Homology
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A6H5LAN0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAN0_9PHAE)
HSP 1 Score: 345 bits (886), Expect = 5.230e-97
Identity = 176/211 (83.41%), Postives = 196/211 (92.89%), Query Frame = 3
Query: 24 VMGVGVAGGRGTPEGEAWLEEVEEVENAVEAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGASEAALRARMEGNSASPPRIPRSISSRQPMLRSWMRPPQGG 656
VM +G+AGGRGT EGEAWLEEVEEVENAVEA+STIAQVHSLVKSLERRVNDTY+MEELHTVA+RIRNH +LFDGTPR+FLREGDL KFTRTGRK++YRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVV+V+DKKDDSKFCIQHPKKSFT+SAKT+WNK+ WM AIS A+EAALRA++E + PPR PRS+ SRQP+ R WMRPPQGG
Sbjct: 691 VMTIGLAGGRGTAEGEAWLEEVEEVENAVEAKSTIAQVHSLVKSLERRVNDTYLMEELHTVARRIRNHKSLFDGTPRRFLREGDLTKFTRTGRKMTYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVDVQDKKDDSKFCIQHPKKSFTLSAKTVWNKRAWMTAISEAAEAALRAKLETAGSPPPRAPRSLPSRQPIPRLWMRPPQGG 901
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
D8LKD8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD8_ECTSI)
HSP 1 Score: 320 bits (820), Expect = 3.750e-89
Identity = 165/190 (86.84%), Postives = 179/190 (94.21%), Query Frame = 3
Query: 3 GVGTGDVVMGVGVAGGRGTPEGEAWLEEVEEVENAVEAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGASEAALRARMEGN 572
G G G VM +G+AGGRGT EGEAWLEEVEEVENAVEA+STIAQVHSLVKSLERRVNDTY+MEELHTVAKRIRNH +LFDGTPR+FLREGDLIKFTRTGRK+SYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVV+V+DKKDDSKFCIQHPKKSFT+SAKT+WNK+ WM AIS A+EAALRAR+E N
Sbjct: 624 GSGRGGAVMTIGLAGGRGTAEGEAWLEEVEEVENAVEAKSTIAQVHSLVKSLERRVNDTYLMEELHTVAKRIRNHGSLFDGTPRRFLREGDLIKFTRTGRKMSYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVDVQDKKDDSKFCIQHPKKSFTLSAKTVWNKRAWMTAISEAAEAALRARLETN 813
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A835ZFI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI0_9STRA)
HSP 1 Score: 129 bits (325), Expect = 1.110e-26
Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 3
Query: 111 EAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQLF-SGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGASEAALRAR 560
+AE+ IA VH V++LE+ V+ Y EEL VA+R+RN + L DG R+F+REG L+K R+GRKI+YRFFLFSD L+YAHQ F SG+W++HEQL L++++V + +D+K +F I HPKKSF VSA++ +K WM I A E +R R
Sbjct: 2115 DAEAIIASVHEQVRTLEQDVHAMYNKEELVAVARRLRNVNVL-DGV-RRFIREGTLVKVCRSGRKIAYRFFLFSDMLLYAHQAFGSGEWQVHEQLQLSMLRVEDEQDRKG-CRFHIHHPKKSFAVSAESAEDKAEWMDDIEMAVEGCVRER 2262
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
W7U6C9_9STRA (Brefeldin a-inhibited guanine nucleotide-exchange n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6C9_9STRA)
