGACTCCGATACCTT
CGATGAGGTTGGGCGATATCACGAGTGGTACGGTATCCAATACTTCGTAC
TACTTCTACTGCTGTGGAGTCCTTCTATGCTTTGGCACCGTGAGGGTGCT
CATCATGTGCAAGTAAGTGAAGTCGCTACAGAACGCGCGATCTACACTAC
TAGCACTCCGGAATAGTAATGTAAGGAACTCTTCGTTTGCGCGAGGCTCG
TTTCTTCTTTTTCTGTGGGGCAGCCAACTTGTCTTATATACGGGTAGGTT
TTAGCTAGAGGTTCTTGTCTGTGCATCTCAAGTCGTGAAGTGCAAGTTCT
TATATTTTGTTTTTTTTCAGCCTCAATTTCTCAAGTGCCAGTTTCTAAAG
CGGCGGCGTCTTGGCGCGGGGTTTGCGTTCAAAGCACCCCGCTCCGCCCA
AGCCGCTTTTGTTTTATTCAGAACCGCAAGTATCGGAGTCATTACACAAG
GAAGGGTGTGCGTTATGCTGTTTAGACCGAGTTAATTTTAGTTCACTTTC
AGCACAGGTATCGGAGTCTCTCCGCACAACATGTCGAAGTCTTAGTCTTC
ACACCCTGTCTGTGCGATAAAAACCTGAATAGAAGCACGAAAACAATTAA
AAAAGACGACCGCACAGCAGCAGTGAAGCAGCAGTGAAGTGAACACAGAG
GTGAAGTGAAGACTCCGGTGATTGCGGTAATCGAGATTGCTCCATCCCAA
AATCATTAGCATGAATCACGGCCCGTGGTGGCATAGACTAAGTGCTAGAG
CCACCAGAAGATCTAAAAGACACACACAGCAGGGCATAGGTACACACGAC
GACCGGAGTGGTACGCCTACAACCACAGGACTCCCTAAAACGAGTTTGTA
TGTGTCCAAACGTGTACGTACAAGGAACGCAAAGCAGCAGCCTTGACAAC
ACAACGACACCACCCCCACCATCACCCACCCAACTTAAGCTGACCCCTAC
AGTATGTGCTTTGTGCTGTGTGCCGCTGCCACCGCTGCTGTGCTACTGTA
CCGCCGCCGAATAAACTACCTTGCGGCAACAGGTGGACGAGCACGGTGTG
GCATGCTGTCGGAGAAAGATGGCGTGCTTTCCTCGGACAAGCCGCCGCAC
TTCGCGGAGTATGGGGTGGTGGTCGCAGACTCCACCGACACCACTAACGA
TGACGACAGCACCACCACCACTAGCAAGAAGGACGACACCAGCAGCAGCA
ACAACAACAACCGCGCCAACAACAACGGAGGCGGCGGGGGCGGCGGCCAC
AAAATGCCTCACGGCGGCAGCGGGAATCCATCCTCCCCAGCTCCGAGCGC
AAACCCGGGGGCTTTAGGAGGAGAGAGTCAGTCCCGCTTCTCTAAATCGT
GGTCCAAGGCCAGGATGCCGGGCTGCCCCCTTGACCCTACGGTTCACCCA
TCCCCGTCTCTCAAGGTCGGGGACGTGCTGCGCGGGAAGCTGCTCAGCGA
GAACGGGCAATCGAGCATAAGCGCGAGCCGCGATGACGGGTCTATTCTCT
TGACCCGGGTGACTGGAGAGCCGCCCCTCGACCTTAAAGGCAAGCAGACT
GGTCCCATCCCCACAACTGTGACGACCTTGATCAGGTCCGACCTCGGCAA
GGTTAACAGGGTTTACCAGCTGCGCGCGGACCTCGACGAGGAGGAGGAGG
AGGTCAAGAAGCTGATGAGGGACGGCCAGCCTCCCAAGAAGGGGGTGAAG
AAGGCCGTTCTGGGCATTTTCCCGTGGGGCGAGGCCGGGTGGCTGTACCG
CCGGGAGATGGCACACACCAAGGCTCACAGAGGGGAAGTGGAAGTGATTA
TCACCAAGCGGGGTGTGGTGGTGAGTGCGGCTGCCGCCGGCAAAGAGTCC
GGCAAAGAGTCGTGGGGGTGGTATCATACTCAACAGGCTCTAGATACCCG
TTCGTAGGCACGGTACATTATACCTCGCCGTTCGATATTGCGCCCCGTTC
