mRNA_C-linearis_contig104.881.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig104.881.1

>prot_C-linearis_contig104.881.1 ID=prot_C-linearis_contig104.881.1|Name=mRNA_C-linearis_contig104.881.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=370bp
MERIQTVEIIDPELSNKPKNRPYYQQNLKSWYPLLTPWRAVAGYLLIGLI
FVPLGAVLWNDSDVVEYKYQYDGAGSDGDGCRISTYNENLLCNITFNVKN
DIPAPAYVYYELTNFYQNSKLYTDSIDQDQVLGSTSTSGIDDCSPLTYNG
TLVLHPCGLIANTLFNDIFTVVSGQAMLETDIAWDSDVADKFVQPDGFVT
AACEDEDACVTCLADANLVDSDGGTTFAGCGVYDSTAYYYPNEDTTQYLY
ETFPEVISPLVGVKDEHFAVWMRTSGRADFRKLYGRIEAGLSAGDTLTFE
VNNNFIVNYYDGTKSIVVSNTNDLGGRNLYWGQSLPTIGGIVLVLALLFG
VKELVWPRTMGDITKLLDT*
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mRNA from alignment at C-linearis_contig104:185140..191164-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig104.881.1 ID=mRNA_C-linearis_contig104.881.1|Name=mRNA_C-linearis_contig104.881.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6025bp|location=Sequence derived from alignment at C-linearis_contig104:185140..191164- (Chordaria linearis ClinC8C monoicous)
GGACAGAGCTCGAGATTGCCTACAGCAGCGTGAGAGAAAGGAAGCACTCA CGAGGAAAAAGCACGCGCAAGGAAACCCTATTCCAGTAACGGTACCCTGA AAGCTTGCCGCACTTTGCCCCAGCCGTGAGCCCTTGGACGAACCAAGAAG CCATTCTTCACCCGCAGGACCCTTTTGGGCGCGACAGCAGCATCTCCCGG AGACGTTGATCACGCTTGAGGGAGCACTCGTGTTTCGGCGGTGGCTACCC GAAGCAGCAAACGTGGCGAAGGAAGAGGAAGACCTGCGCGAGGTCGGTGT CGGCGCTCGCTACAGGCCACTGAGCAACTCTCCACGCGAGCAGAACACCG GCAGCACGATTCAGGTTTCGCCCGAGATACAGATGGAGCGAATACAAACG GTGGAGATAATCGACCCAGAGCTCAGCAACAAGCCAAAGAATAGGCCGTA CTACCAGCAGAACCTCAAGTCGTGGTACCCGCTGCTGACGCCGTGGAGGG CCGTGGCAGGTTACCTGCTGATTGGCTTGATATTCGTACCGCTTGGTGCG GTGCTGTGGAACGACTCGGACGTCGTTGAATACAAGTGAGGAGGGAGAGC CGGCTCTGTGTGTCTGCTGGTCTCCTTGCTCATGGCTGTGCAGCATAGCC GCGCTCAGTGTTGTTGTTTTCAGATCGTGCCATATGCGTCCACCAGGCTC CATTCTCGCGCTTTCGCGTAGACATGCATGCTCCCGTAGGACTACATGGT CTACTGCGGTAGCCTGAGCTTGGTGAACCCTAACCCTTGTTTACGAGTGT CTCCGCAATCCCCGACCTGACTTATGCATGTACAAACAGCGGCACACCGT AGCAGTATTTCCCACTCCGCAGAACGGTTGGTAGAGGGTTTTCTTTGAGC