HSP 1 Score: 114 bits (285), Expect = 5.900e-22
Identity = 65/131 (49.62%), Postives = 93/131 (70.99%), Query Frame = 3
Query: 126 IAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWM 518
I +VHSLV L+ V + + EEL VAKRI + L +G+ R+FLREG+L+K R+G++ Y FFLFSDQL+Y H+ F+G++K+H+QLLL+L KV V+D+++ S F I HP+KSF V A + K+ WM
Sbjct: 1793 INEVHSLVADLKDSVQQSRLREELKAVAKRIEARAKLLEGS-RRFLREGELVKKCRSGKRKVYTFFLFSDQLLYTHRGFAGEFKVHQQLLLSLTKVSNVEDRRNCS-FQIHHPQKSFVVVADSPEMKRVWM 1921
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A7R9YDJ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDJ0_9STRA)
HSP 1 Score: 108 bits (271), Expect = 2.570e-20
Identity = 67/165 (40.61%), Postives = 100/165 (60.61%), Query Frame = 3
Query: 69 EAWLEEVEEVENAVEAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQ-LFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGASEAALRAR 560
E W E+ ++ +A +IA+VH L L+ V + EL +A+R+ + + +G PR F+REGDL+K R+G+K+ YRFFLFSDQL+Y HQ L G +K+HE+L + V+ ++D F I HPKKSFTV A T +K+ W+ ++ A E +L R
Sbjct: 1623 EPWFHEIVNSQSE-QAWDSIAKVHGLFIELKAEVEENDHRRELEALARRLDVRADILNG-PRSFIREGDLVKLCRSGKKVQYRFFLFSDQLIYTHQALVGGQFKLHERLPVC---VMRIEDLGQSHAFHIHHPKKSFTVFAPTEEDKRIWIRVLNDAIEVSLEKR 1782
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A7S2BWK4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWK4_9STRA)
HSP 1 Score: 99.0 bits (245), Expect = 2.040e-19
Identity = 61/164 (37.20%), Postives = 94/164 (57.32%), Query Frame = 3
Query: 45 GGRGTPEGEAWLEEVEEVENAVEAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALF--DGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAIS 530
G R + W +E+ A A IA + +V L R + + H+ +I N S L DG R F+ E DL+K ++G+ +SYRFFLFSDQLVY H+ FSG++K+H+QLLL++++ ++ D + + F I HP KSF V+A++ K W+ +S
Sbjct: 31 GARSGVSDQPWFLAIEQATEAT-AMDAIADLTKVVMDLRRDLEEDMENLAFHSAVAKIENGSKLLEADGKERYFVMESDLVKKCQSGKSVSYRFFLFSDQLVYTHRAFSGEYKVHKQLLLSVLRCEDIDD--NPTAFRILHPLKSFAVTAESPQAKTQWVRVLS 191
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A7S1TSV1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSV1_9STRA)
HSP 1 Score: 105 bits (262), Expect = 3.020e-19
Identity = 65/165 (39.39%), Postives = 104/165 (63.03%), Query Frame = 3
Query: 69 EAWLEEVEEVENAVEAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRTGRKISYRFFLFSDQLVYAHQ-LFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGASEAALRAR 560
E W +++ +A TIA+VH+L L+ V + EL +A+RI + L +G PR F+REGDL+K R+G+K++YRFFLF+DQL+YA Q L G +K+H QL +++++V ++ + + F + HP+KSF V A + K+ WM I+ + EAA++ R
