Homology
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Match:
D8LKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD5_ECTSI)
HSP 1 Score: 289 bits (739), Expect = 2.830e-89
Identity = 144/162 (88.89%), Postives = 149/162 (91.98%), Query Frame = 1
Query: 43 RARGSA--DEGKPVSRQLSRSYFVPRSLEGYERHLRQIHCEGYLQRQSRTSGTWRRRWFLLKDGYLSYFQDQEEAEVYRSKDGDSEFHHHPSSQRQLSLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAESKEGMNDWLFGFHRALASIIMRVIENKQGAG 522
R RG A DEG+PVSRQLSRSYFVPRSLEGYERHLRQIHCEGYLQRQSRTSG WRRRWFLLKDGYLSYFQDQEEAE YRSK+G S+FHHHPSS RQLSLDCVEAVRTEEKI PLVFRVISSHRDDLVLRAESKE MNDWLFGFHRALASII RV+ NK+G G
Sbjct: 48 RRRGGAVGDEGRPVSRQLSRSYFVPRSLEGYERHLRQIHCEGYLQRQSRTSGAWRRRWFLLKDGYLSYFQDQEEAEGYRSKEGGSQFHHHPSSLRQLSLDCVEAVRTEEKIRPLVFRVISSHRDDLVLRAESKEAMNDWLFGFHRALASIIARVVGNKRGGG 209
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Match:
A0A024GTT7_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTT7_9STRA)
HSP 1 Score: 81.6 bits (200), Expect = 7.860e-15
Identity = 50/140 (35.71%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 91 SRSYFVPRSLEGYERHLRQIHCEGYLQRQS-RTSGTWRRRWFLLKDGYLSYFQDQEEAEVYRSKDGDSEFHHHPSSQRQL-SLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAESKEGMNDWLFGFHRALASIIMRVIE 504
S SYF PR+L G +H EG L++QS + W++RWF+++ L Y++ + D+ H P R + LD V++V T + G F++ HR VLRAESK+ M DWLF F R++A+II +++
Sbjct: 586 SASYFQPRTLAG------PVHLEGCLEKQSVKNRSVWKQRWFVMQTSQLIYYKSARDV-----SSSDAITHPRPPGCRGIIELDQVDSVTTAKDFGVGAFQIRCQHRK-YVLRAESKDRMQDWLFNFQRSIANIISMLLQ 713
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Match:
A0A7S1GM84_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GM84_CYCTE)
HSP 1 Score: 51.6 bits (122), Expect = 1.900e-5
Identity = 28/89 (31.46%), Postives = 48/89 (53.93%), Query Frame = 1
Query: 316 QRQLSLDCVEAVR-TEEKIGPLVFRVISSHRDD-------------------LVLRAESKEGMNDWLFGFHRALASIIMRVIENKQGAG 522
++++SLDCV AVR TE + G F +++ DD L+LRA++ + +N+WLF FHR++AS + +++ G
Sbjct: 14 EKRVSLDCVGAVRSTELEYGQCSFELLALREDDELDVSTGNARSVSNDRTDSLILRAQNPDELNEWLFQFHRSIASFMRNIMDVMSNRG 102
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Match:
A0A4Y2M4L3_ARAVE (Uncharacterized protein CG43867 n=2 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2M4L3_ARAVE)
HSP 1 Score: 53.5 bits (127), Expect = 4.100e-5
Identity = 40/116 (34.48%), Postives = 54/116 (46.55%), Query Frame = 1
Query: 160 GYLQRQSRTSGTWRRRWFLLKDGYLSYFQDQEEAEVYRSKDGDSEFHHHPSSQRQLSLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAESKEGMNDWLFGFHRALASIIMRVIEN 507
GYL + TWRRRWF+LKDG LSY++ Q + + R G Q+ LD V V E G F V +S R L A+S M +W+ + L ++I R N
Sbjct: 647 GYLTKLGGKLKTWRRRWFVLKDGILSYYKSQND--IGRKPQG------------QILLDDVSRVNRAE--GASTFEVATSKRT-YYLTADSNSTMEEWI----KVLQNVIRRNTNN 741
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Match:
F0WZ08_9STRA (Protein phosphatase 1E putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WZ08_9STRA)
HSP 1 Score: 53.1 bits (126), Expect = 5.390e-5
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 1
Query: 325 LSLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAESKEGMNDWLFGFHRALASIIMRVIE 504
+ LD V++V T ++ G F++ HR VLRAESK+ M DWLF F R++A+II +++
Sbjct: 431 IELDQVDSVTTAKEFGVGAFQIRCHHRK-YVLRAESKDRMQDWLFNFQRSIANIISMLLQ 489
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Match:
A0A162P3D7_9CRUS (Pleckstrin domain-containing family H member 1 n=21 Tax=Daphnia TaxID=6668 RepID=A0A162P3D7_9CRUS)
HSP 1 Score: 52.8 bits (125), Expect = 7.650e-5
Identity = 37/122 (30.33%), Postives = 62/122 (50.82%), Query Frame = 1
