mRNA_C-linearis_contig103.829.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: D7G450_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G450_ECTSI)

HSP 1 Score: 211 bits (538), Expect = 1.030e-58
Identity = 119/198 (60.10%), Postives = 138/198 (69.70%), Query Frame = 2

Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRAL-----PGP------QAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 1141
            CV  LP E+ PVL  LDKRLLPAFGALC+A+PELRRMY  VAGVAV+AMLE +TM+GLFQLAEEV VDVD CTSK++V+QALLASGK L+P  A  G+A+     P P      +A PA V DA TDR  L+ LFN T G S   S  WGT + LGEWYGVT++  GR   L L +NNL GPIP + G LT L  L L
Sbjct:  191 CVRALPPESVPVLSNLDKRLLPAFGALCSAEPELRRMYHTVAGVAVRAMLEQQTMKGLFQLAEEVDVDVDACTSKESVIQALLASGKCLLPSGATSGQAVIKSNPPVPTRVSPVKAMPAPVRDARTDRTVLMELFNTTKGPSWTTSTAWGTSSSLGEWYGVTVNAEGRVTKLDLEKNNLTGPIPPSLGGLTALLLLRL 388

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5JWQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ1_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.720e-48
Identity = 95/168 (56.55%), Postives = 117/168 (69.64%), Query Frame = 2

Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNL 1084
            CV  LP E+APVL  LD+R+LPAF ALC+A+PELR MYP VAG  V AMLE KT+R LF LA+ V VDV++CTS +A+VQ LL+SGK+L+PG                 V +ATTDR+AL+ LFN T G+S  N  GWGT APL +W+GVT+DG GR  +L LG N L
Sbjct:   54 CVLALPPESAPVLSNLDERILPAFCALCSAEPELRYMYPKVAGAVVGAMLEQKTIRDLFHLADTVGVDVESCTSHEAMVQVLLSSGKALLPGS----------------VPNATTDRSALMELFNATKGSSWTNKTGWGTSAPLQQWHGVTVDGAGRVTTLKLGWNKL 205

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K720_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K720_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.160e-47
Identity = 107/219 (48.86%), Postives = 124/219 (56.62%), Query Frame = 2

Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPAL-------------------------------VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTLY 1144
            CVC LP    PVLP LDKRLLPAFG LCA +PE+ RMYP V GVA +A+L  +TMR LF+LA+EV VDV  CTSKD V+Q LLASGK+L   PA   +A+   Q    L                                 DA+TDRAAL+ LF  T G S K    WGT APLGEWYGVT+D  GR   L LG+N L G +P     LT L  L L+
Sbjct:  292 CVCALPPVAEPVLPDLDKRLLPAFGTLCATEPEIYRMYPEVGGVAARALLAIQTMRDLFELADEVDVDVAKCTSKDEVIQILLASGKALFRAPATGVKAMLEGQTVSDLWLLARENDVDMDRCKPLVIKILLGSGKDLKPTRDASTDRAALLALFIATNGPSWKKGTAWGTSAPLGEWYGVTVDDDGRVSQLELGDNGLSGALPPELARLTALTVLDLH 510

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: D8LD84_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD84_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 8.170e-43
Identity = 105/218 (48.17%), Postives = 119/218 (54.59%), Query Frame = 2

Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPAL-------------------------------VHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 1141
            CVC LP    PVLP LDKRLLPAFG LCA +P + RMYP + GVA +A+L ++TMR LF+LA+EV VDV  CTSKD V+Q LL SGK+L   PA    A    Q    L                                 DA+TDRAAL+ LF  T G S   S  WGT APLGEWYGVT+D  GR   L L EN L G IP     LT L  L L
Sbjct:  404 CVCALPPVAEPVLPDLDKRLLPAFGTLCATEPGIYRMYPEIGGVAARALLASQTMRDLFELADEVDVDVARCTSKDEVIQILLGSGKALFRAPATGVEAKLESQTMLDLCQLAREKDVDIDRYKTHVIKILLGSGKDLNPTRDASTDRAALLALFIATNGPSWTTSTAWGTAAPLGEWYGVTVDDDGRVSQLELRENGLSGVIPPEFARLTALTKLNL 621

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KAT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAT8_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 4.530e-42
Identity = 97/197 (49.24%), Postives = 118/197 (59.90%), Query Frame = 2

Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRALPGPQAAPALVHDATTDRAALVGLFNDTGGASRKNSA---------------------------GWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDG 1090
            CV VLP E+A VL  LD+R+LPAF ALC+A+PELR MYP VAG  V AMLE KTMR LF LA+ V VDV++CTS +A+VQ LL+SGK+L+PGP                V +ATTDR+AL+ LFN T G+S  N                             GWGT  PL +W+GVT+DG GR  +L L  NNL G
Sbjct:  167 CVLVLPPESASVLSNLDERILPAFCALCSAEPELRCMYPKVAGAVVGAMLEQKTMRDLFHLADMVGVDVESCTSHEAMVQVLLSSGKALLPGP----------------VPNATTDRSALMELFNATNGSSWTNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXGWGTSTPLQQWHGVTVDGAGRVTTLDLSGNNLSG 347

