Homology
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A6H5L1T7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T7_9PHAE)
HSP 1 Score: 301 bits (770), Expect = 2.470e-79
Identity = 526/1055 (49.86%), Postives = 574/1055 (54.41%), Query Frame = 3
Query: 57 MANNTGMNAMSRKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLERNKEKRSGILGIEARLLGNRHASLDARAGGGMGXXXXSPTGPPPAVAGALMRAFGQGGMGAAPGAGAAPAP-----------------AWNMPLSQQGYAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----------------------------------AQGQFPQLPAP--APAGAT------------PASTASSANKVXXXXXXXXXXXXXXXXXXXXXXXXXRGDNGSLAASPEMKGAAASAGASGKAQLARK-------------ASERSAEGGXHXXXXXXXXXXXXP-GLGVKATTLGSPG---------NGDVAAAGA-RAQASYLCTPSGRTHNPYW-YHPHHXXXXXXXXXXXV----------------AEQPGRGGYIDFGAATAHGYHHPSAHGMVGSVAGFPHLGMSHPMQQHWLHQRFVAGGGGAGSATAPGQSGGLPPWQQLHQHQQQVHMPMQLAP------HSAGRPGAMMPAAXXXXXXXXXXXXXXXXXXXX------LPTGSGNMSSTN------PAATTAGF-SCSSFSSSSF---------TFPRQDSKLQXXXXXXXXXXXXXGMVGXXXXXXXXXXXXXXXXXXXXTGSGGKISFDNGNAGDSSQQPPSSALSAANTENVDGATXXXXXXXXXXXXXXXXXXXXXXXXXXDTVSSTMASPRELQRMYRKAAGV------NHRGKNGRRSRSNSHRNGNTSSTPSLA------------RSISNGRARDSSAESSMGGTTADGASSVASLSGVCSVGGSS----------GGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSESGSEEVDKMSSSLESTDDS--QATTSTSSAQPREDIDGAGGLLMGFVRSLTKQHSLDRQ 2726
MAN MNA+SRKGKWT EEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVA+QAV+ELA+LE RF+ARLERNKEKR+GILGIEARLLGNRH S+DA A GG G S V G+ M AFGQG M A AG AWN+PLS GYA A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AQ +F Q + A AG T PA+ A XXXXXXXXXXXXXXXXXXXXXX G G SPEM G ASERS + XXXXXXXXX GLG+ S G G + +AGA RAQASYLCTPSGRTHNPYW YHPHH XXXXXXXXXX G GGY+DFGAA AHGYH A G VAGFPHLGMSHPMQQ WLHQ + G H+AG+ G + XXXXXXXXXXXXXXXXXXXX +P GSG +SS+N A AGF SS SS++F T P Q + XXXXXXXXXXXXXXXXXX K+SF A + PS+++ A E+ +G XXXXX DTV STMASP ELQ+MY+KA GV N RGKNGRRS R+ S+ R SSA SSMG TTADG SSVAS+SGV S GS XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E++KM S ++ + ++S PR DIDGAGGLLMGFV +LTKQH LD+Q
Sbjct: 1 MAN---MNAISRKGKWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFQARLERNKEKRTGILGIEARLLGNRHPSIDAAAIGGDGAGGASS-----GVGGSAMHAFGQGEMVAQGAAGXXXXXXXXXXXXXXXXXXXXXXAWNIPLSP-GYATAAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQARFSQFASANTAQAGKTLASTNPNNSASLPAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPIEGGEGGSKRSPEMNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDASERSLGSDKNSSAXXXXXXXXXXXGLGIARAASVSAGLRPGPGAGPEGGIGSAGAARAQASYLCTPSGRTHNPYWSYHPHHAXXXXXXXXXXXXXXXXXXXXXGPTGAGTRGAGAGGYMDFGAAAAHGYHPSHAQG----VAGFPHLGMSHPMQQQWLHQHYAVGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHAAGQSGVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPAGSGTVSSSNGSSVGGQAKMRAGFPGSSSPSSAAFASTLPRSKGTKPNQQQPRKAVRSASSSPSSSLRPFHGGXXXXXXXXXXXXXXXXXXXXXXXKMSFARVVA---AAALPSTSVRAGGNESGNGXXXXXXXADAAAVGSAEG----------DTVPSTMASPSELQQMYKKAEGVGVSGSYNVRGKNGRRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNGSSARDMASSAGSSMGNTTADGTSSVASMSGVSSRTGSGVXXXXXXXXXXXXXXXERVSRTDSTSSSVLSGRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEIEKMGSPQQACAGEFIKIAGDSASGSPRVDIDGAGGLLMGFVETLTKQHRLDQQ 1029
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
D7FME2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME2_ECTSI)
HSP 1 Score: 214 bits (545), Expect = 5.880e-61
Identity = 106/113 (93.81%), Postives = 111/113 (98.23%), Query Frame = 3
Query: 75 MNAMSRKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLERNKEKRSGILGIE 413
MNAMSRKGKWT EEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVA+QAV+ELA+LE RF+ARLERNKEKR+GILGIE
Sbjct: 4 MNAMSRKGKWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFQARLERNKEKRTGILGIE 116
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A836CQN8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQN8_9STRA)
HSP 1 Score: 149 bits (376), Expect = 3.440e-38
Identity = 72/114 (63.16%), Postives = 93/114 (81.58%), Query Frame = 3
Query: 60 ANNTGMNAMSRKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLERNKEKRSGI 401
A+ T A R+GKW+ EEEA TARIIHYF+ GVLQLP+GTTLR +LA+KL CDPMRITKKFTG+ CLGKRVYHSCERT AT +++ ++LA+LEQRF ++LER +++R+ +
Sbjct: 8 ADETPGRAHLRRGKWSPEEEAYTARIIHYFNTGVLQLPEGTTLRVFLAEKLRCDPMRITKKFTGSACLGKRVYHSCERTPATKAEIQESKEDLANLEQRFLSQLERRRDRRASL 121
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A835Z4F5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4F5_9STRA)
HSP 1 Score: 135 bits (340), Expect = 1.060e-33
Identity = 64/92 (69.57%), Postives = 77/92 (83.70%), Query Frame = 3
Query: 90 RKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRA 365
R+GKW+ EEEA T RIIHYF+ GVLQLP+GTTLRAYLA+KL CDPMRITKKFTG++CLGKRVYHSCERT A+ + + ++L+ LE RF A
Sbjct: 2 RRGKWSSEEEAYTERIIHYFNTGVLQLPEGTTLRAYLAKKLQCDPMRITKKFTGSSCLGKRVYHSCERTPASPDEITASKEDLSQLEARFLA 93
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A6V1Q146_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q146_HETAK)
HSP 1 Score: 143 bits (361), Expect = 1.260e-33
Identity = 70/112 (62.50%), Postives = 87/112 (77.68%), Query Frame = 3
