mRNA_C-linearis_contig103.832.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A835Z4G8_9STRA (XRN 5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4G8_9STRA) HSP 1 Score: 1257 bits (3253), Expect = 0.000e+0 Identity = 649/1119 (58.00%), Postives = 775/1119 (69.26%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLVAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQN----ASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTMGHVPE-IEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGH----GCGGEVVAYRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCILRKEAAWSTSDTVRVVGSAPEIEDVEASSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLG-QGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTDAPM 3560
MGVPKFYRW+SERYPKINQ+VSD++L+PEFDNLYLDMNGILH CTHPNDD LS QLSERD+ LG+FHYIDRIVTHIVRP++VLYMAIDGVAPRAKMNQQRSRRFR+ KD A+ VFDSNCITPGTEFMAK+S HL+YF++KKI EDPLW+ L V FSGHEVPGEGEHKIM YIRD+R AG PNT RHCMYGQDADLILLGLV HEPHFTLLREVVNF A AKNA K+V+KTT DAQFQLLHLSVLREY+W EFT M + + ERVVDDFVF+TFLVGNDFLPHMPSLDIGEEAF+LLF IYR L P W GGYLTR+G+I+ DRLE+FL VG +ED+IF+ R EE R R+R R G + VPSE ++ EE +LQ YE AM+ +GHVPE G KD+KGRYYFEKFGITP+HT++H LR YV GL WCLA GCVSW W+FPFHYVPM+SDLTGL+ F +V F L +PFLPFEQLLGCLP ASA LP PY LM SP+SPI DFYP DF+IDMNGKRNPWEAVN+LPFIDA RL AAV E CP + L P+E +RNT G V+EY + + +SCNPEIGL+DIRQC + + P+SIE F LP S IP AGFPSL+VL + E + + +N FG+ SRY T+VL L+ P LP A LA +V+GRS ++NWPL+HEA+ AY+ GR PGSGGVD+G + L RPLQG T +FG EEA+VP+HM LW P+ DPRF ER +++ R P+ SRV CL GC G V A GKVDV+ DLRPPEPPFG A+ +V+ Y+ H CQ L ++P VFG++VG+V DPG+ D+GLNLK NGRYQLLGYSRC+LR++AAWST+DTVR+VGSA E E +WEF+ A +L+ Y +PQ+F L R ++A L G G+ + ++ WL L TAGL R PLTT+A+S+DA++AVER ADVRQAV+V I K K + S+LL + + TDAP+
Sbjct: 1 MGVPKFYRWLSERYPKINQIVSDTSLIPEFDNLYLDMNGILHGCTHPNDDSLSKQLSERDVFLGVFHYIDRIVTHIVRPRRVLYMAIDGVAPRAKMNQQRSRRFRSAKDAAAARAEXXXXXXXXXXXXVFDSNCITPGTEFMAKVSAHLKYFIRKKIKEDPLWQRLTVIFSGHEVPGEGEHKIMQYIRDQRCAGAFAPNT-RHCMYGQDADLILLGLVAHEPHFTLLREVVNFNNGRAGGARGAKNAVKLVMKTTADAQFQLLHLSVLREYLWVEFTLGMSAATASALSLERVVDDFVFITFLVGNDFLPHMPSLDIGEEAFALLFGIYRELAPAW-RGGYLTRDGSIEDPDRLEQFLAAVGAKEDEIFATREIEEEGMRERQR----RHGNRQNVPSEEDLDDEETRLQEAYEDAMLQVLGHVPEGSTPGQKDFKGRYYFEKFGITPVHTQVHSELRHQYVAGLQWCLA----GCVSWEWFFPFHYVPMLSDLTGLRDMFGKVSFRLSKPFLPFEQLLGCLPAASAWCLPKPYALLMTSPDSPIADFYPADFKIDMNGKRNPWEAVNLLPFIDASRLFAAVHERCPVQLLTPEERKRNTYGAVLEYTYSEHATGTVVSCNPEIGLSDIRQCVSEEKELPWSIESHTSFTSALPLGSTIPLAGFPSLNVLPIEQAEAKPIKLNVFGSESRYSTMVLTLRRPRGLPSAEQLAPRVIGRSVFVNWPLLHEAK---------------------------------------------NAYLKGRATPGSGGVDVGPIGSRLTVRPLQGTSCRDVTAY---MFGSEEADVPLHMALWQSPAPDPRFEERGAPSLDVRLPVGSRVLCLTAAGAERQARGCVGRVKALTNGKVDVVVDLRPPEPPFGAAVAAAVQDRYYPAHAVCQRLRIRPDVFGKVVGTVNADPGRYDIGLNLKANGRYQLLGYSRCVLREQAAWSTADTVRIVGSAGEDAAEEVGAWEFTEAAARLVALYMTRYPQMFAALHTLEHGRSYEAGALFGPNAGEETLAEVKAWLESLPTAGLPRTPLTTKAMSKDAIRAVERAADVRQAVIVGEGRIVKREFKGVNASELLRANTIEATDAPL 1061
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: D7FME4_ECTSI (5\'-3\' exoribonuclease 1 (Exonuclease 2) (Exonuclease II) (Exo II) (P140) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME4_ECTSI) HSP 1 Score: 1161 bits (3004), Expect = 0.000e+0 Identity = 577/648 (89.04%), Postives = 608/648 (93.83%), Query Frame = 3 Query: 1887 MNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSS--KRKTDVR--KFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAYRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCILRKEAAWSTSDTVRVVGSAPEIEDVEASSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGEKPDLGDRVVNMRAKGVPFGLWGTVVACHSHSGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAKIHTKARLQALRASA 3818
