mRNA_C-linearis_contig104.923.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: D8LE96_ECTSI (Ubiquitin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE96_ECTSI) HSP 1 Score: 4229 bits (10968), Expect = 0.000e+0 Identity = 2673/4324 (61.82%), Postives = 2945/4324 (68.11%), Query Frame = 1 Query: 40 MDHCAGGVT-QDASDHARSLVAFEEILEFLVVRLSQASDALALPGEDGELTSALRELSALMKGLAEEPAMESPAHRRALLRTSLPASLKAILGQTYAGEADTVTSSVQEALESVARALAKVLPVTDGVELEGACESLLLLLDRRQVFYRHTGNPGXXXXXXXXXADLLSVLSEEDWRRGVGFADWVDAVSFESTADVRRWRRAQIVEESSTGRLRLSFETLSDYHDEWVSRDSANIAPPGTRSGHGVEGWRQSLQPGSLVDAMDPNNNWTNATVVDTTERLGAPVVFSVGPMGGSSDDKGLDLLISFRVYDPDGDQEEAV-PERQRHGELALAGEAGGEGDGRGAAGSGLPCASPPARREELEAMXXXXXXXXXXXXXXXXXXXXXXXXXXVAPHDHSLLAAGVGDGAAAAVVAGERGFPEQQPDVEGGIDGVADNAAVAGRGRDAAGVGAVAAPAADGWGLAAGDGGGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRYFGLLSRDEWIPASSSRIEKLNSRAPWKNSWTEEAPVNDRDDPYLTEDGSRLVFAVPRVPVDGAPCLVSNINAFGQEGGFENLVVRLSPPPAREETLPAPLAEAPLXXXXXXXLPTASVAAAVDDAESPGVPAVASPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNKPRPLAAAVPLEAVRKALAAVASVRPLLARRVARAILDRTATAVSAALKEAPAAELRGLTRERLEAIVNGFREVLKRGHRSSEAFRRVERLQLDLALKLYSCPFMERKLQGLKVLADAVTASETAVPSLANSGSQGNSPALTPQELVEWLDDNNFVKALFAGHTQLIRRSGDVLSFLCRERALSEQHLDIIWTAGAGGQDKDRRICVHEVLRPLLYQLDMSLLERLVDKLRVQPADEVIEDTVAFIRDMAEATQQGDAAPAVRLLDLLWVMANDRSPYRPRIKASAAESILPVTGLRGLKGHRGQTLERCVNNVKEGRSVVTSLKVLEAVLQNYPKEATPYDVLSRRDVIHSLEAESKLTGLLLRELEIYVASSRTPSPAGLPSGRTTAANDSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHGGASSSTDEAHLAQVKARLHTLEQVYDNSHLVLSTEQVKRLWACLGPGPVASXXXXXXXXXXXXXXXXXXXXXXXXXTAGEVSTLLSWLSKACEACEAEGGGGMFEPGVAAELFKELIVSDGEKREFAASSASPEWFSCFQTFFFKVNRQAGRMYGASA-----------SGKGSTGASSLGERG--DVEGMVPATGDRDGDREARRDAPVPPRDLDAPLDVVVFPSDLSGMGALWNVALEAEDGVVVDQATRLLNRTHQELAQEMRDRVGEIREEYINTCMAYVKVSEED--DHSDETGDG------------NXXXXXXXXXXXXXXXXXXXXXXXXXXQRSVVRALHLLEEFVDETEMAGTVTLRGHAARVRGAKVVLNFDNKVPEPKRMASSFKLEMHSNSQVWEVRRSVALKAKMAVKDVELKLVRGAGRSGSSDGGEFSAGSRAGDYGSGSELRSVEALDRSNSRRLGDLGLRRDDVWLVTRRSGPPVRRAPLLDSSGKLLPKARAIFDQWFYQFRNADGVMDRVGAARFIDSCCHDNCKPTDERVSKFFRNYDRTGQGRMTLDDFLRLFRDSCKDRPGVVWSNLKAHHYRDDLTKAPDAHGVVPGTNA---AAAXXXXXXXXXXXXXXXXXXXXLPRTIISRDALSIRSLLGVVSLGGPAAAAAWRFLMCLPTNPKMLEEVRLLKGFRDGERGDVVDGLELGVESSGGGGSGRGKWRALLGPPGSPRMLYTLQIVDGVLDFVTGGGGEG----GGTRAVGAAAGGEGGRE----WEGMDCEQWMVDFVRSGGFSQFCEALLTRGVFGDGHPDKMVDAQQACLTLILKVVRVFLLGVLSAPAV---MNRPTPTA--PPASLDDAXXXXXXXXXXXXXXXXXXXXXXXXXGEPSLGD--------GADGXXXXXXXXXXGMGDDAGGLDVPCDSSTETAETETRLSPEEAVVGGGVPSALGGGDXXXXXXXXXXXXXXXXXXDALAIPSGPSLSESGKLWACLPMDVTAAVLGAVELPDLQARLMELAGVAAHIADAGSRVV-----------------------APLKLFGCVGEGAPSDAMAEEALRLWVGVSRTPPPESWGPRLLFSGEH---GGAGGVPXXXXXXXXXXXAEMDGPVLKAMFCASDAIRAQLARSLLSVCGGESTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDHGAVDAEGGARLPGTTSXXXXXXXXXXXXSSVAGAAAPGEEEGT-AGLGA--------------------EAGRK---GLRDHVVRLLLDNIPRSVKKSGDGGGAVGVPASGGKEEEEHGREAHRRKGK-DCTQLFEVLCALVDKSIKFGVDDHERATGEAGDQVAPAAGPKRGRLDVDGLAADVVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEACPGAGLPLREGLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPR---------------AAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGETDTDPGSLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLMSTFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRDPNLDASRPRPPSADTADSDGDDKSMAAGFSSXXXXXXXXXXXXXXXXXXXXGAV-----ETSPPATTARDEGASPSLRTPGESSGEAVRAGGLDGQG-QAPGSNKWCEFNDTMVKEWEVEGRTRGGEAGESVGGVGGGSSRLGGLEMDCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQSCGAEDRPGPDSPAGGRDAEGGFGR----HRGTTAAEPGRTTAVYAAGLDGGGASGEVAAVGAAXXXXXAAAIPPRVFRAVWDDNNKFLLDRQLYHADMSNFVLEIFKSVRQLASAAAAAN---KSGAVGCLTGTPAAGTPPXXXXXXXXXXXXXXXXXXXXXXGGASTPAMTAAAGAFLPKLARVELGGHGPLVEGFLEWGVRYLLDNLARALENDAFAPLVEQLQGLYDLRPDSAGAFLDAETEAGMQGMREMLLLCPDRPVRVAMRGFYLHLLCILAEEEGDRYLDYDEP---LQQPQASVVAXXXXXXXXXXXXXXXXXXX---------TAPALEEGAGSSASRRAGERDQGXXXXXXXXXXXXXKRGRPSTRLGRVVAGWVSLLPDAARSWGRFEQFLELIEGVGNMGDRERDLLLNRRMVCRLSSFFLQARGGLRLSLLEKSPLFDANPQKRLPRMGHKTAPPRFSPLVRCLRSLRAHSGETSRWQP-GSAMEESDTDTASDSEGSRSDHSASSMRAVKSMPAGPATASFP--GTSSANSAGDPL--SLTAS--PVDLEAREAAAASSWSGDAATSDGGRVGGPGAGVG-AGTGGQRRMTSKQRSRSVVLSVGCRRCMNCETLYDLAFEEQHAPEAAAELMCSWAADSSKVLRPLSRMIVLGVDSTPFTDVDSWLLALRAWLEVDDTLQAERYQLVLGTGKQEPEPKLLVLMMVQKDKYEKWLFRVLMVLTELMAENPGIGAYVSKLRSHEMVPWADWITKHLIDTY----GTLRGVGPTRVKEMDLLQIKENLSVYEKAYLGQTAEERLLDMARRSSIGPAEGEPGVTRVESSTSNGVQVEMLDISDIATM-LGAGGGGGV-VSGGPALKRFWRVTNHRMDSVNFTFKIDPTL----TMYSTRRPNFHLPMGREVKRRLEPRQTVGITEVDKIDLTREFQPHPFKWVFEA---------GTTPPPPXXXXXXXXXXXX----PTA----ALTPSDLLEQQAQMDGDLGEAARIALALEREEAAELEAAAIAAARKADEDDRLTEELAATAASLPVIPYEVVSKVKADG--AAGERKVGGA-LWEAGRRSG 12465
M+H GVT +DAS+HARSLVAFEE+LEFLV+RLSQASDALALPGE+GELTSALRELSALM GLAE+ AMESPAHRRALLRTSLPASL+A+LGQTYAGE++ V +SVQEAL SVARALAKVLPVTDG ELEGACESL+LLLDRRQ FYRHTG PG ADL+SVLSEEDWRRGVGFADWVDAVS ESTADVRRWRRAQIVEESSTGRLRLSF+ LS+YHD+WV RDS NIAPPGTRSG VE WRQ+LQ GSLVDA+DPNN WTNATV+DT ER+GAPVV VGPMGG S DKGLDLL+SFRVY PDGD+EEA+ PER LAGE G + G G ASP AR XXXXX GD V+A G EGG GVA+ A V VAAPAA GWGLA XXXXXXXXXXXXXX GRRYFGL SRDEWI ASS+RIEKLNSRAPWKNSWTEEAPVND++DPYLTEDGS LVFAVPR PVDGAPCLV+ +NAFG+ GGFENL+VRLSPP A EETLPAPLAEAPL P P+ +PP XXXXXXXXXXX G K A AVPLEA+R AL AVASVRPLLARRVARA+L RTATAVSAALK A +ELRGL+RERL+ IVNGFREVLKRGHRSSEA+RRVE LQLDLALKLYSCPFMERKLQGLKVLADAV A+ET + S S SQG+SPALTPQELVEWLDDNNFVKALFAGHTQLIRRSGDV+ FLCRERAL+ H+DIIW AG GGQDKDRRICVHEVLRP LYQLDM+LLERLVDKLRVQP DEVIEDTV FIR+ AEATQQG AAPA+RLLDLLW MA+DRSPYRPRIKA+AAESILPV GLRGL+GHR QTL+RCV NV+EGR+VVTSLKVLEAVLQNYPK+AT Y+VLSRRDVIH+LEAES LT LLLRELE YVA SR+ + S + AA+ S++ R GG S ++AHLAQVKARLHTLE V+DNS LVLSTEQ+KRLWACLGPGP T GEVSTLLSW SKACEACE EGGGGMFEPGVAAELF+ELIVSDGEKR+FAA+SASPEWFSCFQTFFFKVNRQ+GRM+ +A + ST + G G D EGMV ATGD D R+ PPRD D+PLD+VV PS+LSGM ALWNVALEAED VVDQATRLLNRTHQELA +RDRVGEIREEYINTCMAYVK +D D +D D XXXXXXXXXXXXXXXXXXXXXXXX QRSVVRALHLLEEFVDETEM GTV +RGH ARVRGAKVVLNF+NKVPEP RMASSFK+EMH+NSQVWEVRR VA + KM V+DVELK++ G E +GSR G Y G+E RSVEALDRSNSRRLGDLGLR+ DVW+V+RR+GP + R+PLLD+SG+L+PKARAIF+QWF++F NA GVMDRVGAARFIDSCCHD CKPTDERV+KFFRNYD+TG G M LDDFLRLFRDSCKD P VVWSNL+AHHYRDDLT+ T+ A LPRTIISRD S++SLLGV+SLGG AAAAAWRFLM LPTNP+MLE +R L+GFR G K +ALLGPPGS MLYTLQIVDGVLDF+ G GG G GG + A G E RE WEG+D E W+V FVRSGGFSQFCEA+LTRG+FGDG P+KMVDAQQACL L+LKVVRV LLGVLS ++ P TA P LDD+ PSL + G D + A G DVP T AE + + SP G S+ GG + A P S + LWACLP DVTAAVLGA+E P+LQ RLMELAGVAA IADA SR APL LFG VGEGAP+DAMA+EALRLWVGVSR P G L S E G G A MDGP+LKA+FCASDAIR QLA+SLLSVCGG G V + GG + T+ +G ++G LGA AG + GLR+HVVRLLL N+PR+ +G GA G R G+ DCTQLF+VLC+LV++SIK T EA + RL VD L ADVVERLLAHPCTERRGAREAD+DTLLVGLLKL VTIVEACP A L + EGLVEALLDDFLFAPP ASTASES+APTRPKCKT ASRAMAY+LLAALCRPR A G GAFD S NLRLLLEKGL PLR LL KPDVWGYSPS GERSTV RVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGE DT+PGSLVGE+QKLFG L +SEKQAVDPLPFLR VKDLDGN IDVSVQQDAQGFLLDLFDKMEAGLK TPQ+SLMSTFEGRQITQLICPKP XXXXXXXXXXXXXXXXXXXX VEEGFD RERGEAFMCVSLEVKNMVGVEDALEKFTEKE+IEGYAWD+ERRDVSI+KRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFP +LDLEPFTKEGLAWRER+EAAGGRGPEDAKRLGLPGPYE+HPRSYYTY+LRGVVVHTGTANQGHYFSYIRDP + +T + S XXXXXXX V E+ PAT A + G G S EA AGG+ G G +WCEFNDTMVKEW V GR G E GE GGG R+GGL DCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQS GA G D+ + + EGG G + G A P G+ G V + AAA+PP VFR VWDDNNKFLLDRQLYH DMSNFVL+I K+VRQLASA+ A + GCL TPA A+ A +P L+ G LVEGFLEWGVRYLLDNLARAL+NDAFAPLVE+LQGLYDLRP++AGAFLDAETE