Query: 90 RKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLERNKEKRSGILGIEARLL 425
RKGKWT EEE T++IIHYF+ G+LQLP+GTTLR+YLA+KL+CDPMRITKKFTG+ CLGKRVYH + AT+ QA+DEL+ LE+RF+ RLER K+K L E +L
Sbjct: 98 RKGKWTVEEEEFTSKIIHYFNTGILQLPEGTTLRSYLAEKLNCDPMRITKKFTGSQCLGKRVYHQGDVVQATHAQVVQALDELSHLERRFKLRLEREKQKTRSDLDAETTVL 209
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A7S1UUW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UUW2_9STRA)
HSP 1 Score: 134 bits (337), Expect = 5.950e-29
Identity = 66/95 (69.47%), Postives = 76/95 (80.00%), Query Frame = 3
Query: 90 RKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLE 374
RKGKWT EEE T+RIIH+FS GVL LP+GTTLR+YLA+KL+CDPMRITKKF G +CLGKRVYH C+R+ T E A ELA LEQRFR R+E
Sbjct: 200 RKGKWTVEEEEYTSRIIHHFSTGVLTLPEGTTLRSYLAEKLNCDPMRITKKFAGASCLGKRVYHLCDRSPGTAADIEMAKAELARLEQRFRLRVE 294
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A7S1XJQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJQ1_9STRA)
HSP 1 Score: 127 bits (318), Expect = 9.540e-28
Identity = 71/160 (44.38%), Postives = 91/160 (56.88%), Query Frame = 3
Query: 21 PFIAAQGTRRAPMANNTGMNAMSRKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLERNKEKR----------SGILGIEARLLGNRHASLDARAGGGM 470
P G T + RKGKWT EEEA T R+IH F+ G+LQ+ GTTLR+YL++KL+CDPMRITKK+ G++C+GKR++ CERT E Q+ ELADLE FRA+LE ++ R G GI A +G SL GM
Sbjct: 4 PSGVGAGANPGTSVPTTAVRCHLRKGKWTAEEEAYTERVIHDFNEGLLQVAAGTTLRSYLSEKLNCDPMRITKKYAGSSCIGKRIFAPCERTPENIERGRQSAKELADLEAAFRAKLESSRSSRVPNGVGPRFNPGAKGIAAFAMGASFPSLSLSTSLGM 163
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A7S1BZD1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZD1_9STRA)
HSP 1 Score: 131 bits (330), Expect = 2.570e-27
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 3
Query: 90 RKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLE 374
RKGKWT EEE T+RIIHYFS G+L LP+GTTLR+YL++ L CDPMRITKKF G +CLGKRVY C+R+ AT E A ELA LEQRFRA+++
Sbjct: 216 RKGKWTAEEEEFTSRIIHYFSTGLLTLPEGTTLRSYLSETLSCDPMRITKKFAGASCLGKRVYRLCDRSKATANDNEMAKKELAHLEQRFRAKVQ 310
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A1E7EJF2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EJF2_9STRA)
HSP 1 Score: 122 bits (307), Expect = 3.190e-25
Identity = 66/123 (53.66%), Postives = 83/123 (67.48%), Query Frame = 3
Query: 27 IAAQGTRRAPMANNTGMNAMS-------RKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLE 374
IA+ + ++ ++TG + S RKGKWT EEE T+RII YFS G+L LPDG TLR+YLA KL+CDPMRITKKFTG CLG+R YH +R A++ E A EL LE+RFR R+E
