Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 931 |
| Cds size | 930 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.248864-CDS-C-linearis_contig104:398177..398641 | 1622927381.248864-CDS-C-linearis_contig104:398177..398641 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 398178..398641 + |
| 1690879666.7978754-CDS-C-linearis_contig104:398177..398641 | 1690879666.7978754-CDS-C-linearis_contig104:398177..398641 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 398178..398641 + |
| 1622927381.2601688-CDS-C-linearis_contig104:399146..399612 | 1622927381.2601688-CDS-C-linearis_contig104:399146..399612 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 399147..399612 + |
| 1690879666.807197-CDS-C-linearis_contig104:399146..399612 | 1690879666.807197-CDS-C-linearis_contig104:399146..399612 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 399147..399612 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.901.1 >prot_C-linearis_contig104.901.1 ID=prot_C-linearis_contig104.901.1|Name=mRNA_C-linearis_contig104.901.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=310bp
GPSPAPSPPPPATSTSPPSASTSPPATSISPTSTDTPPPATSISPAPPSP
PAATAGTVEPERPAPFSGAMVGGDDSSKVEGKGGSDNPLCSSSSGGGGGR
GDPGSSNPGGDADAGADAGVGAGVGAKRPASAMDPSDDGDDDDGSAAEPP
LQLRRISREEEEPKEWNEGEGAPPEAREQPTAAAPAKGAARSTSTSTSTS
SSAPTTTTTTTTPGSAQGSRETSSGSGSRSGNGGGNSGGDGQASREDPSS
SSYSSPSSFSPSPSLPAQAQQRQPQDSSDNCGGLVGGLVGTKPGVSAGES
DPAAEAVGGE back to topmRNA from alignment at C-linearis_contig104:398178..399612+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig104.901.1 ID=mRNA_C-linearis_contig104.901.1|Name=mRNA_C-linearis_contig104.901.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1435bp|location=Sequence derived from alignment at C-linearis_contig104:398178..399612+ (Chordaria linearis ClinC8C monoicous)
GGACCGTCACCAGCCCCATCCCCGCCTCCTCCTGCCACCAGCACATCCCC
TCCTTCCGCCAGCACGTCTCCTCCTGCCACCAGCATATCTCCTACTTCCA
CCGACACACCTCCTCCTGCCACCAGCATATCCCCAGCCCCTCCTTCTCCC
CCCGCCGCCACGGCTGGAACGGTGGAGCCGGAGCGCCCGGCGCCCTTCTC
GGGCGCCATGGTTGGGGGGGACGATAGTAGTAAGGTGGAGGGTAAGGGAG
GGTCTGACAACCCCCTATGTTCGAGCAGCAGCGGCGGCGGCGGCGGCAGA
GGTGACCCTGGTTCTAGTAATCCTGGTGGTGATGCTGATGCTGGTGCTGA
CGCTGGTGTTGGTGCTGGTGTTGGTGCCAAGAGACCGGCGTCGGCGATGG
ACCCAAGCGACGACGGCGACGACGACGATGGTAGTGCCGCGGAGCCGCCC
CTCCAGCTGAGAAGGTATGTATGCGTGTGCGCATATGGTGGTTTTTCGGT
TGTGTTTCGTCCAAGATTGGAGGCTGCAGAAGAGGTGATGGTTAATTTAT
TTCGTTTTTGTTGTTTTTTGTGTTTTGGTTCTTTTCTCGCGCACAGCGGG
ATAAAAAGGCGAGCCACAAGCAGAGTTATTGATTTTCGAAGTCAGGGGCA
GGATTTGAGACAAGTGTGAACTCACAAAGACGGTTGGCTGTTTCAAGCAC
AGAGAGGCGCAGGGAAATCGTACTGAATTCAGCCGGCCGAAAAAAATTAC
GGGGGCAACAGCTCTACTGCTGTAGAAAAGACCGGCGCTTATCGAGCGTA
CACATTCAACACACGATACCGTTAGGCCCCAGCACAGAAGGCGGCACCAC
AGGCACCCAGACGACTAGAATAAAAAAAAAGATAATGCAAATTGAGGTTG
ACACACTCAAGAAGCAAGATATTAACCAGAGTGTCCTATGATACATTGCC
