mRNA_C-linearis_contig104.890.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: D7G5E2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E2_ECTSI) HSP 1 Score: 666 bits (1719), Expect = 2.410e-216 Identity = 336/591 (56.85%), Postives = 423/591 (71.57%), Query Frame = 2 Query: 1709 SSECAQRMGVQG*PGQSTSN---GFSQT----HRHIAWVTPRCDISLNPHPHLNLQVQEMDVWHPKDSAVYWEGPVNVSLGVTLAGPGTLDLDLRHVHACADTESSWPIMDWSRFCVSLEELASPDS-QPSLVFGSTIGVVEGSVSLRDARPGCFPASSPRGGVLLMAEGLDGGRPRLASTSVRFKIIHHESTFRRRGRPIGPVPLGRGHTSIQDLIQDLEREAEEEASAAIEEMESYTNLSRGTTVELNREFCFSRLSVNGRSTALASTGHQVQFYADQLEWMISERKLPPEMAFAVNRMREVRKILPPKVSPFVSMPGI---LNGWWRRIGPFFQKGLLMPMPAPEKVVSNSPLHTWEYDEIPWMEALNPDVDWHAVEEAYLGNQPVPITHVDDFFSPKALTILLDLARGTSIFVENRVNYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGIEEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFG 3448
+++C ++G S+ N GF T R + V D+SL+ + +VQ M+V HPK+ AVYWEGPVNV L VTL+G G LD+ +VH CADT+ SWP++D SR CVSL++LAS D +P LVFG+ IGVVEG+VS+RDARP C P RG VL M + ASTS+RFK+IHHES FRRRG+P+GP P GRG + Q+ IQ+LEREA+EE AA++ E + N + V+ ++ C SRL + R T+L ++ Q++F+ DQ+ WM+S +LPPEMA+A++R++EV K L P S +PG+ L WR IG FFQK L++P+P+ + V S SPL TWEYDEIPWMEALNP+VDW+AVEEAYLGN PV I H+D FFS KAL LLD+A G+SIFV+ R NY+GAY EGMSHP+LYQIAEE A RLPRILGRDTPGWPL QTWFY+YGGNDGE+CT GI+VHADTA +N+N+WL DSANLG +T DGGGLTVFHA+PP DW F +FN++ I+ FL+E+ AG+TSVP RQNRAL+FDSMLFHQSDPFRFKKG L FG
Sbjct: 633 ATKCLAHRFIEGATAWSSVNEDFGFDATVCASSRSLELVM--IDVSLH-----SAEVQAMEVTHPKEGAVYWEGPVNVDLEVTLSGTGVEGLDISNVHVCADTDISWPLLDRSRSCVSLQQLASSDQDKPYLVFGTAIGVVEGTVSIRDARPTCTPPGDLRGPVLAMEK----NPQEFASTSMRFKVIHHESMFRRRGKPLGPAPFGRGFATTQEYIQELEREADEELGAALDATEHFINTTHAPVVQTGKQLCSSRLVLKDRVTSLFASAFQLEFHIDQISWMLSTGRLPPEMAYAIDRLKEV-KALYPSNSAGEDVPGVVLCLGPSWRPIGSFFQKALVLPVPSADNVASLSPLQTWEYDEIPWMEALNPNVDWNAVEEAYLGNGPVEIVHIDGFFSQKALAALLDIAHGSSIFVDVRENYLGAYLGEGMSHPLLYQIAEEVAVRLPRILGRDTPGWPLAQTWFYIYGGNDGERCTRGIRVHADTAEINLNIWLTDDSANLGSVETDDGGGLTVFHAKPPGDWGFQEFNQEPDAIQAFLEEN-DAGNTSVPYRQNRALMFDSMLFHQSDPFRFKKGIFRLAARLLTYFG 1210
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A6H5LAR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAR2_9PHAE) HSP 1 Score: 527 bits (1357), Expect = 1.590e-172 Identity = 266/468 (56.84%), Postives = 323/468 (69.02%), Query Frame = 2 Query: 2054 ASPDSQPSLVFGSTIGVVEGSVSLRDARPGCFPASSPRGGVLLMAEGLDGGRPRLASTSVRFKIIHHESTFRRRGRPIGPVPLGRGHTSIQDLIQDLEREAEEEASAAIEEMESYTNLSRGTTVELNREFCFSRLSVNGRSTALASTGHQVQFYADQLEWMISERKLPPEMAFAVNRMREVRKILPPKVSPFVSMPGI---LNGWWRRIGPFFQKGLLMPMPAPEKVVSNSPLHTWEYDEIPWMEALNPDVDWHAVEEAYLGNQPVPITHVDDFFSPKALTILLDLARGTSIFVENRVNYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGIEEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFG 3448
