mRNA_C-linearis_contig104.863.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig104.863.1

>prot_C-linearis_contig104.863.1 ID=prot_C-linearis_contig104.863.1|Name=mRNA_C-linearis_contig104.863.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=868bp
MARKEGLSRRNGKAPTLARFRPKDEYVSTFDMLHDSTRNHAYSVAVRLQA
DKPSAEDGSNQSGSAPAPLRWLDIGTGSGLLASLVAAAPPSMTTSVEVYA
CEDVAEVADVAGETFAKNGGHIRLFRGRSTEMEVGRDLPARVPRVISELL
GTGLLEEGILPTLRDAQARLLSPAYVSIPDSAEVWAFCCESSEFHNMSRI
LPQAAGCSGKGFLAPSSDKWESCPGAASPASVRARFRPLSPSVRIFNFDF
SSHGDPLPGPQGRKRGVRFPIDGSGGGTVHAVVCWWRCFMDKGRTITMST
SPLDKDAPPEECTPPEEQAAPDAAPPSRDHWRQSVYLLSRPLKARAGDAV
RALARHDDTAVWFRAVELETQSAGSDQDAVAVAASCEAPAMEGPQRTMKR
AATAPTRREPGEGVHLLTGEEVARVLKDGPVVPPVCVCGLHRTCPPSRIW
MLNDHSRTASFRSVIRSILAGGDASHHVANGPENQQHDNTASTSATVAAA
GIKRRRTTPAPACVACISDGFLLPLLAAQAGASEVLEIQPSAAYAAVCRD
LYHANGIDVEIDGDGDGDGDGDNDPDRQRIIRPFPGGVSSVYELLMPSPG
SAAPDNNGFGLAGIWKLDAVIGEPFFADLSTATWPLEPLLLFWCARTALE
TGGCFSPRTRVVPARARLLACPFACGLLFRGRRPVEKVEGVDMSAVNQRL
GVGCAMVEPDSGPENGGEDGGEDVKENKRLGGVESVRLSEYGHDLLGPQT
VVLDMDLTQPLCDLRGGRKEIRCRVRQPPSATEPGATEPAPQPRGQEGGE
AVCQGVALWLDIWLDEEGLHRLSTGPEVPYWLQGVLFFEEGWVVPPCGGS
FHLEAALEDGALSVDVS*
back to top

mRNA from alignment at C-linearis_contig104:51573..55425+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig104.863.1 ID=mRNA_C-linearis_contig104.863.1|Name=mRNA_C-linearis_contig104.863.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3853bp|location=Sequence derived from alignment at C-linearis_contig104:51573..55425+ (Chordaria linearis ClinC8C monoicous)
TACTGTAGCGCTCTTCATTCATTTATTTCCACGCTTGTGCGCTCGGCTCA CGTCGCTGCGCCTGACTGAGCTGGCTATGCTCTAGGGGGGCATTTTCTTT CTTTTTCATCTTGCCGCTGGGCGTCGTGCGTTTGACAGGGGGAGAAGCGA CCAACTAGACGCCGCAGGCGAAACAGCAGGCTGACATAGGGAGCGGTCGA GGTGTTGGCGAGGTTGCAGCATGGCGAGGAAGGAGGGTCTTAGCAGGAGG AATGGGAAAGCACCGACGCTAGCCAGGTTTCGGCCCAAGGATGAGTATGT