GGGTTTGGTTCTGTGTGTGCTTGTGTGTGTATTGCTCCTGGTGTATGATG CTGTATCGTAAGCCCATCACCCCCGCGACCGTTACAGCAGCAGTGCCAGC ACGAGAAGCAATCCGGCGCGGGGCGCTCCTGAACCAAACCATTGAATCGG TAACAGGGAAGAGCAATCCTTGACATTGAAGGGTGGTGCTGTATGAGTTT GTTGCCGGTTCGAGCTTTTGGTTGCTGCGGTGTGTGCGGTGCGGTATGGG CATGTGACGTAAGGCATCACACACCCGATCCGTGTTTCATCGCCCGTTTC GCCCCCCAACGAACGCACGGGCTGTCTTGACACGGACAGATCGTATTGTT GGGGAGATCCCATCGAGACGCTTCGTTTGTATTCCGGCGGCATTCGCACT CTCCCTGTTTTCGAACATCTGCTAACGTGTCATGCGACCCTTCACCTCTG TTGCCATGGTTCATGGTGCCGCAATCAGGTACCAGTACGACGGTGCCGGC TCGGACGGAGACGGCTGCAGGATCAGCACCTACAACGAGAACTTGCTTTG CAACATCACCTTCAACGTAAAGAATGACATCCCGGCCCCGGCGTACGTCT ACTACGAGCTCACCAACTTCTACCAGAACTCCAAGTTGTGAGTTTTCTTC TCTCTAGCGTGTGGAGATCACCCTACAGAAGCTGTCACGTACCAGTAGGT AGTACGAGGCCCCCGAGTGTCACGTGTAAGCATGGATGTACCGGTAGCGA AAGCGAGGATAGGGAAGGATAGCAGGGAAGGGAGTCAAGGGCCTACGGGC AAAAGGGTGGCGGGGTACAGCCGCTTCAAGCGTCAAATCACAAATCGCTG TTGTACGTGCGTGCAAAACCCGCCTCGACCGGCATTGCGCAATCGAGCGG TATTCCTCCCCCAAAACTTACTTCCCCGCGGAGTTGTTTCTTTCGGCAGG TATGTACAGCAGTACGCATGCGGTATTTTTTTTCCTTCTTTTTCGCCGTC AAATGTGCTTGGTCGGTGCGGCAAGGTACGTGTGTGTTCGTTGATCGGTG TTGCTTCTCCGGTCTCATCTTGCTCGGCGGTTGCCTGCTGAACCGTCCGT TCCTTCCACGCACCCCACCACGAACCAGGTACACGGACTCGATTGACCAA GATCAGGTGCTGGGTTCGACGTCCACCTCCGGCATAGACGACTGCTCGCC TCTCACCTACAACGGGACCTTGGTGCTGCACCCGTGCGGCCTGATCGCGA ACACCCTCTTCAACGACATCTTCACGGTCGTGTCCGGCCAAGCTATGCTT GAGACCGACATCGCCTGGGATTCGGACGTAGCAGACAAGGTAGGCTTCCT TGTTTCTGGGTGAAAGCATGAACAAGTGCTCACTGCTCCACGAATGTCCG TGCCTGGGGTCAGGGTTTTCTCGGGGATTTGTCTCAGGCGCCAGGTTTTC GCACGAACGCCGGGGTAGGGGGTTGCTTTTTTTTTTTCGCCTTGGTGCCT TCCCCCAATATGACTTTGATTCCGAAGCGAGACACGCGCTCAGGGTTGTG TTTCGGATACAGCTTTGTGGCATGGCGTTGATTGAAATTATGGTACAATC ATGGTGCACACAAAATATCATCACACAACGAAGCCACGTCCAAGATGGTT GATAGGCTAGCAAAGCAAGGCACATCAAAGCACAGATTCAGAAGAACACA GTACTTTAGCACGTTGTTTGGCCGCGTTTTTCGTCGAACCCTTGCATCTG CCGTGCCATCTCGTGGATGCCCCCCCCCTCCGGCTGTTGACATGACCTCG TCCGTCTATGCTTCAGGCGCACCGACTAACCATGATGTTTTCACGCCCCG GAACCGTGTTTTTTCATCCTTGCAACCCCTCTGTCTCTGTTTCTGCCCAT GCTACACAGTTCGTGCAGCCGGATGGCTTCGTGACGGCTGCTTGTGAAGA