MNGKRNPWEAVNVLPFIDAYRLRAAVKELCPP AL+P+EAERNTRGQVVEY+HD +SR EMSCNPEIGLADI QCTA+SR+ PFSIEPGECF PELP D+IIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELK PPVLPPASAL+GKVLGRSAYLNWPLMHEAQVVGISD+ EEYRL+EVKG KRKT V+ F ++ AGRWRL+AAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVEREN T+EERFPL SRVTCLHGGNGHGCGGEVVA+ GKVDVLADLRPPEPPFGLAIVQSVKTAYF QHKACQ+LG+ PQVFGRIVGSV VDPG+VDL LNLKQNGRYQLLGYSRC+LR E AWSTSDTVRVVGSAP ED+EA SWEFSLEAIKLITRYARAFPQLFHGLARHGGERFF+A LLG+GGK+KME ISKWLSELETAGLQRVPLTTRALSR+AVKAVERGADVRQAVLVKNA++KKTLLK+LEPSQLLAY VADHTDAPMDTGGEKPDLGDR+VNMRAKGVPFG+WGTVVACHSHS CVEVV DEEFIGGGTLHG+CSNYRGALVPWATVAKIHTKARLQALRA A
Sbjct: 1 MNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPTALSPQEAERNTRGQVVEYFHDAFVSRKEMSCNPEIGLADIPQCTASSRIVPFSIEPGECFRPELPHDAIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKRPPVLPPASALSGKVLGRSAYLNWPLMHEAQVVGISDEKEEYRLEEVKGGGGKKRKTRVKVSTFTDEAAGRWRLKAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENVTLEERFPLGSRVTCLHGGNGHGCGGEVVAHSKGKVDVLADLRPPEPPFGLAIVQSVKTAYFPQHKACQTLGISPQVFGRIVGSVSVDPGRVDLALNLKQNGRYQLLGYSRCVLRNEPAWSTSDTVRVVGSAPVTEDMEARSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFEAEMLLGKGGKSKMEKISKWLSELETAGLQRVPLTTRALSREAVKAVERGADVRQAVLVKNAMVKKTLLKNLEPSQLLAYHVADHTDAPMDTGGEKPDLGDRIVNMRAKGVPFGVWGTVVACHSHSACVEVVFDEEFIGGGTLHGVCSNYRGALVPWATVAKIHTKARLQALRAKA 648
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A7S4RC29_9STRA (5'-3' exoribonuclease 1 n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RC29_9STRA) HSP 1 Score: 1137 bits (2942), Expect = 0.000e+0 Identity = 613/1225 (50.04%), Postives = 798/1225 (65.14%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEA---KLVAESKGEVVD-DTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFT---RDMPEEV---EADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTM------------GHVPEIEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAYRAG-KVDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIL--------RKEA--AWSTSDTVRVVGS-APEIEDVEASS-----WEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGE---KPDLGDRVVNMRAKGVPFGLWGTVVACHSH-SGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAKI 3779
MGVPKFYRWISERYPKINQV++DS LLPEFD+LYLDMNGI+H CTHP+ +S LSERD+++GI HY+DRI+T IV+P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD+ EA K + + E D FDSNCITPGTEFMA++S ++YF++KKI EDPLW++LK+ FSGHEVPGEGEHKIM +IR+ R+ PNT RHCMYGQDADLI+LGLV+HEPHFTLLRE+V+FG SR NA K V+K T+ + FQLLHLS+LREY+ EF RD ++ E D ER++DDFVF+TFLVGNDFLPHMPSLDIG+ AF LLF Y+ +P WG G YLT G I +RLE F+ +G E+DIF R E E E+ +RRK KR G+ E + S+A+IA EA+ Q Y+ A++++M G P + KD+KGRYYFEKF + P + H LR AY+EGLLWCLAYYYRGC+SWGW++P+HY PM+SDLT L+ F + F++G P PFEQL+GCLP AS+ +P Y +LM SP+SPII FYP++FE+DMNGKRNPWE VN+LPFID + L++++ + CP E L E RN G+V Y DP + + S N +IGL DI++C + + + F P L + IP GFPSL+VL + S+E V +N FG S+Y T +L LK LP A+ LA LG+S ++NWP+MHE++VV +SD E R K+K VR F E RW + Y G +PGSGGV+IG +Q+ K PLQGM+ +P G+ +K+FGKEEA++P+ M LW P+ DPRF+ER TI++RFP + L G GC G V+ G K+ V + PPEPPFGLAI +SV+ +Y S A L + P +F RI GSV DPG+ DLGLNL +LGY+R +K+A W T D+V VVGS A D E +E++ +A++L+ Y + FPQLF L ++ ERF++A + G G+A + + WL+ +ETA + R+P TT A+ AV AVER ADVR V+ K K+ ++ + P+ L TD + T P+LGDR+ N+ A GVPFG GTVV+ H SGCVEVV+D EFIGG TL G CSN+RG L WA + KI
Sbjct: 1 MGVPKFYRWISERYPKINQVITDSALLPEFDHLYLDMNGIIHGCTHPSHLDVSDVLSERDMMMGIMHYLDRIITQIVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAKDLAEAMKDKSLTSNPNEENDAHKGAFDSNCITPGTEFMARVSECIKYFIRKKIKEDPLWRNLKIIFSGHEVPGEGEHKIMQHIREMRNQPGYQPNT-RHCMYGQDADLIMLGLVSHEPHFTLLREIVDFGAGFSRNDNALKSVMKFTKQSDFQLLHLSILREYLQIEFAFGGRDGIYDLSVKEGTYDLERLIDDFVFMTFLVGNDFLPHMPSLDIGDGAFDLLFNTYKEQRPTWGDGQYLTESGCISDPERLEAFIAVIGAAENDIFEMREENEEEYTKKRRKWDKRDGKPEGL-SDAQIAAAEARKQTNYQ-AVIESMLEKNSSDGSLVDGWQPVTDPKKKDFKGRYYFEKFTMIPTDVKEHLALRKAYIEGLLWCLAYYYRGCISWGWFYPYHYGPMLSDLTNLKHVFDNINFEIGAPLKPFEQLMGCLPPASSALVPRSYRKLMSSPDSPIIQFYPDNFEVDMNGKRNPWEGVNILPFIDVHLLKSSISKYCPDEVLTADERNRNRLGKVYLYTFDPASNDMVPSFNKDIGLPDIQKCNSRVDIFEENDSTDISFRPTLVPGTQIPYPGFPSLNVLPLVSIELIPVGLNIFGMPSKYATTMLTLKPMGTLPAANDLADHFLGKSLFINWPMMHESRVVAVSDAVCEVR------KVKKKKKVRWFTPPETERWETESTTMAEQYANGARIPGSGGVNIGDIQIRFKVVPLQGMKTNPQDGSSKKLFGKEEADIPLQMALWEAPAPDPRFIERGPMTIKDRFPPKCNII-LTKGKYRGCMGSVIGVVDGEKLGVKVKVVPPEPPFGLAIARSVQESYISTADAANVLKMPPGIFSRITGSVFFDPGRYDLGLNLTYKTDLCVLGYTRRKKGNRYGKNEKKQANNVWKTGDSVLVVGSRANSSSDGEKGGREKIVFEYTPKAVRLVAAYRQKFPQLFAALCKNPRERFYEAKQVFGPNGEAMLPKVRNWLNNIETAKIPRMPSTTEAMPLTAVAAVERAADVRLTVIDKQGQTKELNIR-VPPAALYKEGSTAATDVLLATDNNVNPAPELGDRIANLCANGVPFGARGTVVSIHDQASGCVEVVMDNEFIGGSTLQGSCSNFRGKLCVWAHLLKI 1214