Sbjct: 1628 EPWFQDITSAPQE-DAWDTIAKVHTLFIELKTDVQENDQRRELEQLARRIDGRAELLNG-PRTFIREGDLVKVCRSGKKVTYRFFLFNDQLLYARQTLVRGTFKLHTQLPVSVMRVDDIPN--SATSFQVNHPRKSFVVIAPSEDEKRIWMRVINDSIEAAVQKR 1788
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A7S1ZP69_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZP69_TRICV)
HSP 1 Score: 96.7 bits (239), Expect = 4.090e-18
Identity = 67/163 (41.10%), Postives = 98/163 (60.12%), Query Frame = 3
Query: 108 VEAESTIAQVHSLVKSLERRVNDTYVMEELHTVAKRIRNHSALFDGTPRKFLREGDLIK-FTRTGRKISYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVEVK------DKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGA--SEAALRARMEG 569
+EA +A+ S ++S R D+ + E+ V++RIRN L + R FLREGDL+K RTGR + Y FFLFSD LVY+H+ SGD+K+HE+L L L+K+ + + K + F IQHP+KSF A ++ + +WM I+ A E +AR+EG
Sbjct: 129 MEATDLVAEAVSDLRSSLRI--DSSLKREMGRVSRRIRNGEILLNDPTRSFLREGDLMKRCNRTGRNVRYHFFLFSDMLVYSHRSSSGDFKIHEELPLHLMKIRDHALDGSSGNSKMKASFHIQHPRKSFVAVAPSVELRNSWMQDINSAIKKEVERKARLEG 289
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
K0RXB3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXB3_THAOC)
HSP 1 Score: 89.0 bits (219), Expect = 3.470e-14
Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 3
Query: 195 LHTVAKRIRNHSALFDGTPRKFLREGDLIKFTRT-----GRKISYRFFLFSDQLVYAHQLFSGDWKMHEQLLLALVKVVEVKDKKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAI 527
+ V+K IRN L R F+REGDLIK +T GR YRFFLFSD LVY H+ GD+K+HE+L L L+K+ + + F I HP KSFTV A +K+ W+ +I
Sbjct: 1549 MQNVSKFIRNGDILLSDPTRTFVREGDLIKRHKTTTLGSGRTACYRFFLFSDVLVYGHKSSQGDYKIHEELPLKLIKITDAEGDAKQCSFRINHPNKSFTVVAANDTDKEEWIESI 1664
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Match:
A0A7S4QRS1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QRS1_9STRA)
HSP 1 Score: 82.8 bits (203), Expect = 2.800e-12
Identity = 65/158 (41.14%), Postives = 89/158 (56.33%), Query Frame = 3
Query: 120 STIAQVHSLVKSLERRVNDTYVM-EELHTVAKRIRNHSALFDGTPRKFLREGDLIKFTR-TGRKISYRFFLFSDQLVYAHQLFS-GDWKMHEQLLLALVKVVEVKD---KKDDSKFCIQHPKKSFTVSAKTLWNKKTWMAAISGA--SEAALRARMEG 569
S + QV +++ L M +++ V IRN + R F+REGDLIK + GR +YRFFLFSD LVYAH+ S GD+K+H +L L L+KVV+ KK F I HP KSF +SA KK+W+ I+ A +E +AR+EG
Sbjct: 1851 SALDQVKQMLEELHSSFEMNQEMKQDMKRVTSCIRNGEIFLNDPARFFIREGDLIKRSNHVGRSTNYRFFLFSDMLVYAHKSSSRGDYKIHGELPLHLMKVVDDNGSVGKKQMKSFFIHHPHKSFLLSAAGPEMKKSWINDITLAINNELGRKARVEG 2008
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.835.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 15