GMQGMREMLLLCPDR VRVAMRGFYLHLL ILA EGDRYLDYD+P QQ S++A XXXX TA ALEEG ++ AG++ Q +RGR STRLGRVVAGWVSLLPDAARSWGRFEQFLE+IEGVGNMGDRERDLLLNR+MVCRL SFFLQ EKSP++D P KRLPRMGHKTAPPRFSPLVRCLRSLRAHSGETSRWQP GS ESDTDT SDSEGSRSD S MRAVKSMP GP A+FP G + N G PL SLT S P+D E E + S S AA GG VG AG G R MT+K+RSRSV LS GCRRC+NCETLYDLAFEE HAPEAAAELMC+WAAD+SK+LRPLSR+IV GVDSTPF DVDSWLLALRAWLEVDDTL+ ERYQ+VLGTGKQE EPKLL+LMM+Q++KY+KWLFRVLMV++ELMAEN GIGA+VSKLRSHEM+PWADW+TKHL+DTY L GVGP RVKEMDL+QIKENLS YEKAY G TAEERL+DM RR+ IGPAEGEPGVTRVESSTSNGVQVEMLD +D A M LGAGGGG + ++GG LKRFWRVTNHRMDSV FTFKI+PT T+Y +RRPN+H+P GR+V L+PR+T GI EVDK+DLTREFQPHPF WVFEA G P XXXXXXXXXXXX PT ALT SDLLE+QAQ++GDLGEAAR+AL LE+EEAAE +AAAI A++A+E + L++ +AATA+SLPVIPYEVVSKVKADG ++ E KVG A +AGRR+G
Sbjct: 1 MEH---GVTIEDASNHARSLVAFEEMLEFLVIRLSQASDALALPGEEGELTSALRELSALMNGLAEDVAMESPAHRRALLRTSLPASLRAMLGQTYAGESEGVVASVQEALRSVARALAKVLPVTDGAELEGACESLVLLLDRRQAFYRHTGVPGGAAVAGVEGADLMSVLSEEDWRRGVGFADWVDAVSSESTADVRRWRRAQIVEESSTGRLRLSFDGLSEYHDQWVGRDSPNIAPPGTRSGQEVERWRQALQRGSLVDALDPNNTWTNATVMDTRERMGAPVVVGVGPMGGDSADKGLDLLVSFRVYHPDGDKEEALLPERH----ALLAGETG-QDPGNAV---GTLDASPAARXXXXXXXXXXXXTGGLR-----------------------------GDAPGGGVLADPLG-------AEGG--GVAE-----------AVVDGVAAPAAGGWGLA-------------------XXXXXXXXXXXXXXGAEGGRRGRRYFGLASRDEWISASSARIEKLNSRAPWKNSWTEEAPVNDKEDPYLTEDGSHLVFAVPRAPVDGAPCLVAAVNAFGRAGGFENLIVRLSPP-ALEETLPAPLAEAPLP---------------------PAPPSTNTPPDDTXXXXXXXXXXXPVAADEGGVVSSVTAATEGS------GKKVPAPAPAVPLEALRSALVAVASVRPLLARRVARAVLGRTATAVSAALKGASDSELRGLSRERLDGIVNGFREVLKRGHRSSEAYRRVEWLQLDLALKLYSCPFMERKLQGLKVLADAVAAAETPISS---SISQGSSPALTPQELVEWLDDNNFVKALFAGHTQLIRRSGDVVGFLCRERALTGGHVDIIWAAGGGGQDKDRRICVHEVLRPFLYQLDMALLERLVDKLRVQPPDEVIEDTVTFIRETAEATQQGGAAPAIRLLDLLWAMADDRSPYRPRIKANAAESILPVAGLRGLRGHRAQTLQRCVKNVEEGRAVVTSLKVLEAVLQNYPKDATSYEVLSRRDVIHNLEAESGLTELLLRELESYVAGSRSSTLPEDTSDGSLAADHSNNPPSPSPVSAGPASTAAGVRSLE--------------RRGG--SDKNDAHLAQVKARLHTLEHVFDNSRLVLSTEQIKRLWACLGPGP---------------------GPGLAGATPGEVSTLLSWFSKACEACEGEGGGGMFEPGVAAELFQELIVSDGEKRDFAATSASPEWFSCFQTFFFKVNRQSGRMHVTTAPTXXXXXXXPRADAASTAGQTRGRGGGDDAEGMVAATGDGDVGRDT------PPRDPDSPLDLVVIPSELSGMRALWNVALEAEDATVVDQATRLLNRTHQELAPGLRDRVGEIREEYINTCMAYVKKGNDDSTDLADSNNDALATTTTPGESSKXXXXXXXXXXXXXXXXXXXXXXXXXRRQRSVVRALHLLEEFVDETEMGGTVWIRGHGARVRGAKVVLNFENKVPEPNRMASSFKVEMHTNSQVWEVRRKVAHRGKMPVEDVELKVMSG----------ETGSGSRNGGYAGGTERRSVEALDRSNSRRLGDLGLRKGDVWVVSRRTGPAIGRSPLLDASGRLIPKARAIFEQWFHKFENAHGVMDRVGAARFIDSCCHDQCKPTDERVNKFFRNYDKTGDGYMRLDDFLRLFRDSCKDLPHVVWSNLRAHHYRDDLTRPSVYDPAATNTDERGEATPPEGDNPFRRTASQSQEQDLPLPRTIISRDPPSVKSLLGVLSLGGAAAAAAWRFLMRLPTNPEMLEGIRRLEGFRSGXXXXXXX-----------------KXKALLGPPGSHEMLYTLQIVDGVLDFLAGSGGLGDGPAGGNKEAFALDGPESVRESVGEWEGVDPEVWVVGFVRSGGFSQFCEAILTRGLFGDGLPEKMVDAQQACLALMLKVVRVVLLGVLSISTTEGQLDTPAATALSAPILLDDSEVTTAAGGTPEGGGVTAAEAT------PSLPNPAGNTPPTGEDAPPLSSQGATGAVAGAAAGDDVP---PTGGAEGDGQASP-------GASSSSEGG-----ATRCGSVYGSGVGVTSSADPG--SRERACGLWACLPRDVTAAVLGAMETPELQTRLMELAGVAADIADASSRTAGGAGGVRQQAGPPRPSETAPGSTAPLDLFGWVGEGAPADAMAQEALRLWVGVSRAPA-RRHGRLPLPSVERRVEGRQGVADDGRSSTTAGPGAAMDGPILKAIFCASDAIRLQLAQSLLSVCGGTG--------------------------------------GPVGSTGGEGVGALTAGSSSPMGGDVPSDDASGNTEEETDDGVLVSLGAXXXXXXXXXXXXXXXXXXXXSAGIRTTDGLREHVVRLLLANMPRA-----EGAGA--------------GPRRRRPSGRRDCTQLFDVLCSLVEESIKGAAAAAASCTTEA----------EHDRLRVDSLTADVVERLLAHPCTERRGAREADQDTLLVGLLKLEVTIVEACPEAALRVGEGLVEALLDDFLFAPPATASTASESLAPTRPKCKTVASRAMAYKLLAALCRPRFVSPAEGGRGGDDSAAEGSGGAFDVSHNLRLLLEKGLIPLRQLLSKPDVWGYSPSLGERSTVGRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGEGDTEPGSLVGELQKLFGHLTISEKQAVDPLPFLRMVKDLDGNPIDVSVQQDAQGFLLDLFDKMEAGLKNTPQSSLMSTFEGRQITQLICPKPAAXXXXXXXXXXXXXXXXXXXXTPPLEGEQE-----------------------------------------VEEGFDMRERGEAFMCVSLEVKNMVGVEDALEKFTEKEMIEGYAWDDERRDVSIYKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPTRLDLEPFTKEGLAWRERVEAAGGRGPEDAKRLGLPGPYEVHPRSYYTYELRGVVVHTGTANQGHYFSYIRDPKQQQQHASSFAEETVEGSSSGSSXXXXXXXXXXXXXXDADRSPSTASLSTDGVGGGGDESKEPATAAANGGT-------GLSQTEAEGAGGVGGADVDGKGPPQWCEFNDTMVKEWAVAGRRAGSEGGERGKEDGGG--RIGGLSTDCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQSYGA----GADTASPEEEGEGGSGERDPGNHGEEVAAPXXXXXXXXTGVGG---------VSTSAAEMEAAAVPPSVFRQVWDDNNKFLLDRQLYHPDMSNFVLDIIKAVRQLASASPATTGDRTKPSPGCLADTPAG--------------------------------ALEAKLPREVPPLSD---GVAVDLVEGFLEWGVRYLLDNLARALDNDAFAPLVEELQGLYDLRPEAAGAFLDAETEGGMQGMREMLLLCPDRSVRVAMRGFYLHLLGILAGAEGDRYLDYDDPPPTQQQLDPSLLADQSVTEGXXXXATAAIAGTPTATPTSSGTASALEEGTENALWPAAGDQVQ-------LQEEMEEERGRSSTRLGRVVAGWVSLLPDAARSWGRFEQFLEVIEGVGNMGDRERDLLLNRQMVCRLGSFFLQ----------EKSPMYD--PHKRLPRMGHKTAPPRFSPLVRCLRSLRAHSGETSRWQPRGSVQVESDTDTVSDSEGSRSDDS---MRAVKSMPVGPV-AAFPDSGADAINEEGGPLPLSLTTSLAPMDRETLEVTSGSPSSAAAA-----EEGGDAEVVGVAGVRGSR-MTAKERSRSVALSPGCRRCLNCETLYDLAFEEHHAPEAAAELMCAWAADASKLLRPLSRLIVQGVDSTPFADVDSWLLALRAWLEVDDTLKVERYQMVLGTGKQEVEPKLLLLMMLQQEKYDKWLFRVLMVVSELMAENAGIGAHVSKLRSHEMLPWADWMTKHLMDTYDAYGSALGGVGPLRVKEMDLIQIKENLSAYEKAYFGHTAEERLVDMTRRARIGPAEGEPGVTRVESSTSNGVQVEMLDATDTAMMMLGAGGGGHMTMAGGFPLKRFWRVTNHRMDSVTFTFKIEPTPSRLDTVYPSRRPNYHVPAGRDVTLLLKPRETAGIMEVDKLDLTREFQPHPFNWVFEALPETPTATEGAATAPXXXXXXXXXXXXXGEAVPTTVLPTALTASDLLEKQAQLEGDLGEAARVALKLEQEEAAEAQAAAIXXAKRAEEHE-LSQAVAATASSLPVIPYEVVSKVKADGISSSSEGKVGDAGADDAGRRAG 3925
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: X6LT97_RETFI (Ubiquitin domain-containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LT97_RETFI) HSP 1 Score: 228 bits (582), Expect = 6.360e-56 Identity = 170/525 (32.38%), Postives = 250/525 (47.62%), Query Frame = 1 Query: 7267 VVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEACPG----AGLPLREGLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGET-------DTDPGSLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLM-STFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDT-RERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
+VE+L A+ E +A D +L GL+ L ++ G AG + GLVE + + FLFA E PKCKT S+ + +RLL LC FD LR L+++ L + + P + YSP +ST VGL+NLG+TCY+NS LQQ +MM RN ++S G+ + S++ +V ++F L LSEKQA + F R+ KD G +DV VQQD Q F L D++E LK T LM F G+ + Q+IC + G + RER + F+ +SL +K+ ++++L+ + + E +EG D + KR VL KLP +V +HL RF++N +TF+ EK N RF+FP +LD EP+TKEGL E+++ A ++ + +P Y +HP YY Y+L GV VHTG+A+ GHY+SYI+D
Sbjct: 225 LVEQLKAYKSLET--FTDAINDKVLTGLMSLFSVLLAGDKGFRKEAG---QVGLVEEIFNHFLFA----TGKTEEDKEHNWPKCKTNVSKKLGFRLLVQLCMETPEN----FD---RLRKLIQE----LHEKVKPPSGYDYSPDRNTKSTRGYVGLKNLGSTCYMNSLLQQFYMMPHFRNAVISGGKEKAGNLTPEEQANSILFQVMRMFSYLTLSEKQAFNTREFCRSYKDETGRPVDVRVQQDVQEFFNILTDRIENELKGTKFRYLMHDCFGGKVVNQMIC----------------------------------------------------------------------------QGGCGSVREREQDFLMISLPIKSRTNMKESLDAYVQPEQLEGVQCDTCNNKCNTLKREVLYKLPNSVFVHLKRFELNFETFRHEKSNQRFEFPEELDFEPYTKEGLDRSEKVKVA-----QNNPNVEVPPQYSVHPPEYYKYRLTGVTVHTGSADAGHYYSYIKD 648
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: A0A6A7FZ21_9CRUS (Ubiquitinyl hydrolase 1 (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7FZ21_9CRUS) HSP 1 Score: 219 bits (559), Expect = 3.750e-53 Identity = 200/763 (26.21%), Postives = 316/763 (41.42%), Query Frame = 1 Query: 7099 GKDCTQLFEVLCALVDKSIKFGVDDHERATGEAGDQVAP-AAGPKRGRLDVDGLAADVVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEACPG----AGLPLREGLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGETDTDP-GSLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLMST-FEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRDPNLDASRPRPPSADTADSDGDDKSMAAGFSSXXXXXXXXXXXXXXXXXXXXGAVETSPPATTARDEGASPSLRTPGESSGEAVRAGGLDGQGQAPGSNKWCEFNDTMVKEWEVEGRTRGGEAGESVGGVGGGSSRLGGLEMDCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQSCGAEDRP 9366
