Homology
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
A0A6H5KUS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUS8_9PHAE)
HSP 1 Score: 337 bits (864), Expect = 1.690e-108
Identity = 169/207 (81.64%), Postives = 186/207 (89.86%), Query Frame = 2
Query: 326 MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 946
M+STT YDHLVKLL+IGDSGVGKSCLLLRYSD QFSGSYISTIGIDFKIKT LMG+K KLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSF+NV NWMRQIELNA+PDVN+TLVGNK DV ++ER VS EQGQ LAAE G+ VRFFETSARSNVNVTEAFEGLATDVI RLQ+QD+A++A V LKLG+EEP K +DCC
Sbjct: 2 MHSTTGYDHLVKLLIIGDSGVGKSCLLLRYSDDQFSGSYISTIGIDFKIKTVFLMGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDLKSFKNVGNWMRQIELNAAPDVNVTLVGNKSDVAEEERVVSLEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQAQDEASLARVAPLKLGQEEPTKK-SDCC 207
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
A0A485LS68_9STRA (Aste57867_25075 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485LS68_9STRA)
HSP 1 Score: 249 bits (637), Expect = 7.360e-75
Identity = 128/206 (62.14%), Postives = 162/206 (78.64%), Query Frame = 2
Query: 335 TTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQS--QDQAAIAGVPTLKLGKEEPKSKLADCC 946
+++YD LVKLL+IGDSGVGKSCLL+RYSD F+ S+I+TIGIDFK+KT + G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DD SF+NV NWMRQI+ +ASP+VN L+GNKCDV ERAV+ EQG+ALA E G V+FFETSA+SN+NV EAF +A DV RL D++ +A +KL ++ ++ CC
Sbjct: 5 SSKYDLLVKLLLIGDSGVGKSCLLMRYSDDSFTTSFITTIGIDFKVKTIEVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERAVTKEQGEALANEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRSDVANQTRIKLDEQNSRAASEGCC 208
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
D7FME1_ECTSI (Rab8B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME1_ECTSI)
HSP 1 Score: 241 bits (614), Expect = 2.620e-72
Identity = 122/153 (79.74%), Postives = 135/153 (88.24%), Query Frame = 2
Query: 488 MGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 946
MG+K KLQIWDTAGQERFRNITSAYYRGSMGI+LVYDV+D KSFRNV NWMRQIELNA+PDVN+TLVGNK DV + ER VSFEQGQ LAAE G+ VRFFETSARSNVNVTEAFEGLATDVI RLQ+QD+A++A V LKLG+EE K +DCC
Sbjct: 1 MGKKAKLQIWDTAGQERFRNITSAYYRGSMGIMLVYDVTDVKSFRNVGNWMRQIELNAAPDVNVTLVGNKSDVAEAERVVSFEQGQRLAAEHGDHVRFFETSARSNVNVTEAFEGLATDVITRLQTQDEASLARVAPLKLGQEESTEK-SDCC 152
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
A0A067CHF2_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHF2_SAPPC)
HSP 1 Score: 242 bits (617), Expect = 5.810e-72
