Homology
BLAST of mRNA_C-linearis_contig103.834.1 vs. uniprot
Match:
D7FME8_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME8_ECTSI)
HSP 1 Score: 125 bits (315), Expect = 1.790e-27
Identity = 118/204 (57.84%), Postives = 131/204 (64.22%), Query Frame = 2
Query: 1226 GEGAMDVAAPVTCKPALEALPEPAAHDPADGDPDMSQLSQD-GVELSQASALSISHLADTMEEPLSQATHWLAVFKDSQEAWSLDDVLLSQGEEGAKSGGXXXXXXXXXXXXXXXXXDEAAIDSVEAVALAAEALSPSKQHHHQQAPGVAGAGSALSPGAAGSTPSPRVLSPSSSAA---GNTATELSPMHPPPPLLPGAAGGR 1825
G G +VA+P ALE L +PA ++P D + +SQL+Q+ GV+LSQASALSISHLAD EEPLSQAT WLAVFKDSQEAWSLDD+LLS G A+ XXXXXXXXXXXXXXXX DSV AVALAAEALSPS S LS SPR+LSP S A TA ELSPM PP PL GA R
Sbjct: 21 GGGVAEVASPAASTAALETLADPAVNEPQDVE--LSQLTQETGVDLSQASALSISHLADA-EEPLSQATQWLAVFKDSQEAWSLDDILLSPGGAEAEX---XXXXXXXXXXXXXXXXXXXXXDSVGAVALAAEALSPSXXXXXXXXXXXXXGSSTLSL-------SPRLLSPGSGAVTPNNATAAELSPMLPPAPLPSGAVVSR 211
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.834.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.79e-27 / Id = 57.84 Sequence D7FME8_ECTSI
Match Name E-value Identity Description
D7FME8_ECTSI 1.790e-27 57.84 Nudix hydrolase domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 131.3 Seed ortholog evalue 1.4e-27 Seed eggNOG ortholog 2880.D7FME8 Preferred name nudt15 KEGG rclass RC00002 KEGG ko ko:K03574,ko:K20986 KEGG Reaction R11551 KEGG Pathway ko00902,ko01110,map00902,map01110 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008413,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019177,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035539,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 EggNOG free text desc. dihydroneopterin triphosphate pyrophosphohydrolase activity EggNOG OGs 2S3YT@2759,COG1051@1 EC 3.6.1.55,3.6.1.68 COG Functional cat. F Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko01000,ko03400 Exons 7 Model size 1825 Cds size 1671 Stop 0 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927373.67487-CDS-C-linearis_contig103:267707..268037 1622927373.67487-CDS-C-linearis_contig103:267707..268037 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 267708..268037 - 1690879661.6557662-CDS-C-linearis_contig103:267707..268037 1690879661.6557662-CDS-C-linearis_contig103:267707..268037 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 267708..268037 - 1622927373.6854215-CDS-C-linearis_contig103:268673..268745 1622927373.6854215-CDS-C-linearis_contig103:268673..268745 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 268674..268745 - 1690879661.666568-CDS-C-linearis_contig103:268673..268745 1690879661.666568-CDS-C-linearis_contig103:268673..268745 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 268674..268745 - 1622927373.693995-CDS-C-linearis_contig103:268965..269070 1622927373.693995-CDS-C-linearis_contig103:268965..269070 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 268966..269070 - 