CGAAGACGCCTGCGTGACCTGCCTGGCAGACGCAAAGTGAGCGCTTGTAG CCGTGCATGTTTACACGTGCAGCTTTGTTGTGCGATTTTTTAGTATCTCG CCTGTGCCCTCGACCTACATGGCCATCCCTACCGACTTTCACCCCGGCTG AACACCACCTCGGGATGGAGGACTCGCCTGTGGAGTACCTCGCCTGTGTT GCCCTCCCAAACGACGATATGTGCGGGTGAGTCCAGTTGTGTGGCACCCC GCCATACTCCGTTGGGCGGATGTTGGCGACGTTTCTGAGCTGTCCGTCTG TTCCGGTGTAAGCTCTCGGTGGGGTGGCCGTTGGCTTTGCGTTGCGCTTA TTCGCTGTATTTATCTATTTCCAATCAGCGGTGATTTTTTTTCAAGTTGT TCACACGTACAGCTACACCGATGACGTCATGCTATCACATGTCGACGGGT GGGTGATTTTCTAACGGCGTGTCTGTGGCCTTCTTGTCCTGAACTGCTCG ATTCACCATCACCACCACCACCACCACCACCATCATCATTATCATCGTCA TGATGATAAGCTTGGTCGACAGCGATGGTGGCACCACGTTCGCGGGCTGC GGTGTATATGACTCAACCGCCTACTACTACCCAAACGAAGACACCACGCA GTACCTGTACGAGACTTTCCCGGAGGTGAGACGACCAACGAGTGCGATTG CGTGGCGACGATCAGATCAGTGCCCCGGTAACTTTGGGTTCTGCCAACGT ACGCAAATAGTGTTTGCATAGCTGCGACGGCCGTAGTCTCCCAGTTTGAC GAAAACAGCGTTAAAAAGGCGATGTTCCTTCGGCTTGACAGCCGCGCATT GCATTTCGCCGTTCAATTCAACCCATGATCGTATGTATGCTTTCGGTACA TACAGTGCCGCCGTCTTCCGCGTCTCTTTCATTGCTTTGTTTTCGACGTA TCATGCGTCCTGCTGTAGGTTATCAGCCCTCTTGTCGGCGTCAAAGACGA GCACTTTGCCGTCTGGATGCGCACTTCGGGGCGTGCCGACTTCCGGAAGC TGTATGGCAGGTATGTATGCATCATATGTGTGGGTAAATGGATGGACGGT GGAGTGAAGAAGGACTTGGTGTACCTCAAACGTAGCACTACTGCTGTACG CGGTATCTCTGTTTCCCTGTCCAGGTAGTGTGGTGCTGTGATCATGTGCG GTTGGCTATTTTAGCTTTCCTGGGGCCGATTCCTTTCGCTGAGATCCGTG CATTGCGGTGCGGTGTTGTCTTTGCAAGCGGGCCGTCGGCAATGGCTTGT TGATTATTCGTTTTTATTGGTGGTGGAGGTGGTCGTGGTCGTGGTCGCGT TTGGTGCGTTCTGATTGCAGGTAGGGTGGCCGAACCTCATCTCAGGTTGC TGTTTTTCTCGCCGGCGCGAAGGAGGCGGATTGGGTATAGAATCGTGTTT GAAACGGGCTGCGTTGGAGCGTTTGTGGGTGACATGCTACAGTACGGCAC AGCCAGTATTGATGGATACCGTCGTGTGTTTTTTTTCTCCTATTTATTTT TATTTTTTGCAGAATCGAAGCCGGTCTGTCTGCGGGCGACACGTTGACCT TCGAGGTGAACAACAACTTCATTGTCAACTACTACGACGGTACCAAGTCC ATCGTCGTCTCCAACACCAACGATCTAGGCGGCCGCAACCTCTACTGGGG GCAGTCGCTGCCGACGATCGGAGGCATAGTGTTAGTCCTGGCTCTGCTTT TCGGGGTGAGTTCACGATGTGGTGGTTTTGTGCTTCGAGCATGATGCTTT AGATTTTCCACCCTGAATTGATTCGTTCCATTGGGATCGAACAACGAAAT GACATCCTCACCACCCTCGTATTTCTCACAAATGGTGCGCAGCACTGCTT ATTTTTGTTCACGTAAGGGAGCGAAGTAGTCAAGCCCCCTTTTCGTATCG