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A1Z5JKV0_FISSO (5'-3' exoribonuclease 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JKV0_FISSO) HSP 1 Score: 1117 bits (2889), Expect = 0.000e+0 Identity = 590/1211 (48.72%), Postives = 799/1211 (65.98%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLVAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTM-------------GHVPEIEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGEC-FLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAYRAGK-VDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCIL---RKEAA---WSTSDTVRVVGSA--PEIEDV-EASSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTDAPMDT---GGEKPDLGDRVVNMRAKGVPFGLWGTVVACH--SHSGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAKI 3779
MGVPKFYRW+SERYPKINQ++SD+ LLPEFD+LYLDMNGI+H CTHP+ +S LSERD++LGI HY+DRI+T IV+P+ +YMAIDGVAPRAK+NQQRSRRFR+ KD EA +K + VFDSNCITPGTEF+AK+S H++YF++KK+ EDPLW L V FSGH++PGEGEHKIM +IR+ RS PN +RHC+YGQDADLI+L L+THEPHFT+LREV++F + +N K V K T+++ FQLLH+S+LREY+ EF + P+ D ER +DDFVF+TFLVGNDFLPH+P+LDIG+ AF LLF +Y+ + GWG G YLT G I RLE F+ +G E DI +R +EEA + ++R+ KR G+ EE PS+AE+A E++ Q Y +M++ + G P E G KD+KGRYYFEK TPL E H LR +Y+EGL+WCLAYYY+GC+SWGW++P+HY PM+SDL + + F+E++F+LGEP PF+QL+GCLP AS+ +P PY LM SP+SPII FYP +FE+DMNGK+NPWE VN+LPFID L++ V++ CP L+ E RN+ G + Y HDPT S NP IGL DI C + V F P F P+L + + +P GFPSL+VL + S+ K +NCFG S+Y +L L P L P LA +LG+S ++NWP+MHEA+V+G+S ++ E ++ + KRK V +F + EA +WR + E +Y G G PGSGGV IG V+L LK +PLQGM+++P G+++K FG++EA+VP+ + L+ P+ DPRF+ER AT+++RFPL+S+V L G GC G V++ K V V + PPE PFGL V+ V+ +Y S +A + L + V G+I+G + + GK DLGLNLK + GY+R + RK + WS DT+ VVGS PE D E WE++ AIKL+ Y FPQLF G+ ++ E+ + AN + G G+A + I WL + E+A + R P+TT ++ R+AV VE+ A +R L K K++L+K + S L TD + E P LGDR+VN+ G+PFG GTV+ H + +GCVEVV+DEEF+GG +L G CSN+RG L WA + K+
Sbjct: 1 MGVPKFYRWLSERYPKINQIISDNALLPEFDHLYLDMNGIIHGCTHPSHMDISDVLSERDMMLGIMHYLDRIITQIVKPKVSVYMAIDGVAPRAKLNQQRSRRFRSAKDTAEA-----TKDLPASEKNVFDSNCITPGTEFLAKVSEHIQYFIRKKLKEDPLWHGLTVIFSGHDIPGEGEHKIMQHIRELRSQPGYQPN-NRHCIYGQDADLIMLSLITHEPHFTILREVIDFNF-CRQQQNTLKAVKKFTKESDFQLLHVSILREYLHIEFCHEHPQ-----YDLERTIDDFVFMTFLVGNDFLPHLPALDIGDGAFDLLFSVYKEQRAGWGEGNYLTESGDISDPHRLEVFVEAIGAVETDILEQREKEEAAYAKKKRRWDKRDGK-EEGPSDAELAAVESEKQNGY-LSMIEALMQQPNWSPENFVAGWTPVTESGQKDFKGRYYFEKLKFTPLDKEKHWALRRSYMEGLMWCLAYYYKGCISWGWFYPYHYGPMLSDLIDIPRMFAEIEFELGEPLKPFQQLMGCLPPASSALVPKPYRFLMQSPDSPIIQFYPSEFEVDMNGKKNPWEGVNLLPFIDIALLKSTVEKFCPDSKLSTAELVRNSMGTIYCYKHDPTSIETVTSPNPSIGLPDISVCHSTISVIEFDEGPSTSKFEPKLVSGTQLPYPGFPSLNVLPIASIALTKAGLNCFGVPSKYLNTILHLTELPELAPIEQLAESLLGKSVFVNWPMMHEAKVIGLSSESREIKIL----NGKRK--VSEFGKVEADKWRTDSMEMLQSYHVGNGTPGSGGVYIGPVRLRLKVQPLQGMKINPNNGSKKKYFGQQEADVPLQLCLFQAPAPDPRFIERGPATLQDRFPLNSQVV-LTKGKYRGCKGTVISIADAKNVAVNVQIIPPEIPFGLFAVREVQESYMSSLEAAKMLRMNAGVLGKIMGRLQFEQGKYDLGLNLKTADGMCVPGYTRKKVENARKAGSRQVWSAGDTLLVVGSQKLPENGDKDERIQWEYTPRAIKLVNEYRTKFPQLFSGIMKNSNEKRYDANEIFGNNGEAWLPVIRDWLDKHESAKIPRSPVTTESMPREAVTKVEKYAAIRNLALQKKGYPKESLIK-IPGSALYREGSIGATDVLLAADLNNSEAPQLGDRIVNLCVDGIPFGAKGTVIGIHEAATTGCVEVVMDEEFMGGTSLQGACSNFRGRLCLWAHLLKV 1189