+S +P LVFG+ IGVVEG+VS+RDARP C P RG VL M E ASTS+RFK+IHHES FRRRG+P+GP P GRG + Q+ IQ+LEREA+EE AA++ E + N + V+ ++ C SRL + R T+L ++ Q+ F+ DQ++ + + N E +PG+ L WR IG FFQK L++P P+ + V S SPL TWEYDEIPWMEALNP+VDW+AVEEAYL N V I H+D FFS KAL LLD+A G+SIFV+ R NY+GAYP EGMSHP+LYQIAEEAA RLPRILGRDTPGWPL QTWFY+YGGNDGE+C GI+VHADTA +N+N+WL DSANLG +T DGGGLTVFHA+PP DW F +FN+D I+ FL E AG+TSVP RQNRAL+FDSMLFHQSDPFRFKKG L FG
Sbjct: 31 SSDQDKPYLVFGTAIGVVEGTVSIRDARPTCTPPGDLRGPVLAMEE----NPQEFASTSMRFKVIHHESMFRRRGKPLGPAPFGRGFATTQEYIQELEREADEELGAALDATERFVNTTYSPVVQTGKQMCSSRLVLEDRVTSLFASAFQLDFHIDQVKGL-----------YPTNPAGE-------------DLPGVVLCLGPSWRSIGSFFQKALVLPAPSADNVASLSPLQTWEYDEIPWMEALNPNVDWNAVEEAYLVNGAVKIVHIDGFFSQKALAALLDIAHGSSIFVDVRENYLGAYPGEGMSHPLLYQIAEEAAVRLPRILGRDTPGWPLAQTWFYIYGGNDGERCMRGIRVHADTAEINLNIWLTDDSANLGSVETDDGGGLTVFHAKPPGDWGFQEFNQDPDAIQAFL-EANDAGNTSVPYRQNRALMFDSMLFHQSDPFRFKKGILRLATKLLTCFG 469
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: D7FK46_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK46_ECTSI) HSP 1 Score: 369 bits (947), Expect = 1.710e-111 Identity = 234/618 (37.86%), Postives = 324/618 (52.43%), Query Frame = 1 Query: 16 VAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDMDFLIGEEEGKLDFVQELADIEASFKFLSPTPTRVVWHQGQAGLIPNSCPGSTHYYGGGTASSXXXXXXXXXXXXXXXXXGSRYRDQVSTGGAHVSRLPQVGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDSNKDDGFAYDWIVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYFSAVSAFHSCDSGSWPPGEPWWQPECGGGGGFQESVLFRHLHANNVAYRPYPMFDYHVVQPQREDGGGERDGDNGCGAKTAAEHETACVILGAASLLPSRCVRRRDCNAALSEYAGLRCRTL---TGLHSRERVAPETFLEPEDPTAWEAALVGAPVDE------------ERTNARAGENQGGLNMGALHDLDRIRSKLVSLRDAVWVGSKGLQMQFEGTEERLNPEDLQTSGFHQSQQRRRNVEKPEPEETRYSWAINSQDSCCIEE--YPGRAPHVIRSYSTEPSLMKEMALATMCIAHRLSGGHRLDGTD-DFNICSGGRSLELVMVDVLLHSEELGVCTADGSSGLTGTEHVQRFFADPSAHCVGYASL 1815
+ SG +RSFV P VHRS R +++ESIK +GC+VDVFAY +D + + ++ +F +D+E + L PT R++WHQ QAG+IPN C G + T + S W R + YW+LY SLAAYRMA++ E+ GF YDW++ R VAW RPLPPLR+FSR+AVW G WP+SD ALVPR F+DR+FSAV F++CD SWPP WWQPEC G F+ESVLFRHLHA+ + YR YP+FD+ + + G G G +E C +LG + L R C AL+EY+ LRCRTL G+ RV + L+PE P AWEA L +P+ E T + + ++ D+D R KLV LRDA+ S L+ +E + + R +++ +T W I+S C + E +PG +PHV+ Y+ L++E+ + C R+ G ++ G D + + C+G RSL+LVM+DV LH+EELG+CTADGS GL+ +E V RFF +P+AHC GY L