1690879661.674964-CDS-C-linearis_contig103:268965..269070 1690879661.674964-CDS-C-linearis_contig103:268965..269070 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 268966..269070 - 1622927373.7061203-CDS-C-linearis_contig103:269504..269618 1622927373.7061203-CDS-C-linearis_contig103:269504..269618 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 269505..269618 - 1690879661.6842725-CDS-C-linearis_contig103:269504..269618 1690879661.6842725-CDS-C-linearis_contig103:269504..269618 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 269505..269618 - 1622927373.7162337-CDS-C-linearis_contig103:269911..270151 1622927373.7162337-CDS-C-linearis_contig103:269911..270151 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 269912..270151 - 1690879661.7015653-CDS-C-linearis_contig103:269911..270151 1690879661.7015653-CDS-C-linearis_contig103:269911..270151 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 269912..270151 - 1622927373.7246807-CDS-C-linearis_contig103:270531..271341 1622927373.7246807-CDS-C-linearis_contig103:270531..271341 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 270532..271341 - 1690879661.7184231-CDS-C-linearis_contig103:270531..271341 1690879661.7184231-CDS-C-linearis_contig103:270531..271341 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig103 270532..271341 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927373.7333038-UTR-C-linearis_contig103:271341..271370 1622927373.7333038-UTR-C-linearis_contig103:271341..271370 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig103 271342..271370 - 1690879661.7328222-UTR-C-linearis_contig103:271341..271370 1690879661.7328222-UTR-C-linearis_contig103:271341..271370 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig103 271342..271370 - 1622927373.745371-UTR-C-linearis_contig103:272925..273050 1622927373.745371-UTR-C-linearis_contig103:272925..273050 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig103 272926..273050 - 1690879661.7446802-UTR-C-linearis_contig103:272925..273050 1690879661.7446802-UTR-C-linearis_contig103:272925..273050 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig103 272926..273050 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.834.1
>prot_C-linearis_contig103.834.1 ID=prot_C-linearis_contig103.834.1|Name=mRNA_C-linearis_contig103.834.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=557bp
MKRSRAPSSVAAAAAVNSGGGGRSARGTTTAARSNSERLLPSNSSSNLAP back to top mRNA from alignment at C-linearis_contig103:267708..273050-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.834.1 ID=mRNA_C-linearis_contig103.834.1|Name=mRNA_C-linearis_contig103.834.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5343bp|location=Sequence derived from alignment at C-linearis_contig103:267708..273050- (Chordaria linearis ClinC8C monoicous)GGCATTTTGAACTCTTGTTAGAGAGTTAGAGACGACTACACGACTACTGC
TGTCTGTGTAGACAGAGAGGCTGTCGGACACCGAGACAGAGCGAAAGTAA