G D + F +L L++ DH A+G ++ + +A +D + L +++ L H TE G+++ DK +LVG++KL +V AG GL L +DFLFA T +S +CKT SR +A+ LL LCR D N+ ++E + P L K +GY P +S+ VGLRNLG TCY+NS +QQ FMM LR + + G+ + D +++ ++Q LFG L S+++A D PF KD G+ ++ +QQD F L ++E +K TP L F G+ Q+IC RE E F+ VS++V+N ++ + + F +E++ + ++ HKR++ +LP ++LHL RF++N +TFQ EK+N+RF+FP LD+ P++KEG+ +E L+ A + + +P Y LHP+ YY + LRGV+VH GTA+ GHY+S+I ++ AA F S +S ++T E + N+W EFND++V+ + ++ R E + FGG+ + YG + I+NAYLL Y+R C +D P
Sbjct: 283 GVDVEEHFWILTQLLE--------DHSSASGSPSEESSSLSAVALSSSVDFEPLFNRLLKDLKNHVSTEVSGSKKVDK--VLVGIMKLLHVVVTDEKRFRLLAGNSQYGGLTSKLFEDFLFA------TGGKSS-----QCKTDLSRKVAFDLLVQLCR----------DTVENVTEVIEL-IVPQLSSLRKLSGFGYDPRRDTKSSTGFVGLRNLGATCYMNSLIQQFFMMPRLRYAIFAAGQGEGDKKDNVLYQIQALFGFLVESDRRAYDTTPFCHAYKDERGDPVNPRIQQDVYEFFNVLTTRLETQIKNTPFKLLFQDLFGGKFANQMICQGGCNK---------------------------------------------------------------------------VRENHEDFLNVSVQVRNRKDIDASFDAFVGEELLSDVNCEHCQKRADCHKRSLFLELPKILLLHLKRFELNYETFQNEKINSRFEFPMHLDVYPYSKEGIYRQEMLKLA-----KTDPSIVVPPMYVLHPKDYYEFDLRGVIVHLGTADAGHYYSFINA---------------------NRHEAAMFQS------------------------SSESSSTHSKE--------------------------KYHEKNRWFEFNDSLVRPFNLQSR-----------------------EREWFGGEVIEERPTFYGHKFEQSIEQIRNAYLLVYDR----CNIDDEP 835
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: X6MK36_RETFI (Ubiquitinyl hydrolase 1 n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MK36_RETFI) HSP 1 Score: 210 bits (535), Expect = 3.650e-50 Identity = 165/526 (31.37%), Postives = 234/526 (44.49%), Query Frame = 1 Query: 7312 AREADKDT----LLVGLLKL-GVTIVEACPGAGLPLREGLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGE-------TDTDPGSLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTP-QASLMSTFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEERRDVSIHKRTVLGKLPPNVVLHLN----------------RFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
+REA DT +L GL+ L V + L GL+E + + FLFA A E PKCKT R + +RLL C + +N L + + L + + P + +SP RST VGL+NLG+TCY+NS LQQ +MM RN L+ G T+ SL+ +V ++F L +SE+QA + F R+ KD GN +DV VQQD Q F L D++E LK + + L F G+ + Q+IC RER + F +SL +KN ++++LE + + E +EG D + + KR VL KLP V +HL RF++N +TF+ EK N RF+FP +L+LEPFTKEGL E+ + A E + +P PY HP YY Y+L GV VH+G+A+ GHY+SYI+D
Sbjct: 1211 SREAFDDTTNDKVLTGLMSLLSVLLSGEKSFRYLAGENGLLEEIFNHFLFA----TGKADEDRERNWPKCKTTICRKLGFRLLVQFC----------MESPKNFERLHQL-INDLHEKVQVPAEYDFSPERSTRSTRGYVGLQNLGSTCYMNSLLQQFYMMPHFRNALIWSGREIAKSMTTEEQGNSLLFQVMRVFSFLTMSERQAFNTKDFCRSYKDETGNPVDVRVQQDVQEFFNILTDRLENELKGSQFRYLLQDCFGGQVVHQMICQGGCGK---------------------------------------------------------------------------VREREQDFAMLSLPIKNRANMKESLEAYVQPEHLEGVECDTCNKKCNTLKREVLNKLPNTVFVHLKVKKKKCALIENNNNKKRFELNFETFRHEKSNQRFEFPEELNLEPFTKEGLNRIEKAKIA-----ELNPNVEVPQPYSAHPEKYYKYKLVGVTVHSGSADAGHYYSYIKD 1641
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: X6MR44_RETFI (Ubiquitin carboxyl-terminal hydrolase family protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6MR44_RETFI) HSP 1 Score: 197 bits (501), Expect = 3.420e-46 Identity = 166/555 (29.91%), Postives = 241/555 (43.42%), Query Frame = 1 Query: 7255 LAADVVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEACPGAGLPLRE-GLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGET---DTDP----GSLVGEVQKLFGQLALSEKQAVDPLPFLRTVKD-----------------------------LDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTP-QASLMSTFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDT-RERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