Identity = 127/209 (60.77%), Postives = 161/209 (77.03%), Query Frame = 2
Query: 326 MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQS--QDQAAIAGVPTLKLGKEEPKSKLADCC 946
M +++YD LVKLL+IGDSGVGKSCLL+RYSD F+ S+I+TIGIDFK+KT + G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DD SF+NV NWMRQI+ +ASP+VN L+GNKCDV ER V+ +QG+ LAAE G V+FFETSA+SN+NV EAF +A DV RL D+ +A +KL ++ + +D C
Sbjct: 1 MVHSSKYDLLVKLLLIGDSGVGKSCLLMRYSDDTFTSSFITTIGIDFKVKTIDVDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNVRNWMRQIQQHASPNVNKILIGNKCDVDPSERVVTTQQGEELAAEYG--VQFFETSAKSNLNVEEAFRSIAVDVQKRLAECESDRLDVANERKIKL--DDHADRTSDGC 205
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
W7U3B0_9STRA (Rab8-family small gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3B0_9STRA)
HSP 1 Score: 238 bits (607), Expect = 1.910e-70
Identity = 122/203 (60.10%), Postives = 155/203 (76.35%), Query Frame = 2
Query: 338 TQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 946
++YDHL+KLL+IGDSGVGKSCLLLRYS+ F+ S+I+TIGIDFKIK+ L +K+KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D++SF NV NWMRQIE +AS VN L+GNKCDV +R VS EQG+ LA E R++FFETSA+ NVNV EAF +A D+ LR+ ++ +G +K+G + +CC
Sbjct: 11 SKYDHLIKLLLIGDSGVGKSCLLLRYSEDSFTPSFITTIGIDFKIKSLPLEDKKLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANVKNWMRQIEQHASESVNKILIGNKCDVDPADRRVSLEQGRKLAEEY--RIKFFETSAKENVNVDEAFYTVARDIALRIDNEVDLTASG-KNVKIGPGVGPAGGKECC 210
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
A0A6A2YIZ8_HIBSY (Ras-related protein RABE1e n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2YIZ8_HIBSY)
HSP 1 Score: 235 bits (600), Expect = 2.150e-69
Identity = 122/204 (59.80%), Postives = 155/204 (75.98%), Query Frame = 2
Query: 344 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLA---DCC 946
YD L+KLL+IGDSGVGKSCLLLR+SDG F+ S+I+TIGIDFKI+T L G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF N+ NW+R IE +AS +VN LVGNK D+ + +RAV QGQALA E G ++FFETSA++N+NV E F +A+D+ RL D A +K+ KE+P + A +CC
Sbjct: 12 YDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKADMDESKRAVPTSQGQALADEYG--IKFFETSAKTNLNVEEVFFSIASDIKQRLTESDNKAEPAA--IKINKEDPGASSAQKSNCC 211
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
H3G925_PHYRM (Uncharacterized protein n=19 Tax=Oomycota TaxID=4762 RepID=H3G925_PHYRM)
HSP 1 Score: 235 bits (599), Expect = 2.550e-69
Identity = 119/207 (57.49%), Postives = 153/207 (73.91%), Query Frame = 2
