mRNA_C-linearis_contig103.821.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: D8LKC9_ECTSI (PIPK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKC9_ECTSI) HSP 1 Score: 988 bits (2555), Expect = 0.000e+0 Identity = 656/986 (66.53%), Postives = 707/986 (71.70%), Query Frame = 1 Query: 364 QSEDEPIPLSPPPAAVRAVSDNFGTVGRGXXXXXXXXX--STERRGWKEGAFLPGGLGAPLPRRSLSIGGLRSNGGSGKGESASGMKGGRGRQGQGWMSDGEEAEEGFSPIGHEIAYIKQRRRSANKGEKANGGLGSLGAWPNKAKKDADTAKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDKASARKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGATGALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDK---------------------------MRYMLSVAG-------------------------------------------------NYNFLEFISNAKSGEFFFFS----------HDER--------------FMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRSAAKPHSKAVEEQQQSPRRYSRFFNFADEAENDTTPGFKPAPAAVPEAAPPRAGDDNGDAAAPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGDGPDLSPEARAWLLEAVPPSASAMSARTIASDQAELMYDHASAARDSLD--KETRSAALDSVTGAAAAGELYPFSAEEEGAELEIYSDEEAAGGGLWSGAGTGTEGEGDATDTGGDYTEGDVEYETPGEH-LGDTQDPDKSMSRCSTAKGNLSSLPDAFLSSREASAAVAXXXXXASSGKTTKGSV----------SVAGGRVWMGRSRRPGSRPRPEPRLAPPESGVSCAIKKRLDGGLDSEVGGKRGRDIYFMGIIDVLQEYNARKHGETFLKSLAHDRAEISCVDPATYCQRFIDFLERHTD 2976
Q ED+ PLSPPPAAVRAVSD G GXXXXXXXX S ERR WKE F L RRS S+G LRSN S K KG QGQGWMSDGEEAE G SPIGHEIAY+KQRR SA+KG+K GGLGSLGAWPNK+KKD D+AKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDK + RKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGATG LVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDK + M + AG +Y+ + AK+ + H+E + +SSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLN+KVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLA+RQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDR+A KP + EE+ QSPRRYS+FFNFADEA+N+ TPGFKPAP A+P P G D A A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G+ P + L V S SA+SA T S+QAELM+ +A+ R+S D ++T ALDSV GAAAAGELYP S EE+ +++IYSDEEAAGGGLWS GTGTEGE DATDTGGDYTEGD EYETPGEH L DT +S+SRCSTAKG LS+LPD+FLSS XXXXX SV+ RVW G++R+P SRPRPEPRLAPPES VSCAIK+RLDGGLDSEVGGKRGRDIYFMGIID+LQEYNARKHGETFLKSLAHDRAEISCVDPATYCQRF DFLERHTD
Sbjct: 153 QREDQA-PLSPPPAAVRAVSDMIDRAGAGXXXXXXXXSGSSVERRRWKEAGFPGSSL---RRRRSASVGELRSNRSSRKFTVMGITKG----QGQGWMSDGEEAE-GLSPIGHEIAYMKQRRGSASKGDKPTGGLGSLGAWPNKSKKDVDSAKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDKGTTRKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGATGYLVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKPDDIPTVMTSHIAVWKHYKDTKVVRLDVGAMFAAAGRGFRPGWGGGGRRQNYICNGVKGGCRADVRARKQQSEEFKVAFVVAEYNDYDCSDGKVGAKAAALTGLASACQHGEQPEHEEHGPEKRPQAHLEPGVLLWSPFQSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNKKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLAERQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRTA-KPSDE--EEKHQSPRRYSKFFNFADEADNNATPGFKPAPVALPAGPIPGTGPDPPPRTAGAHGSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLRLSPGVG-------LPRVEASQSAVSAGTFDSNQAELMFGNATGGRNSADTKRKTSMVALDSVAGAAAAGELYPASTEEDPIDIDIYSDEEAAGGGLWSATGTGTEGE-DATDTGGDYTEGDAEYETPGEHNLEDTGGLKRSLSRCSTAKGTLSNLPDSFLSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSTRRVWTGKARKPISRPRPEPRLAPPESAVSCAIKRRLDGGLDSEVGGKRGRDIYFMGIIDILQEYNARKHGETFLKSLAHDRAEISCVDPATYCQRFNDFLERHTD 1118
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A6H5KUU1_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU1_9PHAE) HSP 1 Score: 909 bits (2349), Expect = 2.580e-297 Identity = 557/777 (71.69%), Postives = 596/777 (76.71%), Query Frame = 1 Query: 478 STERRGWKEGAFLPGGLGAPLPRRSLSIGGLRSNGGSGKGESASGMKGGRGRQGQGWMSDGEEAEEGFSPIGHEIAYIKQRRRSANKGEKANGGLGSLGAWPNKAKKDADTAKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDKASARKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQ---VDKYTFPPSGATGALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLADRQGKLHLGSQREAFLK---VARADAEFLARMKIMDYSLLTGIHDRSAAKPHSKAVEEQQQSPRRYSRFFNFADEAENDTTPGFKPAPAAVPEAA--------PPRA----GDDNGDAAAPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVGDGPDLSPEARAWLLEAVPPSASAMSARTIASDQAELMYDHASAARDSLDKETRSA--ALDSVTGAAAAGELYPFSAEEEGAELEIYSDEEAAGGGLWSGAGTGTEGEGDATDTGGDYTEGDVEYETPGEH-LGDTQDPDKSMSRCSTAKGNLSSLPDAFLSS-REASAAVAXXXXXASSGKTTK-------------GSVSVAGGRVWMGRSRRPGSR 2703
S ERR WKE F L RRS S+G LRSN GS K KG QGQGWMSDGEEAE G SPIGHEIAY+KQRR SANKG+K GGLGSLGAWPNK+KKD D+AKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDK + RKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQ VDKYTFPPSGATG LVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLN+KVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLA+RQGKLHLGSQREAFLK VAR DAEFLARMKIMDYSLLTGIHDR+A P EE+ QSPRRYS+FFNFADEA+N TPGFKPAP A+P PPRA G +GD + AG XXXXXXXXXXXX G G G LSP L V S SA+SART S+QAELM+ + + + S D + + + ALDSV GAAAAGELYP S EE+ +++IYSDEEAAGGGLWS GTGTEGE DATDTGGDYTEGD EYETPGEH L DT + +S+SRCSTAKG LS+LPD+FL S +EA+ A A XXXX G SV+ RVW G++R+P SR
Sbjct: 564 SAERRRWKEAGFPGSSL---RRRRSASVGELRSNRGSRKFTVKGPTKG----QGQGWMSDGEEAE-GLSPIGHEIAYMKQRRGSANKGDKPTGGLGSLGAWPNKSKKDVDSAKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDKGTTRKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQARCVDKYTFPPSGATGYLVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNKKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLAERQGKLHLGSQREAFLKAREVARGDAEFLARMKIMDYSLLTGIHDRTAKPPDE---EEKHQSPRRYSKFFNFADEADNKATPGFKPAPVALPGGPVPGTGPNLPPRAAGAHGSSDGDDRSAAGDGREAPPRARRGGDEXXXXXXXXXXXX----------------GGGQGLRLSPGVG---LPRVEGSQSAVSARTFDSNQAELMFGNTTGGKSSPDTKRKMSMVALDSVAGAAAAGELYPASTEEDPIDIDIYSDEEAAGGGLWSAIGTGTEGE-DATDTGGDYTEGDAEYETPGEHDLEDTGELKRSLSRCSTAKGTLSNLPDSFLFSLQEATGAAADXXXXXXXXXXXXXXXXXXXXXXXXGGGESVSTRRVWTGKARKPVSR 1309