CACTGCGTTGCATTGCCATGCACTGCATGGCGTTGTGTTGGATGCGCTGG ATAGTGCCGGATGCCTGACGAGAGCCGTTGCGGAGCCCTGTAGACTCTAT TTTATGAGACGTGGGGCCCTTTCGTTTTGATGCTGACTCCTTCTACCAGT GCCGGTGCTAAATGCTGTTGAGCGTGTTTGATTTTTCACCCTTCCCGCAT CGTGGGTGTGTAGATGGTACGTAGAAATGTGGGGCATCGGAGGGCTGAGC TAGTTCCAGAACGGGTTGAGAACTCAACCAGGAGTTTGATTCCGTGCTTT GAGAGGCATGCGTGTGGGCTGCATTAAACGCGTTGCTCGTGTATAATCCA TTTATTTTTGTTCCCTATCGGCTCGACATCCCTCTCCCGCTCTGCAGGTG AAGGAGTTGGTTTGGCCACGAACAATGGGCGACATCACCAAGCTCTTGGA TACCTAAAATCTAGGCAGAAGGGGGGGGGGTGGTTTTTGGGGGCTTCAGT CATGCTTTGATGCAAGCAAGACAGAAAGGCCCGCGGATGGCCTTGTCGTG AAATTCGTGCGCGGCGGTAGGCCTGATTTCAGTTTTTTTTACAGCAGTGC AGCCCCCTCGGTCGGACAAGAAAGTGCCTCGGGGAGGTGTCCATGAACGT CGGCTTTTTGGGTGTTACGGGTGTTTAGGTGACCCCCTTTGAGTTTCTCA AGGGCGATGTTGGGTGTGTTCTTTTCTTCATGCTTCTTATTAGCACGTTG TTGTGATTGTATGTAGCCCCAAAACAAAGGTTTGATCTATCGTCCGTGAT TTTCAGGCTCAGGGCGATGGCCGGTCTTCCGGCTTTTTACATTCAAGCGA GGCGGGGTGGTGGTTGGCGGCTAAGCGATATAGTCTATTGCTCTCCCGCC GGCGAGAGGTCGATCCGTGACAAAATCAACGAACAATAGGCATCTCGACC TGTGCAACCTATGAAGAGTATCTGCCCTGTGGGATGGCAGAGCTCGGTTA TGCATGCATGCATGGATGTCAGCAAAATCTTGTTTCGTCAGCAAACGGTG GTGGAGCGGTTTCGGGTCGGTGAGTCGTGGGAGAACAAGTCGGAGTGTTT TTCTGCTGCACGGGGGCTTGTCCTGCTGCTTGTTTTAGTCCTTATGGTTG CGACGCGGTATCGACTGCAGCATAAAAACAACTGTCAAGATGTGTCCGCC AGGCTTCGGTAAGGCCTCTCTTATC
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Coding sequence (CDS) from alignment at C-linearis_contig104:185140..191164-

>mRNA_C-linearis_contig104.881.1 ID=mRNA_C-linearis_contig104.881.1|Name=mRNA_C-linearis_contig104.881.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at C-linearis_contig104:185140..191164- (Chordaria linearis ClinC8C monoicous)
ATGGAGCGAATACAAACGGTGGAGATAATCGACCCAGAGCTCAGCAACAA
GCCAAAGAATAGGCCGTACTACCAGCAGAACCTCAAGTCGTGGTACCCGC
TGCTGACGCCGTGGAGGGCCGTGGCAGGTTACCTGCTGATTGGCTTGATA
TTCGTACCGCTTGGTGCGGTGCTGTGGAACGACTCGGACGTCGTTGAATA
CAAATGGAGCGAATACAAACGGTGGAGATAATCGACCCAGAGCTCAGCAA
CAAGCCAAAGAATAGGCCGTACTACCAGCAGAACCTCAAGTCGTGGTACC
CGCTGCTGACGCCGTGGAGGGCCGTGGCAGGTTACCTGCTGATTGGCTTG