L D++++L AH E G DK +L G + L ++ E GLVE + FLFA E PKCKT +R + +RLL LC + +N L EK + L + P +GYSP RS VGL NLG+TCY+NS LQQ +MM RN ++ G+ D P S + +V + F L LSE+QA + F R+ KD L G IDV VQQD Q F L D++E LK T + L F G+ + Q+IC + G + RER + F+ +SL +KN ++++L+ + + E +E + + + KR VL KL +V++HL RF++N +TF+ EK N RF+FP +LDLE +TKEGL E+++ A E + +P Y +H YY ++L GV VHTG+A+ GHY+S+I+D
Sbjct: 1624 LFKDLIKQLKAHKSREVFGNPANDK--VLTGAMSLLSVLLSGDKSFREQAGESGLVEEIFKYFLFA----TGKTDEEKENNWPKCKTNVNRKLGFRLLVQLC----------MEVPQNFGHL-EKLIQTLHKEVRPPISYGYSPDQNTRSNRGYVGLENLGSTCYMNSLLQQFYMMPHFRNAIICSGKEKAKDMTPEQQADSALYQVMRTFSFLTLSERQAFNTREFCRSYKDETVCILYTDQSLAIFFYNFFFFFFLPFKILQGRPIDVRVQQDVQEFFNILTDRIENELKGTKFRYLLQDCFGGKVVNQMIC----------------------------------------------------------------------------QGGCGSVRERQQDFVMISLPIKNRTNMKESLDAYVQPEQLEDVQCEACNKKCTTLKREVLYKLGNSVIVHLKRFELNFETFRHEKSNQRFEFPEELDLEQYTKEGLDRLEKVKIA-----ESNPNVEVPQQYSVHSPEYYKFRLTGVTVHTGSADAGHYYSFIKD 2080
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: X6NPH8_RETFI (Ubiquitin carboxyl-terminal hydrolase family protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NPH8_RETFI) HSP 1 Score: 195 bits (495), Expect = 5.480e-46 Identity = 159/524 (30.34%), Postives = 228/524 (43.51%), Query Frame = 1 Query: 7303 RRGAREADKDTLLVGLLKLGVTIVEACPG-AGLPLREGLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLL----SLGETDT---DPGSLVGEVQKLFGQLALSEKQAVDPLPFLRTVKD--------------LDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTP-QASLMSTFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDT-RERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
R + D +L GL+ L ++ L GLVE + + FLFA E PKCKT SR + +RLL LC F+ +R L L + + P P + YSP RS +GL+NLG+TCY+NS LQQ +MM RN ++ GET T S++ ++ K+F L LSEK+A + F KD L G +DV +QQD Q F L D++E LK+T + L F G+ I Q+IC + G T RER + FM +SL +KN + ++L+ + + E ++G D + S KR VL KLP + +HL RF++N +TF+ EK N R +FP +DL+P+TKEGL +E + A + + L + YY Y+L GV VHTG+A+ GHY+SYI+D
Sbjct: 453 RENFEDLKNDKILTGLMSLFSVLLSTDKSFRKLSGDHGLVEVIFNHFLFA----TGKEEEDKENNWPKCKTITSRKLGFRLLVLLCMEMPEN----FERTRKLIQTLHQKVRP-------PLGFDYSPDRNTRSKRGYMGLKNLGSTCYMNSLLQQFYMMPQFRNAVIWGGKEKGETMTFMEKSNSVLYQLMKMFSYLTLSEKEAFNTRDFCLAYKDETVSIIKTQHIIHFLLGKPVDVRIQQDVQEFFNILTDRIENELKSTKFRYLLQDCFSGKVIHQMIC----------------------------------------------------------------------------QGGCGTVREREQDFMMLSLPIKNRNNLRESLDAYVQPEQLDGVQCDTCNKKCSTLKREVLFKLPNTIFVHLKRFELNFETFRHEKSNQRLEFPEAIDLKPYTKEGLNEQENAKKAQSNPTTEVQELN-----NVSSLDYYKYKLVGVTVHTGSADAGHYYSYIKD 880
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: F0ZN87_DICPU (Ubiquitinyl hydrolase 1 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZN87_DICPU) HSP 1 Score: 194 bits (492), Expect = 4.220e-45 Identity = 171/587 (29.13%), Postives = 251/587 (42.76%), Query Frame = 1 Query: 7093 RKGKDCTQLFEVLCALVDKSIKFGVDDHERATGEAGDQVAPAAGPKRGRLDVDGLAADVVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEACPGAGLPLRE--GLVEALLDDFLFAPPTPASTASESMAPT-RPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPD----VWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGETDTDPG----SLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLMSTF-EGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEG---YAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPY--ELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
R+ C Q FEVLC+L+ + + E D+ + G +++ + P E ++D LL+GLL L ++E L + GLV+ + + LF T +E+ PT PKCKT SR + + +L L KG + + + LL HKP+ +W Y P+ E+ST VGL+NLG TCY+NS +QQLFM+ R ++ E P SL+ +++ +F L SEK++ DP F K DG I+ S+Q DA F LFDK+E LK + Q L+ F G + Q I +E ER E F +S+EVKN ++++L+ F E E ++G Y + V R + LP +++H RF+ +LD + K+N FP +D+EP+TKE L ER EA E AK G P P LHP YY Y+L G++VHTGTA+ GHY+SYI++