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: D8LLT5_ECTSI (PIPK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLT5_ECTSI) HSP 1 Score: 382 bits (981), Expect = 3.690e-112 Identity = 217/399 (54.39%), Postives = 278/399 (69.67%), Query Frame = 1 Query: 784 NKAKKDADTAKVIYLGDIDF-DAPGEATATDILVRQHRTRVRVKRVKDKASARKKRRTKPKRRIRSGKPLHPEE--DEVEYILTIGMMLGLRVAVGRQANPLAKP--ELTVEDFYQVDKYTFPPSGATGALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVL-DTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRSAAKPHSKAVEEQQQSPRRYSRFFNFADEAENDTTPGFKPAPAAVPEAAPPRAGDDNGDAAAPAG 1962
+K KK+ + + +YL DIDF A G ATA D+LV+Q R RVR+ R+K+ + G+ P+E DE LTI MMLG+RVAVGRQ+NPL +P E++ E F QVDKYTFPP+GATG + TPSHKL +TFKF+DYAPK FKK+R+HFG+++ YMLSVAGNY++LE I+N+KSG FFF+SHD++++IK MK +E KF R+ILP YY H HP +FL+RF GMY VK H +K+ FIVM V DT K IH+ YDLKGSSLGR AK GEKVLKDNDL + GK+HLGSQ+ AF++ A+ADAEFL + +MDYS+LT IHD S+ P +AV PR YS F+ FADEA++ TTP F+ P+ +GDA+APAG
Sbjct: 141 SKTKKEVGSPEPVYLQDIDFATAGGVATAADVLVKQARNRVRINRLKEGQA--------------KGRHTEPDEKGDEKRLKLTIRMMLGVRVAVGRQSNPLDQPGAEISEEAFSQVDKYTFPPAGATGRMATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFFRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEAAKADAEFLCSVNVMDYSMLTCIHD-SSRPPDEEAVRRDSIEPR-YSTFYTFADEAKDRTTPEFERIPS-------------SGDASAPAG 508
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A836CAN4_9STRA (PIPK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAN4_9STRA) HSP 1 Score: 331 bits (849), Expect = 5.160e-91 Identity = 218/476 (45.80%), Postives = 262/476 (55.04%), Query Frame = 1 Query: 739 GEKANGGLGSLGAWPNKAKKDADTAKVIYL----------GDIDFDA--PGEA-TATDILVRQHRTRVRVKRVKDKASA-----------RKKRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFY-----------------------------------------------QVDKYTFPPSGATGALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDK----------------------MRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRS-------AAKPHSKAVEEQQQSPRRYSRFFNFADEAEND 1866
GE G + AW A K A+ ++IY GDI A PG A +A+D++V+ HR RVRVK R+K R P RR++ G+P+ + D + +LT+GMMLGLRVAVGRQ NP+ + ELTV DFY QVDKY FPPSGA G +VTP HKLG TFKFKDYAPKV K++ EHFG D+ MRYMLSVAGNY FLEFI+NA+SG+FFF+SHDE FMIKTMK +ET+FLRRILPHYYEH++ HP+TFLVRF GMYRVKMHH+NRKVHF+VM+SV DT+K+ V KD DL KLHLG QREAFLKV D FLA+MKIMDYSLL GIHDR+ + +PH Y +F FAD+ D
Sbjct: 206 GEGEEGDAQPMVAWRQPASK-AEEPELIYEKDMHVSAAPPGDIHMPAAQPGLAPSASDVVVQAHRKRVRVKXXXXXXXXXXXXPAKPDRDRRKSRVVP-RRLQFGRPIKNDPDSM--LLTLGMMLGLRVAVGRQENPMERQELTVTDFYXXXXXXXXXXXXXXXYQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVDKYVFPPSGAMGVMVTPPHKLGHTFKFKDYAPKVSKRVHEHFGRDRVLSAXXXXXXXXXXXXXXXXXXMRYMLSVAGNYQFLEFITNARSGQFFFYSHDESFMIKTMKKAETRFLRRILPHYYEHIRRHPDTFLVRFCGMYRVKMHHINRKVHFMVMSSVYDTHKD---------------------VGKDLDLVRSGNKLHLGRQREAFLKVIENDVAFLAKMKIMDYSLLLGIHDRTRPPDANTSCRPH-------------YDKFITFADDVGAD 643