Sbjct: 1 MCFSGAIRSFVHPAVHRSIRTNLIESIKADGCEVDVFAYVTREDTV--VKAKQVENPEFTPNSSDVEVALAVLEPT--RLLWHQDQAGIIPNGCAGVNN----------------------------------RTDASRHSARHLWYWEQRYSPEASRSLYWQLYKSLAAYRMALR------EEKRIGSGFTYDWVIRGRLDVAWARPLPPLRSFSRQAVWFGRHYWPMSDHFALVPRKFSDRFFSAVKTFYACDGRSWPPPSSWWQPECATIG-FEESVLFRHLHASEIPYRFYPLFDFIITR-------GVIGGVCKLGFIVYSE---VCSLLGLWNALQPP-FSRDHCLEALAEYSDLRCRTLFPARGMEDERRV--DAILDPE-PRAWEALLDSSPLLEPIPAVAAPGPLGRATEGDSSDASIYTSVAKAEDVDSARLKLVLLRDALQAPSP-LEPHYE-------------MALREEAKERSLLDRWGGWKTHPLWWIHSIMGCPLAEPQHPGPSPHVVLYYTMGEPLVRELVQSVKCFVSRIIGETQVGGGDTNQSSCNGVRSLDLVMIDVSLHTEELGICTADGSLGLSASEQVSRFFDNPAAHCAGYGRL 545
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A6H5KVJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVJ6_9PHAE) HSP 1 Score: 360 bits (924), Expect = 7.770e-107 Identity = 246/626 (39.30%), Postives = 317/626 (50.64%), Query Frame = 1 Query: 1 PCRVAVAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDMDFLIGEEEGKLDFVQELADIEASFKFLSPTPTRVVWHQGQAGLIPNSC--PGSTHYYGGGTAS--SXXXXXXXXXXXXXXXXXGSRYRDQVSTGGAHVSRLPQVGWTLRREETSRIRAYWRLYGSLAAYRMAVQKEGEENEDS-----NKDDGFAYDWIVATRFHVAWLRPLPPLRAFSREAVWVGASVWPISDEIALVPRAFADRYFSAVSAFHSCDSG---SWPPGEPWWQPECG----------------------------GGGG------------------------FQESVLFRHLHANNVAYRPYPMFDYHVVQPQREDG----GGERDGDNGCGAKTAAEHETACVILGAASLLPSRCVRRRDCNAALSEYAGLRCRTLTGLHS----RERVAPETFLEPEDPTAWEAALVGAPVDEERTNARAGENQGGLNMGALHDLDRIRSKLVSLRDAVWVGSKGLQMQF---------------EGTEERLNPEDLQTSGFHQSQQRRRNVEKPEPEETRYSWAINSQDSCCIEEYPGRAPHVIRSYSTEPSLMKEMALATMCIAHRLSGG 1617
PC VAV+ISGDVRSFVDP VH SF+RHVVE+IK GC VDVF YA L D+ L+ E++ + + +IEA+ +FLSPT ++VWHQ QAG+IPNSC +T GGG + S G R G HVS+ P + T R YW+LY SLAAYR+AVQ+E E+ +++ + YDWIV TRF VAW +P LRAFSR+ VW A WP+S ALVPRAF+DR+FSAV AFH+CD G SWPPGE WWQP+CG GGGG F ES+++RHLHA+ V YRPYPMF+Y+ V P DG G RD +GC A T+ ++ T CV+LG L S C ALSE++ L CR T + R+ L P AW + VG E +T+ + DL R S LV+LRDAV + + + E + L +D G H + + N +T SW+++SQ C + EYPGRAPH+IR ST+ M+E+ALAT C+AHR G
Sbjct: 37 PCAVAVSISGDVRSFVDPVVHLSFQRHVVEAIKAEGCTVDVFVYASLGDED--LLEEQDA-----ETIRNIEATMEFLSPT--QLVWHQEQAGIIPNSCRPTATTPTTGGGDEARPSSFASSNAANAKPKGGNVGGDNRSNQPRG--HVSKEPSKPPGREQFSTRSERFYWQLYESLAAYRLAVQREDEKEKEAATIPTSSPASSKYDWIVTTRFDVAWKNSVPSLRAFSRDVVWFAAKSWPMSTNFALVPRAFSDRFFSAVEAFHACDDGNGPSWPPGEAWWQPDCGEDGQENENGSGSVHSGGNLHHSPRGGPAGGGGDFDLRDWDDGSIFHDNRGGSRGEGFGESIVYRHLHASGVPYRPYPMFEYYAVPPYVRDGDVDGGAARDTRSGCEASTS-DYLTGCVLLGTVGLF-SPAYTSEACATALSEWSSLHCRASTQPEATSTGRQTERASKNLNPYL-KAWPRSSVGVSSGEAKTHRGDVFGTAEEDRVQEEDLKRAWSNLVALRDAVILAADDDSEEATHGSSNAGEDDTPIREASRRHLGKDD---GGDHDAAPKPSNSSPTR--QTNRSWSVHSQWGCRLNEYPGRAPHIIRHSSTDSHRMRELALATKCLAHRFMEG 643