Query: 326 MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 946
M +++YD L+KLL+IGDSGVGKSC+LLRYSD F+ S+I+TIGIDFK+KT + G+++KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+DD SF+N+ NWM QI NAS +VN L+GNKCDV ERAV+ +QGQ LA E G ++FFETSA+SN N+ EAF +A D+ RL + + K +E + + D C
Sbjct: 1 MVHSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCDVDPSERAVTTKQGQDLADEFG--IKFFETSAKSNKNIDEAFRSIAVDIQKRLAESEHDRLDVANGSKFRVDESQEQAKDSC 205
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
Q019D2_OSTTA (Small GTPase superfamily, Rab type n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q019D2_OSTTA)
HSP 1 Score: 235 bits (599), Expect = 3.100e-69
Identity = 124/201 (61.69%), Postives = 153/201 (76.12%), Query Frame = 2
Query: 344 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKLGKEEPKSKLADCC 946
YDHL+KLL+IGDSGVGKSCLLLR+SD QF+ S+I+TIGIDFKIKT L G++VKLQIWDTAGQERFR IT+AYYRG+MGILLVYDVSD++SF NV WMR IE +AS +VN L+GNKCDV +D+R +S +GQALA E G + FFETSA+S+VNV +AF +A D+ RL + + LG + +K A CC
Sbjct: 18 YDHLLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVELGGKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVSDERSFENVRGWMRNIEQHASSNVNKILIGNKCDVKEDKRVISKARGQALADEFG--IPFFETSAKSSVNVNDAFMTIAGDIKNRLTGSK--GLGAPNAINLG-DRAATKRASCC 213
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
A0A5J4Y2D1_9CHLO (Rab8-family small GTPase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y2D1_9CHLO)
HSP 1 Score: 234 bits (598), Expect = 4.630e-69
Identity = 122/207 (58.94%), Postives = 156/207 (75.36%), Query Frame = 2
Query: 344 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQA-----AIAGVPTLKLGKE-EPKSKLADCC 946
YD+L+KLL+IGDSGVGKSCLLLR+S+ F+ S+I+TIGIDFKIK LL + +KLQIWDTAGQERFR ITSAYYRG+MGILLVYDV+DD SF N+ NWMR IE +AS +VN LVGNKCD+ + +R V + +GQALA E G ++FFETSA+SN+ V E F+ +A DV+LRL+ QA A +G +K+ ++ K + CC
Sbjct: 10 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILLDNKWIKLQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDDASFNNIRNWMRNIEQHASDNVNKVLVGNKCDMDESKRVVPYSKGQALADEFG--IQFFETSAKSNLKVDEVFQSVAKDVMLRLRETQQAGGGAPASSGGTRVKVDQQGSAKPSSSGCC 214
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Match:
I1HT75_BRADI (Uncharacterized protein n=16 Tax=Poaceae TaxID=4479 RepID=I1HT75_BRADI)
HSP 1 Score: 234 bits (597), Expect = 6.700e-69
Identity = 120/206 (58.25%), Postives = 157/206 (76.21%), Query Frame = 2