GAGTAGCACCCCATCAAGAGGTACCCAAATCTCGCCCCACGCCCGACGTC CACACAGCAGTGGTACAGCAGAAGAGCCCGCCCCTTGAATACTAAGTAGT CTTAGTCGACTACGTAGTCTATACCTCCACGCGTTCTGATACCCATCTTT GGCAGACGATATCATCAATATAAGGCACACATAAAGACAGGTATCATCGA TGTGATGCCTACATCAATTTGGTGGCCAGGACTTACTTGATGTTGTAGGC CGCTCCCGTGGCACCCACGCAAACAGCAATTGCCCCCCACTGTTTCCTCT CCCCCACCCGCCTCGGGTTCTCCGCCAGGTCTCAACCTTCGACATGCTAC ACGACAGCACCAGGAACCACGGTACGCACAGAAATAACGTTGCGTTTGAT TGTATGTGTCTCAGAGCAGTAGTCCAGACTATATCGGAGGGGGCATTTGT TTATGTGGACAGTAGTAGTGCTGGTAGTTTGCCAAGCCAACATTGCCCCC TGTGTTGGATCTCCTTCGCCACGTTGTCCATTCCATGGGCCCGTCGATAG CTTAGGTTTGGGTTGCATGCACCACATCAGCAAAGTGGAAGATATTCCAG GATCGTGCCAGTTGGTTCAGGGTTCCAAAATATGCTCAAGATTTCCAAAA AAACGGGCTGCTGTATTTCTGCAACTTACACAAAACAAGCTCGTTTCGGT CCGTCTGTCCTCCATTACCCAGCGTACAGTGTGGCTGTTCGCCTTCAAGC CGACAAGCCCAGTGCCGAAGATGGAAGCAACCAAAGCGGCAGCGCGCCAG CGCCCCTCCGATGGCTCGACATCGGCACGGGGAGCGGCCTCCTGGCCAGC CTTGTAGCAGCAGCACCGCCTTCGTCTCCTGCGTCACAAGGAGTAGCGCC CACATCATCATCGACACCTACCGCTACGAGAATGACAACGTCAGTCGAGG TGTACGCGTGTGAGGATGTGGCAGAGGTGGCCGACGTCGCTGGCGAGACC TTTGCCAAGAACGGAGGACACATTCGTCTGTTTCGCGGACGTTCGACGGA AATGGAGGTCGGCAGAGACCTTCCTGCACGAGTCCCGCGTGTCATCTCGG AGTTGCTGGGAACAGGTCAGTCGGTTGGGCGATTCTGTATTCTCCTGCAA CCCCCCGTTGCCAGTCTTCGTGCGTTTCCCTGAAGGCTGAGTTCCACTAT GTGTTATACTTCGAAGTACCAATGATGCGTTGCCAAAACGGATCCCTCGG TTGAAACCATCCTGCCCACCTTCGTGCCAAAACCCGACCAAACGAACGAA ACGCCAGGCCTGTTAGAAGAGGGGATCCTCCCAACCCTGCGAGACGCTCA GGCCCGTCTACTCTCGCCAGCTTACGTCTCCATCCCAGACTCGGCAGAGG TGTGGGCTTTCTGCTGCGAGAGCTCGGAGTTTCACAACATGAGCCGTATT CTGCCTCAAGCAGCGGGATGCAGCGGTAAGGGCTTCCTCGCGCCGTCCTC GGACAAGTGGGAGAGTTGCCCCGGGGCAGCATCACCGGCGTCCGTGCGCG CGAGGTTTCGTCCCCTCTCCCCTTCCGTCAGAATTTTCAACTTCGATTTT TCTTCGCACGGCGACCCGCTACCGGGGCCGCAGGGGCGAAAGCGGGGAGT TCGATTCCCGATCGACGGCAGCGGCGGCGGCACGGTCCACGCCGTCGTTT GCTGGTGGCGGTGCTTCATGGACAAAGGTCGGACAATTACGATGAGTACA TCCCCGCTGGACAAAGATGCACCACCAGAGGAATGTACACCGCCGGAGGA GCAAGCTGCGCCTGACGCCGCGCCACCCTCCAGAGATCACTGGCGACAGT