Sbjct: 29 IASATSTKSAEIDSTGSSTSSCTASKKLRKGKWTIEEEEYTSRIIQYFSTGLLTLPDGATLRSYLADKLNCDPMRITKKFTGACCLGRRAYHLRDRPRASFAEVEMANLELLHLERRFRLRVE 151
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Match:
A0A7S1ZRG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRG3_9STRA)
HSP 1 Score: 122 bits (306), Expect = 3.420e-25
Identity = 63/106 (59.43%), Postives = 75/106 (70.75%), Query Frame = 3
Query: 90 RKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAEQAVDELADLEQRFRARLERNKEKRSGILG 407
RKGKWT EEE T++IIHYFS G+L LP+GTTLR++LA KL+CDPMRITKK+ G CLGKR YH CER T E+A EL LE RF+ R+ K S I+G
Sbjct: 366 RKGKWTLEEEEYTSKIIHYFSRGLLTLPEGTTLRSFLADKLNCDPMRITKKYAGAACLGKRAYHLCERPQVTIADIERANAELRQLEHRFQLRV---KHGTSSIMG 468
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.830.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.47e-79 / Id = 49.86 Expect = 5.88e-61 / Id = 93.81 Expect = 3.44e-38 / Id = 63.16 Expect = 1.06e-33 / Id = 69.57 Expect = 1.26e-33 / Id = 62.50 Expect = 5.95e-29 / Id = 69.47 Expect = 9.54e-28 / Id = 44.38 Expect = 2.57e-27 / Id = 66.32 Expect = 3.19e-25 / Id = 53.66 Expect = 3.42e-25 / Id = 59.43 Sequence A0A6H5L1T7_9PHAE D7FME2_ECTSI A0A836CQN8_9STRA A0A835Z4F5_9STRA A0A6V1Q146_HETAK A0A7S1UUW2_9STRA A0A7S1XJQ1_9STRA A0A7S1BZD1_9STRA A0A1E7EJF2_9STRA A0A7S1ZRG3_9STRA Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.830.1
>prot_C-linearis_contig103.830.1 ID=prot_C-linearis_contig103.830.1|Name=mRNA_C-linearis_contig103.830.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1265bp
MANNTGMNAMSRKGKWTGEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQ back to top mRNA from alignment at C-linearis_contig103:221206..228436+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.830.1 ID=mRNA_C-linearis_contig103.830.1|Name=mRNA_C-linearis_contig103.830.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7231bp|location=Sequence derived from alignment at C-linearis_contig103:221206..228436+ (Chordaria linearis ClinC8C monoicous)CGAAAGCGAAGTACATATACCCTTTCATCGCGGCGCAAGGCACACGGAGA
GCACCG ATGGCCAACAATACGGGCATGAACGCCATGTCGCGGAAGGGGAA
ATGGACG GTGCGTGCGCAGCGTGTGTGTCGGATGCGTGTGAGCGCCGGCG
GAACGGTTTCTAGGGAACGCATTTTAGTCTGGGGGAGGGCGATGAAATCC
ACGTAGTTACTGTCCTTTTCGGGAGGCACCACACCCTCTATCCGGCGCTT
GGCTGAGGAAGGATGGGCGCTGGAGTAAAGGGAAAGCCGTAAGAGGTGTC
TGGCACTCTTCCTTGCGTCGGGTAGTGCTGGTTGGCAGCCGCCCAGTGGT
GTTGTCGGCCGCTCTCGCGCTGCTTTGTGGGGGAAACGCGTGTGCTGCCT