Query: 344 YDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIKTALLMGRKVKLQIWDTAGQERFRNITSAYYRGSMGILLVYDVSDDKSFRNVSNWMRQIELNASPDVNITLVGNKCDVGDDERAVSFEQGQALAAERGERVRFFETSARSNVNVTEAFEGLATDVILRLQSQDQAAIAGVPTLKL-----GKEEPKSKLADCC 946
YD+L+KLL+IGDSGVGKSCLLLR+SDG F+ S+I+TIGIDFKI+T L G+++KLQIWDTAGQERFR IT+AYYRG+MGILLVYDV+D+ SF N+ NW+R IE +AS +VN L+GNK D+ + +RAVS QGQALA E G ++FFETSA++N+NV + F +A D+ RL D T+K+ G E+P+S+ + CC
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLIGNKADMDESKRAVSTAQGQALADEYG--IKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPED--QTIKINKTGQGSEDPESQKSACC 214
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.839.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.69e-108 / Id = 81.64 Expect = 7.36e-75 / Id = 62.14 Expect = 2.62e-72 / Id = 79.74 Expect = 5.81e-72 / Id = 60.77 Expect = 1.91e-70 / Id = 60.10 Expect = 2.15e-69 / Id = 59.80 Expect = 2.55e-69 / Id = 57.49 Expect = 3.10e-69 / Id = 61.69 Expect = 4.63e-69 / Id = 58.94 Expect = 6.70e-69 / Id = 58.25 Sequence A0A6H5KUS8_9PHAE A0A485LS68_9STRA D7FME1_ECTSI A0A067CHF2_SAPPC W7U3B0_9STRA A0A6A2YIZ8_HIBSY H3G925_PHYRM Q019D2_OSTTA A0A5J4Y2D1_9CHLO I1HT75_BRADI Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.839.1
>prot_C-linearis_contig103.839.1 ID=prot_C-linearis_contig103.839.1|Name=mRNA_C-linearis_contig103.839.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=208bp
MYSTTQYDHLVKLLVIGDSGVGKSCLLLRYSDGQFSGSYISTIGIDFKIK back to top mRNA from alignment at C-linearis_contig103:326997..336823+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.839.1 ID=mRNA_C-linearis_contig103.839.1|Name=mRNA_C-linearis_contig103.839.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=9827bp|location=Sequence derived from alignment at C-linearis_contig103:326997..336823+ (Chordaria linearis ClinC8C monoicous)GAAATCCCCCGTGCTGGGGATTATACGCGCTGCGGCGTCTACGCGCAGGG
TGTAGGGTGCACGTTCATTCTCATTGTGCTGTTGCTTGTCTACGTTGCTC
TTGCTGGCGAAGCTCGGACGACAGCACACGGTAGTAGCTGGTGCTGTATC
GTGGTAGGGACGTGCTAAAGAAAGGGTCTTGAGAGAGCCTTTTTTGGTGT
TGGTCGGGCGGGGGCAGGCAGCAACCACGGACAAATTGAAGCCGCGGGAA
AGTATCCAGCAGGAGATCCAGCAGTAGCAGCAGCACTACCGTTGGCTCCC
TCCTCTCTCTCTCTCGGCGTGAGCG ATGTACTCGACCACGCAGTACGACC
ACCTGGTCAAGCTTCTGGTCATCGGGGACTCAG GTGAGGAAGGGTGGGGC
GTACTTGGCAGCAATTCTGGGAAAGGTGCTCCTGTTTCGTAGGTTGAGCA
TGGGCAACGTTTCATCTTTGCATCCTCCTCTCGTATACTCTAATTTAGAT
CTCGAAAAGTTATCATCGTTCCTGCACTACTCGTGGCAACCCCAGACTCG
ATCGCGGTTTCCCCATGAAGCGCTGGGGCATACTCCCCTCTAGCGGCAGC
AGTTGGTCACCCTCTGCAGCGACGTTCCGTCTTGTCTATCTTCGCAAGCG
GTCAGAATACCTAAACATAGAGTAGAGTAGACAGCACCCCCGCCTGAAAC
