Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 308 |
| Cds size | 306 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927373.0099323-CDS-C-linearis_contig103:95531..95593 | 1622927373.0099323-CDS-C-linearis_contig103:95531..95593 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 95532..95593 + |
| 1690879661.2036633-CDS-C-linearis_contig103:95531..95593 | 1690879661.2036633-CDS-C-linearis_contig103:95531..95593 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 95532..95593 + |
| 1622927373.019845-CDS-C-linearis_contig103:96149..96393 | 1622927373.019845-CDS-C-linearis_contig103:96149..96393 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 96150..96393 + |
| 1690879661.2189357-CDS-C-linearis_contig103:96149..96393 | 1690879661.2189357-CDS-C-linearis_contig103:96149..96393 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 96150..96393 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.820.1 >prot_C-linearis_contig103.820.1 ID=prot_C-linearis_contig103.820.1|Name=mRNA_C-linearis_contig103.820.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=102bp
LADWIKGGGLNDSDVDTIASGMSPRSARSGRSPLAADGASNCARTYGRPE
ITAAAMAPALGAAAGTSSDRRQGPLPGPEPVAGGGGVAHGVETESNGRLV
DG back to topmRNA from alignment at C-linearis_contig103:95532..96395+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig103.820.1 ID=mRNA_C-linearis_contig103.820.1|Name=mRNA_C-linearis_contig103.820.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=864bp|location=Sequence derived from alignment at C-linearis_contig103:95532..96395+ (Chordaria linearis ClinC8C monoicous)
CTTGCGGATTGGATCAAGGGGGGCGGGTTGAACGACAGCGACGTGGACAC
CATCGCCAGCGGGTGAGATTTCTAGTTTTTTGCCATGTATGATGGACGTC
AGCCGTCTCAGCACGTCTAACCTGGGCAAAAAACAGCAGTGTTCTCAGGG
GGGTGTTGCATAGACACACCAACCTTTTCCTTGCTGCCCCCATGAAAATG
TTACTCTTGTACAAGCGTCAGCGGATATAGATTCTTCTAACCTGTGACCA
AGTCGGTTCAGGGAGACTGCTGTTGTAGGCACGCTAGCCCTTCCCTCGCC
GTCCCAGACTGCACGCACAAGATCTGCGATCCGTGTAATTCGTTGGTTGT
TGCATTCGTGTGATTGTTTGTGTTGTAGGGGTGATGGTTTACTTCACATT
GTCGGCTTGTTCTGAAAACGGCTGCCACGCTGCGTGAAACGCGAACGCGG
CAGACCCTTCTGGGTGATGGCACTTTCACGGCCGTCTTTCTCGGGTTTGC
ATCATCCCCGTTATTAAACAACAACTTTCTGCTGAACCCCCCCCCCCTGT
ATCGACTCCTACCCTTCCTCGTCCCCCCCGTGGTATTCGACGCTGCCACC
CACGCCTGCCGACCGTAGGATGTCGCCGAGGTCTGCGAGGTCCGGGAGGT
CCCCGCTAGCAGCCGACGGGGCCTCGAACTGCGCCAGGACGTATGGCCGC
CCCGAGATCACCGCGGCGGCTATGGCGCCGGCGTTGGGCGCGGCAGCGGG
AACGTCCTCGGACAGACGGCAAGGCCCTCTACCGGGGCCGGAGCCAGTGG
CTGGTGGTGGTGGGGTGGCGCATGGCGTGGAGACTGAGAGCAACGGCAGA
CTGGTAGATGGGGG back to topCoding sequence (CDS) from alignment at C-linearis_contig103:95532..96395+ >mRNA_C-linearis_contig103.820.1 ID=mRNA_C-linearis_contig103.820.1|Name=mRNA_C-linearis_contig103.820.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at C-linearis_contig103:95532..96395+ (Chordaria linearis ClinC8C monoicous)
CTTGCGGATTGGATCAAGGGGGGCGGGTTGAACGACAGCGACGTGGACAC
CATCGCCAGCGGCTTGCGGATTGGATCAAGGGGGGCGGGTTGAACGACAG
CGACGTGGACACCATCGCCAGCGGGATGTCGCCGAGGTCTGCGAGGTCCG
GGAGGTCCCCGCTAGCAGCCGACGGGGCCTCGAACTGCGCCAGGACGTAT
GGCCGCCCCGAGATCACCGCGGCGGCTATGGCGCCGGCGTTGGGCGCGGC
AGCGGGAACGTCCTCGGACAGACGGCAAGGCCCTCTACCGGGGCCGGAGC
CAGTGGCTGGTGGTGGTGGGGTGGCGCATGGCGTGGAGACTGAGAGCAAC
GGCAGACTGGTAGATGGGGATGTCGCCGAGGTCTGCGAGGTCCGGGAGGT
CCCCGCTAGCAGCCGACGGGGCCTCGAACTGCGCCAGGACGTATGGCCGC
CCCGAGATCACCGCGGCGGCTATGGCGCCGGCGTTGGGCGCGGCAGCGGG
AACGTCCTCGGACAGACGGCAAGGCCCTCTACCGGGGCCGGAGCCAGTGG
CTGGTGGTGGTGGGGTGGCGCATGGCGTGGAGACTGAGAGCAACGGCAGA
CTGGTAGATGGG back to top
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