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A6H5JMY7_9PHAE (PIPK domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMY7_9PHAE) HSP 1 Score: 311 bits (797), Expect = 2.310e-89 Identity = 192/442 (43.44%), Postives = 261/442 (59.05%), Query Frame = 1 Query: 691 GHEIAYIKQRRRSANKGEKANGGLGSLGAWPNKAKKDADTAKVIYLGDIDFDAPGEATATDILVRQHRTRVRVKRVKDKASARKKRRTKPKRRIRSGKPLHPEE--DEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGATGALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYK-EIHNTYDLKGSSLGRDAKPGEKVLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRSAAKPHSKAVEEQQQSPRRYSRF---------------FNFADEAENDTTPGFKPAPAAVPEAAPPRAGDDNGDAAAPAG 1962
G E+A + + S G ++ + KK K +++ DI P + + I V + R+RVRV R+K G+ + +E D+ + LT MMLG+RVAVGRQA+P + LT +D+ Q DKY FPP+GA G L TPSHKL RTFKF+DYAPKVFK +R FG+D+ YM SVAG+Y++LE I+N+KSG FFF+SHD++++IK MK +E KF R ILP YYEH + HP++ L+RF GMY VK H RK+ FIVM + T + +IH YDLKGS + R AK GEKVLKDN+L + + K LGSQR+AFLKV R+DAEFL + +MDYS+ +H+ A++P + ++ R Y+ F F FADEA + KP P+ EA A D +GD A+ G
Sbjct: 7 GRELARLGKEDPSPTDGR-------AIAVLREQTKKKLGEEKPVFMNDIRL-GPKDESFEHIQVHEARSRVRVGRLK------------------YGRNVKADEKADDEKLNLTFRMMLGVRVAVGRQASPFSSEGLTADDYTQQDKYVFPPAGAGGRLPTPSHKLNRTFKFRDYAPKVFKNLRGLFGIDEALYMNSVAGDYDYLELITNSKSGSFFFYSHDQKYIIKNMKRAEAKFFRSILPQYYEHHRTHPDSVLIRFCGMYLVKKGH--RKIPFIVMKCIDGTAQMKIHKKYDLKGSKVHRTAKEGEKVLKDNNLREAKTKFRLGSQRDAFLKVVRSDAEFLRDVNVMDYSMFVSVHE--ASRPPERTIQ------RGYTEFTXXXXXXXXXXXXXXFTFADEASDGPKSAVKPIPSRRGEAFRAAAADTDGDGASTVG 412
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A6H5KVE7_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVE7_9PHAE) HSP 1 Score: 289 bits (739), Expect = 2.940e-83 Identity = 155/269 (57.62%), Postives = 197/269 (73.23%), Query Frame = 1 Query: 1159 LVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVL-DTYKEIHNTYDLKGSSLGRDAKPGEKVLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRSAAKPHSKAVEEQQQSPRRYSRFFNFADEAENDTTPGFKPAPAAVPEAAPPRAGDDNGDAAAPAG 1962
+ TPSHKL +TFKF+DYAPK FKK+R+HFG+++ YMLSVAGNY++LE I+N+KSG FFF+SHD++++IK MK +E KFLR+ILP YY H HP +FL+RF GMY VK H +K+ FIVM V DT K IH+ YDLKGSSLGR AK GEKVLKDNDL + GK+HLGSQ+ AF++ A+ADAEFL + +MDYS+LT IHD S+ P +AV PR YS F+ FADEA++ TTP F+ P+ +GDA+APAG
Sbjct: 1 MATPSHKLNKTFKFRDYAPKAFKKLRQHFGIEESAYMLSVAGNYDYLELITNSKSGSFFFYSHDQKYIIKAMKRAEAKFLRKILPKYYAHHLAHPGSFLIRFCGMYLVKNGH--KKIPFIVMKCVEGDTNKTIHSKYDLKGSSLGRSAKEGEKVLKDNDLDVKYGKIHLGSQKAAFVEAAKADAEFLCSVNVMDYSMLTCIHD-SSRPPDEEAVRRDSTEPR-YSTFYTFADEAKDRTTPEFERIPS-------------SGDASAPAG 252
