Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1233 |
| Cds size | 819 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927374.4415908-UTR-C-linearis_contig103:93619..93745 | 1622927374.4415908-UTR-C-linearis_contig103:93619..93745 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig103 93620..93745 + |
| 1690879662.1775546-UTR-C-linearis_contig103:93619..93745 | 1690879662.1775546-UTR-C-linearis_contig103:93619..93745 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig103 93620..93745 + |
| 1622927374.4545076-UTR-C-linearis_contig103:94333..94619 | 1622927374.4545076-UTR-C-linearis_contig103:94333..94619 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig103 94334..94619 + |
| 1690879662.1862242-UTR-C-linearis_contig103:94333..94619 | 1690879662.1862242-UTR-C-linearis_contig103:94333..94619 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig103 94334..94619 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927374.471626-CDS-C-linearis_contig103:94619..95438 | 1622927374.471626-CDS-C-linearis_contig103:94619..95438 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 94620..95438 + |
| 1690879662.1941352-CDS-C-linearis_contig103:94619..95438 | 1690879662.1941352-CDS-C-linearis_contig103:94619..95438 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 94620..95438 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.819.1 >prot_C-linearis_contig103.819.1 ID=prot_C-linearis_contig103.819.1|Name=mRNA_C-linearis_contig103.819.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=273bp
MSSASPATTSAAAAAAAAAAAAAVSNGALSPAGVAVSASTQQQPVSNGHG
ATATATTTSNYTDGSSRAGAEAPAKDQQQAAQKRAVLPRTAASPSTEDFD
SGAAAGSNGDSGGTRQHTGTTATTVAAPGGTTAVAITSHPPRHQNPIEPQ
QQQQQQQQQSNGGTHSSSLSPPPPPAIPAAAATGLPALAEWMKDGGVDDS
DADTANSLLGGAPSSRGSAISAAAAAAGATAGDDSDSPTVAGGAKSAGDV
PGTQQSGGTAVGEGKPAPAAMGG back to topmRNA from alignment at C-linearis_contig103:93620..95438+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig103.819.1 ID=mRNA_C-linearis_contig103.819.1|Name=mRNA_C-linearis_contig103.819.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1819bp|location=Sequence derived from alignment at C-linearis_contig103:93620..95438+ (Chordaria linearis ClinC8C monoicous)
AGCGAGATCACCCCGCGTCTCTGCGTGACCCGCGTGCGAAAGCTCCGGAC
TAAATCCTCGCACACGGGAGAAGGGTTTTGCTCTATGCAACGCGCTTGAA
GGATTGGAGACAGGCGGGGCAGAGAGGTGAGTTGTGGCGGTTGTGGGGTC
GATTTTAAAACCCTGCCGTTCAGGTCGACCTCGGTTGTGATGAAACAGCA
CACCTCCTAATTTACCCCACCGTGCTCAGCACTGCTGTTGCACAAGAAGC
TCTCGACTCCTCTGCGTGGCAGTACAGCCAAATGGATCCACTAAGCGGAA
CTCCGTCCATGACCTCACGCCTAGGCGTAGTGGTTACTCTTCGGTCTCTG
GCAGATCCTAGTGTTCCGGTTCGAAAGTCCCAGAGTCCGGCTCCTGAAAC
TGAATCGAAGTACCAAAGAACACCCCAAGCTTTTCTGGCTCTTGCCACGA
GAGGGGGAGAGAGCTGGATAGATGCTGACATCAGAGCACCGTAATTTCGC
GGCCATGTGATCAACTTTGGGGGGGGGGAGGCAGGAGAGGCCACATATTT
CACAAGCTTGAAGTAGACATTCAGGTAGCCTTTGGCTTGGGGCCTCTTTT
CGGGCGCACGTCAGCGGTTTGGCCAGCTCTCTCTCTCTCTCTCTCTCCTG
CCATTGGCCGTTGGCCTACTTACCCGCTCTCGGCCGCTCTACTCCTGTAC
TTCGTGTATTGTAGTGCACAGGACACACCACGAGAACGTGACGTGCCTGT
TGAAACAAGGCCTAGAAGCTTAGGAGCTAGGCGGCAGCAGGAGAATACAG
CCCAAGGAAGGATAGCACGCCGCAAATCAGCGACAGCTGCTGCGACAAAA
AAAACAACCACACCATCAACGACACTTATTATCTCATCAGCGCCTACTTG