TCCCAAAGAGGATACATATACAATGTACAGCAGCAGAACGATGTGCACAG
CCGTTGCTGATGTTCCCCGAAAAAGGGCAGCGCCAACGGTACCGCCAATA
CACAAGAGTTCGTCTCAGCTTTTCGTGGATATCTTGTTTTGAACGGGTGG
GTAGGGGGTACCTTGTGATTTGGAAGCGAAGCGCACACACATGTGGAAAC
CCGGCGCGGCATGTTGTACTGCTGTATCTCCAATGATGTTCCGTGAAGTT
CACCGGCTTTTTCCCGCATCCAGTGCCGGTGGCCTCGGTGGACTGTGGTT
TAACCTCGAACCCACTAGCAGCAAAGTCTGGAGTCTGGAGTTCAATTCCA
AGCAAAGGTGATTCTTGTGTGCGACTTTGACCGGTGAAAGCGATAACATA
GCTGAAAAAGCTCGTGAGTACCAAACTTCGACTTAGCACGTTGACGAGGG
AAAGGGATGGCTGCACCCTTCTCGCGATAAAATCCAAGGCAAGCACCGCA
GGAGGAAGGTGGGGCAATAATGTGTTTTGTGTTTTTTTTATAATGTGTTT
TCGTCCCATTTATTTTGGCGACAGTCCCTTTCCGATCAAGGCGAGACGTG
TACTACACGTTGCGGTGTATTTAGAGTACTACTTCGAAGTACAAGTACAC
TTGTACAGAAGTGTATTTTTCTGTAGAACCAACCGGGGTCGCACAGGATG
GGGTAAACACTGGGGCTTTTTTCTTCTTTTTCTGTTTTTTTTTGCCCCAC
CTTCCTCTTGCGGTGCTTGCCTTGGATTTTATCGCGAGAAGGGTGCAGCC
ATCCCTTTCCCTCGTCAACGTGCTAAGTCGAAGTTTGAAAGTTTGGTACT
CACGAGCTTTTTCAACTATCTATGTCATCGCTTTCACCTTCAAAGTCGCA
AAATAAACACCTTTGCTTGGAATTGAACTCCAGACTTTGCTGCTAGTGGG
TTCGAGGTTAAACCACTAGTCCACCGGGGCGACGGGCTTAATAAAGAAAC
AGAACAAGAAGAAAAAAGCCCCAGTGTTTACCCCCTCCTGTGTGACCTCC
GTTGGTTCTACTTGCACAGAAAAATACACTGAACAAGTGTAGTACTCTAA
ATATGGTACACCGCAACGTGCAGTGCACGTCTCGCCTTGATCGGAAAGGG
ACTACTGTCGCCAAAATAAATGGGACGAAAACGAAAACACACACACACAC
ACACACAGCAGTACAGCACGGTACGGCGGTGAAGGAATGACACGTCCACA
CTTTTCGAGCTTTGCCCACCCCCAAATCCGAATTCGGGCACACGTAGAGT
TTTCTCGTCGTCATCCCTATAATAGTTTTTTTGCAAAAGGGCGGGGTAGT
TGTAGAGGTAGACTAACCAAAAAGCCTCCTGTTGCTGTTGCACGGCGGTG
GGCAGTTGTTGTTGTTGTTGTTGTTGTCTTCACATTAAAAACTATCCCGG
TCTCGTTACTATCCAGTACCTCCTTCTGTCTCAACCTCTCCGTACTAATC
CATCACTTGACGCGGCCAATTTCCGTGGTCACAGGCTAACTTACCTAAAA
AGTTATACAGAAAAATAAAACGGTGGGTGTAGGGAAAACGATCGCTGTTG
ATCGTTGGGAAAGGGGCGTGTGTGTGAACGAAGTTCTTTGTGTACATATG
TGTGGATGTATGCGCAGAAGCAGAAAATACGAAAATACACGAAAGAACGC
CGAATGTTGGCGCATGAGTAGGGGGGTACCGCAAGTGTTTGAGCGATGGC
ACACCTGTGCGATCGTTCTTCAAAGCTTGATTTCTCCTTAACCAGGAGGA
GGGTATCACTGCCGAAAAGGAAAGGTGATTTTTGAAAGATCTTCGTAGAT
CTCGTCTAGAGCTTTCGTATGACGGGCCGTTTGGTGTTCGCACCCTCCTG
GTTGTGGAGCAATTAAGCTTTGAAAAACGATCGCACAGGTTTGCAATCGC
TCGAACACTTGACGGTAGTCTAGACGCCAGCGGCCCCTCTATCCCTTTTT
TGATACGTGTCGTGCGAGTGAATAATATTCCGAACGGCAATGCTATTTGG
TCCACCGGTGGAGTAATTTTTTATTCATTTACTCCACCAGGCAGATCTCC
GCCCGCACAGCCATAATCGATCTGAAACCAGTTGCATCGTGTCCGTACGG
CCTACAGCTATCCAGCGAGCTGCTTGAAAGGTAAGTCGGACCAGTGGCTG
TAGATATATGCTCCAACAGGGGGGGTCCGTAGGTGGGGGTCCGATTGGAG
TGTCCGATGGTGTGTACGAAGTATGATAGCTGTGAGCCGTGCCAACAGGG
CATGACGAGCTATGTGACCGGAGGTACGGCGGGAAAAGTGTCATGCACCC