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A4D9DCS9_9STRA (PIPK domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCS9_9STRA) HSP 1 Score: 294 bits (752), Expect = 6.550e-81 Identity = 157/280 (56.07%), Postives = 197/280 (70.36%), Query Frame = 1 Query: 949 RTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGATGALV-TPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEK-----VLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRS 1770
R + KRR G + E ++ Y LTIGMMLG+RVAVGR P +LT+ DF QVDKY FPP G TP H L FKFKDYAPK+F +IR+ FGVD YMLSV+GNYN+LEF+SN+KSG+FFF+SHD RFMIKT S E KFLR+ILPHYY++V ++P T L RFYGM+RVKM HL RKVHF++M+SV DT ++I+ YDLKGS++GR + P + V KD DL D K LG++R F++ DA FLA + IMDYSLL GI+D++
Sbjct: 188 RRRKKRRNFQGNVIKGEHEQ--YTLTIGMMLGIRVAVGR---PQQMDDLTLMDFMQVDKYLFPPKGCNKPPHRTPPHHLSHDFKFKDYAPKIFHRIRQLFGVDSASYMLSVSGNYNYLEFMSNSKSGQFFFYSHDGRFMIKTQTSEENKFLRKILPHYYQYVSLNPNTLLTRFYGMHRVKMRHLKRKVHFVIMHSVFDTKEKIYRIYDLKGSTVGRSSGPDKARKEGVVYKDLDLVDDHTKFQLGTKRRLFMEQLERDASFLASLNIMDYSLLIGIYDKT 462
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A7S2RMD3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMD3_9STRA) HSP 1 Score: 278 bits (710), Expect = 3.860e-79 Identity = 165/333 (49.55%), Postives = 218/333 (65.47%), Query Frame = 1 Query: 820 IYLGDIDFDAPGEATATDILVRQ---HRTRV------RVKRVKDKASARKKRRTKPKRRIR-SGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGAT-GALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEK----VLKDNDLADRQGKLHLGSQR-EAFLKVARADAEFLARMKIMDYSLLTGIHDRS 1770
I L DI FD P A + L+ H T++ +KR K + +KK+R K R+ GK + + ++ YI+TIGMM+G+RV+VGR+ N + P L V +F + DKY FPP G+ +TP H L TFKFKDYAPKVFK IRE + VD YMLSV G++NF++FI+N++SG+FFF+SHD +MIKT E KFLRRILP YY+++ +P + + RFYGM+RVKM+HL RKVHF+VM SV DT ++IH YDLKGS+ GR A ++ VLKD DL LG +R + F ADA+FL+ MKIMDYSLL GIHDR+
Sbjct: 47 INLDDITFDPPAGTPAYEALIANRDLHVTKIDKHVKRHLKRPKRLTNRKKKKR---KDRVNLKGKVIDGQHEQ--YIMTIGMMIGIRVSVGRENN-ITTP-LLVREFNRADKYIFPPRGSNRNGRITPPHSLQHTFKFKDYAPKVFKSIREMYNVDAASYMLSVCGDFNFIQFIANSRSGQFFFYSHDGSYMIKTQTKEENKFLRRILPSYYKYLSQNPNSLITRFYGMHRVKMYHLRRKVHFVVMQSVFDTAEKIHTMYDLKGSTHGRQASIKDRETGGVLKDLDLVSDAKMFKLGPKRADLFRAQMEADAKFLSEMKIMDYSLLVGIHDRT 372
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A7R9YC01_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YC01_9STRA) HSP 1 Score: 282 bits (722), Expect = 4.910e-77 Identity = 153/303 (50.50%), Postives = 201/303 (66.34%), Query Frame = 1 Query: 904 RVKRVKDKASARK-KRRTKPKRRIRSGKPLHPEEDEVEYILTIGMMLGLRVAVGRQANPLAKPELTVEDFYQVDKYTFPPSGAT-GALVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGEK----VLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHDRSAAKPHSKA 1794
