mRNA_C-linearis_contig103.862.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot
Match: D7FME9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME9_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.790e-9
Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = 2

Query:  449 RTWRERGWLIMVRARHQKSLTKSKGWMAKLKRLREGRRPCSLDTCTTTASSATTSGGPVDACTLEQDASEIELAEEGMSNTSFRTAVVAVVEIEEEGLFRNIITYL 766
            R W   GWLIM+RARHQ+ L + KGW  +L++L                          +A  + +   E+EL E G S  +F  AV AVVEI EEGLFR+II++L
Sbjct:  211 RRWHAGGWLIMIRARHQRFLARPKGWPIRLRKLERFN----------------------EANIVHKIPPELELLEAGRSRMNFVRAVTAVVEINEEGLFRHIISFL 294

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BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot
Match: D8LRK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRK1_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.990e-6
Identity = 42/111 (37.84%), Postives = 58/111 (52.25%), Query Frame = 2

Query:  449 RTWRERGWLIMVRARHQKSLTK-----SKGWMAKLKRLREGRRPCSLDTCTTTASSATTSGGPVDACTLEQDASEIELAEEGMSNTSFRTAVVAVVEIEEEGLFRNIITYL 766
            R W+ RGWL+M+RARHQ  L +     S+ W+ K    R+ R  C +    T      T+G   +     Q  ++IEL E+G  +  F  AVV+V  I EEG+FR I  YL
Sbjct:  144 RRWKRRGWLVMLRARHQIFLAQLQQNDSQPWLCK----RKLRDLCGITRVMTADDPLATAGN--EPSVGAQGIADIELNEQGTYDQEFAQAVVSVAGIMEEGIFRGITLYL 248

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BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot
Match: D8LNC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC9_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 1.510e-5
Identity = 39/96 (40.62%), Postives = 50/96 (52.08%), Query Frame = 2

Query:  479 MVRARHQKSLTKSKGWMAKLKRLREGRRPCSLDTCTTTASSATTSGGPVDACTLEQDASEIELAEEGMSNTSFRTAVVAVVEIEEEGLFRNIITYL 766
            M+RAR Q+SL +SKGW A+L++L         D       +     G        Q   EIEL E G    +F  AV A +EI EEGLFR+II+YL
Sbjct:    1 MMRARRQRSLARSKGWQARLRKLDH------YDEANIMKYAMRDFMG-------SQTPPEIELLEAGRLKMNFVRAVTAAIEIPEEGLFRHIISYL 83

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BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot
Match: D7FMF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMF1_ECTSI)

HSP 1 Score: 52.8 bits (125), Expect = 1.650e-5
Identity = 35/96 (36.46%), Postives = 49/96 (51.04%), Query Frame = 2

Query:  479 MVRARHQKSLTKSKGWMAKLKRLREGRRPCSLDTCTTTASSATTSGGPVDACTLEQDASEIELAEEGMSNTSFRTAVVAVVEIEEEGLFRNIITYL 766
            M+RARHQ+SL +S GW  +L++L    +                      A    +   E+EL E G S  +F  A +AVVE  EEGLFR+II++L
Sbjct:    1 MLRARHQRSLGRSTGWPVRLRKLERYNK----------------------ANIFNKIPPELELLEAGRSRMNFARAAMAVVETNEEGLFRHIISFL 74

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BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot
Match: D8LNB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB4_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 2.900e-5
Identity = 39/97 (40.21%), Postives = 55/97 (56.70%), Query Frame = 2

Query:  479 MVRARHQKSLT-KSKGWMAKLKRLREGRRPCSLDTCTTTASSATTSGGPVDACTLEQDASEIELAEEGMSNTSFRTAVVAVVEIEEEGLFRNIITYL 766
            M+RARH++S + +SKGW A+L++L        +       +     GG        Q   EIEL E G    +F  AV+AVVEI+EEGLFR+I++YL
Sbjct:    1 MMRARHERSSSARSKGWRARLRKLERYDEASIIK-----YAMRDFMGG--------QTPPEIELLEAGRLKMNFVRAVIAVVEIQEEGLFRHIMSYL 84

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot

BLAST of mRNA_C-linearis_contig103.862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5

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POSITION

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Match Name	E-value	Identity	Description
D7FME9_ECTSI	3.790e-9	39.62	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LRK1_ECTSI	2.990e-6	37.84	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNC9_ECTSI	1.510e-5	40.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7FMF1_ECTSI	1.650e-5	36.46	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LNB4_ECTSI	2.900e-5	40.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]