Query: 130 ERHLRQIHCEGYLQRQSRTSGTWRRRWFLLKDGYLSYFQDQEEAEVYRSKDGDSEFHHHPSSQRQLSLDCVEAVRTEEKIGPLVFRVISSHRDDLVLRAESKEGMNDWLFGFHRALASIIMR 495
ERH ++ GYL + S TWR+RWF+LK+G LSY++ Q +++ R G Q+SLD ++ R G F + +S + L A+S +++W+ R L +++ R
Sbjct: 868 ERHSDELEKSGYLTKLSGKLKTWRKRWFVLKNGTLSYWKSQ--SDLGRKPQG------------QISLD--DSCRVWRADGAATFEISTSKKTHY-LTADSSSTVDEWV----RILQNVVRR 968
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.828.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 6
0 1 Expect = 2.83e-89 / Id = 88.89 Expect = 7.86e-15 / Id = 35.71 Expect = 1.90e-5 / Id = 31.46 Expect = 4.10e-5 / Id = 34.48 Expect = 5.39e-5 / Id = 43.33 Expect = 7.65e-5 / Id = 30.33 Sequence D8LKD5_ECTSI A0A024GTT7_9STRA A0A7S1GM84_CYCTE A0A4Y2M4L3_ARAVE F0WZ08_9STRA A0A162P3D7_9CRUS back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.828.1
>prot_C-linearis_contig103.828.1 ID=prot_C-linearis_contig103.828.1|Name=mRNA_C-linearis_contig103.828.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=174bp
GGGRTTAINIGGRSRARGSADEGKPVSRQLSRSYFVPRSLEGYERHLRQI back to top mRNA from alignment at C-linearis_contig103:189331..191082-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig103.828.1 ID=mRNA_C-linearis_contig103.828.1|Name=mRNA_C-linearis_contig103.828.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1752bp|location=Sequence derived from alignment at C-linearis_contig103:189331..191082- (Chordaria linearis ClinC8C monoicous)GGCGGGGGTAGGACCACGGCGATTAACATCGGCGGACGAAGCCGGGCTCG
CGGTTCGGCAG GTGAGCTGTTTTGGCTCATTGTTGCTCTTGGTACATAAG
AAACCAAGAGGAGTGGGGGGGCTCCGCAACTGGAGAGGGTTTGGGGACGT
TTGTGTGGGGGCGATTGTTAGACAGCGGCAGGCGCCCGCGAGGTTTGCGG
TGTTGTTCGAGTACTGCAACACTTGCCGTGTGTTACATGGTCGTCCGGGT
AAGACAGAACGCCACCCTCAAAACGAAAATAAGCAGTTCCCGCACTCTGC
CAACCAGCGAAGTTCAGAAGTCACGACCAAGCCCAGGTCCCGCCAGAGCT
CAGTTACATTCCCTACGGATGCGAGGTCCATGATCGAACAACTTCGGCTT
GTGGATGCATGATGGACGAGTACCCCTCAACCCCCCCCCCCCCGCCGCCC
CTATTTTGTACCATGGCATGCTTTTGCAGATGAAGGCAAGCCCGTGTCGC
GGCAGCTGTCGCGGAGCTACTTCGTTCCGCGCAGCTTGGAAGGGTACGAG
CGCCACCTCCGGCAGATCCACTGCGAGGGCTACCTGCAGCGGCAGAGCCG
GACATCCGGCACGTGGCGGAGGCGCTGGTTTCTCCTCAAG GTTCGACAGA
GTAGTTCGGTCTGCTTTGATGTTTCTTCTCCTCAGGGTGGGCGACAAAAT
TGGCCGGAGAGACGACAACGGTTTTAGCCTAGTGTAGCTGTTGTTTTTCC
TCGAGGGAGGACTACTGCTGTGTTGCCTTGCTGTTTGTCACCGAGGTTCG
TCTGTTGTGTGTCGGGTTGGCTCATCAGAAAATACTGTACCAGTATATTT
TGTTCTGCTGCTGCTGCTGCTGCTGCGGCTGCTGCGATTGTGTAGGACGG
GTACCTGTCGTACTTCCAAGACCAAGAGGAGGCGGAGGTCTATCGATCCA
AGGACGGCGACTCGGAGTTTCACCATCACCCCAGCTCTCAGAGGCAGCTA
TCCCTGGACTGCGTCGAGGCCGTCCGGACAGAG GTGAGTGAGGGGCGCCC
GCCCGTGCTTGTGTGTGTTTCTGCAGAGGAAGAGAATACCGTTTTTGAAA
AACGGCATCGGTGCTTTCAAACGACCAGACTCATCCCCGTTAACTTTTTT
GTTTTATGTTGCGCCGACCATGGTGCCCGGCTGGCCAATGAGCGTACTTA
GCTATTTGGTGGCTTTCCGACGAGAGGAAGCGTCGGAGGCAAGGTGAAGC
TTGGGCGCAGAGGGGAAGCAGAATCCACCGCGAGAGTTGTGTTCTTCCGC
GCGTGGACGGTGAACGTTGCCACATGCTACAGGTCGTGCTTCCCAAACGA
CAAGATGAATGCTGAATACCTTCGAAAGCGTTCGATCGCACAGGGCAGGG
GGTGCACTGAGCGATCTTCTCACCGTGACTGATCTCAAAAACATCGATCG
CACAGCAGCAGTGGCGAGGAGGGAGCGCACCACTGCAACCTCCCCTGTAC
CTCTTATAAAAAAAGCATGCTGCCTACATAAAACGCGTGCAATAGTCCAC
CTACCACCTCAACCCCGCTTCATTTTTCTCGCTCGCAGGAGAAGATCGGC
CCGCTGGTGTTCCGGGTGATCTCGAGCCACCGAGACGACCTGGTGCTTCG
CGCCGAGTCTAAGGAGGGGATGAACGACTGGCTGTTCGGGTTTCACAGGG
CCCTGGCCAGCATCATCATGCGGGTCATCGAGAACAAGCAGGGGGCGGGG
back to top Coding sequence (CDS) from alignment at C-linearis_contig103:189331..191082-
>mRNA_C-linearis_contig103.828.1 ID=mRNA_C-linearis_contig103.828.1|Name=mRNA_C-linearis_contig103.828.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1044bp|location=Sequence derived from alignment at C-linearis_contig103:189331..191082- (Chordaria linearis ClinC8C monoicous) back to top