R+KR K K R K++++ +R GK + + ++ Y L +GMM LR +GR+ P + L DF VDKY FPP+G G L TP H L TFKFKDY+P VF+ IRE ++ YMLSV GN NF+EFI N+KSG+FFF+SHD ++MIKT S E KFLRRILPHYY H++ +P++ + RFYGM+RVKM+HL RKVHF+VM SV +T + IH YDLKGS +GR+A E+ VLKDNDL K+ LG ++ FL + R D FL M+IMDYSLL GIHD++ P ++
Sbjct: 57 RIKRPKTKNLTRNVKKKSRKRRSYIKGKVIDGQHEQ--YTLALGMMHALRTVIGRRTAPTQRAHLISSDFTSVDKYVFPPNGVLRGPLPTPPHNLAHTFKFKDYSPLVFRAIRELSNIEDDSYMLSVCGNRNFIEFIPNSKSGQFFFYSHDGKYMIKTQTSEENKFLRRILPHYYAHLRSNPDSLMTRFYGMHRVKMYHLRRKVHFVVMGSVFNTTERIHTIYDLKGSRVGREATAEERKNGGVLKDNDLVADGKKIVLGPKKARFLDILRRDVTFLQEMQIMDYSLLLGIHDKTKRVPEEQS 357
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Match: A0A7S1XT07_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XT07_9STRA) HSP 1 Score: 263 bits (673), Expect = 5.250e-73 Identity = 143/297 (48.15%), Postives = 192/297 (64.65%), Query Frame = 1 Query: 1000 EDEVEYILTIGMMLGLRVAVGRQA-----NPLAKPELTVE-------DFYQVDKYTFPPSGATGA-LVTPSHKLGRTFKFKDYAPKVFKKIREHFGVDKMRYMLSVAGNYNFLEFISNAKSGEFFFFSHDERFMIKTMKSSETKFLRRILPHYYEHVKVHPETFLVRFYGMYRVKMHHLNRKVHFIVMNSVLDTYKEIHNTYDLKGSSLGRDAKPGE----KVLKDNDLADRQGKLHLGSQREAFLKVARADAEFLARMKIMDYSLLTGIHD------RSAAKPHSKAVEEQQQSPR 1821
E+ +Y LT GMMLG+RV+VGR A E T E DF +DK FPP G T +TP HKL FKFKDY+PK+F+ IR+HFG+D+ YMLS+AG++NF+EFI+N+ SG+FFF+SHD R+MIKTM+ +E K LR +LP YY H+K +T + RFYGM+RVKM H+++ +HF++M SV T IH +YDLKGS++GR E KV KD DL + +L LG RE F++ D++FLAR IMDYSLL G+H+ R + K H+ V +Q+ R
Sbjct: 91 EEHHQYALTYGMMLGIRVSVGRLAMEDHRRQTIASERTSESDDVVDADFEHIDKLLFPPEGNTRPPFITPPHKLHTAFKFKDYSPKIFRAIRKHFGIDESDYMLSLAGDFNFIEFIANSHSGQFFFYSHDGRYMIKTMEKAECKLLRDLLPDYYNHIKNQRQTLMTRFYGMHRVKMRHISKVMHFVIMGSVFHTGLPIHVSYDLKGSTVGRMVSEEERAKGKVRKDQDLLKDERRLQLGPMRETFIEQVERDSQFLARHNIMDYSLLVGVHNLREGGGRESGKRHASVVLTEQEQQR 387 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig103.821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.821.1 >prot_C-linearis_contig103.821.1 ID=prot_C-linearis_contig103.821.1|Name=mRNA_C-linearis_contig103.821.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=789bp MKGGRGRQGQGWMSDGEEAEEGFSPIGHEIAYIKQRRRSANKGEKANGGLback to top mRNA from alignment at C-linearis_contig103:96592..114614+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig103.821.1 ID=mRNA_C-linearis_contig103.821.1|Name=mRNA_C-linearis_contig103.821.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=18023bp|location=Sequence derived from alignment at C-linearis_contig103:96592..114614+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig103:96592..114614+ >mRNA_C-linearis_contig103.821.1 ID=mRNA_C-linearis_contig103.821.1|Name=mRNA_C-linearis_contig103.821.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4734bp|location=Sequence derived from alignment at C-linearis_contig103:96592..114614+ (Chordaria linearis ClinC8C monoicous)back to top |