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: K0STL9_THAOC (5'-3' exoribonuclease 1 n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STL9_THAOC) HSP 1 Score: 1106 bits (2861), Expect = 0.000e+0 Identity = 601/1215 (49.47%), Postives = 784/1215 (64.53%), Query Frame = 3 Query: 249 FYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLVAES----KGEVVDDTA-VFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTMGHVP----------EIEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVA-YRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRC------ILRKEA--AWSTSDTVRVVGS---APEIEDVEASS-------WEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTD---APMDTGGEKPDLGDRVVNMRAKGVPFGLWGTVVACHSHS-GCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAKI 3779
FYRW+SERYPKINQV+++ LLPEFD+LYLDMNGI+H CTHPN +S L+ERD++LGI HY+DRI+T IV+P+ ++MAIDGVAPRAK+NQQRSRRFR+ KD+ EA A+ G D A FDSNCITPGTEF+ +IS +RYF++KKI EDPLW++L V FSG EVPGEGEHKIM +IRD R+ PNT RHCMYGQDADLI+LGLV+HEPHFTLLRE+++F R NA K V K T+ + FQLLHLS+LREY+ EF + ++ D ER++DDFVF+TFLVGNDFLPHMP+LDIG+ AF+LLF YR + WG+G YLT G I + RLE FL +G E +IF ERA+ E R ++R+ KR G++ +PS+ EIA EA Q Y + M V ++ + KD+KGRYY+EK + P+ H LR +Y+EGL+WCLAYYYRGC+SWGW+FP+HY PMISDLT L F ++F++G+P PFEQL+GCLP AS+ +P Y +LM SPESPI +YP F +DMNGKRNPWE VN+LPFIDA RL+ A+K+ CP L +E RN GQV Y +D + SCN +IGL +I +C + S E F PEL + IP GFPSL+VL + VE R +NCFG AS+Y +L + + P LP A LA ++G+S Y+NWP+MHEA+VV ++D E R+ K+K R+ E RW + + Y+ G G PGSGGV IG VQ+ LK PLQGM+ P G+ +K+FGKEEA++P+ M L S P+ DPRF+ER ++++RFP +V L G GC G V++ KV V + PPEPPFGLAI +SV +Y S A + L + P+VFGR+ G++ PGK DLGLNLK R +LGY+R +K+ AWS DTV VVGS + ED +++ WEF+ +A++L+ Y AFP LF LAR ERF+ A + G G+ + +WL ETA + R+P T A+ AV AV+R ADVR A + K+ ++K++ +K + + L TD A ++ P+LGDRV N+ A GVPFG GTVVA H S GCVEVV+DEEFIGG TL G C+N+RG L W + KI
Sbjct: 63 FYRWLSERYPKINQVITNEALLPEFDHLYLDMNGIIHGCTHPNHLDVSDVLTERDMVLGIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSAKDLAEATKEAQRLRPIDGADPDPYAGAFDSNCITPGTEFLLRISNCIRYFIRKKIKEDPLWRNLSVIFSGPEVPGEGEHKIMQHIRDMRNQLGYRPNT-RHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSGGFGRNDNALKEVKKFTKQSDFQLLHLSILREYLEIEFAY---QHDQSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYREQRARWGNGQYLTDSGEIPNPARLEAFLKVIGAAETEIFEERAKNEVVMRKKQRRWDKRDGKSS-MPSDLEIAEVEASKQSDYNAMVRSMMADVSSGTQVVEGWKQVGESEKDHKGRYYYEKLQLKPVDIAGHLALRKSYIEGLIWCLAYYYRGCISWGWFFPYHYGPMISDLTNLPAVFQSIRFEIGQPLKPFEQLMGCLPPASSALVPRIYRQLMSSPESPIKQYYPNSFVVDMNGKRNPWEGVNILPFIDANRLKDAIKDNCPDRLLTAEERNRNRVGQVFCYSYDEACNDTIPSCNRDIGLPNIEKCHSRVITIDNSSESTVSFSPELIPGTKIPYPGFPSLNVLPIERVELRNAGLNCFGFASKYPNTILTMHTLPQLPSAEQLAANLIGKSIYVNWPMMHEAKVVAVTDSKSEVRM------VKKKLKTRRHGLQEVERWNAISEKMVEQYLAGAGYPGSGGVQIGDVQIRLKILPLQGMKASPLDGSSKKLFGKEEADLPLQMALASSPAPDPRFIERGPKSLKDRFPSKCKVV-LTKGKYRGCIGTVLSTLDKDKVGVKVSVIPPEPPFGLAIARSVGESYISSGDAARVLKMNPKVFGRVTGNLFFSPGKYDLGLNLKYRDRRYVLGYTRIKQDPNEAKKKKTSNAWSAGDTVLVVGSKRMSASDEDFDSAGEEKKRTIWEFTPKAVRLVAAYKNAFPHLFAALARDPDERFYDAKKVFGPKGEETCARVLQWLKATETAAMPRLPDKTEAMPVAAVHAVQRAADVRSASVRKDGVVKESNVK-IPAAALYRESSTAATDVLLASENSVSAPPELGDRVANLCASGVPFGARGTVVAIHDPSEGCVEVVMDEEFIGGSTLQGSCANFRGKLCVWNHLLKI 1264
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A448ZS96_9STRA (5'-3' exoribonuclease 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZS96_9STRA) HSP 1 Score: 1096 bits (2835), Expect = 0.000e+0 Identity = 591/1217 (48.56%), Postives = 793/1217 (65.16%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEA-KLVAESKGEV--VDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTMGHVPEIE---------DGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAYRAGK-VDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSR--CILRK----EAAWSTSDTVRVVGSAPEIED-------VEASSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKD-----LEPSQLLAYDV---ADHTDAPMDTGGEKPDLGDRVVNMRAKGVPFGLWGTVVACH-SHSGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAKI 3779