CGGTGTACTTGCTTAGCAGGCCGCTCAAAGCGCGAGCGGGGGACGCCGTG CGCGCCCTTGCTCGCCACGACGACACCGCCGTTTGGTTCCGTGCTGTAGA GCTCGAAACACAATCGGCCGGTTCGGACCAGGACGCTGTTGCTGTGGCTG CCTCCTGCGAGGCACCCGCGATGGAAGGACCCCAACGCACCATGAAAAGG GTGGCTAACACGGCAATAACAGCATCGTTACTACAGGCATCAGTAGGGCC TGCGTCGGCGGCATCCGAAGATATTGCGGAGCCTGATCCTGAGGACGAGG CGGCCACTGCGCCGACGCGACGAGAGCCGGGCGAAGGGGTGCACCTCTTG ACAGGGGAAGAAGTTGCTCGAGTGCTGAAGGATGGCCCCGTTGTCCCGCC GGTCTGCGTGTGCGGCTTGCACCGCACGTGCCCGCCGTCGCGTATCTGGA TGCTGAACGACCACAGCCGAACAGCCTCGTTCCGGTCGGTTATTCGTTCC ATTCTCGCGGGCGGCGACGCTAGCCACCACGTTGCCAACGGACCCGAGAA TCAACAGCACGACAACACGGCGAGTACCTCTGCCACGGTCGCCGCCGCCG GGATCAAGAGGAGGCGGACCACACCAGCACCAGCATGCGTTGCGTGCATC TCAGACGGGTTCCTGCTTCCCCTCCTGGCAGCCCAAGCGGGCGCGTCAGA GGTTCTCGAGATCCAACCCTCAGCCGCTTACGCGGCGGTTTGCCGAGACT TATACCACGCGAACGGGATCGACGTCGAAATCGACGGCGACGGCGACGGC GACGGCGACGGCGACAACGACCCGGACCGACAAAGGATTATTCGGCCTTT CCCCGGCGGCGTTTCAAGCGTGTATGAGCTGCTGATGCCGTCGCCGGGGT CGGCCGCCCCGGACAACAACGGTTTCGGCTTGGCGGGAATATGGAAGCTC GACGCCGTCATTGGGGAGCCTTTCTTCGCCGACCTGTCGACAGCTACCTG GCCGCTCGAACCCCTGCTGCTGTTCTGGTGCGCGCGCACGGCTCTGGAGA CCGGGGGGTGCTTTTCCCCGAGGACGAGAGTGGTGCCTGCTCGAGCACGG CTTCTGGCCTGCCCCTTCGCTTGTGGCCTGCTCTTTCGGGGCCGGCGTCC GGTAGAGAAGGTGGAGGGGGTCGACATGTCGGCGGTGAACCAACGCCTTG GTGTTGGCTGTGCCATGGTGGAGCCTGATAGTGGACCGGAGAATGGAGGC GAAGATGGCGGTGAGGACGTGAAAGAAAACAAAAGACTTGGAGGTGTCGA GTCCGTGCGACTGTCCGAGTACGGGCACGACCTACTCGGCCCCCAGACCG TTGTGTTGGACATGGACCTCACCCAACCGCTGTGCGATTTGCGCGGCGGC CGCAAGGAAATCCGGTGCCGTGTTCGGCAGCCACCCTCCGCAACCGAACC TGGAGCAACAGAACCAGCACCCCAGCCGCGAGGGCAGGAGGGAGGGGAAG CTGTGTGCCAGGGTGTGGCCCTGTGGCTGGACATCTGGCTGGATGAGGAA GGATTGCATCGCCTTTCTACCGGGCCGGAAGTGCCCTACTGGTTGCAGGG CGTGCTTTTCTTCGAGGAGGGATGGGTTGTGCCGCCGTGCGGTGGGAGCT TCCACCTGGAAGCTGCGTTGGAAGATGGCGCCCTCAGCGTAGATGTGTCG TAG
back to top

Coding sequence (CDS) from alignment at C-linearis_contig104:51573..55425+