TTTCGCCGACGTTCTTGCATGGTGTACGTACTTCGCAGTGTTGTCTCACC
CAACCCCGTCTCTTGCTCCGTTGCCTTTCGTGAAAAAATGAAAACGACAG
GGCGAAGAGGAGGCTCTCACGGCGAGAATAATCCACTATTTCAGCCTGGG
AGTGCTGCAGCTGCCGGATGGCACAACGCTGCGAGCGTACCTGGCGCAGA
AGCTCGACTGCGACCCAATGCGAATCACCAAAAAGTTCACGGGGACCAAC
TGCTTGGGGAAGAGGGTGTACCACTCCTGCGAGAGGACCACGGCAACCTA
CGAGGTCGCGGAGCAGGCGGTAGATGAGCTGGCCGACCTGGAGCAGAGGT
TTAGGGCGAGGCTGGAGCGGAATAAGGAGAAGCGCTCGGGCATTTTGGGA
ATAGAG GTGAGAGAACAAGGGATGGGTTGTTGCCCTTTTTTTGTTCAAGG
CCAGCGCAAAAAAAAAAAAAACGAAGAGGTGCGTGTTTGTTGACCCAGAA
AAAAAAAGTGAGTAATTTAGAAGGCGAAAGGGCGGTCTTACGTCTTGCCG
CGCAGGGGGAACGCCCACACCAGCGCCCGTGAGCTTGTGTTTGGATCCTT
GACGTGTGCATCTGTGCCGCCCAGTTAGGGCTCGGAGAGTTTTATGTGGT
GTTGCGTGCAGAATCGCGCTTTGTGGTTTGGTTGCTCCTGCCCGAAAACT
TCCTTTCCCACTGACCTAACTGTTGGTTTCGAAAATAACCACAAAAAAAC
TCGCTCTTTTTGCGAGCGTCCTGCGTGCGTACGTGCGTACATACTTCTTG
GGCGGACCCGGCCGAATAGAGGCTTCTCTTTTTGCCACGGGAAGCTTAAG
GCTCTGCTGTGTCGCACCAGAATTTCGCAGCAGAGACTGGTGCTGTTGGT
TTGTCGTGTGGCTGGCGGCGTGAGCACCGGAGGTTGGGGGGGGGGGTTGT
TGATTAACATAACAAACTTTCCGTGTTTTTTGTCACTTTTCTACATATGA
TATTGGTGGAGCGCGCTTCAACATGACTTTCAACATTCAACAGAATTTGC
TTGCTCTCTCTCCATGCCGCGGCTGCAAAACTACTGCTGTGCGTTCTGGA
CATTCATTTTGCGCTGCCGGCTGAATCGTGGGGTACGCATACTGAAACCT
GGCGATGGATTGTTTTAAAGACGGGGGGGGCATAAGTACTCTTTGAACTT
CTTCCAAGAAACCGCTGTCGTCCCGTTGTTGCATTTTTTTTCGTGGTGTA
GACGATGGTGTTGTAGACTAGTAAAAACACACATACATCAGTAGACACGT
ATATCTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTCT
TCACATTAAAAACCATCCCGGTCTCGTCTCTATCCAGTACCTCCTTCTGT
CTCAACCTCTCCGTACTAGTCCATCACTTGACGCGGCCAATTTCCGTGGT
CACAAGCTAACTTACCTAAAAAGGTATCATACTGAAAAATAAAACGGACC
CCAAGGGTCAGCAGAGCGATAAAATACGAGAAAAATAAAAGAACCAGGAA
GCAATAGTCTGGAGCCCTCCGCTCCCCTCTACACGCTATGTGATGCAAAA
ATAAAATATCTGCACCACCAGTAAAAACACAAACACCAAGAGCACATGCG
AGTGGAGGGTAGAACACTTAAACTGCTGTGTCATACATACATACCTGTGG
ACCGTGTCCCGAAAATGTAATGCTCTGTATGGTAGCAAGTGCCTGCTGTG
TTCTGTCTCTGTCGTAGGCACTGCACAAGATGCAGCAGCAGTAGTGATCG
CTGCCCCTTGAGCGTCAGCCACAGCAGCAGCAGCAGCAGCAGCAGCGTTT
TTGTGTTATCGTCAGAAGAGAAGAACCCACGAAGCACGAACACCAAAATC
ATGATAGCTTTTTGTTTGCTTCTGCCGTCCCCTCCTGCATTCCATGGGAC
TTTCAAGCCCCGACCGGCACCGCCTCCAGTTCGGCATATCCATACGCACA
TCTCCGCCCCCCTCCCTCTCAACCCAAAAAAACGCCTTCTCCACCCTCGG
TGCTCCTCCCCTGCTTCCTTGCCCCCTCCAGGCTAGACTTCTCGGAAACC
GGCATGCCAGCCTAGACGCACGGGCTGGCGGTGGCATGGGCGGCGGCGGT
GCTTCCCCCACCGGACCCCCCCCAGCGGTAGCGGGCGCCCTCATGCGCGC
CTTCGGGCAGGGCGGGATGGGGGCGGCGCCGGGAGCGGGGGCGGCGCCGG
CGCCGGCGTGGAACATGCCGCTCTCGCAACAAGGCTACGCGGCGGCAATG
CAGCAGCAGCAGCAGCAGCACCACCACCACCCTCGCCAACGCCACCATGC
GGCGGTGCCGGGGTACCACCACCCGCACCACCTTACCGCGGCGGCGCTGC