MGVPKFYRWISERY KIN++VSDS LLPEFD+LYLDMNGI+H CTHP+ +S +SERD++LGI HY+DRI+T IV+P+ +YMAIDGVAPRAK+NQQRSRRFR+ KDM EA K + + + + + +FDSNCITPGTEFMA++S ++YF++KKI EDPLW+ LKV FSGHE+PGEGEHKIM +IR ++ PN +RHC+YGQDADLI+LGLVTHEPHFT+LREVV+FG S KNA K+V K T++A FQLLHLSVLREY++ EF +D P +D ER +DDFVF+TFLVGNDFLPH+ +LDIGE AF LLFQ+YR + WG G YLT G I + RLE +L +G E + R +A++ ++R+ +KR G + PS+AE+ + Q Y + + MG+ E G KD+KGRYYFEK +TP+ H LR AY+EGL+WCLAYYYRGC+SWGW+FP+HY PM+SDL L + F ++KF +G+P LPF+QL+ CLP ASA+ +P PY LM SPESPI FYP DFE+DMNGK+NPWE VN+LPFI+ L +K+ P + L+ E RN G + Y D T++ + + IGL DI +C + + P G F P+L + IP GFPSL+VL + S E + V CFG S+Y T+VL+L P +PP LA +L RS ++NWP+MHEA+V ISD+ E L KG K ++K+ + E +W + E Y+ G VPGSGG+ I +V++ L+ PLQGM+ +P+ G+R+K FGKEEAEVP+ + LW P+ DPRFVER T+E+RFP S V L G G G+VV GK V V PPE PFGLA+ +S+ ++ S A + L + P VFGRI S+ G DLGLNLK + + GY+R I R+ + AW T D++ V+GSA + D E WE++ +A++LI Y + FPQLF L + E+ + AN + G G + I +WL+ E+A L R+P++T+ + ++AV AVE+ D+R L K ++L+K + + A DV +DH ++ + P+LGDRVVN+ A G+PFG GTVVA H + +GCVE+V+DEEF+GG TL G+CSN+RG L WA + +I
Sbjct: 1 MGVPKFYRWISERYTKINEIVSDSALLPEFDHLYLDMNGIIHGCTHPSHMDISDVISERDMMLGIMHYLDRIITQIVKPRVSVYMAIDGVAPRAKLNQQRSRRFRSAKDMAEATKDLPKERDDAGNIKKPDLFDSNCITPGTEFMARVSETIKYFIRKKIKEDPLWRDLKVIFSGHELPGEGEHKIMEHIRMMKNEPNYQPN-NRHCIYGQDADLIMLGLVTHEPHFTILREVVDFGGGFSN-KNALKMVKKQTKEADFQLLHLSVLREYLYLEFCKDAPPGT---LDLERTIDDFVFMTFLVGNDFLPHLNTLDIGEGAFDLLFQVYRDQRSQWGEGEYLTENGNISDSARLETYLATIGNVETETLENREVTDAQYLKKKRRWNKRDG-LDAGPSDAELKAADDAKQGNYLNMIQNIMGNQENREFVDGWNPVGPGEKDFKGRYYFEKLKLTPVDVSGHHALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRNLPEMFEKIKFTVGKPILPFQQLMSCLPPASASLVPKPYRILMTSPESPIKQFYPTDFEVDMNGKKNPWEGVNLLPFIEINLLLDTIKKNAPDDMLSDAERNRNRVGDIFLYTFDATVNDTVEAPHKGIGLTDIVKCNSRVTILPQYDAEGVSFNPKLIEGTQIPYPGFPSLNVLPITSAELTPIGVKCFGFPSKYPTMVLDLHQMPDMPPVETLADNLLNRSLFINWPMMHEAKVCAISDEKGEVYL--FKGKKK----LKKWNKMEQDQWARESEEMVQNYLGGINVPGSGGIQIQQVKIRLRLLPLQGMKTNPSNGSRKKFFGKEEAEVPLQLALWQAPAPDPRFVERGPMTLEQRFPCDSSVV-LTQGKYKGNVGQVVGIADGKKVGVKVLTVPPEVPFGLALARSINESFVSSSDASRILKINPMVFGRITSSLPFIQGNYDLGLNLKSHEGLCVAGYTREKKIDREYKDEKKAWDTGDSLLVIGSARALGDSNGKDAKTERIQWEYTPKALRLINEYRQLFPQLFSALGKLSSEKKYDANKVFGPNGVEVLPKIREWLNNNESAKLPRIPISTQVMPQEAVTAVEKTTDIRNLQLRKKGFPNESLIKIPGTALFRENSVSATDVMLASDHNES------KAPELGDRVVNLCATGIPFGARGTVVAIHKATTGCVEIVMDEEFVGGTTLQGLCSNFRGKLAVWAHLMRI 1198
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A7S4EG33_9STRA (5'-3' exoribonuclease 1 n=4 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG33_9STRA) HSP 1 Score: 1080 bits (2792), Expect = 0.000e+0 Identity = 586/1216 (48.19%), Postives = 778/1216 (63.98%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEA-KLVAESKGEV--VDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTM----------GHVPEIEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAYRAGK-VDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCILRK---------EAAWSTSDTVRVVGSAPEIED-------VEASSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTDAPMDTG---GEKPDLGDRVVNMRAKGVPFGLWGTVVACH-SHSGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAKI 3779
MGVPKFYRWISERY KIN++VSDS LLPEFD+LYLDMNGI+H CTHP+ +S +SERD++LGI HY+DRI+T IV+P+ +YMAIDGVAPRAK+NQQRSRRFR+ KDM EA K + + + + + +FDSNCITPGTEFMA++S ++YF++KKI EDPLW+ LK+ FSGHE+PGEGEHKIM +IR R+ PN +RHC+YGQDADLI+LGLVTHEPHFT+LREVV+F S KNA KVV K T++A FQLLHLSVLREY++ EF +D V +D ER +DDFVF+TFLVGNDFLPH+ +LDIGE AF LLFQIY + WG G YLT G I RLE +L +G E + R +A++ ++RK +KR G +E PS+AE+ E Q Y + D M G P + G KD+KGRYYFEK +TPL E LR AY+EGL+WCLAYYYRGC+SWGW+FP+HY PM+SDL L + F +++F +G+P LPF+QL+ CLP ASA+ +P PY LM +P+SPII FYP FE+DMNGK+NPWE VN+LPFI+ L +K+ + L E RN G++ Y D T + + + IGL DI +C + + P G F PEL A + IP GFPSL+VL + S E + V CFG S+Y T++L L P +PP LA +L RS ++NWP+MHE +V ISD T E L KG K V+K+ + E +W + E Y+ G VPGSGG+ I +V++ L+ PLQGM+ + + G+ +K FGKEEAEVP+ +VLW P+ DPRF ER T+ ERFP+ S V L G GC GEVV GK V V PPE PFGLA+ +S+ ++ A + L + +FGRI S+ G DLGLNLK + + GY+R + AW + D++ V+GSA + D E WE++ +AI+LI Y + FPQLF L + GE+ + A + G+ + I +WL++ E+A L R+P+ T + R+AV AVE+ D+R L K K++L+K + + L + TD + + E P+LGDRVVN+ G+PFG GTVV H + +GCVE+V+DEEF+GG +L G+CSN+RG L WA + +I