>mRNA_C-linearis_contig104.863.1 ID=mRNA_C-linearis_contig104.863.1|Name=mRNA_C-linearis_contig104.863.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5208bp|location=Sequence derived from alignment at C-linearis_contig104:51573..55425+ (Chordaria linearis ClinC8C monoicous)
ATGGCGAGGAAGGAGGGTCTTAGCAGGAGGAATGGGAAAGCACCGACGCT
AGCCAGGTTTCGGCCCAAGGATGAGTATATGGCGAGGAAGGAGGGTCTTA
GCAGGAGGAATGGGAAAGCACCGACGCTAGCCAGGTTTCGGCCCAAGGAT
GAGTATGTCTCAACCTTCGACATGCTACACGACAGCACCAGGAACCACGG
TCTCAACCTTCGACATGCTACACGACAGCACCAGGAACCACGCGTACAGT
GTGGCTGTTCGCCTTCAAGCCGACAAGCCCAGTGCCGAAGATGGAAGCAA
CCAAAGCGGCAGCGCGCCAGCGCCCCTCCGATGGCTCGACATCGGCACGG
GGAGCGGCCTCCTGGCCAGCCTTGTAGCAGCAGCACCGCCTTCCGTACAG
TGTGGCTGTTCGCCTTCAAGCCGACAAGCCCAGTGCCGAAGATGGAAGCA
ACCAAAGCGGCAGCGCGCCAGCGCCCCTCCGATGGCTCGACATCGGCACG
GGGAGCGGCCTCCTGGCCAGCCTTGTAGCAGCAGCACCGCCTTCAATGAC
AACGTCAGTCGAGGTGTACGCGTGTGAGGATGTGGCAGAGGTGGCCGACG
TCGCTGGCGAGACCTTTGCCAAGAACGGAGGACACATTCGTCTGTTTCGC
GGACGTTCGACGGAAATGGAGGTCGGCAGAGACCTTCCTGCACGAGTCCC
GCGTGTCATCTCGGAGTTGCTGGGAACAGAATGACAACGTCAGTCGAGGT
GTACGCGTGTGAGGATGTGGCAGAGGTGGCCGACGTCGCTGGCGAGACCT
TTGCCAAGAACGGAGGACACATTCGTCTGTTTCGCGGACGTTCGACGGAA
ATGGAGGTCGGCAGAGACCTTCCTGCACGAGTCCCGCGTGTCATCTCGGA
GTTGCTGGGAACAGGCCTGTTAGAAGAGGGGATCCTCCCAACCCTGCGAG
ACGCTCAGGCCCGTCTACTCTCGCCAGCTTACGTCTCCATCCCAGACTCG
GCAGAGGTGTGGGCTTTCTGCTGCGAGAGCTCGGAGTTTCACAACATGAG
CCGTATTCTGCCTCAAGCAGCGGGATGCAGCGGTAAGGGCTTCCTCGCGC
CGTCCTCGGACAAGTGGGAGAGTTGCCCCGGGGCAGCATCACCGGCGTCC
GTGCGCGCGAGGTTTCGTCCCCTCTCCCCTTCCGTCAGAATTTTCAACTT
CGATTTTTCTTCGCACGGCGACCCGCTACCGGGGCCGCAGGGGCGAAAGC
GGGGAGTTCGATTCCCGATCGACGGCAGCGGCGGCGGCACGGTCCACGCC
GTCGTTTGCTGGTGGCGGTGCTTCATGGACAAAGGTCGGACAATTACGAT
GAGTACATCCCCGCTGGACAAAGATGCACCACCAGAGGAATGTACACCGC
CGGAGGAGCAAGCTGCGCCTGACGCCGCGCCACCCTCCAGAGATCACTGG
CGACAGTCGGTGTACTTGCTTAGCAGGCCGCTCAAAGCGCGAGCGGGGGA
CGCCGTGCGCGCCCTTGCTCGCCACGACGACACCGCCGTTTGGTTCCGTG