Sbjct: 1132 RRSSSCQQFFEVLCSLLQ----------DTCSQEGSDRFSDLLGT-------------LIQMIKTQPIVESTAIYQSD--VLLMGLLNLVKILIENNNDFKLMAGQEGGLVKEIFHECLFNIAT-----AENHGPTCPPKCKTRDSRDVCFAVLLELA-------KGCPENLKEITTLLMDH--------HKPEEKRSLWSYYPAGNEKSTCGYVGLKNLGATCYINSLMQQLFMIPGFRYNIIQSEEKSLTPQDQQESLLYQLKIIFANLQESEKKSHDPKDFCLAYK-YDGQPINTSIQMDADEFFNMLFDKLENQLKGSTQEKLLQDFFGGSSVNQFIS----------------------------------------------------------------------------QECNHVSEREEPFYTISVEVKNKKEIQESLQLFVESETLDGDNKYFCSNCSQKVKALMRRCIKNLPNTLIIHNKRFEFDLDLMKRTKLNDALRFPMTIDMEPYTKEYL---ERKEAV-----EKAKEKGEPIPEYAPLHPPQYYQYELAGILVHTGTADSGHYYSYIKE 1588
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: Q553T4_DICDI (Ubiquitinyl hydrolase 1 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q553T4_DICDI) HSP 1 Score: 194 bits (492), Expect = 4.310e-45 Identity = 167/587 (28.45%), Postives = 253/587 (43.10%), Query Frame = 1 Query: 7084 AHRRKGKDCTQLFEVLCALVDKSIKFGVDDHERATGEAGDQVAPAAGPKRGRLDVDGLAADVVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEACPGAGLPLRE--GLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPD----VWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGETDTDPG----SLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLMSTF-EGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEG---YAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
A R+ C Q F+VL L+++ ++ D ++ + + D L +V+ + P E + D LL+GLL L +++ L + GLV+ + + LF +TA + PKCKT SR + + +L L KG R + LL + HKP+ +W Y P+ E+S VGL+NLG TCY+NS +QQLFM+ R ++ E P SL+ +++ +F L SEK++ DP F T K DG I+ S+Q DA F LFDK+E LK+TPQ L+ F G + Q I +E ER E F +S+EVKN ++++L+ F E E ++G Y + V R + LP +++H RF+ +LD + K+N FP +D+EP+TKE L +E +E A +G +P LHP SYY Y+L G++VHTGTA+ GHY+SYI++
Sbjct: 1208 ADDRQSSTCQQFFDVLNHLLNEQVRSLTIDASTSSFTS--------------VYAD-LLLKLVDMIKTQPIIESTAIYQPD--VLLMGLLNLVKILIQDNNEFKLLAGQKGGLVKEVFHECLFN----IATADNHGSTCPPKCKTKESRDICFAVLLELA-------KGCEPNLREITTLLMEH--------HKPEEKRSLWSYFPAGNEKSITGYVGLKNLGATCYINSLMQQLFMIPGFRYNIIQSEEKYNSPQEQQESLLYQLKIIFANLQESEKKSHDPKDFCLTYK-YDGQPINTSIQMDADEFFNMLFDKLENTLKSTPQEKLLKDFFGGSSVNQFIS----------------------------------------------------------------------------QECNHVSEREEPFYTISVEVKNKKEIQESLQLFVESETLDGDNKYFCSSCSQKVKALMRRCIKDLPNTLIIHNKRFEFDLDLMKRTKLNDALRFPMTIDMEPYTKEYLERKEAIEKAKEKGEP------IPEVAPLHPPSYYQYELAGILVHTGTADSGHYYSYIKE 1675
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: L8GPA8_ACACA (Ubiquitinyl hydrolase 1 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPA8_ACACA) HSP 1 Score: 193 bits (490), Expect = 7.240e-45 Identity = 162/521 (31.09%), Postives = 236/521 (45.30%), Query Frame = 1 Query: 7267 VVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVEAC----PGAGLPLREGLVEALLDDFLFAPPTPASTASESMAPTRP-KCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLHKPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLSLGETDTDPG-SLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLMSTFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEG---YAWDEERRDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEAAGGRGPEDAKRLGLPGPYELHPRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
++ L HP E R + D +L G++ L T+V A AG R GLV L LF PT E P P +CKT+++R A+RLL L A N L + + RD K +W Y PS+ E++ VGL+NLG TCY+NS +QQ FM+ R G+L + +++ SL+ ++Q +FG L SEK+ D PF + KD +G ++V QQDA F+ L D++E+ LK T + L+S F G ++ I K T ER E F +SL++KN + ++L + E +++EG + E V KR + LP N+++HL RF+ +L+T + K+N FP LD+EP+TKEGLA +E G ED LP E SYY Y+L G++VHTGTA+ GHY+S+IR+