Sbjct: 1 MGVPKFYRWISERYTKINEIVSDSALLPEFDHLYLDMNGIIHGCTHPSHMDISDVISERDMMLGIMHYLDRIITQIVKPRVSVYMAIDGVAPRAKLNQQRSRRFRSAKDMAEATKDLPKERDDSGNIKKPDLFDSNCITPGTEFMARVSETIKYFIRKKIKEDPLWRDLKIIFSGHELPGEGEHKIMEHIRMMRNEPNYQPN-NRHCIYGQDADLIMLGLVTHEPHFTILREVVDFSGGFSN-KNALKVVKKQTKEADFQLLHLSVLREYLYLEFCKDAAPGV---LDLERTIDDFVFMTFLVGNDFLPHLTTLDIGEGAFDLLFQIYMEHRSHWGEGQYLTENGNISDPARLETYLAAIGSVETETLENREVTDAKYLKKKRKWNKRDG-LDEGPSDAELKAAEDAKQGDYLSMIQDLMEKHADGPFVDGWTPP-QPGEKDFKGRYYFEKMKLTPLDLEGQYALRQAYMEGLIWCLAYYYRGCISWGWFFPYHYGPMLSDLRELPEMFEKIQFTVGKPILPFQQLMSCLPPASASLVPKPYRTLMTAPDSPIIQFYPTSFEVDMNGKKNPWEGVNLLPFIEINLLLDTIKKFASDDKLTDPERHRNRLGEIFCYTFDLTATDTVEAPHKGIGLTDIVKCNSQVTILPQYDAEGISFKPELIAGTQIPYPGFPSLNVLPITSAELAPIGVRCFGFPSKYPTMILNLHQMPEMPPVETLADNLLNRSLFINWPMMHEGKVTAISDDTTEVYL--FKGKKK----VKKWNKIEKDQWARESDEMVQNYLGGINVPGSGGIQIQEVKIRLRLLPLQGMKTNASNGSSKKYFGKEEAEVPLQLVLWQAPAPDPRFEERGPMTLHERFPVDSNVV-LTKGKYKGCVGEVVGIADGKKVGVKVLTIPPEVPFGLALARSINESFVPSADAARILKIPSMIFGRITSSLPFVQGNYDLGLNLKSSDGLCVAGYTRSKKHSWKGNGEKDFKKAWDSGDSLLVIGSARALGDNNAKGAIAERLQWEYTPKAIRLINEYRQQFPQLFSALGKLQGEKKYDAKKVFGRNEIEMLAKIREWLNKNESAKLPRIPIHTEVMPREAVTAVEKTTDIRNLQLKKKGFPKESLVK-IPGNALYRENSTSATDVMLASDHNENEAPELGDRVVNLCVSGIPFGARGTVVGIHKATTGCVEIVMDEEFVGGTSLQGLCSNFRGKLAVWAHLMRI 1201
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: W7U4G2_9STRA (5'-3' exoribonuclease 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U4G2_9STRA) HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0 Identity = 589/1246 (47.27%), Postives = 774/1246 (62.12%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLVAESKGEVVDDTAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQN-ASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFG-RAEEVPSEAEIALEEAKLQRTYEKAM------------------------VDTMGHVPEIEDGG------------------KDYKGRYYFEKFGIT-PLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGEC--FLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPV--LPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAY-RAGKVDVLADLRPPEP--PFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCILRKEAA-------WSTS-DTVRVVGSAPEIEDVEASS----WEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVK-NALIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGEKPDLGDRVVNMRAKGVPFGLWGTVVACHSHSGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATVAK 3776
MGVPKFYRW+SERY +NQV+SD +LLPEFDNLYLDMNGI+H CTHPND + LS+ +++ I++Y+DRIVT IV+PQK+LY+A+DGVAPRAKMNQQRSRRFRA KD EA+ A +G VD+ VFDSNCITPGTEFMA + HL+YF++KK+ EDPLW+ L + +SGH +PGEGEHKIM Y+RD +++ N RHCMYGQDADLI+L L THEPHFTLLREV++FG+ A +++ V+K T++A FQLLHLS+LREY+ EF RD+PEE E ++ ER+VDDFVFLTFLVGNDFLPH+PSLDI E AF LF++Y W GYLT G ID + L+ FL +G EDDI R E+ A+F RRR+T K+FG R EVPSE +A EA+ Q YE AM VD G P DGG K+++GRYYFEK G+ P + + L Y EGL WCLAYY +GCVSW W+FP+HY P+ISD+ L +KF+LGEPFLPFEQLL CLP ASA FLP Y LM +P SPI+DFYPE+F++DMNGK NPWE V ++PFID RLR A+K+ CP +L E +RN+ G+++ + H P +S SCNP + D+ + + V P S P F P L ++IP GFPSL VL + VE + + VN G+ SRY T+ L L PV LP LA +++GR Y+NWP+MHEA++ +++ G + W + +EQ AY+ GRG G GGVD+GKV++ LK R LQG+ PATG+ +KVFG EA+VP+ + +WS P+ DPRF+E+ + +R PL + V L G G G+VV Y + G+ V +L EP P GL ++ +F + ++L + +V G++ GS V+PGK DLGLNLK ++ L Y R RK A W+ + D VR+VGSA E+ + WE+S +A+ L+ Y AFP+LF L R E ++ L G A++E I WL+ TA + RVPLTT+ LSR+A++A+ER AD QA K A K + +L P ++ +D G KP+LGDRVVN+ GVPFGL GTVVA H+ + CVEV+ D+EFIGG +L G CS YRG +PW+ + K