CTCCTGAGATGCTGCTGAACGTGAGATACTGCTGAGCCCCCCTTTTGGAG
CATATATCTGCAGCTACTGGTACGATTTACCTTTCAAGTAGCTTGCTGGC
AGTAGTCTACGCAGGTTTTACAGTCAGCAAACATACAGGATAAAGTATGG
AATTGGCGGAATGGGGGGGGGGGGTTGGATGTTAGGGTTAGGGTTCGGGT
TAGGGTTCGGATTAGGGTTACGAACCCCCCCTCTCTATTTCTGATATAAA
GTTACTTTCTTCGCGTAGGCAGTCCCTTGCTGGATAGCTGTAGGCCGTAC
GGACACGATGCAACTGGTTTCAGATCGATTATGGCTGTGTGGGCGGAGAT
CTGCCTGGTGGAGTAAATCAAATTTACGGACACTACGTACACGGCCCTAG
GTTTGCTACAGGGAGCTGTACTGTCTCAGTAGCCTGGCTTCGCTTCGCCA
TCAAAGGAGAGGGGTGGGTGGCGACGAGCTGAAGACTGGGCTGGTTGACC
CCTTCGGCGCGATAATTTTTCTTTCCCAGACCAAGCACCCTAAGTGCAAC
GAGGGAGAAAGCGAGGAACCGGCTGGGAAGGACAGCGACGAGAGCGTGTA
CGGACGGAGCGGGTCGAGTGTGGTCGTGCTAGGACTGGCCACAGCGGCAC
CGGAGCAGCGGCACCGGAGCATGCGGACGACATGGAACCGTCGCGCACGG
ACAAACATTAGACTATGTGTTGGCAAATTGTTTCGTTTTTTTTTCCTGAA
TGTTGGTGTTGGGTTTTGTGACGACGTCACTGGATTTGTAAAGAGACGCG
GTAGACATGGCGCGGATATCCCGGGTGCCTTAAGTGTGTACCTGCGTTGT
GGAAGACCCCTTCAATGTGGAACGCTTCCTAATGAGTGTCGATGTTTACA
ATACTGTGCCTAACACAGATGTTCGGTATAGACTCGGGTAATTGTCAATT
GATGTGATGGCTTTGGTTGGCTGTTCTTTTTCACTGTGTATCCGCGGACT
GTCATTCTGGCAGCACTTCAGACAGCAGCTGCGTGCTCCATTCTTGTTCC
CACGCCTGCCGTGTGTTTTTGTACAGACAGCACTTCAGACAGCAGTTACG
CTGTAGTCGGCAAATTCATCTTGGTAAAGAGTGGGAAGAGGGGGCGGGGG
GCGGCGATGCTGCTGTAGTAGTCGAATTGAGACTGCGGGCGTGCAGTTCA
GATTCGGACACACATAACTTGCTGTGGGTATTTAAGGTGTACCTCTTCGG
GCTTGTGTACCCTTTCCCTGCTAAAAGTGTGCGTGTTCTTTAGGATTCTC
TGATGGCTCTTAGCACTTTTGTGGCCACGGGCTGTGATCTTGCTAGATTC
TAGGGATTAGCAACTGAAACGAGGTTAATGTGAAGACGACAACAACAGCA
ACAACAACAACAACAACAACAACAACAACCGGTGGACCAAATAGCATCGC
CGAAACAAAACTTTTAGGTGTTTTTGTTCTCCACCTATCCCATATTACGT
CACTGTCTGTGTATTGAACCGTTAATCCCCACCACTGAGGGGAGGTTCTT
TCTTCGATGCCGTTTTGATTTAAATTTATAAAAAAAAAAACAGACGCCCA
ATATTTGCCGTTTGCCCACTCTCTTTCCAGTTGCGAACTCCGGGTGCGCA
CTGCAATCGACGATCCGTACAGGATGAAACGAAAACAAGAAACAAGAGAC
ACACCCCCAACGTGTGTGTGTCGGGGTGAGCCTGCGGGATGAGGATTTTG
TCGCAAAAGCTCGGCGCGCCGCAACGCAATGATGCAATCACTCACCAGTC
CCTCCCAAACTTGTTTACTTTTTTTTTTTCAAGAACTTTCAACAAACGCT
TCGCTTTTTTATTTTTTTTATTTTTGGTTGCCGTGGATCGCGCGGGGCAC
AGGGGTCGGCAAGTCCTGCCTCCTCCTTCGCTACAGCGACGGCCAGTTCT
CAGGGTCCTACATTTCAACCATTGG GTACGTGCGATGCAGAGGGGGGGCA
GGGGCAGGGCGCCCGCTGACAGGAAACGTGAAGTAGGGGTCGAGCCTCAA
TTTCTCATTTATTTCATGGCCACTACCGGGGGGCGTAAGGCTTTGAAAAG
GGTTTTGTGTGGGAGCCACGATCGAGCTTGTGTGGGTTTTTTTGGCCCAA
TTTTCTTCTTGTTTTTGAAGGAGAAATTGGAGCCTTTTTTTTTGCTGACG
AGAATTTTAGTTTCTCAGCAGCGGGCGGGCGCCCACTTGTCCGTATAAAT
TACACTTGTTCGACGCCAACGTTTCTTGCTATAAAATTAAAAATTAGAGA
CGAAGCACGGCCTAAGCGAACTTTTCCTCAACGACCGCCTCTGATTGGGT
GTGGCCTTCTATCGTCTCTGTCGGTGTTTTCCTGGAACTTCTTTGTGTGC