ATATTCGTACCGCTTGGTGCGGTGCTGTGGAACGACTCGGACGTCGTTGA
ATACAAGTACCAGTACGACGGTGCCGGCTCGGACGGAGACGGCTGCAGGA
TCAGCACCTACAACGAGAACTTGCTTTGCAACATCACCTTCAACGTAAAG
AATGACATCCCGGCCCCGGCGTACGTCTACTACGAGCTCACCAACTTCTA
CCAGAACTCCAAGTTGTACCAGTACGACGGTGCCGGCTCGGACGGAGACG
GCTGCAGGATCAGCACCTACAACGAGAACTTGCTTTGCAACATCACCTTC
AACGTAAAGAATGACATCCCGGCCCCGGCGTACGTCTACTACGAGCTCAC
CAACTTCTACCAGAACTCCAAGTTGTACACGGACTCGATTGACCAAGATC
AGGTGCTGGGTTCGACGTCCACCTCCGGCATAGACGACTGCTCGCCTCTC
ACCTACAACGGGACCTTGGTGCTGCACCCGTGCGGCCTGATCGCGAACAC
CCTCTTCAACGACATCTTCACGGTCGTGTCCGGCCAAGCTATGCTTGAGA
CCGACATCGCCTGGGATTCGGACGTAGCAGACAAGGTACACGGACTCGAT
TGACCAAGATCAGGTGCTGGGTTCGACGTCCACCTCCGGCATAGACGACT
GCTCGCCTCTCACCTACAACGGGACCTTGGTGCTGCACCCGTGCGGCCTG
ATCGCGAACACCCTCTTCAACGACATCTTCACGGTCGTGTCCGGCCAAGC
TATGCTTGAGACCGACATCGCCTGGGATTCGGACGTAGCAGACAAGTTCG
TGCAGCCGGATGGCTTCGTGACGGCTGCTTGTGAAGACGAAGACGCCTGC
GTGACCTGCCTGGCAGACGCAAATTCGTGCAGCCGGATGGCTTCGTGACG
GCTGCTTGTGAAGACGAAGACGCCTGCGTGACCTGCCTGGCAGACGCAAA
CTTGGTCGACAGCGATGGTGGCACCACGTTCGCGGGCTGCGGTGTATATG
ACTCAACCGCCTACTACTACCCAAACGAAGACACCACGCAGTACCTGTAC
GAGACTTTCCCGGAGCTTGGTCGACAGCGATGGTGGCACCACGTTCGCGG
GCTGCGGTGTATATGACTCAACCGCCTACTACTACCCAAACGAAGACACC
ACGCAGTACCTGTACGAGACTTTCCCGGAGGTTATCAGCCCTCTTGTCGG
CGTCAAAGACGAGCACTTTGCCGTCTGGATGCGCACTTCGGGGCGTGCCG
ACTTCCGGAAGCTGTATGGCAGGTTATCAGCCCTCTTGTCGGCGTCAAAG
ACGAGCACTTTGCCGTCTGGATGCGCACTTCGGGGCGTGCCGACTTCCGG
AAGCTGTATGGCAGAATCGAAGCCGGTCTGTCTGCGGGCGACACGTTGAC
CTTCGAGGTGAACAACAACTTCATTGTCAACTACTACGACGGTACCAAGT
CCATCGTCGTCTCCAACACCAACGATCTAGGCGGCCGCAACCTCTACTGG
GGGCAGTCGCTGCCGACGATCGGAGGCATAGTGTTAGTCCTGGCTCTGCT
TTTCGGGAATCGAAGCCGGTCTGTCTGCGGGCGACACGTTGACCTTCGAG
GTGAACAACAACTTCATTGTCAACTACTACGACGGTACCAAGTCCATCGT
CGTCTCCAACACCAACGATCTAGGCGGCCGCAACCTCTACTGGGGGCAGT
CGCTGCCGACGATCGGAGGCATAGTGTTAGTCCTGGCTCTGCTTTTCGGG
GTGAAGGAGTTGGTTTGGCCACGAACAATGGGCGACATCACCAAGCTCTT
GGATACCTAAGTGAAGGAGTTGGTTTGGCCACGAACAATGGGCGACATCA
CCAAGCTCTTGGATACCTAA
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