CGTGGCCCGCTTATAGCCTAAGGAG GTGGGTACATGAGAGGTTGAGGTTG
CATGTGAGAAGTTTTGGGATGCAGAGCGTGCAGGCAGAGCCGGGTGATGT
GGAGGATTAGCCGGGGGGGGGGGTTGGTGCATGCGCAAGTGGGTGAAGGT
TACGTACGCCCCACAACAGAGTAGACGCTAGGACCACAGGAGTGCAGCGG
GTGTGTCTTGGTAACAGCGATACGGTGGGGGTGGACAGCAGTGCAGGCGA
GGTTTGCGAGGTTTAGGTTTGTCTACTCTCCCTCTCTCCTCGCTCTCTCG
CAAAGATGGAACAAGACGGGAGGGCGCGCTCCTCCCGTGGACTCCAGCAC
ACAATCTCTGGGGCAGATCTCTGGGTGGTAGCCTACATGTATTATAGTTC
CTTCTACACAGAAGTGGACAGGGCGTTCGCTCCAGACGGGAAAGTCACCA
CCCCTATATCCTCGCTGTAGTCAAGCAAAGGAGTTTGTGGGAGAGGTGTT
TGTTGACCTTCTCCCTCCCCCACCCCCCTAGCCACAAGTGGGTTGGTTCA
TCTGGAGCTTATCTGCCATGGCTAATTGATCTACTACGTAGCAGTGCGTC
TACAACGGCTGTTGCATTGTTTGTGGCAGCGGACGTACGAAGTTTGAAAC
AGGCGCGATGGGTTGCAAAGTTTTGCGCGTCCTCTATTGCTGGATTTACA
GCAGTTGTAGCTTGTGGCGGACCACTACTTTCGGCATGACTCCATGATTT
CAATCTCCAATCAATCTACCGCATGATTTACCCCAAGACGAGTTTGCCAG
AGAGGTCTTTCAATCTGCTGCCATAACGTGGGGAAGGGCTCCGTCAAAAG
GATCAGCTCTCTCTCTCTCTCTCTCTCTTCTCTCTTTGCTGCTGTAGGTG
CGCCGTGTGGAACGACTCTGTTTTCAAATGGAGTCCACACATCGCTCGTG
TACATACAGCGTAGTATGTAGAAGCATCAACAGAGAGCTACATAGACTAG
TCTCGTAGTCTACGGAGTATGTGGGAGTGGTCTGTGCACGCCCCCCCGAG
GCAGGCACACAATATGTCACTGCCTGTAACTTCAGAACGGCGCACACCGC
ACGGAATCCTATTTTTTTTTCTCCCATTCTCCCTGCGCGGCCGCTCTGTA
TGCTTGTGCTGGGTGCCCTCCGTATGTAGTACCGCCCACCGCCCACCTGC
ACTGAAACTCGAACTGCTGTAGAGGACACGCCCTTACATCTAAAGTTGTT
TGGAGCAGAGGTCGACCGGCCACGGTCGACGGCTTTCTAGGGCGAGGTAG
TCCCATGTGTATGTGTGAGGCTTGAAGAGCAACGCAGCCTGTGGGGCACG
TATGCATGTATGCACGGCAAGCCGTTACGCGGCCTGTCCCCGTCTTTTTG
TCCGAGTTTCTCAAGACAAGAGGAGAGAGATACAGAGGGAACGGGACTGC
TGTCTGTGCCTTTTCTGTCTTCTGTACCTTCATGTTTTGATATCTTGATA
TTTTCAAGTGCCTATTTATCCTGTCTCAACTAGCATATTGCCCCGCCCCG
CCGCGCTCTGCCCTAAACTCTCGCCAGCAGAAGGTGGTTCGAGTCCCCTC
CCCCACCAC ATGAAACGCTCGAGAGCCCCGTCTTCAGTAGCAGCAGCGGC
GGCCGTAAATAGCGGCGGCGGTGGCAGGAGTGCCCGTGGGACAACCACAG
CGGCCCGGTCCAACTCCGAAAGGTTACTGCCTTCCAATTCCTCCTCGAAT
CTCGCCCCGGGGTGTCCCGCCCGCAGCACCAGCGGGGAGGAATCGCAGGC
GTCTCTCGAGGTCGACGTGGGAATGGAAGACTTCAGCCACGGCGGCGGCA
GCAACAGCCAGTCAGGGAAGCCGGCGATGAGGCGGAGGTCCTCCCGCAAC
TCCCCGGCCAGGAGCAGCACCAGCAGCACCAGCGGCAGCAGCACCAGCGG
CAGCAGCGGAAAGAAGCAGAAGACGGCCACCGCCGGCGCCACTCCTTCTC
CTCCTAACAGTAACCTCCTGAACGGATCTCCGGAGAAAGCGAAGAAAGGC
GCGTCTCGCGCCGCCGCCGCGCGATCCCCGAAATCCCAAACCACCGCCGA
AGCTAACGTCGCTTCTAACGGAGCGGGTGGAGGAGGAGGAACAGCAGCGG
CGGCAGGGGCCAAAACGCAGCGAGCGGCAGGGGGGCCCGCAAAAGGGGGC
CCTGAGAAGAGGGGTAGGGCCAGAAGCAGCGGCGACGGAGGGGACGAGGC
CGGAGGCGGGGTTGCTGCGAAGGCGGCGGACGGTGTTGTGAAGAAGGAGG
GAGGTGCGGCGGGTGGCGGGGGGTCGCCGCCCCCCAAGAAAAAGAAGAAG
TACATACGGAACCCCGAGACGCACAAGGAGTATCGGGCGAGGATGGAGGC
GGAGCTGTCGCAAGCGAGG GTGAGCGGCTCCTGTCCGGTTGCTTGGTCGT
GCTTGGGTGGGGTTTGTGTGTGTCGTGTGGTGTGGGCTTGCAGCGTTTTC
TCCCGATCGTTAATGTCAAGTGTTGGCTGCAAACGGGGTCAATGCGAAAT
GTGAGGTGTGCAGCTTGGGGGCCGTGTGTGCTTCCCCGCAATGCGGCGAA
GCACCGATCAATAGCGACGACGATGGCAAGGTGCGGCTAGACCAGCTGCT
CACCTCACCAACGTTCTCTAACCCGAATCTCAACCCTGCCCTTGATGGGT
GTCCAGAGAAAGCTGCGGCAGGGCAACACCACTTGCTAACCTCCCGTGCC
GTTTCTACCCCGTATCATATCTCCGCCCTATCCTTCAATCGATGCCCAGA