0 1 Expect = 5.23e-97 / Id = 83.41 Expect = 3.75e-89 / Id = 86.84 Expect = 1.11e-26 / Id = 51.66 Expect = 5.90e-22 / Id = 49.62 Expect = 2.57e-20 / Id = 40.61 Expect = 2.04e-19 / Id = 37.20 Expect = 3.02e-19 / Id = 39.39 Expect = 4.09e-18 / Id = 41.10 Expect = 3.47e-14 / Id = 44.83 Expect = 2.80e-12 / Id = 41.14 Sequence A0A6H5LAN0_9PHAE D8LKD8_ECTSI A0A835ZFI0_9STRA W7U6C9_9STRA A0A7R9YDJ0_9STRA A0A7S2BWK4_9STRA A0A7S1TSV1_9STRA A0A7S1ZP69_TRICV K0RXB3_THAOC A0A7S4QRS1_9STRA Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 318.5 Seed ortholog evalue 9.8e-84 Seed eggNOG ortholog 2880.D8LKD8 Preferred name YEL1 KEGG ko ko:K12494,ko:K17362,ko:K18442 KEGG Pathway ko04144,map04144 Hectar predicted targeting category other localisation GOs GO:0000139,GO:0001558,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005794,GO:0005933,GO:0005934,GO:0005935,GO:0005938,GO:0006810,GO:0006886,GO:0006887,GO:0006950,GO:0007163,GO:0008104,GO:0008150,GO:0008289,GO:0008360,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010511,GO:0010513,GO:0010562,GO:0010646,GO:0010647,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0019216,GO:0019220,GO:0019222,GO:0019899,GO:0022603,GO:0022604,GO:0023051,GO:0023052,GO:0023056,GO:0030010,GO:0030427,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0032012,GO:0032014,GO:0032153,GO:0032940,GO:0033036,GO:0033554,GO:0034613,GO:0034976,GO:0035091,GO:0040008,GO:0042886,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0045184,GO:0045834,GO:0045937,GO:0046578,GO:0046579,GO:0046889,GO:0046890,GO:0046903,GO:0046907,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051020,GO:0051056,GO:0051057,GO:0051128,GO:0051174,GO:0051179,GO:0051234,GO:0051285,GO:0051286,GO:0051523,GO:0051641,GO:0051649,GO:0051666,GO:0051716,GO:0061171,GO:0061389,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0071071,GO:0071073,GO:0071702,GO:0071705,GO:0071944,GO:0080090,GO:0098588,GO:0098772,GO:0098791,GO:0099568,GO:0099738,GO:1901981,GO:1902531,GO:1902533,GO:1903725,GO:1903727 EggNOG free text desc. regulation of ARF protein signal transduction EggNOG OGs COG5307@1,KOG0929@2759,KOG1729@1,KOG1729@2759 COG Functional cat. L Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko01004,ko04131 Exons 5 Model size 2745 Cds size 2718 Stop 0 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927373.7989764-CDS-C-linearis_contig103:279922..282098 1622927373.7989764-CDS-C-linearis_contig103:279922..282098 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 279923..282098 - 1690879661.7536862-CDS-C-linearis_contig103:279922..282098 1690879661.7536862-CDS-C-linearis_contig103:279922..282098 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 279923..282098 - 1622927373.8104882-CDS-C-linearis_contig103:282585..282728 