mRNA_C-linearis_contig103.859.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: D7FMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG3_ECTSI) HSP 1 Score: 436 bits (1121), Expect = 2.610e-124 Identity = 468/1365 (34.29%), Postives = 567/1365 (41.54%), Query Frame = 1 Query: 13 MVVPPADERRA-PRPAVAKTESRRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNGGNKLPPAVAPEXXXXXXXXXTKPPCAQGRNRHDTTRCVRETFYLALFSLSGSTNSSGASTGRGAGAFTXXXXXXXXVGAAGHHQYTHRGEASSGKGGFGAKDHENLATASGTRAPSVASAATGNGGVALEGEANRGALGRGXXXXXXXXXGVMRERAVPTSSRKKGRPRKATGLAELERYMACAQEAAQEVLHDVGKIDDPLQRQKVSPWAMEATLTSDPREEVSAGGSVAAIDLASGRAAFREKLKKNLEKTGGLHCQRTGGSAKAASRKRVDKSAPRKQQRSAT-------AATARVPNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPAAAGRGGVGGLHSNQDSCNPNGSSRGSXXXXXXXXXXXXXXNDNHLIALGAGGVIQSHGHPAKTPASRAGEGRRPNAPKLSGPKSGHGSRVDNYHQPKNVAVDPHNLLEDMGGAAAGAGESGALGKVGAFLVTPKNWLGPTS----NQRMAPAFTVGDIRE---TSAGQKAPG------GLFRPGLTVETGDQQAFADHSNLNTIDVSGGVMKRRLNSNNPDLLSPFSLDGFHSPSLRRSPRLHPGLFDFDSAVIGGDLGYSVCGGSGSGAQPAQVGGV-------GALSLHAGGFIRLGSSGSASGNKKVNHPADRQPSAAAGRRTAKRGRTQRGTSTAGGGASPAGGAGLSVET----EDPLSISMLMLTESPRLKLPHEALATGTSTGNIIHSIINSNXXXXXXXXXXXXXXXXSDGLAGTGIGCGSNDFTGYFDGITSMD----DTSGGGGGLRRSPRLHPGLFIGDDNLIAGDIGALGPGTXXXXXXXXXXXXXXXXXXXXXXXXLGSHLVGKQCSFFGAGTTG--------RNGGSG-GRCRPSSRGFPVGDRHHHQGPAVSVSPEPMLAGHATSIQTLVLEANTPTEEXXXXXXARMEDGPRV-----LGFVKSELGSGGSQAPSDLGKQRQXXXXXXXXXRWETDAAYMATTAQGKGHTAGWPSETAAAGVEGGDESRGGSVTKRKRISPNVFAPTSSGKKS-----RAGGDPGVGSELGMETTARKIETTVNSSSSNSER-----------SRRSP-------PPVQLRSSLPSASASIDSNNSL-PRIVAGDSGIGSGFSYLGY-PTMTSSGDAVATTVATKSTDSVSPDGAAYSNISLRTDRAGADHKTSP---PRLVIPQSGGLGLKLGFAPFHGGGDVGGL 3873
M+VPP DER P AV +T+SRRPWT HDD+AVR+LVA HGT+NWAVVEQ+M++VYGI GRSGKQSRERWHNHLNPSIKKNAWT +EERIM+EARA+LGNRWSEIAKLLPGRTDNQVKNHW G+N G + G +T +GA T+ RKKGRPRKATGLAELERYMACAQEAAQ VL D G+ DP RQ+ +P ME T+TS PR G SVAAI++ASGRAAFREKLK+NLEKTGGLHCQRT A+ RK DK+ + A + P G P GV D P+G S G+ + G R N ++A+ PHNLL +MG A G LG + + + P + Q MAP FTVG+ T+ G P GLFRP LTVET D Q GG KRR + D +SP LDG SLRRSPRLHP FDFDSA I G+L + G G G V G G L+L GFIRL GN N R P+ AAGR + A AG + E PLS + + + P +L +AL TGT + + + G+ GT +G GSNDF+GYF+G+ S++ D + G GG R SPRL PG+F GD++L AGD AL PG+ LGSHLVG Q F G T G G G GR RP SRGFPVG HQ P + G A + P + G L KS + G PS+L RQXXXXXXXXX + +TT + G AG + GG GG +KRKR S FA +S K+ R GG G G E A K ET V S S +R SRRSP P Q + A+ + +L PR++ G S SG+ Y G+ P +T++ D T +V P +A + I L T T P +IP+SGGLGL+L FAPFHGG GGL
