Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 2 |
| Model size | 333 |
| Cds size | 333 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927373.9054568-CDS-C-linearis_contig103:314246..314549 | 1622927373.9054568-CDS-C-linearis_contig103:314246..314549 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 314247..314549 - |
| 1690879661.8227277-CDS-C-linearis_contig103:314246..314549 | 1690879661.8227277-CDS-C-linearis_contig103:314246..314549 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 314247..314549 - |
| 1622927373.9209077-CDS-C-linearis_contig103:315209..315239 | 1622927373.9209077-CDS-C-linearis_contig103:315209..315239 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 315210..315239 - |
| 1690879661.8430836-CDS-C-linearis_contig103:315209..315239 | 1690879661.8430836-CDS-C-linearis_contig103:315209..315239 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 315210..315239 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.837.1 >prot_C-linearis_contig103.837.1 ID=prot_C-linearis_contig103.837.1|Name=mRNA_C-linearis_contig103.837.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=111bp
SRIRKRFTLKKPLSSRAGNAETGASAASAAAAAEATVAAHNADFAAKSSI
NNPSSRTASASGAAPANGGGGDPGRDGGGGGGGGWGSILGAPQMLPPSSL
PSSHAHVRNAG back to topmRNA from alignment at C-linearis_contig103:314247..315239- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig103.837.1 ID=mRNA_C-linearis_contig103.837.1|Name=mRNA_C-linearis_contig103.837.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=993bp|location=Sequence derived from alignment at C-linearis_contig103:314247..315239- (Chordaria linearis ClinC8C monoicous)
TCGAGAATTCGGAAGCGATTCACTCTTAAGGTGAGCGGGGTCAAGTTAAG
TTGTCGGGCGGGTTTGTGACGGGGGGACCAGGATTTTGGGCGTGAAAAGG
ATCGGCCGTATTTTTGCGGTGAGCGCCAGATTGACCCCCGCGTGGCTTTG
TTGTTGTGTGTCCAAACGGCTTTTGTGACTGCCGATATGGGGTTGTCGGG
ATTTCCCTTGGGGGTGGTATGGCGTTACCGCGGTGCTTTTTCTGCCGTGG
GGTTTCTCCGAGGTGGTTCGTAGACACTCAACCAGCGGGTTAACGCTTGT
TGAGCACGCTGTCCCCCTGAAAAGTATTAAAACACATCTTGACCGGAGGT
ATATTAAAGAAAATGACGGGGTGCGGCCGCCGGCAGCGATGGGGGCCTAA
AGGGCAGAAGGTTAGGGTTAAGGCAACCGAGATGTAAATGTGTGCTTTAT
ATTGACGCTTAGGGAGCGGTGGTTGCTGTGGCGGTGGAGGTGACTCTAGC
CGCGTCCTGAGGTCCATTCTCAAGGGTCAGAAAAAATCCAGAAAAAATCG
GACGGGGTTGATGGGCGATTCCAGGCTGGGCGAGGGAACTTACGAAGGGG
GCACACTGAGGGTCCATGGCTTTTTTCTCGGAAAATACTCCAACGCCCCC
GGGGTCCCCTCTACCCGCGTCCCCCCCCCCCGTAACCCAGAAACCACTCT
CGAGCCGTGCGGGCAACGCAGAAACGGGGGCGTCAGCGGCCTCGGCGGCA
GCGGCAGCCGAAGCGACCGTGGCCGCCCACAACGCGGACTTCGCCGCCAA
GAGCAGTATCAACAACCCAAGCAGCAGGACTGCGTCGGCATCAGGAGCGG
CACCCGCAAACGGCGGTGGCGGTGATCCCGGCAGGGACGGCGGCGGCGGG
GGCGGCGGCGGCTGGGGCAGCATCCTGGGGGCCCCACAGATGCTACCCCC
GTCTTCGCTTCCCTCTTCCCACGCTCACGTGCGCAACGCCGGA back to topCoding sequence (CDS) from alignment at C-linearis_contig103:314247..315239- >mRNA_C-linearis_contig103.837.1 ID=mRNA_C-linearis_contig103.837.1|Name=mRNA_C-linearis_contig103.837.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=666bp|location=Sequence derived from alignment at C-linearis_contig103:314247..315239- (Chordaria linearis ClinC8C monoicous)
TCGAGAATTCGGAAGCGATTCACTCTTAAGTCGAGAATTCGGAAGCGATT
CACTCTTAAGAAACCACTCTCGAGCCGTGCGGGCAACGCAGAAACGGGGG
CGTCAGCGGCCTCGGCGGCAGCGGCAGCCGAAGCGACCGTGGCCGCCCAC
AACGCGGACTTCGCCGCCAAGAGCAGTATCAACAACCCAAGCAGCAGGAC
TGCGTCGGCATCAGGAGCGGCACCCGCAAACGGCGGTGGCGGTGATCCCG
GCAGGGACGGCGGCGGCGGGGGCGGCGGCGGCTGGGGCAGCATCCTGGGG
GCCCCACAGATGCTACCCCCGTCTTCGCTTCCCTCTTCCCACGCTCACGT
GCGCAACGCCGGAAAACCACTCTCGAGCCGTGCGGGCAACGCAGAAACGG
GGGCGTCAGCGGCCTCGGCGGCAGCGGCAGCCGAAGCGACCGTGGCCGCC
CACAACGCGGACTTCGCCGCCAAGAGCAGTATCAACAACCCAAGCAGCAG
GACTGCGTCGGCATCAGGAGCGGCACCCGCAAACGGCGGTGGCGGTGATC
CCGGCAGGGACGGCGGCGGCGGGGGCGGCGGCGGCTGGGGCAGCATCCTG
GGGGCCCCACAGATGCTACCCCCGTCTTCGCTTCCCTCTTCCCACGCTCA
CGTGCGCAACGCCGGA back to top
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