CCATGCTGGTGGTTGGTTTCCCCCTCCAACAAGCCCTAAGGTGAAAGCCC
TAAGGTGAAAGCCCTAAGGTGAGGTTGGGCGGAGCACTAAATTTTGCGAA
GCGCTACAGAGGTGGGCAATCGTGCCGCGTTGACGATCAAAGTGGCTTCT
TCTCTCTTACAGTTCCCAGAAATGGGGGACAATGTATGTAACGTTCCGAA
ATGCTCAGGTTGGTGGGGCACACAAGGTGCTAACATTGTTAGCACTCAAC
CACCCGCACCGTGACGTAAACGATTCACAGCAAAACCGCGCCCCCTCCCT
CACCGCTGCGATGCACCAAAAAACAAACCTAAAAAGGAGTCCTTCATGGA
TGGGAAGAAGGTTCTGTGCGAGGGCGGCCCATCGTTCTGCGGCTCTCGGA
GAAAAGATCCGTCCAATGAGATGCGGCCAACCAGCAACGGCGTAGAGGTG
ACCCGGCGATTGGCACGCAGCTGGAGCCTGCGCATGAGAGGGCAGGAGAA
GCTCGAAATCTGGTCTGGGAGGCTTCCAGCTTAGGTGGCGCCCCATGTGT
TTCGCCGGACTCGGACTCAATAAGTCAACACCCCCAGTCGATATTCCTAC
CGATTGTATGATACTTGCTATTTTCTTTTTTTAGATGCTGCTGCACGATC
TTCCGATGTGCGGGGTTGCTGCTACGGCAGTCTCCGCACTTTCGTTTTGA
TGTATTGGGGGGCCAACTTTTCTTGTCTTGTCCTTTCTACTAGCACGTGA
GTTGCGATACCGTGCATCGTCGTGCATCTGCATTCTGCTGTTATTGTGCA
CGGTGTCGCAGCGCTTTTTGGTATTGACAGTAGTGGAAATTGGCCGTGTC
TGTTGGATCAGTACGGACAAAGGGGGTACTGGGTGGAGAGATCGGGATGT
TTTTTTTATGTGAAGACAACAACAACAACAAGTAGTAGTCTAGCGCTATA
CGCTATATGGTTTTTGTTTGATTTTATCGCTCTGCTGACCCTTCGAGTGC
TATACGGTATGGTTTTTGTTTGATTTTATCGCTCTGCTGACCCTTCGGGT
CCATAGTCTATCTTTCAGGTGAAGTTAACCTTTGTTTTTGTTTGTTTCTC
ACGTTAGCTCTCTATTCCAAAACATCCATGGGAGCCCGTGGTCACAAAAC
TGGGCACACTCGACGTCCCAAAGAAACTCAGCAAAAATATGGTACATACG
CGCCCTGCGATACTAAACTGGGCCCCGAGGGGTTTCGCGTCTAGCTGGCG
CTTAAACACCCAACTTGTGACCACGGGAATTGACCGTGTCAGTTGGATCA
GTACGGACTAAGGGGGTCGGGGGTCGGTTTTGAATGTGAAGACAACAACA
ACAACAACAACAACAACAGTAGTAGTGGCTGTGGAGGGTGTGCTTCGCAA
GACAGAGTACTGCCATCGAGTACATGATGGTCGCAACTACGCTATGTTTG
CATGTCTGTCATTTTGGGTGTGTAACAGTAGTGTATGAAGCAGCTGCATA
CGTAGGTAGTATAAGCATTGTGGGTTAGCGAGGGTGTACAGGTACATTGT
AGAACAGAGAAAAAAAAATTCGAGGGTGAAGCGGCGAAACGGTGAAACGG
ACGGGCAAACATGCGGTGGAATC back to topCoding sequence (CDS) from alignment at C-linearis_contig105:19647..24369+ >mRNA_C-linearis_contig105.925.1 ID=mRNA_C-linearis_contig105.925.1|Name=mRNA_C-linearis_contig105.925.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at C-linearis_contig105:19647..24369+ (Chordaria linearis ClinC8C monoicous)
ATGCTGTCGGAGAAAGATGGCGTGCTTTCCTCGGACAAGCCGCCGCACTT