Sbjct: 1 MIVPPVDERPLRPAAAVTRTDSRRPWTKHDDNAVRELVATHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHLNPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKNHW-------------------------------------------DGKN--------------------GGKSKGGLNTEKGA-----------------------------------------------------------------------------------------------TACRKKGRPRKATGLAELERYMACAQEAAQAVLKDSGRPQDPTLRQQ-NPQGMEVTVTSAPRGRPPVGASVAAIEMASGRAAFREKLKQNLEKTGGLHCQRTAA-ARPPHRKVADKTKTIVKNEKAKDVKVVKQSKNGVSPTGRTLPAGSTGGYGGGGVFPADAATTVGLYPPVNQPSNGV----QQHDGHQPSGVSSGNPQLESRLSNGRRSKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTNTGRRATN-----DIAMSPHNLLPEMGTAGTKTSVEGGLGTFDSNTIKDTHNASPNAPSLKQQAMAPIFTVGEASGACGTAVGLATPAAGAVATGLFRPALTVETTDGQPS-----------EGGGAKRRHHRRGLDPMSPLHLDG--PSSLRRSPRLHPHAFDFDSADICGELLFDHDGLDGGGCDAHLVQGSDGCADGGGPLALDERGFIRL------VGN---NTRGTRAPTEAAGRARVES-------------VDVAAAAGFKNSSHQAREGPLSPTTVSIFSPPPFELHDDALGTGTHSSS-------------------------AGGVGGTAVGIGSNDFSGYFEGMHSLNNLGHDGTSGSGGRRLSPRLRPGMFAGDNSLTAGDFAALSPGSLDAGSLGSLGSLGGSVVGGS----LGSHLVGTQFFFLGTDTGGGXXXXXXXXXGDRGHGRSRPCSRGFPVGV---HQ-----TDPRSTVTGPAAADPLDAAPCMPPLRDEMRPAAVAKAGGVGAHVLADLDVDKSPAHAKGFATPSEL-LSRQXXXXXXXXXXPRMLSTSPSTTMELFG-AAGGIGVGEGSHEAGGIVGSGGGASKRKRTS---FAVATSAAKTGSDQHRQGGGLDKGGCTG-EDPATKTETIVRSGQSKKQRRRSTAATFPRSSRRSPLANDAAASPRQKQQYDHGDEAANSGDTTLGPRLLTGSSNPSSGYPYPGFTPRLTTTTDVSNPTPRV----AVEPRWSA-TEIKLETRHTDGGAGTGPRDGAARMIPRSGGLGLQLSFAPFHGGAGAGGL 1113
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: A0A6H5L4X1_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X1_9PHAE) HSP 1 Score: 374 bits (961), Expect = 2.380e-103 Identity = 461/1371 (33.63%), Postives = 564/1371 (41.14%), Query Frame = 1 Query: 73 SRRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNGGNKLPPAVAPEXXXXXXXXXTKPPCAQGRNRHDTTRCVRETFYLALFSLSGSTNSSGASTGRGAGAFTXXXXXXXXVGAAGHHQYTHRGEASSGKGGFGAKDHENLATASGTRAPSVASAATGNGGVALEGEANRGALGRGXXXXXXXXXGVMRERAVPTSSRKKGRPRKATGLAELERYMACAQEAAQEVLHDVGKIDDPLQRQKVSPWAMEATLTSDPREEVSAGGSVAAIDLASGRAAFREKLKKNLEKTGGLHCQRTGGSAKAASRKRVDKSAPRKQQRSATAATARVPNGXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPAAAG------RGGVGGL--HSNQDSC-----NPNGSSRGSXXXXXXXXXXXXXXNDNHLIALGAGGVIQSHGHPAKTPASRAGEGRRPNAPKLSGPKSGHGSRVDNYHQPKNVAVDPHNLLEDMGGAAAGAGESGALGKVGAFLVTPKNWLGPT----SNQRMAPAFTVGDIR---------ETSAGQKAPGGLFRPGLTVETGDQQAFADHSNLNTIDVSGGVMKRRLNSN-----------------NPDLLSPFSLDGFHSPSLRRSPRLHPGLFDFDSAVIGGDLGYSVCGGSGSGAQPAQVGGV-------GALSLHAGGFIRLGSSGSASGNKKVNHPADRQPSAAAGRRTAKRGRTQRGTSTAGGGASPAGGAGLSVET-EDPLSISMLMLTESPRLKLPHEALATGTSTGNIIHSIINSNXXXXXXXXXXXXXXXXSDGLAGTGIGCGSNDFTGYFDGITSMDDT----SGGGGGLRRSPRLHPGLFIGDDNLIAGDIGALGPGTXXXXXXXXXXXXXXXXXXXXXXXXLGSHLVGKQCSFFGAGTTGRNGGSGG----------RCRPSSRGFPVGDRHHHQGPAVSVSPEPMLAGHATSIQTLVLEANTPTEEXXXXXXARMEDGPRVLGFV-------KSELGSGGSQAPSDLGKQRQXXXXXXXXXRWETDAAYMATTAQGKGHTAGWPSETAAAGVEGGDESR--------GGSVTKRKRISPNVFAPTSSGKKSRAGGDPGVGSELGMET---TARKIETTVNSSSSNSERSRRSP---PPVQLRSSLPSA-----------------SASIDSNNSL-PRIVAGDSGIGSGFSYLGY-PTMTSSGDA-VATTVATKSTDSVSPDGAAYSNISLRTDR----AGADHKTSPPRLVIPQSGGLGLKLGFAPFHGG 3855