Sbjct: 1 MGVPKFYRWLSERYVSVNQVISDLSLLPEFDNLYLDMNGIIHACTHPNDQEVCQGLSQEEMMKNIWNYVDRIVTQIVKPQKLLYVAVDGVAPRAKMNQQRSRRFRAAKDAAEAREEAGKRGVSVDEATVFDSNCITPGTEFMAVVDAHLQYFIRKKMREDPLWRRLTIIYSGHAIPGEGEHKIMQYMRDLKASPSYQANV-RHCMYGQDADLIMLALATHEPHFTLLREVIDFGRGRAGPGGSSANTVIKQTKEASFQLLHLSILREYLEFEFLRDVPEE-EREVHLERIVDDFVFLTFLVGNDFLPHLPSLDISEHAFDKLFELYGEQYRTWEGQGYLTNRGEID-IEHLQAFLDAIGAMEDDILKAREEDVADFNARRRRTQKKFGVRGAEVPSEEALAEIEAEAQSKYEMAMAVAVKKGEISKERARVLLGFAPIPVDKEGSGP---DGGGTKKGKAEQALSVPEPVKKNFRGRYYFEKLGVLDPECSPVVQDLCKRYAEGLAWCLAYYVKGCVSWKWFFPYHYGPLISDVKNLAGAVGSLKFELGEPFLPFEQLLSCLPAASAKFLPRRYQFLMTNPTSPIVDFYPEEFKVDMNGKHNPWEGVVLIPFIDETRLREAIKKYCPESSLTSDEKKRNSFGKILTFRHSPALSLTVPSCNPAL-FPDLTH--SQTTVTPSSYSPASLTSFAPCLVPGTVIPLPGFPSLKVLPIQEVEIKALKVNVNGSDSRYRTICLSL---PVTSLPAIETLAPEIVGRPVYVNWPMMHEARITAVTN-----------GKTA---------------WDVFIEKEQKAYLNGRGTVGQGGVDLGKVEMTLKVRALQGLERCPATGSTKKVFGTHEADVPIQLAMWSVPTADPRFIEQGPVPLLDRLPLGAEVVVLEEGKLKGMTGKVVGYNKGGQEQVKVELACGEPDRPIGLLARKAFGNKFFDAGEVIRALNIDGRVLGKVTGSCFVNPGKHDLGLNLKVRSKWVLPDYVR---RKAVAGAGSGKAWAAAVDVVRIVGSAETGEEGDTEPGGVPWEYSEKAVLLLRAYMDAFPRLFEELRRRPNEVNYEGQRLFGANCAAELEKIRTWLATQVTANMPRVPLTTQVLSREAIRAIERSADELQAKAKKAGAKYVKVVAVELSPEKVHCALSHKPSDVARRLAG-KPELGDRVVNLTGLGVPFGLRGTVVALHTQTACVEVLFDQEFIGGTSLQGTCSPYRGKFLPWSALLK 1204
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A6V1PVC7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PVC7_HETAK) HSP 1 Score: 984 bits (2543), Expect = 0.000e+0 Identity = 527/1077 (48.93%), Postives = 683/1077 (63.42%), Query Frame = 3 Query: 621 FDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTMGHV---PEIEDGGKDYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFS----IEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVVAY--RAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCILRKEAAWSTSDTVRVVGSAPEI--EDVEASSWEFSLEAIKLITRYARAFPQLFHGLARHGGERFFQANTLLGQGGKAKMEDISKWLSELETAGLQRVPLTTRALSRDAVKAVERGADVRQAVLVKNALIKKTLLKDLEPSQLLAYDVADHTDAPMDTGGE----------------KPDLGDRVVNMRAKGVPFGLWGTVVACHSHSGCVEVVLDEEFIGGGTLHGMCSNYRGALVPWATV 3770
FDSNCITPGT +MAK+SRHL+YFV++KI EDPLW+ L V +SG EVPGEGEHKIM YIR +R+AG P N RHCMYGQDADL++LGL+THEPHFTLLREV++FG A + ++A +K T A FQLLHLSVLREY+ EF+R+ P+ +D ER++DDFVF+TFLVGNDFLPHMPSLDIGE AF LF IYRSL WG GGYLT G + DRLE+FL +G+ ED+IF+ERA E EF+ RRR ++RFG A PSE E ++A+ + + + MG P ED G +K YY EK G+ P H + HDRLR AY+EGL+WCLAYYY GCVSWGW++P+HY P+ISDLT L++ F++VKFD G+PF PF QLLGCLP AS FLPAPY +LM SPIIDFYPEDF++D NGKRNPWEAVN+LPFIDA R+RAAV CP L +E RN G V+ Y+HDP + SCNPEIGL D+ +C ++ P + + G P ++ P G+PSL L V + +NCFG+ SRY+TLVL+L P +P A A ++LGR+ ++NWP +HEA VVG DQ R +EV D +W +E+ Y+ GRGVPG+GG D+G V L L RPLQGMR DP TG KV+G +EA+VP + L + P+ DPRF E+E + ER P+ +RV + G G G+V + V+ + R PEPPFGL I +S++ Y + ++LG++ VFG++VGSV ++PG++++GLNLK NG++QLLGYSRC+L++ AAW D V++VG+A E E+ W+FS +A +L+ Y R FPQ+FH LAR G R + A LLG + + + WL+ TA + R PL T A K LL+ + P A+++A A GG KP LG RV ++ GVPFGLWGTVVA H HS CVEVV D EF+GGG L G+C+ +RG L+PWA +
Sbjct: 7 FDSNCITPGTAWMAKVSRHLQYFVRRKIKEDPLWQRLTVIYSGMEVPGEGEHKIMNYIRHQRAAGVFPANC-RHCMYGQDADLVMLGLITHEPHFTLLREVIDFG--AFKRRSAGGPQMKQTSKAAFQLLHLSVLREYLALEFSREQPQRT---LDPERLIDDFVFMTFLVGNDFLPHMPSLDIGEHAFDRLFGIYRSLLAQWGEGGYLTDAGKLRDPDRLEQFLKCIGDMEDEIFAERAAEVEEFKSRRRGRNERFGAAPSGPSEEEEEAQKAQTRAEVHARLQEAMGAEAAPPAPEDMG--FKVAYYMEKLGLAPNHHQFHDRLRQAYIEGLIWCLAYYYEGCVSWGWFYPYHYGPLISDLTDLRRRFAQVKFDKGQPFTPFFQLLGCLPAASGKFLPAPYRKLMTEETSPIIDFYPEDFKVDANGKRNPWEAVNLLPFIDADRMRAAVAAHCPDRLLTEEERRRNRIGPVLLYHHDPANTATIPSCNPEIGLPDLLRCASSIVELPTNAFEDVAEGTLHSALRPGVTL-PLPGYPSLATLPRRGVRAEAIGLNCFGSGSRYQTLVLDLDPPAQVPTAEEAARELLGRTVFVNWPNLHEALVVGAQDQHTAAR-REVDSQGNPYVTTLGNDPDTQAKWAFLVDDERRRYLGGRGVPGTGGADVGPVALQLAVRPLQGMRQDPLTGRTHKVWGTQEAQVPYQLALRAHPAPDPRFREKEGPPLPERVPVGARVVFVRGAF-RGLSGQVEGHDVEQNTCRVVVEERDPEPPFGLNIARSIQEQYVPAPQLARALGLRGDVFGKVVGSVRIEPGRIEVGLNLKWNGQFQLLGYSRCLLKRRAAWKEGDAVKIVGTAEEDGGEEDLRGDWQFSRKAGELLVDYQRNFPQVFHALARAGHARHYSAEQLLGPRHEEVLPRLQAWLAARPTAKMPRSPLATEAXXXXXXXXXXXXXXXXXXXXXXXXXXXK-LLRGVAPD---AFELASGGGAEEGCGGAAAADAEVLPPARPPQPKPALGMRVCSLARIGVPFGLWGTVVAIHPHSACVEVVFDAEFLGGGPLGGLCAPHRGKLLPWAAL 1068