1622927373.8104882-CDS-C-linearis_contig103:282585..282728 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 282586..282728 - 1690879661.766319-CDS-C-linearis_contig103:282585..282728 1690879661.766319-CDS-C-linearis_contig103:282585..282728 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 282586..282728 - 1622927373.8209236-CDS-C-linearis_contig103:286126..286235 1622927373.8209236-CDS-C-linearis_contig103:286126..286235 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 286127..286235 - 1690879661.77585-CDS-C-linearis_contig103:286126..286235 1690879661.77585-CDS-C-linearis_contig103:286126..286235 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 286127..286235 - 1622927373.8331-CDS-C-linearis_contig103:286502..286684 1622927373.8331-CDS-C-linearis_contig103:286502..286684 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 286503..286684 - 1690879661.786478-CDS-C-linearis_contig103:286502..286684 1690879661.786478-CDS-C-linearis_contig103:286502..286684 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 286503..286684 - 1622927373.8436224-CDS-C-linearis_contig103:286858..286966 1622927373.8436224-CDS-C-linearis_contig103:286858..286966 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 286859..286966 - 1690879661.8006508-CDS-C-linearis_contig103:286858..286966 1690879661.8006508-CDS-C-linearis_contig103:286858..286966 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 286859..286966 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927373.8615665-UTR-C-linearis_contig103:286966..286992 1622927373.8615665-UTR-C-linearis_contig103:286966..286992 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig103 286967..286992 - 1690879661.8108592-UTR-C-linearis_contig103:286966..286992 1690879661.8108592-UTR-C-linearis_contig103:286966..286992 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig103 286967..286992 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.835.1
>prot_C-linearis_contig103.835.1 ID=prot_C-linearis_contig103.835.1|Name=mRNA_C-linearis_contig103.835.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=906bp
MGVGVAGGRGTPEGEAWLEEVEEVENAVEAESTIAQVHSLVKSLERRVND back to top mRNA from alignment at C-linearis_contig103:279923..286992-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.835.1 ID=mRNA_C-linearis_contig103.835.1|Name=mRNA_C-linearis_contig103.835.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7070bp|location=Sequence derived from alignment at C-linearis_contig103:279923..286992- (Chordaria linearis ClinC8C monoicous)GTGGGGTAGGCACCGGGGACGTGGTG ATGGGGGTAGGTGTGGCAGGAGGC