SRRPWT HDD+AVR+LVA HGT+NWAVVEQ+M++VYGI GRSGKQSRERWHNHLNPSIKKNAWT +EERIM+EARA+LGNRWSEIAKLLPGRTDNQVKNH C G G T KGG A+ +GA T+ RKKGRPRKATGLAELERYMACAQEAAQ VL+D G+ DP+ RQ+ ME T+TS PR G SVAAI++ASGRAAFREKLK+NLEKTGGLHCQRT A+ RK DK+ R ++ A A+ AA G + GL H C NP SR S XXXXXXX A R GRRP+ + G R N ++A+ PHNLL DMG G LG + + + P Q MAP FTVG T A GLFR LTVET D Q GG KRR + +P LSP LD SLR+SPRLHP +FDFD+A I +L + G G G V G G L+L GFIRL GNK+ R P+ AAGR + A+ G S + E PLS + + + P +L +EA TGT + + + G+ GT +G GSNDF+GYF+G+ +++ + G GG RRSPRLH G+F GD +L AGD A PG+ LGSHL+G Q F G T G GG R RP SRGFPVG HQ P + G A + P + G V G+ KS + G PS+L XXXXX ++T K + G AA G+ GD SR G +KRKR S + FA TS+ G G E G T A K ET V SS S +R R + P RS L +A A+ + +L PR++ G S SG +Y G+ P +T++ ++ A VA V P +A + I L T AGA + R+ IP+SGG+GL+L FAPFHGG
Sbjct: 9 SRRPWTKHDDNAVRELVAAHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHLNPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKNH------------------------------------------CKDG----------------------GKT-----------------------------------------KGGLNAE---------------------------------KGA----------------------TACRKKGRPRKATGLAELERYMACAQEAAQAVLNDSGRPQDPILRQQ----GMEVTVTSAPRGSPPVGASVAAIEMASGRAAFREKLKQNLEKTGGLHCQRTVA-ARPPHRKLADKT--RTTVKNEKAKDAKYVKQCKRGVSHTGRTSPAGSTDDYGSGGVFPVDTAATGGLYPPVKQPSNGLQQHDGHRPCGVSSGNPQLESRLSNGRRSKIXXXXXXXXXXXXXXXXXXXXXXXXXXGASRTTGREPGGRRPS--------TNTGRRATN-----DIAMSPHNLLPDMGTTGTKKPVEGGLGTFDSDTIKDTHSSSPNVPSLKQQAMAPIFTVGKASGACGAAVGLATPAAGAVATGLFRSALTVETTDGQH-----------AEGGGAKRRHHRRVGRRHGGVRPSGVSPTPHPRDLSPLHLD--EPSSLRQSPRLHPHVFDFDTADICSELLFGDDGVDGGGCDAHLVQGSDGCADGGGPLALDEKGFIRL------VGNKR----GTRAPTEAAGRTRVESVDV----------AAAVGSKSSSHQAREGPLSPTTVSIFSPPPFELHNEAFGTGTHSSS-------------------------TGGVGGTAVGIGSNDFSGYFEGMQYLNNLGYNGTSGSGGRRRSPRLHLGMFAGDSSLAAGDFEAPSPGSLDAGSLGSLGGSVIGGS-------LGSHLLGTQSFFLGTDTVG--GGXXXXXXXXXXXXXRSRPCSRGFPVGV---HQ-----TDPRSTVTGPAAADPLGAAPCTPPLRDEMRSAAVAKAGG--VGGYALADLDIDKSPAHAKGFATPSEL-----LSWQXXXXXXXXXXXXXLSTPPSTKMGSLG-----AAGGIGVGDGSREAGGIVGSAGGASKRKRTSCS-FA-TSAXXXXXXXHRQGXGMEEGGCTGGDPATKTETIVRSSQSKIQRRRSNAATFPRSSRRSPLANAXXXXXXXXXXXXXDHGNEATNSGDTTLGPRLLTGSSNPNSGNAYPGFTPRLTTTDESNPAPRVA------VGPRWSA-TEIKLETRHTDGGAGAGPRDGAARM-IPRSGGIGLQLSFAPFHGG 1102