CTGTAGAGCTCGAAACACAATCGGCCGGTTCGGACCAGGACGCTGTTGCT
GTGGCTGCCTCCTGCGAGGCACCCGCGATGGAAGGACCCCAACGCACCAT
GAAAAGGGCCTGTTAGAAGAGGGGATCCTCCCAACCCTGCGAGACGCTCA
GGCCCGTCTACTCTCGCCAGCTTACGTCTCCATCCCAGACTCGGCAGAGG
TGTGGGCTTTCTGCTGCGAGAGCTCGGAGTTTCACAACATGAGCCGTATT
CTGCCTCAAGCAGCGGGATGCAGCGGTAAGGGCTTCCTCGCGCCGTCCTC
GGACAAGTGGGAGAGTTGCCCCGGGGCAGCATCACCGGCGTCCGTGCGCG
CGAGGTTTCGTCCCCTCTCCCCTTCCGTCAGAATTTTCAACTTCGATTTT
TCTTCGCACGGCGACCCGCTACCGGGGCCGCAGGGGCGAAAGCGGGGAGT
TCGATTCCCGATCGACGGCAGCGGCGGCGGCACGGTCCACGCCGTCGTTT
GCTGGTGGCGGTGCTTCATGGACAAAGGTCGGACAATTACGATGAGTACA
TCCCCGCTGGACAAAGATGCACCACCAGAGGAATGTACACCGCCGGAGGA
GCAAGCTGCGCCTGACGCCGCGCCACCCTCCAGAGATCACTGGCGACAGT
CGGTGTACTTGCTTAGCAGGCCGCTCAAAGCGCGAGCGGGGGACGCCGTG
CGCGCCCTTGCTCGCCACGACGACACCGCCGTTTGGTTCCGTGCTGTAGA
GCTCGAAACACAATCGGCCGGTTCGGACCAGGACGCTGTTGCTGTGGCTG
CCTCCTGCGAGGCACCCGCGATGGAAGGACCCCAACGCACCATGAAAAGG
GCGGCCACTGCGCCGACGCGACGAGAGCCGGGCGAAGGGGTGCACCTCTT
GACAGGGGAAGAAGTTGCTCGAGTGCTGAAGGATGGCCCCGTTGTCCCGC
CGGTCTGCGTGTGCGGCTTGCACCGCACGTGCCCGCCGTCGCGTATCTGG
ATGCTGAACGACCACAGCCGAACAGCCTCGTTCCGGTCGGTTATTCGTTC
CATTCTCGCGGGCGGCGACGCTAGCCACCACGTTGCCAACGGACCCGAGA
ATCAACAGCACGACAACACGGCGAGTACCTCTGCCACGGTCGCCGCCGCC
GGGATCAAGAGGAGGCGGACCACACCAGCACCAGCATGCGTTGCGTGCAT
CTCAGACGGGTTCCTGCTTCCCCTCCTGGCAGCCCAAGCGGGCGCGTCAG
AGGTTCTCGAGATCCAACCCTCAGCCGCTTACGCGGCGGTTTGCCGAGAC
TTATACCACGCGAACGGGATCGACGTCGAAATCGACGGCGACGGCGACGG
CGACGGCGACGGCGACAACGACCCGGACCGACAAAGGATTATTCGGCCTT
TCCCCGGCGGCGTTTCAAGCGTGTATGAGCTGCTGATGCCGTCGCCGGGG
TCGGCCGCCCCGGACAACAACGGTTTCGGCTTGGCGGGAATATGGAAGCT
CGACGCCGTCATTGGGGAGCCTTTCTTCGCCGACCTGTCGACAGCTACCT
GGCCGCTCGAACCCCTGCTGCTGTTCTGGTGCGCGCGCACGGCTCTGGAG
ACCGGGGGGTGCTTTTCCCCGAGGACGAGAGTGGTGCCTGCTCGAGCACG
GCTTCTGGCCTGCCCCTTCGCTTGTGGCCTGCTCTTTCGGGGCCGGCGTC
CGGTAGAGAAGGTGGAGGGGGTCGACATGTCGGCGGTGAACCAACGCCTT
GGTGTTGGCTGTGCCATGGTGGAGCCTGATAGTGGACCGGAGAATGGAGG
CGAAGATGGCGGTGAGGACGTGAAAGAAAACAAAAGACTTGGAGGTGTCG