CGCGGAGTATGGGGTGGTGGTCGCAGACTCCACCGACACCACTAACGATG
ACGACAGCACCACCACCACTAGCAAGAAGGACGACACCAGCAGCAGCAAC
AACAACAACCGCGCCAACAACAACGGAGGCGGCGGGGGCGGCGGCCACAA
AATGCCTCACGGCGGCAGCGGGAATCCATCCTCCCCAGCTCCGAGCGCAA
ACCCGGGGGCTTTAGGAGGAGAGAGTCAGTCCCGCTTCTCTAAATCGTGG
TCCAAGGCCAGGATGCCGGGCTGCCCCCTTGACCCTACGGTTCACCCATC
CCCGTCTCTCAAGGTCGGGGACGTGCTGCGCGGGAAGCTGCTCAGCGAGA
ACGGGCAATCGAGCATAAGCGCGAGCCGCGATGACGGGTCTATTCTCTTG
ACCCGGGTGACTGGAGAGCCGCCCCTCGACCTTAAAGGCAAGCAGACTGG
TCCCATCCCCACAACTGTGACGACCTTGATCAGGTCCGACCTCGGCAAGG
TTAACAGGGTTTACCAGCTGCGCGCGGACCTCGACGAGGAGGAGGAGGAG
GTCAAGAAGCTGATGAGGGACGGCCAGCCTCCCAAGAAGGGGGTGAAGAA
GGCCGTTCTGGGCATTTTCCCGTGGGGCGAGGCCGGGTGGCTGTACCGCC
GGGAGATGGCACACACCAAGGCTCACAGAGGGGAAGTGGAAGTGATTATC
ACCAAGCGGGGTGTGGTGATGCTGTCGGAGAAAGATGGCGTGCTTTCCTC
GGACAAGCCGCCGCACTTCGCGGAGTATGGGGTGGTGGTCGCAGACTCCA
CCGACACCACTAACGATGACGACAGCACCACCACCACTAGCAAGAAGGAC
GACACCAGCAGCAGCAACAACAACAACCGCGCCAACAACAACGGAGGCGG
CGGGGGCGGCGGCCACAAAATGCCTCACGGCGGCAGCGGGAATCCATCCT
CCCCAGCTCCGAGCGCAAACCCGGGGGCTTTAGGAGGAGAGAGTCAGTCC
CGCTTCTCTAAATCGTGGTCCAAGGCCAGGATGCCGGGCTGCCCCCTTGA
CCCTACGGTTCACCCATCCCCGTCTCTCAAGGTCGGGGACGTGCTGCGCG
GGAAGCTGCTCAGCGAGAACGGGCAATCGAGCATAAGCGCGAGCCGCGAT
GACGGGTCTATTCTCTTGACCCGGGTGACTGGAGAGCCGCCCCTCGACCT
TAAAGGCAAGCAGACTGGTCCCATCCCCACAACTGTGACGACCTTGATCA
GGTCCGACCTCGGCAAGGTTAACAGGGTTTACCAGCTGCGCGCGGACCTC
GACGAGGAGGAGGAGGAGGTCAAGAAGCTGATGAGGGACGGCCAGCCTCC
CAAGAAGGGGGTGAAGAAGGCCGTTCTGGGCATTTTCCCGTGGGGCGAGG
CCGGGTGGCTGTACCGCCGGGAGATGGCACACACCAAGGCTCACAGAGGG
GAAGTGGAAGTGATTATCACCAAGCGGGGTGTGGTGGAGTCCTTCATGGA
TGGGAAGAAGGTTCTGTGCGAGGGCGGCCCATCGTTCTGCGGCTCTCGGA
GAAAAGATCCGTCCAATGAGATGCGGCCAACCAGCAACGGCGTAGAGGTG
ACCCGGCGATTGGCACGCAGCTGGAGCCTGCGCATGAGAGGGCAGGAGAA
GCTCGAAATCTGGTCTGGGAGGCTTCCAGCTTAGGAGTCCTTCATGGATG
GGAAGAAGGTTCTGTGCGAGGGCGGCCCATCGTTCTGCGGCTCTCGGAGA
AAAGATCCGTCCAATGAGATGCGGCCAACCAGCAACGGCGTAGAGGTGAC
CCGGCGATTGGCACGCAGCTGGAGCCTGCGCATGAGAGGGCAGGAGAAGC
TCGAAATCTGGTCTGGGAGGCTTCCAGCTTAG back to top
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