AGTCGCACCAGCTGCAGCAGGCCGCGGCGTTCTCGATGTCCCAGCAGCAG
CTGCAGCAGCAGAGCCCGGCGGCGGGGGGGGCAGCGCAGGGTCAGTTCCC
GCAGCTCCCCGCGCCGGCGCCGGCGGGAGCAACGCCCGCGAGCACCGCAA
GCTCGGCCAACAAGGTACCCGCGCCGGCAGCGGCGGCGGGGGAGCCACAA
TCGGCTTCGTCCTCTTCGCTGGCCGCAGCGGGAGCCGCAGCAAGAGGAGA
CAACGGATCGCTGGCCGCATCGCCGGAGATGAAGGGCGCGGCGGCATCAG
CCGGCGCCAGCGGCAAGGCGCAGCTGGCAAGGAAGGCTTCCGAGCGATCC
GCCGAGGGCGGCGGCCACAAGTCCACGCCGCCGCCGCCGCCGCCTCTCCC
CCCACCAGGCTTAGGTGTAAAGGCGACGACGCTCGGCTCGCCCGGCAACG
GCGACGTCGCCGCCGCCGGTGCTCGCGCGCAGGCCTCTTACCTGTGCACC
CCCTCCGGCCGGACGCACAACCCGTACTGGTACCACCCGCACCACGCGGC
GGTCGCGGCGGCGGCAGCGGCGGCGGCGGTGGCGGAGCAGCCTGGGCGGG
GCGGGTACATCGACTTCGGGGCCGCCACGGCCCACGGGTACCACCACCCT
TCCGCGCACGGCATGGTCGGGAGCGTGGCCGGGTTCCCGCACCTTGGGAT
GTCGCACCCCATGCAGCAGCATTGGCTGCACCAACGGTTTGTGGCCGGGG
GCGGGGGCGCAGGCAGCGCCACCGCCCCCGGTCAGAGCGGCGGCTTGCCG
CCCTGGCAGCAGCTGCACCAGCACCAGCAGCAGGTCCACATGCCGATGCA
GCTGGCGCCGCACTCGGCCGGCCGGCCGGGCGCGATGATGCCGGCAGCGG
CGGGGGGTGTTGGTGGCACCGCCGCATCGCTGGGCCAGCAGCAGCAGCAG
CAGCTGCTGCTGCCTACCGGCTCCGGAAACATGAGCAGCACCAACCCAGC
GGCCACGACGGCGGGATTCTCGTGCTCCTCCTTCTCGTCCTCGTCCTTCA
CGTTCCCGCGCCAGGACTCGAAGCTGCAGCTGCAGCCGCAGCCGCAGCAG
CAGCAGCTCCAGCCCCGGGGCATGGTCGGCGGCGGACCCGCGTCGGCCGC
CTCCAACTCGTCTTCGTCGCCCTTCTCCGGCAGCAACGGCACCGGCAGCG
GCGGCAAGATCAGCTTCGACAACGGCAACGCCGGCGATTCCTCTCAGCAG
CCCCCGTCCTCGGCCCTCTCCGCCGCCAACACCGAAAACGTCGACGGCGC
AACTCCGACGAACGGCAGCCACGGGGCCGCCGCCGGCGGCGCTTCCTCAG
CGGACGCCGCGGCCGTCGGCAGCGCTGAGCGGGACACGGTGTCCTCCACC
ATGGCCTCCCCGCGCGAGCTCCAGCGGATGTACAGGAAGGCGGCCGGGGT
CAACCACCGCGGCAAGAACGGCCGGCGCAGCCGCAGCAACAGCCACCGCA
ACGGCAACACGAGCTCGACGCCCTCCCTCGCCAGGAGCATCAGCAACGGG
CGCGCCCGCGACAGCAGCGCCGAGAGCAGCATGGGCGGCACCACGGCCGA
TGGAGCTTCCTCCGTGGCTTCACTGTCCGGAGTTTGCAGCGTCGGCGGCT
CGTCAGGAGGCGCCAGCTCCTCCACCGGCACCGGGTCCGGCGGGTCCGGG
TCCGAGGAGCGGGGTAGCGGCGGCAGCAGCAGCAGGAGGAGCGGGGGCAA
GGGCGTGGGCGCCGGTGACGCGGGCGCCGTCAGCGGTGGGACGGGGTCGT
TGGGGTGTACCTCCGGAAGCGAGAGCGGCAGCGAG GTAAGCGAGAAGGAG
ACATAAAAGACAGACCGACAGCAGTAGTACACGGCATTTTTTTTTATTAT
TATTTCTGTTCCGGGCGGGTTCATGCCATGCCCAGCTATTTATCTATTGT
TGTTTTCTCATTTTTTCCCTTGGTTGTTGCCGTGCACATCCTTGCCTACC
TTTGCGCTTTTCTTGACGTCTCCCCCGTTGTGTCGGCTTGTGCAGGAGGT
TGACAAGATGAGCTCGTCCCTCGAGTCGACGGACGACTCCCAGGCCACCA
CCAGCACCTCCTCGGCCCAGCCGCGCGAGGATATCGACGGCGCCGGCGGC
CTGCTGATGGGCTTCGTCAGGTCCCTCACGAAGCAGCACAGCCTCGACAG
GCAGCAGGCCGCGAGCGAGGCGGCGGCGGCGGCGGCGGCGAAGGAGCAGG
CGTCGTCTCCCTTGCTGCGGCTGCTGCCGCAGCCGCAGCAGCAGCAGGGA
GAAGACAAGGGCAGCGGCAAGCAGGCCGCGCCGTCCCAACAAGCACCCCA
CCAACACCAGCACCAGCAAAAGGCAAGGTCCGACAGCTCGCACGCGCACC