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A7S1YH78_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YH78_9STRA) HSP 1 Score: 169 bits (428), Expect = 5.280e-44 Identity = 92/220 (41.82%), Postives = 128/220 (58.18%), Query Frame = 2 Query: 2846 ITHVDDFFSPKALTILLDLARGTSIFVENRV-----NYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGIEEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFGRRMQSPAAGESESD 3490
I +DD SP+AL+ + + +++F + ++ YVGAY +G+ IL Q+A E ++LPRI+ G PL W Y Y + GI +HAD A VNVN+WL PDSANL D GGL +F A+PPA+W+F ++N D+ + E L + +VP RQNRA++FDS LFH +D F+FKKGFEN R+NLT L+G A D
Sbjct: 11 IVVIDDILSPQALSRIRQILLESTVFYQTKMPLRFGGYVGAYIDDGLHDRILLQLAFELHQKLPRIM----KGHPLKYLWAYKYDSDYS-----GINIHADQAAVNVNLWLTPDSANL----DPDSGGLVIFTAKPPANWNFEKYNTDTEFVVEQLLRPTGFANVTVPHRQNRAVMFDSALFHHTDRFKFKKGFENHRINLTILYGNMQMGQAKRSPAKD 217
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: UPI00164B9922 (hypothetical protein n=1 Tax=Undibacterium hunanense TaxID=2762292 RepID=UPI00164B9922) HSP 1 Score: 174 bits (442), Expect = 1.700e-43 Identity = 101/227 (44.49%), Postives = 136/227 (59.91%), Query Frame = 2 Query: 2780 ALNPDVDWHAVEEAYLGNQPVPITHVDDFFSPKALTILLDLARGTSIFVENRV--NYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGIEEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFGRR 3454
ALN D+DW AVE+AY N P +T++D+F P+ALT L ++++ + + YVG +G P+L QIAEE +PRI G + W Y Y D E+ GI +HAD A +NVN WLAPD ANL D GGL ++ + P +W+F +N ++ I FLQE A + VP RQNRA LF+S LFH++D FRFK G+ENRR+N+T LFG R
Sbjct: 211 ALNSDIDWAAVEDAYFANAP-GMTYIDNFLKPEALTSLRRFCLESTLWFDYQYFGEYVGCTIEDGFVCPLLLQIAEEQKAAMPRIFGDHR----IHGMWGYKY---DSERT--GISIHADFAAINVNFWLAPDDANL----DPDSGGLVIWDKEAPLNWEFDDYNNNTEKITAFLQE-TGAKTFVVPHRQNRAALFNSDLFHKTDNFRFKPGYENRRINVTMLFGDR 422
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A7S1VKH0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VKH0_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.270e-43 Identity = 98/245 (40.00%), Postives = 139/245 (56.73%), Query Frame = 2 Query: 2783 LNPDVDWHAVEEAYLGNQP---VP-ITHVDDFFSPKALTILLDLARGTSIFVENRV-----NYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGIEEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFGRRMQSPAAGESESD 3490
LN D+D ++ + G + P I +DD SP+AL+ + + +++F + ++ YVGAY +G+ IL Q+A E ++LPRI+ G PL W Y Y + GI +HAD A VNVN+WL PDSANL D GGL +F A+PPA+W+F ++N D+ + E L + +VP RQNRA++FDS LFH +D F+FKKGFEN R+NLT L+G A D
Sbjct: 115 LNWDLDVDKLQRQWFGEEEGYATPGIVVIDDILSPQALSRIRQILLESTVFYQTKMPLRFGGYVGAYIDDGLHDRILLQLAFELHQKLPRIM----KGHPLKYLWAYKYDSDYS-----GINIHADQAAVNVNLWLTPDSANL----DPDSGGLVIFTAKPPANWNFEKYNTDTEFVVEQLLRPTGFANVTVPHRQNRAVMFDSALFHHTDRFKFKKGFENHRINLTILYGNMQMGQAKRSPAKD 346
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A7C7G519_9FLAO (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A7C7G519_9FLAO) HSP 1 Score: 172 bits (436), Expect = 1.070e-42 Identity = 116/321 (36.14%), Postives = 169/321 (52.65%), Query Frame = 2 Query: 2498 HQVQFYADQLEWMISERKLPPEMAFAVNRMREVRKIL--PPKVSPFVSMPGILNGWWR-RIGPFFQKGLLMPMPAPEKVVSNSPLHTWEYDEIPWMEALNPDVDWHAVEEAYLGNQPVPITHVDDFFSPKALTILLDLARGTSIFVE-NRVNYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGIEEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFG 3448
H ++ A+QL +++S+ +P N +V + P + P V +LN R RIG + K L + E EIP A+NP+ D VE Y + + +TH DDF +P+AL +L ++I+ N YVGA +G S +L QI+EE + LP I RD L+ W Y Y + GI++HAD A +NVN W+ PD ANL D GGL V+ A+ P +W+ +FN D+ I + L E ++ S +P RQNRA++F S LFH++D F FK+G+ENRR+N+T LFG
Sbjct: 137 HNLKHDAEQLRYLVSKGLIPSSYKDVANEYDKVASEIDAPDSLKPLV----VLNKDQRQRIGNTYHKFL----------------YNVETPEIPSGHAVNPNADLQVVEGRY-HEKKLGVTHFDDFLTPQALLLLNKYCLESTIWYRSNYPGYVGAMIDDGFSCGLLQQISEELCKSLPSIF-RDHK---LMYCWAYKY-----DSVLEGIRLHADNAAINVNFWITPDEANL----EPDTGGLIVYDAEAPLEWEAEKFNGDAVRIRKHLNE-CNSDSVRIPYRQNRAIIFHSNLFHETDDFHFKEGYENRRINITMLFG 422
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: A0A7S2A6T5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6T5_TRICV) HSP 1 Score: 164 bits (414), Expect = 2.950e-42 Identity = 95/218 (43.58%), Postives = 127/218 (58.26%), Query Frame = 2 Query: 2828 GNQPVPITHVDDFFSPKALTILLDLARGTSIFVENRV-----NYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPADWDFLQFNRDSSGI-EEFLQEDRHAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLFGRRMQS 3463
GN I VDD SP+AL + L ++++ + ++ Y GAY +G+ IL ++A E + LPRI+ G PL W Y Y + GI HAD A VNVN+W+ PD ANL D GGL VF A+PP+DW+F +N D+ + EE L ++A T VP R NRA+LFDSMLFH +D FRFK G+ENRR+NLT L+G +S
Sbjct: 4 GNSHPGIAVVDDILSPRALHRIRRLLLESTVWYQTKMPLRFGGYAGAYIDDGLHDRILLRLAFELNDALPRIM----EGHPLKYLWAYKY-----DSQYTGINTHADQAAVNVNLWITPDDANL----DPDSGGLVVFTAKPPSDWNFEMYNADADRVAEEILGPTKYANVT-VPYRSNRAVLFDSMLFHHTDAFRFKGGYENRRINLTILYGEMQRS 207