GAATGCTGGAGGAAGGGAACGCAGCGATGGTGGAGCTGGCGCGGGACTAC
AAGCGGCAGCAGGCGATGATCGAGAAGTACCGCAACGACGACACGTCGCT
GCAGAGCTTCTCTCAGCTCACGCAGTCCCAGCCCACCAAGCAGCAGCAGC
AGATGCAGCAGCATCAGCAGCTGCAGCTATTGCAGCAGTCCCCCGGCCAG
CAGCAGCAACAGTCGCAGCAGCAGCAGCAACAGCAGCAG GTGCGGTTGTG
CAGTTGGTTTCATCGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCT
GCTGCTGCTGCTGTTGCTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGCTGTCGTTGTTGCTGTCG
TTGTTGGACGTACTGTAGCGGTCCGCCTGTTTGGCGATGGTCCTTTCGGT
GAGTATTCTCCTCAACCGCGCGCCATGTCCATGGTCTTGTCTCGTTTACC
CTTCTTCGCCGACGTGGGGGGTTACGCTGCAGGTACAGCCCGCCACCCCA
GCCGGCGAGGGTGCCATGGACGTTGCAGCACCCGTAACCTGCAAGCCGGC
GCTCGAGGCCCTGCCGGAGCCTGCCGCTCACGACCCCGCGGATGGG GTAT
GGAGCAGAAAGGATGGAAGGCGTTTTTGCTCCAGAAATGTTAACATTGGA
AGATTCCGCAAGCGTTGTCTGTGGTGTAACGGCTATTGTACGGCATGCAT
GGCGATGAGTAAACCGAAGCCACATGCCGCAGAGTGAACCAAAACACCCC
TCTGGGAACCACACACCTCAGCAGCCCGTCGTGTGTCCTACGCATGGGTC
TAGCTTCTGTGTGCGATAGTGGCGCAAGCACGTGAAAACCTCGAGCAGTC
TTGACTGCTACACCGGGATTGAATTCCGTCATTTTAACATCACCGGCCGG
CAACAAAGCAAAAAGGCCAACTTTCCGGTACGGGACAAAGCTCTGTATAC
GATAAAGATGCGTGAAACAAATCTGGAATTTACCTTGTCCACACCTATGA
TACGTACATATGCGCTCTTACACCCTTCAGGACCCCGACATGAGCCAGCT
GAGCCAAGACGGCGTGGAGCTGTCGCAGGCTTCCGCTCTCTCTATCTCCC
ACCTGGCGGATACCATGGAGGAGCCCCTCTCTCAG GTAGTGACAGGGAAT
TTAAATTTGTAGATGCTGTCATGTGCAACGCGGTGATGAAGAGATAGTAT
CCCGTCGGTTGGGCTGGTGCCGATGCTGAGGTTTGCTGCTAAAGAAGCAG
GTTCCTCATGTTCCAGTTTGCTGCTTTCTGGTTCACCTCGCGATGGTCGC
GCTGTTTATTAAGCCTTTTGTGGCTCTTTCTAAAAACTTGTTGACGACTG
AGCAGGCCACCCATTGGTTAGCGGTCTTCAAGGACAGTCAGGAGGCGTGG
AGCTTGGACGACGTCTTGCTCTCCCAG GTATGGATACTATGTGCAAAAGC
CTGAAACGTCGCATGACACGCAGTGGGGACGAGTTAGATAGACACGTTTC
TCGCGTCTTTTGCTCCACCATCAGACCACACACTTGACGCAGGTAGTGAA
CCGTTCACGCGGAAGCCCACGTCAAACGCTAGCTCAAGTTTAGGCCTTTT
CTTGTTTTAACCCAACCTGAACAGGGAGGCAAGCAAGCTTCGCCTCAGCT
GCAGGATCTGGCTACAGATCAGAACGAGAGACGTAACGCACCAGAGTAAA
AGAGAGAGTGGATTTAGGACCTTGATCGATATTTGATTGTTATAATTTAA
TGCCAGAATTATTTTGAGCCTACAAATCAAACCCCCCATCCATCGTGAAG
TGCCGCTCCTCTGAGTCCTGCATTGGACGATCGGGGAGTGCCTGCCACGG
GCCGAACACGTTTTTTTCATCTTCTTGTCTTCTTCCACGCTGCCCCAAAA
GACGACAAAAACTACCCGGGACCAAATCTGGCCCCGGCCGACTGACTGCT
GGTAGGATAGCGTTCATGAGTACTTGCGCTTTTCCTTCCCGAACCATTAA
AACACGCTTGTGTCGTGGCGGCTAAAACCCCCCGCCCGAACTAACCTCGT
TGTATGGGGGCAGGGAGAGGAAGGAGCCAAGAGCGGGGGTGACGACGACG
ACGACGCCAACGAACAGGAAAAGGAAGCGGCAGAAGCAGAGGATGAGGCG
GCGATCGACTCCGTAGAAGCCGTCGCCCTCGCCGCCGAGGCCCTGTCCCC
CTCCAAACAGCACCACCACCAACAGGCCCCAGGGGTGGCGGGGGCGGGGA
GCGCGCTATCCCCGGGGGCAGCCGGGAGCACGCCATCCCCGCGCGTGCTT
TCTCCTTCTTCGTCGGCCGCTGGCAACACCGCCACCGAGCTATCACCCAT
GCACCCCCCGCCACCGCTCCTCCCGGGGGCCGCCGGTGGCCGT back to top Coding sequence (CDS) from alignment at C-linearis_contig103:267708..273050-
>mRNA_C-linearis_contig103.834.1 ID=mRNA_C-linearis_contig103.834.1|Name=mRNA_C-linearis_contig103.834.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3342bp|location=Sequence derived from alignment at C-linearis_contig103:267708..273050- (Chordaria linearis ClinC8C monoicous) back to top