Sbjct: 1260 LITMLKDHPTAELRNSEAVDH--VLYGVMSLLKTLVSADLEFKNKAGSQHRGGLVHELFHKCLFNIPT-----MERHGPDAPPQCKTSSTRNCAFRLLTEL----------ADSTQENYAALADLLVQQHRDG-EKRSLWKYQPSAYEKAACGYVGLKNLGATCYMNSLMQQFFMIPGFRWGMLEVQDSEEKKEESLLWQLQTIFGYLQESEKKYYDTRPFCSSYKDWEGQPMNVGQQQDADEFMNMLLDRLESILKKTQEEKLLSQFFGGALSNQIISKDCTH---------------------------------------------------------------------------VSEREENFFTLSLDIKNKKSILESLALYVEGDMLEGDNKFHCSECNAKVDALKRCCVKNLPDNLIVHLKRFEFDLETMKRIKLNDSCQFPMILDMEPYTKEGLAKKE------GTSLED-----LPQRDE----SYYKYELAGILVHTGTADYGHYYSFIRE 1672
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Match: A0A5A8DEP8_CAFRO (USP domain-containing protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DEP8_CAFRO) HSP 1 Score: 189 bits (480), Expect = 1.180e-43 Identity = 187/683 (27.38%), Postives = 270/683 (39.53%), Query Frame = 1 Query: 7108 CTQLFEVLCALVDKSIKFGVDDHE-----RATGEAGDQVA---PAAGPKRGRLDVD--GLAADVVERLLAHPCTERRGAREADKDTLLVGLLKLGVTIVE---------ACPGAGLPLR--EGLVEALLDDFLFAPPTPASTASESMAPTRPKCKTAASRAMAYRLLAALCRPRAAGGKGAFDPSRNLRLLLEKGLTPLRDLLH--KPDVWGYSPSSGERSTVCRVGLRNLGNTCYVNSCLQQLFMMEPLRNGLLS----LGETDTDPG---------------------------------------SLVGEVQKLFGQLALSEKQAVDPLPFLRTVKDLDGNAIDVSVQQDAQGFLLDLFDKMEAGLKTTPQASLM-STFEGRQITQLICPKPTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEEGFDTRERGEAFMCVSLEVKNMVGVEDALEKFTEKEIIEGYAWDEER-RDVSIHKRTVLGKLPPNVVLHLNRFKMNLDTFQTEKVNTRFDFPAKLDLEPFTKEGLAWRERLEA-AGGRGPEDAKRL---GLP---------------------------------------GPYELH-------PRSYYTYQLRGVVVHTGTANQGHYFSYIRD 8802
C Q F +L ++ + + R++ E + VA P AG L+V +A ++ R+ HP ERRG E D LL+G+LK+ T+ E A PG G+P + + + + +D LF PT A E++AP PKCK A +RA A+ LL+AL R PS R+ L + D + KP +P+ R+ VGLRNLG CY+NS +QQLFM+ R G+L+ + + DT G S + ++Q++F L++S+++ DP P+ + KD GN ++V +QQDA+ F+ +K+ LK + Q SL+ F G + Q+ CP E RE+ F + L V N V +AL E E + Y D + KR VLG+LP ++LH R + DTF +K+NTRF FP +LD+ FT+EG+ ER+ A AGG L G P G H P Y Y L G+VVHTGTA GHYFS+I+D
Sbjct: 2095 CVQFFSLLTRILRHMVALSTESPAVELTARSSAEVPEAVAAAAPPAGASASPLEVRLMPVAKSLMRRVTCHPPLERRGGTE-QVDQLLMGVLKVLATLAEGIPALRSLAAEPGTGVPGKPDDTFMRVVFEDCLFFQPTTAEDLDETVAPVLPKCKRARTRAAAFALLSALARG---------QPSNVARM--SDSLVTVMDAVKGDKPSQSALNPNLSRRAACGYVGLRNLGCICYMNSMMQQLFMVPHFRFGVLAADCEVTDDDTHDGTRDIPNDVADAVKVWKEGAGAKGAAVEGGAAAVPTPASESPLYQLQRMFASLSMSQRRDYDPRPWCNSFKDSGGNPVNVGIQQDAEEFVNAFLNKVSESLKGSKQHSLVRDCFTGTTVDQMCCP----------------------------------------------------------------------------EFQWIREKRTVFHHLPLTVANNSDVYEALRGSIECETLSEYKCDAAPDTPTQLEKRQVLGQLPDTLMLHFKRMVFDFDTFLNKKINTRFAFPHELDMYAFTREGVMEEERIAAQAGGATSSFLSALRAKGDPVAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSTSSGARARHEDGRLKSPSDEYLYDLAGIVVHTGTAQSGHYFSFIKD 2689 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.923.1 >prot_C-linearis_contig104.923.1 ID=prot_C-linearis_contig104.923.1|Name=mRNA_C-linearis_contig104.923.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=4205bp PRPRRRAALTGTEMDHCAGGVTQDASDHARSLVAFEEILEFLVVRLSQASback to top mRNA from alignment at C-linearis_contig104:532819..572493+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.923.1 ID=mRNA_C-linearis_contig104.923.1|Name=mRNA_C-linearis_contig104.923.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=39675bp|location=Sequence derived from alignment at C-linearis_contig104:532819..572493+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:532819..572493+ >mRNA_C-linearis_contig104.923.1 ID=mRNA_C-linearis_contig104.923.1|Name=mRNA_C-linearis_contig104.923.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=25230bp|location=Sequence derived from alignment at C-linearis_contig104:532819..572493+ (Chordaria linearis ClinC8C monoicous)back to top |