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K3B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3B9_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 8.330e-36
Identity = 90/179 (50.28%), Postives = 105/179 (58.66%), Query Frame = 2

Query:  581 CVCVLPSENAPVLPKLDKRLLPAFGALCAADPELRRMYPVVAGVAVKAMLEAKTMRGLFQLAEEVRVDVDTCTSKDAVVQALLASGKSLVPGPAVQGRA---------LP-GPQAAPALVH--------DATTDRAALVGLFNDTGGASRK-------------NSAGWGTPAPLGEWY 1024
            CVCVLP EN PVLP+LD RLLPAFGALCA++PELRR+YP V G AVKAMLE KTM+ LF+LA EV  DV  CTSKD V++ L  S + LVP  A   +          LP G   APA+V           +TD  AL+ L+  T G   K             N  GWGT APLG+WY
Sbjct:  231 CVCVLPPENVPVLPELDSRLLPAFGALCASEPELRRLYPDVGGAAVKAMLEEKTMQSLFELATEVGADVTACTSKDGVIEILSTSERDLVPTQATACKGVVEEVVRTPLPSGKGPAPAVVAPIPAPPVGSTSTDMGALMALYFQTNGPPEKKGRLWAAAKGGWRNRRGWGTFAPLGDWY 409

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KIE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE6_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 2.150e-27
Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = 1

Query:   55 DFRAGLGGIGAAAAAEIAEVCSEVRGVERDLASVRPSVEECRAENMELFESFAGSLEAAQHGIEIMRSSPLKEAEEVFLKDFEASNGDVEFLKDARSKVMTALVQGH 375
            D R+GLG IG A  AE   + ++VR V+RDLASVR SVE+CRAENM  F SF   LEAA+ GIE+MR++PL+EA+ + LK+FEAS G+V FL+ A SK MTALVQGH
Sbjct:    5 DHRSGLGAIGTAVMAEATGIHADVREVKRDLASVRESVEDCRAENMVFFASFTAGLEAARQGIELMRNAPLEEAQ-MALKNFEASKGNVRFLETAHSKAMTALVQGH 110

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5KPC4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC4_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 3.200e-14
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = 1

Query:   34 GLANLGSDFRAGLGGIGAAAAAEIAEVCSEVRGVERDLASVRPSVEECRAENMELFESFAGSLEAAQHGIE 246
            GLA LG D R+GLG IG A  AE   + ++VR V+RDLASVR SVE+CRAENM  F SF   LEAA+ GIE
Sbjct:   21 GLATLGRDLRSGLGAIGTAVMAEATGIHADVREVKRDLASVRESVEDCRAENMVFFASFTAGLEAARQGIE 91

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A6H5K3D6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3D6_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 4.260e-14
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 2

Query:  920 TTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALGENNLDGPIPSAPGNLTPLEYLTL 1141
            +TDRAALV LFN TGGA+ K +  W T APLG+WYGV ++  GR + L+L  NNL G IP   G+L  L  L L
Sbjct:   10 STDRAALVALFNATGGANWKKNTKWNTDAPLGQWYGVEVNDAGRVVKLSLRYNNLKGHIPRQLGDLGALMTLNL 83

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BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Match: A0A7X4J6B9_9BACT (BIG2 domain-containing protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X4J6B9_9BACT)

HSP 1 Score: 74.3 bits (181), Expect = 4.230e-10
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 2

Query:  902 ALVHDATTDRAALVGLFNDTGGASRKNSAGWGTPAPLGEWYGVTMDGVGRFLSLALG----------ENNLDGPIPSAPGNLTPLEYLTLY 1144
            A    A+TDRAALV L+  TGG +  NS  W T APLGEW+GVT +  GR ++L +           +NN+ GPIP   GNL  LE +  Y
Sbjct:  132 AATDSASTDRAALVALYEATGGPNWLNSNNWLTDAPLGEWFGVTTNHEGRVVALEMTYYDWDTGQWIDNNISGPIPPELGNLANLERMQFY 222

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot

BLAST of mRNA_C-linearis_contig103.829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D7G450_ECTSI	1.030e-58	60.10	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]
A0A6H5JWQ1_9PHAE	1.720e-48	56.55	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K720_9PHAE	3.160e-47	48.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LD84_ECTSI	8.170e-43	48.17	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAT8_9PHAE	4.530e-42	49.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K3B9_9PHAE	8.330e-36	50.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KIE6_9PHAE	2.150e-27	61.68	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KPC4_9PHAE	3.200e-14	61.97	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K3D6_9PHAE	4.260e-14	54.05	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A7X4J6B9_9BACT	4.230e-10	45.05	BIG2 domain-containing protein n=1 Tax=Gemmatimona...	[more]

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