CGCGGGACCCCCGAGGGAGAGGCATGGCTGGAGGAAGTCGAGGAGGTGGA
AAACGCGGTAGAGGCGGAGTCGACGATCGCGCAG GTATGATGCGCCTCTT
TAGCTGGCTGACGCGATTTCGAGGGCGTTCCCCCCCCCCCCAGTAACTAC
TAACTATTGCTGTAGCTTCGCGAAACTGTGTGTTTTTTTTTCCAACCAAC
CAACCAACCATCTCTGTTTTTTTTTTTTTTTCGTGGCTCTTGTGGGGTCT
CAAATAAGGTGCATTCGCTTGTCAAGTCCCTCGAGCGGCGAGTGAACGAC
ACGTACGTGATGGAGGAGCTGCACACGGTGGCCAAGCGCATCCGGAACCA
CAGCGCTCTGTTCGACGGCACGCCGAGGAAGTTCTTGCGGGAGGGCGACC
TCATCAAGTTCACCCGCACAGGCAGGAAGATTTCTTACCG GTGAGGGCCC
AAGCTCGTGTTTTGTTCTGACGTAACTTGTGCAAAATGACCCCCCCGCGC
GCGCGCGCCGTACAGTAGTAGCCGTCCTTGAAGTGGGGCCGCATTGATCC
GTCTGTGTGGTCCCCAACACCACGCTTTCAGGGTTTTGGGTGTGTTTGAC
GTGCCATGCCAGTAGTACCTCTTTTCATGTAATTTATGGTAATATCTTTG
TGGTGCTGTGTTGTTTTGTTTTGCGCTTCTGTTGTCCTGTCCATGGCGTC
ACTGCAGGTTCTTCCTCTTCAGCGATCAGCTTGTGTACGCGCATCAGCTG
TTCTCCGGAGATTGGAAGATGCACGAGCAGTTGCTGCTGGCGCTGGTCAA
GGTCGTGGAGGTCAAG GTGGGTGGGTACACTGCTATTAACACACACACAC
ACACACACACACACACGCCCCCATCTTTGGGTTTATTTTGGCGGCGAAGT
TGACCAAGCTCGCAGGTCCTTCCTCAGTCAAAGTAGTATAGCAACGTGGC
TGAAACGAACAAAATGCTTTTTTGCTTTTTGTCTTTGCTCTTGTTGTTGG
CTATACATGTATACAGCAGTGACCCCCGATTTGGGTTGTCCGCACAGAAA
AATCACCGCGATGCGCCTTCGCGACAAGGGAGCGATTTCGGAAACGTGTC
TCGCAAAAAGGATCGATCAAGAGGCCGGTGATGTGTTGATCACATCCAAC
ACGGACCAGTTTTGGGTATTTTTTTCGCCGGCTTTCTGCTTCGATCCGAT
TTTTACTCTTTGTTCCCGCCTCTCTCTCTCTCTCTCTCTCTCCTTTCGTC
TCTCTCTCTCTATATATATATATACTTGAAGTACATATATATAATAATAT
AGAAGTATATTATTCAAGTATGACATTTATGTCATTCATCTTTCCGCTAG
AATCGCTCCATTTCCTAAAACTTTCCCCGCGCTCGGAGGCGTGCTCTCGG
GCTCTCCCAGGCCAGCACGCCGATTCACTTGGTTTCAGAGTGCGGCCGAA
CAGCTTTGGGCGCACGAGCGGGCAGCATTTCTGAATGCGGCGAGTGCGTG
ATTTTTGTTAGCGTCGTTGCGCCATTTTTTCCGGTCAAAGTTGCGCCACG
GTGCTCTCCGCTCCGGGCCTGGTGCTGTCTGCGCTTCTCTTGGTCTCTCT
TTGTCTCTCATCCTCTCCGTTTTATCTCTGCTGGGTGGGTCACGAGTTTC
TCCCATCTACTGCTGTTTCTGGCTCTTTCTGTGCTTCTCCCGCTCTCCCG
TTCGAACTGTTCGAACCACCGGAAATCGGGATCTACGGTATCTATCTCCC
TGTCTTGTCTTTCGCGGTTTTGGCAAACGCAAACTCAGCGCGCTCAGAGG
GGTCTTACACGCTCTCCATTCCGTGTCCACAACCTTTTTTCAATCCATCT
CAGTTTCAGCACAGCAGTTTAAGTTGATGACTTCTCGCAACATTGCGTCT
ATCTCTCTTCTTTCTGTGTGCCTTCCGAATCACACATACATCTCTTTCGG
AACGGAAATCAAGAACACGAATTCAATACGTAACACATCACGGAAAAATA
TTTTAGTGCACACGGATTAGTTTTTACATGTATTGCAGTGCGCAGGCGGA
ATGAGGCGGAATAGTTATAGCTTGCGCGGTGGTCCTGTCGCCCCACAGGC
ACACTACCCCACTCTCTATACGTACACAGAAAATGGCCTCACGCAACATT
TTTGTACGTTTCAACCGCTCTCCCGCGGTCTCTGCCGAACATCGAATATT
TCCCTCTCTCTGTGTGTGTGTGTGTGTGTCGACTATGTGTGCTCTCTGTA
TTTGTTTGTGTTTCGTTTAGCTGTCAGTCGGTCTGACTGTCGGTCTGTCC
ATCTCTCTCTGTCTCTCTGTCTCTCTATTTTATTTGCTTTCTCGTCTCTC
TGCTCTCTCTCTCTGCTCAAAAGCGACTACTGCTGCTGTTTGTCACTGTC