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Match: D7FW18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW18_ECTSI) HSP 1 Score: 171 bits (432), Expect = 5.060e-42 Identity = 116/354 (32.77%), Postives = 180/354 (50.85%), Query Frame = 2 Query: 2465 NGRSTALASTGHQVQFYADQLEWMISERKLPPEMAFAVNRMREVRKILPPKVSPFVSMPGILNGWWRRIGPFFQK---GLLMPMPAPEKVVSNSPLHTWE----------YDEIPWMEALNPDVDWHAVEEAYLGNQPVPITHVDDFFSPKALTILLDLARGTSIFVENRVNYVGAYPSEGMSHPILYQIAEEAAERLPRILGRDTPGWPLVQTWFYMYGGNDGEKCTHGIKVHADTAMVNVNVWLAPDSANLGGAQTGDGGGLTVFHAQPPAD-----------WDFLQFNRDS--SGIEEFLQEDR-HAGSTSVPVRQNRALLFDSMLFHQSDPFRFKKGFENRRLNLTFLF 3445
+ R A+ H++ +QLE+++++ +LPPE V ++ S+ G + +G + GL + NS +H + Y + ALNP++DW A+E+ YL +Q +P+ D F P+AL +LD R ++F + + Y+GAY ++G++ P L QIA E ERLP++L G L W Y + D + GI H+D A VN+N W+ PD ANL + GGL V+ PP+ D Q+N S S IE +L+++ + + +VP RQNR ++FDS L H+SD F F++G+ENRR+NLTFLF
Sbjct: 87 SARGGNFATAPHKLDHDREQLEYLVAKGRLPPEFQRLAEEYGTVGDLVE------ASLSQARKGQLKELGQGLRALTYGLGTSDFGRLRGTYNSVIHVPKGPADGDLGGGYHPTGFRRALNPNLDWRAIEDEYL-SQELPLLWFDGFLLPEALQGVLDFCREATVFFDIKPGYLGAYFNDGLTSPWLVQIAHELQERLPQVL----EGMTLSNLWAYKF---DSDTSMDGIATHSDHATVNLNFWVTPDDANLDPSS----GGLVVYPKVPPSGEDPNQPSSGGTLDMKQWNNSSRVSDIESWLKDEGVYDLAVTVPYRQNRVVVFDSRLLHRSDKFLFREGYENRRINLTFLF 422 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig104.890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.890.1 >prot_C-linearis_contig104.890.1 ID=prot_C-linearis_contig104.890.1|Name=mRNA_C-linearis_contig104.890.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=606bp PCRVAVAISGDVRSFVDPGVHRSFRRHVVESIKKNGCQVDVFAYAILKDDback to top mRNA from alignment at C-linearis_contig104:250948..262739+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig104.890.1 ID=mRNA_C-linearis_contig104.890.1|Name=mRNA_C-linearis_contig104.890.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11792bp|location=Sequence derived from alignment at C-linearis_contig104:250948..262739+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig104:250948..262739+ >mRNA_C-linearis_contig104.890.1 ID=mRNA_C-linearis_contig104.890.1|Name=mRNA_C-linearis_contig104.890.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3636bp|location=Sequence derived from alignment at C-linearis_contig104:250948..262739+ (Chordaria linearis ClinC8C monoicous)back to top |