ACCCTCTCGATGCCGGTAGGATTTCCCGCGAGGAAGAAGAGCCAAAAGAA
TGGAATGAAGGGGAAGGGGCACCCCCGGAAGCCCGTGAGCAGCCGACCGC
CGCCGCCCCCGCCAAGGGCGCGGCACGATCCACATCGACGTCGACATCAA
CATCATCATCGGCACCCACGACAACGACGACGACGACGACACCCGGCAGC
GCCCAAGGAAGCCGGGAGACTAGTAGCGGTAGCGGCAGCAGGAGCGGTAA
CGGTGGCGGCAATAGCGGCGGTGATGGCCAAGCCTCCCGAGAAGACCCCT
CTTCCTCTTCCTATTCCTCTCCCTCTTCCTTTTCCCCTTCCCCTTCGCTG
CCAGCACAGGCGCAGCAGCGGCAGCCGCAGGACAGCAGTGATAATTGTGG
TGGTTTGGTCGGGGGTTTGGTCGGGACGAAGCCGGGAGTAAGCGCCGGCG
AGTCGGACCCTGCGGCGGAGGCGGTGGGAGGCGAG back to topCoding sequence (CDS) from alignment at C-linearis_contig104:398178..399612+ >mRNA_C-linearis_contig104.901.1 ID=mRNA_C-linearis_contig104.901.1|Name=mRNA_C-linearis_contig104.901.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1860bp|location=Sequence derived from alignment at C-linearis_contig104:398178..399612+ (Chordaria linearis ClinC8C monoicous)
GGACCGTCACCAGCCCCATCCCCGCCTCCTCCTGCCACCAGCACATCCCC
TCCTTCCGCCAGCACGTCTCCTCCTGCCACCAGCATATCTCCTACTTCCA
CCGACACACCTCCTCCTGCCACCAGCATATCCCCAGCCCCTCCTTCTCCC
CCCGCCGCCACGGCTGGAACGGTGGAGCCGGAGCGCCCGGCGCCCTTCTC
GGGCGCCATGGTTGGGGGGGACGATAGTAGTAAGGTGGAGGGTAAGGGAG
GGTCTGACAACCCCCTATGTTCGAGCAGCAGCGGCGGCGGCGGCGGCAGA
GGTGACCCTGGTTCTAGTAATCCTGGTGGTGATGCTGATGCTGGTGCTGA
CGCTGGTGTTGGTGCTGGTGTTGGTGCCAAGAGACCGGCGTCGGCGATGG
ACCCAAGCGACGACGGCGACGACGACGATGGTAGTGCCGCGGAGCCGCCC
CTCCAGCTGAGAAGGGACCGTCACCAGCCCCATCCCCGCCTCCTCCTGCC
ACCAGCACATCCCCTCCTTCCGCCAGCACGTCTCCTCCTGCCACCAGCAT
ATCTCCTACTTCCACCGACACACCTCCTCCTGCCACCAGCATATCCCCAG
CCCCTCCTTCTCCCCCCGCCGCCACGGCTGGAACGGTGGAGCCGGAGCGC
CCGGCGCCCTTCTCGGGCGCCATGGTTGGGGGGGACGATAGTAGTAAGGT
GGAGGGTAAGGGAGGGTCTGACAACCCCCTATGTTCGAGCAGCAGCGGCG
GCGGCGGCGGCAGAGGTGACCCTGGTTCTAGTAATCCTGGTGGTGATGCT
GATGCTGGTGCTGACGCTGGTGTTGGTGCTGGTGTTGGTGCCAAGAGACC
GGCGTCGGCGATGGACCCAAGCGACGACGGCGACGACGACGATGGTAGTG
CCGCGGAGCCGCCCCTCCAGCTGAGAAGGATTTCCCGCGAGGAAGAAGAG
CCAAAAGAATGGAATGAAGGGGAAGGGGCACCCCCGGAAGCCCGTGAGCA
GCCGACCGCCGCCGCCCCCGCCAAGGGCGCGGCACGATCCACATCGACGT
CGACATCAACATCATCATCGGCACCCACGACAACGACGACGACGACGACA
CCCGGCAGCGCCCAAGGAAGCCGGGAGACTAGTAGCGGTAGCGGCAGCAG
GAGCGGTAACGGTGGCGGCAATAGCGGCGGTGATGGCCAAGCCTCCCGAG
AAGACCCCTCTTCCTCTTCCTATTCCTCTCCCTCTTCCTTTTCCCCTTCC
CCTTCGCTGCCAGCACAGGCGCAGCAGCGGCAGCCGCAGGACAGCAGTGA
TAATTGTGGTGGTTTGGTCGGGGGTTTGGTCGGGACGAAGCCGGGAGTAA
GCGCCGGCGAGTCGGACCCTGCGGCGGAGGCGGTGGGAGGCGAGGATTTC
CCGCGAGGAAGAAGAGCCAAAAGAATGGAATGAAGGGGAAGGGGCACCCC
CGGAAGCCCGTGAGCAGCCGACCGCCGCCGCCCCCGCCAAGGGCGCGGCA
CGATCCACATCGACGTCGACATCAACATCATCATCGGCACCCACGACAAC
GACGACGACGACGACACCCGGCAGCGCCCAAGGAAGCCGGGAGACTAGTA
GCGGTAGCGGCAGCAGGAGCGGTAACGGTGGCGGCAATAGCGGCGGTGAT
GGCCAAGCCTCCCGAGAAGACCCCTCTTCCTCTTCCTATTCCTCTCCCTC
TTCCTTTTCCCCTTCCCCTTCGCTGCCAGCACAGGCGCAGCAGCGGCAGC
CGCAGGACAGCAGTGATAATTGTGGTGGTTTGGTCGGGGGTTTGGTCGGG
ACGAAGCCGGGAGTAAGCGCCGGCGAGTCGGACCCTGCGGCGGAGGCGGT
GGGAGGCGAG back to top
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