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN) HSP 1 Score: 176 bits (446), Expect = 1.950e-47 Identity = 78/118 (66.10%), Postives = 97/118 (82.20%), Query Frame = 1 Query: 76 RRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNGG 429
RR W+ +D A++ LV +GTR+W+V+ +H+V+ Y I GR+GKQ RERWHNHL+P I K+AWT +EER+M++A LGN+WSEIAKLLPGRTDN VKNHWYSFMRRNVRRL REVN G
Sbjct: 6 RRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDG 123
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.360e-47 Identity = 86/128 (67.19%), Postives = 104/128 (81.25%), Query Frame = 1 Query: 76 RRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNGGNK-LPPAVAP 456
RR WT +D A+R+LVA+HGTR+W+V+ + +VT + I GR+GKQ RERWHNHL+P+I K AWT EEE+IM EA ELGN+WSEIAK LPGRTDN VKNHWYSFMRRNVRRL REV+ G L P++AP
Sbjct: 53 RRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVRRLNREVSEGIPGLDPSLAP 180
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN) HSP 1 Score: 176 bits (445), Expect = 2.600e-46 Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 76 RRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELG-NRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNGGNKLPPAVAPEXXXXXXXXXTKPPCAQGRNRHDTTRCVRETFYLA 561
RR WT +D+A+RQLV ++GTR+W+V+ +H+V + I GR+GKQ RERWHNHL+P I K AWT EEERIM++A LG N+WSEIAKLLPGRTDN VKNHWYSFMRRNVRRL REVN G V + P +GR+R + ++ A
Sbjct: 7 RRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDGQPNHQHVGIVAKQARPSDSFQAPPKRGRSRKAANLAELQRYFTA 169
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI) HSP 1 Score: 180 bits (457), Expect = 4.330e-45 Identity = 81/121 (66.94%), Postives = 100/121 (82.64%), Query Frame = 1 Query: 64 KTESRRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNG 426
++E+RR W+ +DDA+R LV HGTR+WA +E+H+ Y I+GRSGKQ RERWHNHL+PSIKK WT EEE ++++ RAE+GNRWSEIAK LPGRTDNQVKN WYS MRRNVR L+REV+G
Sbjct: 13 RSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSG 133
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA) HSP 1 Score: 163 bits (413), Expect = 1.340e-37 Identity = 74/126 (58.73%), Postives = 95/126 (75.40%), Query Frame = 1 Query: 76 RRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNGGNKLPPAVA 453
RR W+ +DDA+R LV EHGT+ W+ + +++ Y I R+GKQ RERWHNHL+P+I+K+ WT EEE IM++A LGNRWSEI+KLLPGRTDN +KNHWYS MRRNVRRL +EV G + +A
Sbjct: 14 RRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHWYSMMRRNVRRLNKEVLDGMPMSAPLA 139
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: A0A835ZL73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL73_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.010e-36 Identity = 76/118 (64.41%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 73 SRRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREVNG 426