TCCTTGTCCTTATCCTTGCCCCCCTGCAGGATTGACTTCAAGATCAAAAC
TGCGCTGTTGATGGGACGGAAAGTGAAGCTTCAAATTTGGGACACCGCCG
GACAGGAGCGATTTCGGAACATCACATCAG GTGAGATTCTTTCGGAGGAA
ATCACGTGAAATCACGTGCACACATGTTTGTCAAAGAAGAGCCGCCCATT
TAAGAAGTCAGAAAGGTGGGGTCTTGGGGTGTGTGCCGTGTATGTATATA
CAGTGGGGTGCCCTCTATAGTGCGGGTGCCCGCCATGGTGCGGGTGAAAT
CACTTGGCACAGCTTAGACCCCTCAATAGTGCGGGTGCCGCACTATTCGG
GGCACCCCTCTATTGTCCGGGTTCGGTCCCTCTCAAGACCCTCTATAGTG
CGGGTTCTCGCTCACGTCGCCACCCTTTGGATGAGGCAAAACCCTCTCAA
ATTTCAAGCACAAGCTCCCGCCCGACACGTTAACCCTAGAGCAAATATGT
GATGCCGGTAGTGCATGCACCCAAGCCATCGCAAACGGTTGATGCCACGG
TATAGTGCTACTGTAGGGATGTGACTGCCCTATGCATTGGTGCCCGTCTC
AGAATCTACTTTTTTTTATCTTGGCTTACGTGTGTTGATTTAATTAAGTC
CCATGCTTCACAAGGTATGTTTGGCCGTCATTGTTTCTTTTTGCGTTCAA
GCCACCCAACCCAAAATCGTGGGCGGGGTTGTCTTGGAAAGCATGATGAC
GTCGACCGTCCGGCCCAGGAAGGAGGGCATGGTGCTACTGCTGTACATCA
TTCAGTGTTTCCTTACCAGCCAGTTTGTTTTTTCTTGGAGTCTTCTCCAC
TTTCTTTTCTTTCGGATGTTGAGTCCGCTGATGGTTGCCAGCAATGACTC
CTTTGAGCATGTCAAAGGATGTGCAGCAGCGTACCGTGATAGATGCTTAG
ATTTCTCCCCGGGGAGGTGCTTCCTGTTTCTTTCTGGATGTGACCTTGAA
GCAGATGATCCATGAGAGATGGCCCCATCAAAACCTCGGGCATCAACAAT
CAACAGAGTGTCTAGCGTAACCACTTACTTGCCCCGGTAGGTCCAACAGT
AGTAGATACATTTCCGAATTTCTCTATGGGTGCGTGCGAACGAGGTGTAA
CCGATCGCGAAATAAAGGTAATGGACGGACAATCTGCCCTGGGGATGTCA
CGAAAAGTACCACCCTGGGGTTCTTAAAAAATGCTTCGGTAAATTACATA
TATTCCTAACCGTGGGAACCGTGCTTGTTGGCCGAAAAGAAAAAGGGGGG
GGGTGGAATAGCATCTACTCTAGTGATCAAGCCTTCATGGTGTATCCTGA
CCTACTTGCGCAATTGATTGATTTTACGATTGTACGCTACGTCCTATTCT
GAAACCCAGTGATGCCGCGAATAGCGCACTTTCTCGCACTATTGAGGGGT
CTGAGAAATCTCAGAAGTGCGCCTTCCCGCACTGTTCACGCCCGGAATCA
TATAAGTGCGGGTGCCCGCTGTAGCGCGGGTTTTATCGTTTGGCACATAC
CTGCACTATAGAGGGCACCCCTTTTGTATGAGACTTTTTCTGTTGAAGAT
CTCTCTGGAGGTTCACCTTTTCGAAGGGGTATGAATCTCCCACCTCCCGT
CGTCTGTCGAAGAAGTTTCCAGCGGGTTCAAAGGGTTCACACGTAGGACA
GATCAGATCGCTTTAGATCCGGCTAGCCTCAGTAGAGCGCTAGATCGGCT
TGATCTGTTGTCTGAGATCGATCTGCAGGCGTTTGAGCGAGCATACCTCT
CTTGCGTGCAGCTTACTCAAAAAGATGGAGCATGGGCAACCTGGTGGTGT
TCCGAGGACCATGAAGTTTGTTCCAGGGAGTCCTAAGTGTGTGCATGTCG
TGGCTGATGTGCGTGCGTGCAGCCTACTACCGAGGTAGCATGGGCATCCT
GCTGGTGTACGACGTGAGTGACGACAAGTCGTTCAGAAATGTGAGCAATT
GGATGCGCCAGATCGAGCTCAACGCGTCTCCGGACGTCAACATCACGCTT
GTGGGCAACAAGTGCGACGTGGGGGACGACGAACGC GTGAGAGGAAAAAA
AAGTTTTAGAGATTTCGAGAGAGAGAAAAAGAGAGAGCGGAATTCGAAAG
ATTGATTTGGAGAACGGAGATGCAAATACATTCCATGCATGGCTCAATAT
TTGGACGGTATTGCGCGCGATTGGAACTTGCCTCGGTCGGAGGGAGCGTC
AAGAATTGCCCCTTCATGCCATTTGAAGGCAAACGTTGAGAATTTAATAT
CTTGTCTCCCATTCCTTGTGTGCGTCCTACTGCTGTATCGATCTCTGTTG
