Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 364 |
| Cds size | 363 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927381.206084-CDS-C-linearis_contig104:232442..232615 | 1622927381.206084-CDS-C-linearis_contig104:232442..232615 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 232443..232615 - |
| 1690879666.7703855-CDS-C-linearis_contig104:232442..232615 | 1690879666.7703855-CDS-C-linearis_contig104:232442..232615 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 232443..232615 - |
| 1622927381.2187045-CDS-C-linearis_contig104:233055..233245 | 1622927381.2187045-CDS-C-linearis_contig104:233055..233245 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 233056..233245 - |
| 1690879666.7827263-CDS-C-linearis_contig104:233055..233245 | 1690879666.7827263-CDS-C-linearis_contig104:233055..233245 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig104 233056..233245 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig104.887.1 >prot_C-linearis_contig104.887.1 ID=prot_C-linearis_contig104.887.1|Name=mRNA_C-linearis_contig104.887.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=121bp
GGCCCASFGAGGWRRARPCCRAARGDRAAARRKCQHEGGARRCALRCGGT
HQGGGGRDDRGVGERTGRETPQDQAAKRATPRQVSSRGGCLRGGGSERDE
ATGQASGEREEAGAGDHTVR* back to topmRNA from alignment at C-linearis_contig104:232443..233245- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig104.887.1 ID=mRNA_C-linearis_contig104.887.1|Name=mRNA_C-linearis_contig104.887.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=803bp|location=Sequence derived from alignment at C-linearis_contig104:232443..233245- (Chordaria linearis ClinC8C monoicous)
GGCGGGTGTTGCTGCGCAAGCTTCGGGGCCGGAGGATGGAGGAGAGCGAG
GCCTTGTTGTCGAGCTGCGAGAGGAGATCGCGCGGCTGCGCGTCGAAAAT
GCCAGCATGAAGGAGGAGCACGACGTTGCGCTCTACGATGTGGAGGAACG
CACCAGGGAGGAGGCGGAAGGGATGATCGAGGAGTTGGAGGTGAGGGGGG
GGGGGGGCTTCGTGACTGCAAGCGACCCCTTTCGGGTTTGGGTGAAAATT
GTGAGTGTGTGTTTGGGAGGCTGCAGTCTCGGCGGCACAAACGGGGCCAA
GTCGTCTTTACTTTCATGTGTTCTAGGTTGGCTTCGTTATGCTGGACGGG
TTTTGGAACGAGCGCAGAGATCTGGCGAGGCGTTTTCTGCAACTGTAAAT
GCACTTTTGTCAATGCCACAACACTTCGTGCACTTTATCTAGGACCAGTT
CCCTGTACCCTCCGGTTGGCCCTCTATGCAGTTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGTGTCATGTTCTCGAAACAAGACGG
ATCCCTCTCCCAGGAAGCACTCGCAAGACCGAAGCTAAAGAGCGTTTTGT
TTTGTTTTGTTTTGTTCTCCACCTTCTCAGAACGAACTGGAAGAGAAACG
CCTCAAGATCAGGCAGCTAAACGAGCAACTCCACGACAAGTCTCCAGTAG
GGGCGGGTGCTTGCGCGGCGGTGGCTCAGAGCGCGATGAAGCTACGGGCC
AAGCAAGCGGAGAGCGCGAGGAAGCTGGAGCGGGAGACCACACGGTACGC
TAA back to topCoding sequence (CDS) from alignment at C-linearis_contig104:232443..233245- >mRNA_C-linearis_contig104.887.1 ID=mRNA_C-linearis_contig104.887.1|Name=mRNA_C-linearis_contig104.887.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at C-linearis_contig104:232443..233245- (Chordaria linearis ClinC8C monoicous)
GGCGGGTGTTGCTGCGCAAGCTTCGGGGCCGGAGGATGGAGGAGAGCGAG
GCCTTGTTGTCGAGCTGCGAGAGGAGATCGCGCGGCTGCGCGTCGAAAAT
GCCAGCATGAAGGAGGAGCACGACGTTGCGCTCTACGATGTGGAGGAACG
CACCAGGGAGGAGGCGGAAGGGATGATCGAGGAGTTGGAGGGCGGGTGTT
GCTGCGCAAGCTTCGGGGCCGGAGGATGGAGGAGAGCGAGGCCTTGTTGT
CGAGCTGCGAGAGGAGATCGCGCGGCTGCGCGTCGAAAATGCCAGCATGA
AGGAGGAGCACGACGTTGCGCTCTACGATGTGGAGGAACGCACCAGGGAG
GAGGCGGAAGGGATGATCGAGGAGTTGGAGAACGAACTGGAAGAGAAACG
CCTCAAGATCAGGCAGCTAAACGAGCAACTCCACGACAAGTCTCCAGTAG
GGGCGGGTGCTTGCGCGGCGGTGGCTCAGAGCGCGATGAAGCTACGGGCC
AAGCAAGCGGAGAGCGCGAGGAAGCTGGAGCGGGAGACCACACGGTACGC
TAAAACGAACTGGAAGAGAAACGCCTCAAGATCAGGCAGCTAAACGAGCA
ACTCCACGACAAGTCTCCAGTAGGGGCGGGTGCTTGCGCGGCGGTGGCTC
AGAGCGCGATGAAGCTACGGGCCAAGCAAGCGGAGAGCGCGAGGAAGCTG
GAGCGGGAGACCACACGGTACGCTAA back to top
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