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Match: A0A7S2PSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PSP2_9STRA) HSP 1 Score: 963 bits (2489), Expect = 0.000e+0 Identity = 514/1001 (51.35%), Postives = 660/1001 (65.93%), Query Frame = 3 Query: 234 MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDGLSAQLSERDIILGIFHYIDRIVTHIVRPQKVLYMAIDGVAPRAKMNQQRSRRFRARKDMQEAKLVAESK---GEVVDD----TAVFDSNCITPGTEFMAKISRHLRYFVQKKITEDPLWKSLKVTFSGHEVPGEGEHKIMAYIRDERSAGRLPPNTSRHCMYGQDADLILLGLVTHEPHFTLLREVVNFGQNASRAKNASKVVVKTTRDAQFQLLHLSVLREYVWAEFTRDMPEEVEADMDRERVVDDFVFLTFLVGNDFLPHMPSLDIGEEAFSLLFQIYRSLKPGWGSGGYLTREGTIDSADRLEEFLTEVGEREDDIFSERAEEEAEFRGRRRKTSKRFGRAEEVPSEAEIALEEAKLQRTYEKAMVDTMGHVP----EIEDGGK--------DYKGRYYFEKFGITPLHTEIHDRLRAAYVEGLLWCLAYYYRGCVSWGWYFPFHYVPMISDLTGLQKTFSEVKFDLGEPFLPFEQLLGCLPGASANFLPAPYGRLMLSPESPIIDFYPEDFEIDMNGKRNPWEAVNVLPFIDAYRLRAAVKELCPPEALAPKEAERNTRGQVVEYYHDPTMSRLEMSCNPEIGLADIRQCTAASRVAPFSIEPGECFLPELPADSIIPSAGFPSLHVLTVGSVEERKVPVNCFGTASRYETLVLELKSPPVLPPASALAGKVLGRSAYLNWPLMHEAQVVGISDQTEEYRLKEVKGSSKRKTDVRKFAEDEAGRWRLRAAEEQGAYITGRGVPGSGGVDIGKVQLMLKARPLQGMRVDPATGARRKVFGKEEAEVPVHMVLWSCPSEDPRFVERENATIEERFPLSSRVTCLHGGNGHGCGGEVV-AYRAGKVDVLADLRPPEPPFGLAIVQSVKTAYFSQHKACQSLGVKPQVFGRIVGSVMVDPGKVDLGLNLKQNGRYQLLGYSRCI------LRKEA-AWSTSDTVRVVGS 3155
MGVPKFYRW+SERYPKINQV+++ LLPEFD+LYLDMNGI+H CTHPN +S LSERD++LGI HY+DRI+T IV+P+ ++MAIDGVAPRAK+NQQRSRRFR+ KD+ EA + K G ++D + FDSNCITPGTEF+ +IS +RYF++KKI EDP W++L V FSG +VPGEGEHKIM +IRD R+ PNT RHCMYGQDADLI+LGLV+HEPHFTLLRE+++F SR NA K V K T+ + FQLLHLS+LREY+ EF + + D ER++DDFVF+TFLVGNDFLPHMP+LDIG+ AF+LLF Y+ + WG+G YLT G I A RLE FL +G E DIF ERA+ E + ++R+ KR + PS+ E+ +E Q Y + M + E DG K D+KGRYYFEK + P + H LR +Y+EGL+WCLAYYYRGC+SWGW++P+HY PMISDLT L FS++ F++GEP PF+QL+GCLP ASA +P Y +LM SPESPI FYPEDF +DMNGKRNPWE VN+LPFID L+ + + CP AL E RN G+V Y +D ++ SCN +IGL +I +C + + F PEL + IP GFPSL+VL + VE R VNCFG S+Y ++L + + P +P A LA ++GR+ ++NWP+MHEA+VV +SD T E R + KG SK R + E RW + + Y+ G PGSGG+ IG VQ+ LK PLQGM+ P G+ +K+FGKEEA+VP+ M L+S P+ DPRFVE ++ERFP RV L G GC G V+ A KV V + PPEPPFGLAI +SV+ +Y S A + L + P+VFG+I GS+ PGK DLGLNLK + +LGY+R +K+A AWS DTV +VGS
Sbjct: 1 MGVPKFYRWLSERYPKINQVITNEALLPEFDHLYLDMNGIIHGCTHPNHLDVSDVLSERDMVLGIMHYLDRIITQIVKPKVSVFMAIDGVAPRAKLNQQRSRRFRSAKDLAEATKATKLKPLDGTDLNDADPYSGAFDSNCITPGTEFLLRISDCIRYFIRKKIKEDPQWRNLSVIFSGPDVPGEGEHKIMQHIRDMRNQPGYQPNT-RHCMYGQDADLIMLGLVSHEPHFTLLREIIDFSGGFSRNDNALKEVKKFTKQSDFQLLHLSILREYLQLEFVY---KHDPSTYDLERIIDDFVFMTFLVGNDFLPHMPTLDIGDGAFTLLFDTYKEHREKWGNGQYLTNAGEISDAARLEAFLEVIGAAESDIFEERAKNEVKMLKKQRQWDKRDKKPGRTPSDLELNAKEESKQNDYMSMVQGMMADISLKGTEAVDGWKAPTNLSEKDHKGRYYFEKLHLKPTDVDDHLALRKSYIEGLIWCLAYYYRGCISWGWFYPYHYGPMISDLTNLPDVFSKINFEIGEPLKPFQQLMGCLPPASAALVPKIYRKLMGSPESPIKQFYPEDFVVDMNGKRNPWEGVNILPFIDGNLLKQTIAKHCPDSALTADERHRNRVGKVYCYTYDAAVNDTVPSCNRDIGLPNIVKCNSRVDIIENLSVSNISFKPELVPGTKIPYPGFPSLNVLPIEHVELRNAGVNCFGFPSKYPNMILTMHTLPQMPGAVQLAENLIGRNIFVNWPMMHEAKVVAVSDSTCEVR--KPKGKSK----TRNLSPPEVERWNSMSEMMKEQYVAGASYPGSGGISIGDVQIRLKVVPLQGMKTSPIDGSSKKLFGKEEADVPLQMALFSSPAPDPRFVECGPMQLKERFPPKCRVI-LTKGKYRGCTGTVLGAVDDEKVGVKVQVIPPEPPFGLAIARSVQESYISSMDAAKVLKIDPRVFGKITGSLFFSPGKYDLGLNLKYKDKRCVLGYTRVKPDANKNKKKDANAWSAGDTVLIVGS 990 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.832.1 >prot_C-linearis_contig103.832.1 ID=prot_C-linearis_contig103.832.1|Name=mRNA_C-linearis_contig103.832.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2032bp MGVPKFYRWISERYPKINQVVSDSTLLPEFDNLYLDMNGILHTCTHPNDDback to top mRNA from alignment at C-linearis_contig103:231203..255230- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig103.832.1 ID=mRNA_C-linearis_contig103.832.1|Name=mRNA_C-linearis_contig103.832.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=24028bp|location=Sequence derived from alignment at C-linearis_contig103:231203..255230- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig103:231203..255230- >mRNA_C-linearis_contig103.832.1 ID=mRNA_C-linearis_contig103.832.1|Name=mRNA_C-linearis_contig103.832.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=12192bp|location=Sequence derived from alignment at C-linearis_contig103:231203..255230- (Chordaria linearis ClinC8C monoicous)back to top |