TGTTTGACCGCACTCGGAATCGATCCAAGCGACTACTGGAAATCGGGATC
TTTTCTCGCACTCTCGCATATCGACCGATCCAGTCGCGCTGTCATACCAT
CGGCGTCTGCACCGCTTTCGGTCTCTCTCTCCTCTCTCCTCGCTGTGCTG
GCTTTGTGTGTGTCACACTTACATCTTGGCGGCGGAAGCCGCCGATAAAA
AACGCTCTCCTTCGTGTGTGTACACAAGGTTTTCGGCGGCTGACGACGCC
ACGCCCATTGGACCGATTCGGAGAGATACATACGCGTCCATTGACAGAGT
GTCGTGCCGTTTATATTAGTTAAGAGTTGAAATTTGAGGTCGTTGTTGTG
GTGTGTTAAAAATGCTGCGTCTTGGCGCGAAGTTAGTTGCCGTCTGTCTG
GATGTTAATTTCCCGAGGCTTGTGATAACACCTCTGTGATAAGCAGCGTC
ATAGGTACCTCATGCGATAAAACTTTACCATTTGATAACCCCGTGTGAGC
ATTCCGTAGTCGTTGAAAGCACACAGAATGCTATTCCACGACCCACAATA
GTGCGCGAGCACCCAAAACTACCATGAACTACACACCAACACTGAACCCG
CACAAGTGCAAACCATTAAACGCAGAATAGCGAACAGTGAAGCCGCTAGG
GCCAACCATTAACCTCAGAACTATGCGAGATGCGCAACTGCTATTGCCAG
CGTCGGCATCCTCCAATTGTTGTTTCAATGCTGTCAGTTCGTCGTTCTTG
CTTTGCTAAGACACAGACGCTGAACACGTCTTGCGCGAAGACACAGCCCC
ATACCACACAGCCCCACATTAACATGCGACGTCCTACGAAGTGCTAGAGT
GTACGGCGCAATGAATTTGCCCTACGAAGTGCTACTACTGCCAGGGACGG
CACTCTAGAGAGGGCCAATGCTGCTCTCTCTGTGAGCGCTCGAGAGAAAA
TGAAATGGTACGCTCTCGTCAAATTTACAATGTACTCCGGAGTATGTATT
AAAAAGGTTTTAAAAGGTTTATTATGCAGATTTTTGCAACAACGCTGATA
GTCTATCATACGTTTCATTTGTGTGTGTGTGTGTTGGGTTGTTGTTCTCC
CTGCCCACTTCTGAGATTACTTGTATTTTGTATGTGCATGTACTGCTGTC
CACATTTACATGTGCCGATCCACTCGCGCTCGCCTGTCATCAGCGTCTGC
ACCGCTTTCGGCCTCTCTCCTCGCTGCGCTGGCTGTGCGTGTCACACACA
TACAGCAGTATCGTGGCGGCGAAAGCCGCCGATAAAAAACGCCCTCCTCT
TCGTGTGTGCACAGGTTTTTGCACCGCTGATAGTCTACATGTATGTCATT
TTTTTGTGTGTTTTCGGTTGTCTTCCGTGTCCACTTCTGAGACTACATGT
GTATGTACTGCGGTCGACCACCACGTGCTTAGCATGCCGTGCACCACGCC
CCATGCGTCTTGGGAAGCGCCACGCCCCATGCGCCTTGGGACGCGCTTCG
CTCAGCGTGCCGGCGTAAGCCGCCGAGATCCTTGTATACTTCTATATATA
CTTCGTACTTGAAGTACTTCGTATATAGAAACATATGCGAAGTAAACATT
TAGCATTTTGTTCCGAAATCTGTTCGCTGTCACAAGGAGGTTCTCTAGAC
TGTTTACTGCCAACAGCAACCAGCAGCAACCAACAGCCCAGCAGCCCAAC
GCAAAAAGGTTCTGCGCGTCAGTAACAGCCCAGCAGCCCAACGCAAAATA
CTTCATATATATATAGAAGTATATATATACTATTGTCTCTCTCTTGGTCG
CCCCCTTACCCCAGGACAAGAAAGACGACAGCAAGTTCTGCATCCAGCAC
CCCAAGAAGTCGTTCACGGTGTCCGCCAAGACGCTCTGGAACAAGAAGAC
ATGGATGGCCGCCATCTCGGGGGCTTCGGAAGCGGCCCTAAGAGCTCGCA
TGGAAGG GTGAGGAGCGAAGCCATACTTCGTAAGAATGTCCTGCGCAGGG
CGTGAGAGAGCGAAGCAGGATGGTTGAAGCGAGGGGCCCGGTGGGGCGGG
GGGGGGGAGGGGCGTGCCGTACTCTCAACACCCAACCCTGACTACCCCCT
GACCCGTTAAGAGCTCGCATGGAAGGATGCGCGAAGCCGTTTCAGGCCCA
CCCACTTCAGAAACACCCACTTCTAAGTGAATCCCGTGACCCTACCCTGT
GCAATACAACGCGCGGGCCACTGACTGTGCCACTCCCCCCCCCCCCTCCT
GTATCCCAAAGCTCGGAAGCTGCTGCGACTTGAGGGGTCGGTCGGTCTGT
GTAGGAAACATTAGTTGGATGTATACGTGAGTCGTGGAGCGCCTATGTTG
AACCACAGAGGGCGACCACCGCATGCCTGACCCTTAAAACCATTTTCTCG
GACGCTCTTCTGTCGACCTTACCCTCTCTTGACTCGACCTGCAGCAACAG
CGCTTCACCCCCTCGGATACCGCGCTCCATCTCCAGCCGGCAGCCCATGC