CCCGCCACCGCCACAAGCACGCCGCGCGGATGGACGCCGAGGCTCGCCTT
GCCGCCGCTGCTGCCGCCGCCGCCGCCGCCGGTGCAACCAGCACTAGCGG
TAGCAGCGGCGCTCCAGTAAGGGTCGCCGCCGACCCCGGCAAGAAGAAAC
GACCCGTGGGCGACGTGACCGCCCTCAAGCGGCCGCAGAAAGGAAGCAGC
GGTAACCCGGGAAAGAGCGGCGGCTCGGACGCCGGCGAGGGCGTTAGCAG
CGGCAGCAACAGCAACGGCAAGAGTAAGAGCAGCCGCGGCGTGCGCGACG
CCGTCGCTCCGCCGACCCACCCACCGTCCGTAAGCGACGGCGGCAACGTC
AGCCGCGGAGCAAGCCTCAAGCGGCGAAGAGACCAGATGACCGGCGGCAG
CGGCGACCGGGATAGCGCCGCGGCGGCGGCGGTGGCGGCGGCGGCATCCC
GCCCAATCGGCGGAAACAGCGAGCCTCCCTTCCGGCGAAGAAGAAGAGAA
AACATGGACGCCGAAGAAGAGGAGGACGAGAGCAGCAGCGACTCGGAGGA
GGGGGTCAACTTCCACTCCGAGGGAGGCGGCTACGAGGAGGAGGAAGACG
GGGGCGGCTGGGGCAGCTTCGGCAAGGACGCCGGCTCCGCGGGGTTAGGG
TCCGGCTCCACCGAGGACAGCAACGAGGCGGCAGTGTCGGACGGCGACTA
CCGCGGCGGCGACGAGCGCACCAGCTCCTTCGAGGAGAGATACGGCAGCA
ACAACGGCGGCGACGATAACATGTCCCCGATCTTGGAGAGCAAGACCAGA
GCCAGAGCGGGCGAGGCAGGGGAGAAGGAGGCGGCGGGCGGCGGGCCGGC
GGCGGGGCGCGTGCCGCCGCCGCCGCTTCCGCCGGTCGCTGCTGAACAGG
AGCAGCAGCGCGAGACAACGGCGGCATGA CGCTAGAGCTGCTCAACTGTT
GTCGCGCGCTGCCTTGTGCAAGTGAACCGGTTGACTTAGATCCCACTAGC
CTCCCCGTAAGTTGTGCCGGGGGGTGGTCATTTTCGCGTGGTAAATTACC
TCCGCAGGCGCCGTGGTTGGCGGCGACCTGGAGAGTTCATTTTACTCTTC
CCTAAACCGAAGTGGTTTCAATATTGTTTGTATACGGGCCCGGCGGGGCT
GAATTGATTTCTACCAGTATTCGAGGGAGGAGGCGCCACGATTGTCGCTA
CCCTACCCTTGTGTGGGCACCGAAGTAGGCAGGGAAGCAAGCAACGTTAA
CTTTTGGCGCGCGTTACGCGTGTAGGGGTTGAATTGGCGCTATGGCGCCG
GCCAACCTGGTCTAGTCTTCTACAACATACATACAGAAAAGGTTTTCTGG
CACGCATGCACATACACACATGGGGCCTGTTTTTTAGTGTTTGCCGAAAG
CAGCACGAGCACGGACTTGGCGTGCTGTATCCGAGATTGGCGTTTTTTAT
GTGTTTTTTATGTGTTTTTTGGCTCTGGTTTTTGGCGGTACGGTGGAGGG
TATTCCTTGAGAAGCACCACAGGTCATGCGCAATGCCAACTTGCACTCTT
GTCAGTTGCTCGCGGAGGTCCGGCGGGTCATCGTGCATGTTGCCATTTCG
CATCATCTGTAGGGCTACGAGGCACGCGGCCATGACCTATGGCAGGCCGT
AGGCAATGCATGCTTGTCTGGCCCCTCTGGTCTCTTCTATCTCGAGAGGT
ATCTATATACCAAAAACTGGAGGAGCTCATATGATACGATAGGTGGCGAT
AGAGGTGGTGGTGCAGCTTTGTTGTGTTATCTCCGGTGCTAAGACATGCA
TCGTGTGGGGTTTCTTTTTTTCTCCGGAGGAAATAGAAATAAGATCGTGG
AAAAAGGTTGAAACGGGTCAGAAGCTTCAAGTCAACAACGGGGGTGCCAT
ATGCCATGAAGTTCGGGTAAATTGTGCCCCAACATATATATCCGTGATAT
AATACTTTAGATTTTGGGTGTAGGGAGGGTTGTCGAGGCGGCGTGAGGTG
TTTGGTGGTGTTTGGTGGGGGTGGGAATAAT back to top Coding sequence (CDS) from alignment at C-linearis_contig103:221206..228436+
>mRNA_C-linearis_contig103.830.1 ID=mRNA_C-linearis_contig103.830.1|Name=mRNA_C-linearis_contig103.830.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=7590bp|location=Sequence derived from alignment at C-linearis_contig103:221206..228436+ (Chordaria linearis ClinC8C monoicous) back to top