+RR W+T +D A+R LV + G + W+ V M T Y I GR+ KQ ERWHNHL+P I K WT +EER+M++A AELGNRWSEIAK LPGRTDN VKNHWYS MRRNVRRLTREV G
Sbjct: 37 ARRSWSTKEDAAIRSLVDKLGMQAWSQVAAAMETEYAIFGRTSKQIWERWHNHLSPGISKAPWTPQEERVMAQAHAELGNRWSEIAKRLPGRTDNHVKNHWYSSMRRNVRRLTREVGG 154
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: A0A7S2SND5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.590e-35 Identity = 70/115 (60.87%), Postives = 88/115 (76.52%), Query Frame = 1 Query: 76 RRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRLTREV 420
RR W+ +D+A+R LV E GT+ W+ + + Y I GR+GKQ RERWHNHL+P IKK W+ EE+ ++EA +LGNRWSEI+KLLPGRTDN +KNHWYS MRRNVRRLT+EV
Sbjct: 43 RRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHLDPEIKKCPWSESEEQALAEAHQKLGNRWSEISKLLPGRTDNAIKNHWYSTMRRNVRRLTKEV 157
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Match: A0A1R2BY67_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BY67_9CILI) HSP 1 Score: 143 bits (360), Expect = 1.300e-34 Identity = 60/113 (53.10%), Postives = 86/113 (76.11%), Query Frame = 1 Query: 70 ESRRPWTTHDDDAVRQLVAEHGTRNWAVVEQHMVTVYGIIGRSGKQSRERWHNHLNPSIKKNAWTTEEERIMSEARAELGNRWSEIAKLLPGRTDNQVKNHWYSFMRRNVRRL 408
+ R+PW + +D+A+R LV +GT+ WA++ + + T Y I GRSGKQ RERWHNHLNP++KKN+W EE + + +LGN+W+EIAKL+PGRTDN +KNH+YS ++R R+L
Sbjct: 20 QKRKPWCSSEDEAIRALVVINGTQQWAIIAKRLETEYNIKGRSGKQCRERWHNHLNPTVKKNSWELHEELTLFQGHLDLGNKWAEIAKLMPGRTDNSIKNHFYSTLKRQYRKL 132 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.859.1 >prot_C-linearis_contig103.859.1 ID=prot_C-linearis_contig103.859.1|Name=mRNA_C-linearis_contig103.859.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1651bp MVVPPADERRAPRPAVAKTESRRPWTTHDDDAVRQLVAEHGTRNWAVVEQback to top mRNA from alignment at C-linearis_contig103:541556..550498+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig103.859.1 ID=mRNA_C-linearis_contig103.859.1|Name=mRNA_C-linearis_contig103.859.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8943bp|location=Sequence derived from alignment at C-linearis_contig103:541556..550498+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig103:541556..550498+ >mRNA_C-linearis_contig103.859.1 ID=mRNA_C-linearis_contig103.859.1|Name=mRNA_C-linearis_contig103.859.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=9906bp|location=Sequence derived from alignment at C-linearis_contig103:541556..550498+ (Chordaria linearis ClinC8C monoicous)back to top |