TATTGCATCGCCACACAATTAGTGTCTCGGGGTCGGAGAGTTGGGAACCC
ACGTAATCGCTCGCGCGGCGATACGCCACAAGACCGGATCTCTCTGAAGC
ATGTCGTCCGCATCGCCAGCCACCACATCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCTGTTAGCAACGGAGCACTATCGCCTGCGGGTG
TAGCTGTTTCTGCTTCGACTCAGCAGCAGCCGGTATCAAACGGCCATGGA
GCCACCGCCACCGCCACCACCACCAGCAACTACACTGATGGCTCTTCGAG
GGCGGGCGCAGAAGCTCCAGCAAAGGACCAGCAACAAGCCGCCCAAAAAC
GGGCAGTCTTGCCACGCACGGCAGCATCGCCGTCGACAGAGGATTTCGAC
AGCGGCGCTGCCGCCGGGAGCAACGGCGACAGTGGTGGTACTAGGCAGCA
CACCGGCACCACCGCAACAACAGTAGCAGCACCAGGAGGGACCACAGCAG
TGGCGATAACAAGCCATCCCCCGCGTCACCAGAATCCCATCGAACCACAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGAGCAACGGGGGGACACACTCGTC
GTCCCTGTCCCCCCCCCCCCCGCCGGCGATACCGGCGGCCGCCGCGACCG
GGCTGCCCGCGCTCGCCGAGTGGATGAAGGACGGAGGCGTGGACGACAGC
GACGCTGACACCGCGAACAGCCTCTTGGGCGGCGCGCCCAGCAGCAGGGG
TTCCGCAATATCAGCGGCGGCAGCGGCGGCGGGGGCTACTGCTGGCGACG
ACTCCGACTCCCCCACGGTGGCGGGCGGCGCGAAATCCGCGGGGGACGTT
CCGGGAACCCAGCAATCAGGAGGAACGGCGGTGGGGGAGGGGAAGCCAGC
TCCGGCGGCGATGGGTGGA back to topCoding sequence (CDS) from alignment at C-linearis_contig103:93620..95438+ >mRNA_C-linearis_contig103.819.1 ID=mRNA_C-linearis_contig103.819.1|Name=mRNA_C-linearis_contig103.819.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at C-linearis_contig103:93620..95438+ (Chordaria linearis ClinC8C monoicous)
ATGTCGTCCGCATCGCCAGCCACCACATCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCTGTTAGCAACGGAGCACTATCGCCTGCGGGTG
TAGCTGTTTCTGCTTCGACTCAGCAGCAGCCGGTATCAAACGGCCATGGA
GCCACCGCCACCGCCACCACCACCAGCAACTACACTGATGGCTCTTCGAG
GGCGGGCGCAGAAGCTCCAGCAAAGGACCAGCAACAAGCCGCCCAAAAAC
GGGCAGTCTTGCCACGCACGGCAGCATCGCCGTCGACAGAGGATTTCGAC
AGCGGCGCTGCCGCCGGGAGCAACGGCGACAGTGGTGGTACTAGGCAGCA
CACCGGCACCACCGCAACAACAGTAGCAGCACCAGGAGGGACCACAGCAG
TGGCGATAACAAGCCATCCCCCGCGTCACCAGAATCCCATCGAACCACAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGAGCAACGGGGGGACACACTCGTC
GTCCCTGTCCCCCCCCCCCCCGCCGGCGATACCGGCGGCCGCCGCGACCG
GGCTGCCCGCGCTCGCCGAGTGGATGAAGGACGGAGGCGTGGACGACAGC
GACGCTGACACCGCGAACAGCCTCTTGGGCGGCGCGCCCAGCAGCAGGGG
TTCCGCAATATCAGCGGCGGCAGCGGCGGCGGGGGCTACTGCTGGCGACG
ACTCCGACTCCCCCACGGTGGCGGGCGGCGCGAAATCCGCGGGGGACGTT
CCGGGAACCCAGCAATCAGGAGGAACGGCGGTGGGGGAGGGGAAGCCAGC
TCCGGCGGCGATGGGTGGAATGTCGTCCGCATCGCCAGCCACCACATCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCTGTTAGCAACGGA
GCACTATCGCCTGCGGGTGTAGCTGTTTCTGCTTCGACTCAGCAGCAGCC
GGTATCAAACGGCCATGGAGCCACCGCCACCGCCACCACCACCAGCAACT
ACACTGATGGCTCTTCGAGGGCGGGCGCAGAAGCTCCAGCAAAGGACCAG
CAACAAGCCGCCCAAAAACGGGCAGTCTTGCCACGCACGGCAGCATCGCC
GTCGACAGAGGATTTCGACAGCGGCGCTGCCGCCGGGAGCAACGGCGACA
GTGGTGGTACTAGGCAGCACACCGGCACCACCGCAACAACAGTAGCAGCA
CCAGGAGGGACCACAGCAGTGGCGATAACAAGCCATCCCCCGCGTCACCA
GAATCCCATCGAACCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAGCA
ACGGGGGGACACACTCGTCGTCCCTGTCCCCCCCCCCCCCGCCGGCGATA
CCGGCGGCCGCCGCGACCGGGCTGCCCGCGCTCGCCGAGTGGATGAAGGA
CGGAGGCGTGGACGACAGCGACGCTGACACCGCGAACAGCCTCTTGGGCG
GCGCGCCCAGCAGCAGGGGTTCCGCAATATCAGCGGCGGCAGCGGCGGCG
GGGGCTACTGCTGGCGACGACTCCGACTCCCCCACGGTGGCGGGCGGCGC
GAAATCCGCGGGGGACGTTCCGGGAACCCAGCAATCAGGAGGAACGGCGG
TGGGGGAGGGGAAGCCAGCTCCGGCGGCGATGGGTGGA back to top
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