TGAGGTCGTGGATGCGACCGCCTCAGGGTGGACCGCCGCAAGGCCCCGGT
AACGGCGGCAGCGGCGGCAGCGGCGGCAGCGGCGGCAGCGGCGTCAACAG
CGGCGGCGGCGGCGGCGGCATAAACAAGGGCGGAAGGCCGGCCCGCGCCT
CTTTCCAGCCGTCCGACCCACGCCCGCCGGCGGTGGTTGAGAGCACCGCC
CGCAACGGCAACGGCGGCGCTGGTGGCGGTGACGGTATCGGCGCCCTTGA
CAGCGGCCGCACCGCCAGCGCCAGCAGCATGTCGGAATCCGGCGGCGGCG
GCGGCAGCGGCTGCGGCAGCGGCAGCGGTAGCGGTGTCGGCGTTGACGGC
GTTACCCGAGTCCCGACGGAAGCGGCGGCGGCCGCGGAAGCTTCGACCCT
AACAGTGGCGGCAGCACTGGCGGCGCCTGGAGCTGGAGCTGGAGCAGGAA
GCTCCTCGAATCGGTCGGCACATAGACTCCGGGTGGACACGGAGGCGGCC
AACGCGGAGGCCAGGAAGGAGGCCAACTTCGGCGCGGTCGGGGGTGGTGA
CCGAACCACCGGGGCCCCCACCGAAGCGGCGTCCGGGGGCACCGCGGCCG
CCCGGCTGGAAGGCACGCTTGCCGCGGCGGTGGCGGCCGGCAACGAGGCC
GCGAGCATCGACAGCTCCTTCCGCTCCAAAAGAGAGCAGCAGGACTTTAA
CAGGACCGGCAGCAGCAACGCTGCCGGTAGTGCTTCGAGGTCGGCGGCGG
CGGCGGCGGCGGCCGAGGGCGTGGCGGAGAGCGCGGGCAGCGGCGGATTC
GGGGGTGACGGCGGCGACGGAATCGACGGCAGCTCTGGCCCGTGTCACCG
GCGGGGCGGCGGAGGCGGCGGCGGCTCGAGAGGCAACGCCGCGTCGCCCT
CGAGCAGCCTCGGGTCCTTCGGGGGCACTCCGATCGGCGGGCCGGGCCCC
GCCGGGTCCGGCGCGAAGCAGCAGCCGGGGACGCCGCTCTCCAGGCCGCT
CATGCAGATGCGATCCAGGCTGATGAAGCGCTGGAACTCGACGCTCGTGG
GGACCCCGGTGTCGGCGGGGGGTTGGAGCGCCGGATCGGGGTCGGGCTCG
ATGTCCATGTCTCCGCCCGGGACGAGTGCTGCGGAACCGCAGCAACAGCA
GCAACGGGGAAGCGAGTCGACCGTAGTGGACAGCAAGCAGCCGCTCGTGC
TCCCCATCGGCGGTGACAGCGGTGGTGGTAACGGTGGCGGCGGCGGCGGC
GGCGGTGGCAGCGCGTCTACCATCGACCCGCCGCCATCGCTGTCGGCCTC
CTCCCTCGGCGGCGGTCTTCGCTCTCCCCTCGAAATCCAGCCGTTGAGCT
CCGTGGGTGGGTCCTCTTCCTCTTCACGGCTCGGCATGGGCCGCACGAGG
GATCCGCCGGAGCCGTCGGCGGCCCCGCCGCCGCCGCCGCAGTACTTCTG
GGACGAGAAGCCCTCATCGCTGTCGGCCCTGGGTGGTGGCGGTGACAGGT
GGGGCGCGGCGAGCGCGAACAGCGGCACGTCTCACGGTGGCGGCGGCGGT
GAAGACAACGCAAGCAGTAGGCGGGAAAGCGACGCCGGTGGCGGTGGGTC
CCACGGGCGGAGTGCCCCATCCTCCGCGCTCCTGCTGAGCTCGTCCCGGG
GCTGGCTGAAGGGCAACAAGTCCGCGCCGCGGGCGCCCGGTTCGGCGGGG
ACCGACTCCTCCTCGTCGAGTATTCGGCGGTCCCCGATAGCCTCCTCGCC
GCCCGGTGCCGGTGTGTCCCACCAGCCGCAGAGCGCCGCCGCCACCGCCA
TCGCGAACGGTTTGTTCCACTCGGGGATCGCGCTGACCTCCCACCATCTC
CACGGTCTCGGCGGCGCCCCTGGAGGTATTCCCGCCCACGTGGGCGGCGG
CACCAGCGGCGGCGTCGGCGGCATCGTCGCGGGCGCTGCCGGCGAGCCCG
GGGACGGCGGCGGTTCGTCGTCCGCGCTGACGGCGAACACCACCGCCGCT
ACCGGTAGCGGCTCCGCGGCGAAACCGCCGCCTGTAGGGCCGCAGCCCCG
CGGCAGTAGCGGCGGCCGCTCGAGGCTCCCCCCCGACACCTCCGACCTCC
TCGATAGCGCGCTGACCGCG back to top Coding sequence (CDS) from alignment at C-linearis_contig103:279923..286992-
>mRNA_C-linearis_contig103.835.1 ID=mRNA_C-linearis_contig103.835.1|Name=mRNA_C-linearis_contig103.835.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5436bp|location=Sequence derived from alignment at C-linearis_contig103:279923..286992- (Chordaria linearis ClinC8C monoicous) back to top