AGTCCGTGCGACTGTCCGAGTACGGGCACGACCTACTCGGCCCCCAGACC
GTTGTGTTGGACATGGACCTCACCCAACCGCTGTGCGATTTGCGCGGCGG
CCGCAAGGAAATCCGGTGCCGTGTTCGGCAGCCACCCTCCGCAACCGAAC
CTGGAGCAACAGAACCAGCACCCCAGCCGCGAGGGCAGGAGGGAGGGGAA
GCTGTGTGCCAGGGTGTGGCCCTGTGGCTGGACATCTGGCTGGATGAGGA
AGGATTGCATCGCCTTTCTACCGGGCCGGAAGTGCCCTACTGGTTGCAGG
GCGTGCTTTTCTTCGAGGAGGGATGGGTTGTGCCGCCGTGCGGTGGGAGC
TTCCACCTGGAAGCTGCGTTGGAAGATGGCGCCCTCAGCGTAGATGTGTC
GTAGGCGGCCACTGCGCCGACGCGACGAGAGCCGGGCGAAGGGGTGCACC
TCTTGACAGGGGAAGAAGTTGCTCGAGTGCTGAAGGATGGCCCCGTTGTC
CCGCCGGTCTGCGTGTGCGGCTTGCACCGCACGTGCCCGCCGTCGCGTAT
CTGGATGCTGAACGACCACAGCCGAACAGCCTCGTTCCGGTCGGTTATTC
GTTCCATTCTCGCGGGCGGCGACGCTAGCCACCACGTTGCCAACGGACCC
GAGAATCAACAGCACGACAACACGGCGAGTACCTCTGCCACGGTCGCCGC
CGCCGGGATCAAGAGGAGGCGGACCACACCAGCACCAGCATGCGTTGCGT
GCATCTCAGACGGGTTCCTGCTTCCCCTCCTGGCAGCCCAAGCGGGCGCG
TCAGAGGTTCTCGAGATCCAACCCTCAGCCGCTTACGCGGCGGTTTGCCG
AGACTTATACCACGCGAACGGGATCGACGTCGAAATCGACGGCGACGGCG
ACGGCGACGGCGACGGCGACAACGACCCGGACCGACAAAGGATTATTCGG
CCTTTCCCCGGCGGCGTTTCAAGCGTGTATGAGCTGCTGATGCCGTCGCC
GGGGTCGGCCGCCCCGGACAACAACGGTTTCGGCTTGGCGGGAATATGGA
AGCTCGACGCCGTCATTGGGGAGCCTTTCTTCGCCGACCTGTCGACAGCT
ACCTGGCCGCTCGAACCCCTGCTGCTGTTCTGGTGCGCGCGCACGGCTCT
GGAGACCGGGGGGTGCTTTTCCCCGAGGACGAGAGTGGTGCCTGCTCGAG
CACGGCTTCTGGCCTGCCCCTTCGCTTGTGGCCTGCTCTTTCGGGGCCGG
CGTCCGGTAGAGAAGGTGGAGGGGGTCGACATGTCGGCGGTGAACCAACG
CCTTGGTGTTGGCTGTGCCATGGTGGAGCCTGATAGTGGACCGGAGAATG
GAGGCGAAGATGGCGGTGAGGACGTGAAAGAAAACAAAAGACTTGGAGGT
GTCGAGTCCGTGCGACTGTCCGAGTACGGGCACGACCTACTCGGCCCCCA
GACCGTTGTGTTGGACATGGACCTCACCCAACCGCTGTGCGATTTGCGCG
GCGGCCGCAAGGAAATCCGGTGCCGTGTTCGGCAGCCACCCTCCGCAACC
GAACCTGGAGCAACAGAACCAGCACCCCAGCCGCGAGGGCAGGAGGGAGG
GGAAGCTGTGTGCCAGGGTGTGGCCCTGTGGCTGGACATCTGGCTGGATG
AGGAAGGATTGCATCGCCTTTCTACCGGGCCGGAAGTGCCCTACTGGTTG
CAGGGCGTGCTTTTCTTCGAGGAGGGATGGGTTGTGCCGCCGTGCGGTGG
GAGCTTCCACCTGGAAGCTGCGTTGGAAGATGGCGCCCTCAGCGTAGATG
TGTCGTAG
back to top