TGCTCGGAAGGCGGTGTCTTTCGAGCAGGGACAGGCGTTAGCGGCCGAGC
GCGGAGAGCGGGTACGTTTTTTCGAAACAAGCGCGCGGTCGAACGTTAAC
GTAACCGAAGCGTTCGAGGGCTTGGCCACCGACGTCATTTTGAG GTCAGA
GGGGTGGGAGAGAAAGGTTAGAGAAAAGAGCCAACTGCTGTCCAGCTTAT
GTTTTAGAGGAATGGAGGGGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGATGACGATGTGCTGTTTGTTTGTCACGTTTCCCTC
TTGAGCGCAGTCGTCTACGCAGGTTTTACAGTCAGCAAACATATAGGATA
AAGTGTGGAATTGGCGGAATGGGGGGGTCGGGTGTTAGGGTTCGGGTTCG
GGTTACGGAACCCCCCTCTCTATTTCTGATATAAACGTACTTTCTTCCCG
TCGGCAGCCCCTTGAGTGAGTAGCTGCCCTGTGCAGCTCCAGCTGTCGTG
GTAGTTCCTTCCCGTGTGCGCTCATCCTAAATCTGTTAGTCTGTAACCGC
GAAATCGCTCCAATTCCTTCCGCATTCCGTCCTACATTGTGTGTACAGCA
AACCTCGCAACACGCAAACAAAAGAGTGCCACTTTTTTCACGAAGCCGGG
ATGTATGTATGCTCGCCCTTTGCCTATTTTCGGCCGGAAATCGGAACATT
TGTATTGTCAGGCTGCAATCACAAGACCAGGCCGCAATCGCAGGGGTCCC
GACGTTGAAGCTAGGCAAGGAAGAGCCAAAGAGCAAGCTGGCGGACTGCT
GCTGA TATACACCTGCAGCCTAGATTTTGGATACCGGATGTTGGGGGCTT
CGTGGTGGGATGTTCCTCTGCACTCTGCTTTTTCCACACCGCGATGTTTT
TGAGGCTTCATTTGTTCTTTTTTTTCTTTTTGTGTTGTCCGTGTTTTGTG
TCTCGGGAAAGTTCGCGTGACAGCAGAAGGCTCCCAAGCATATGAGGAAA
TATTGGCGCATCAAGTGGCCGGGCTGTGGGTTCTTCGCTGGTTGATGTCT
TGCTGCCTCGTTGAACGGGTGCATGCACCACACGGCAAGGTTTGCAGCCA
ACCGTTCGTGCGACTCGCTGAAAAGAGCACGTCAGGGGACAGCGCGCTTA
CTTGAGGGCGCGAGGCCGAAAATTCCAATTCGGTACATACACGGGCGTGC
TTCGAACGCTACGGCTGTGCATGATACTGAGTGCCCGGTGCCAATCTCGT
ACCCCCCTTTTGGCACGATGCTTACCACGCTCGGAATTTTCCAAGGGGAG
TCAAGGTGCTAAGGCCGAGCAATAGACTATACAACAGATTTTGTTGTGCC
GGTATTTATTGTCAAGTCTCCCACGTGAGGGTAAGTAAATTATATTCTCC
CCATGGGAAAAAAAACGAGCGTCAGAATACGGCCAGTCGGGAGGGTGGTG
ATGGTTTTGTAGCGAGTCTCGGGGGTTCACCTATACGGCACCCTGGTGTG
ATGTTCCATCAGAAGAACACGAGGCCGACTTTCTGCACGAAACAAGCACA
GCAGCCCCAGGCAAAGACTAAGGTATGGGTGGTGTGTTGTTATGTTGGAT
GCCCAATGTTTGTTTCTGTTGCACTTTTTTTCGTTGCCTCTCGTGGCTGT
CTTCGCCCCAACATTTTTTTTCATCACTTTGTTCTTGGGCAGAAGATGAG
AAAGCGGGCCGTGTGGGAACTGCTGTGCTGCTGTGTTGTTGTTGCACCCA
ATCAATCCTGTCGTAACAACTCTTGTTTTTGTTTTCGTGCGCCGAGGTCA
GTTTCCGGGGGCAACAGCTAGCAGGCCCGGTCAAGTTGCAGAATCTTGGT
TTAAGTTGTGGTAGGTCGTTGTCTGCCTGCCGAACTCGAAGAGGTGTAGA
CGAGGCCAATCACTTGCTGGATGACGCGATCATCGATCACGGTCGGAATT
CCACATGTACTTGTATTGCATGACCGGAGTTGCTTGTCGATCACACAGCC
CGAAGCTTTCTTCTCCTTATTCTCAAC back to top Coding sequence (CDS) from alignment at C-linearis_contig103:326997..336823+
>mRNA_C-linearis_contig103.839.1 ID=mRNA_C-linearis_contig103.839.1|Name=mRNA_C-linearis_contig103.839.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at C-linearis_contig103:326997..336823+ (Chordaria linearis ClinC8C monoicous) back to top