Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 310 |
| Cds size | 306 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927374.409227-CDS-C-linearis_contig103:27170..27476 | 1622927374.409227-CDS-C-linearis_contig103:27170..27476 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 27171..27476 + |
| 1690879662.168522-CDS-C-linearis_contig103:27170..27476 | 1690879662.168522-CDS-C-linearis_contig103:27170..27476 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig103 27171..27476 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig103.813.1 >prot_C-linearis_contig103.813.1 ID=prot_C-linearis_contig103.813.1|Name=mRNA_C-linearis_contig103.813.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=102bp
SLPSTNCPKKEAISQKTRASLLLTLTFRNTLSACTTDHHNRHSSRQRSTT
ATPKHVTAKSTIIIPGKRGRRRTNVNVTAQSTNSSLGKRGTTHTKAYYNT
YL back to topmRNA from alignment at C-linearis_contig103:27171..27478+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig103.813.1 ID=mRNA_C-linearis_contig103.813.1|Name=mRNA_C-linearis_contig103.813.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=308bp|location=Sequence derived from alignment at C-linearis_contig103:27171..27478+ (Chordaria linearis ClinC8C monoicous)
AGTTTGCCTTCAACAAATTGCCCAAAAAAAGAAGCGATTTCACAGAAAAC
CCGTGCTAGCCTACTGTTGACGTTGACGTTTAGGAATACACTATCGGCAT
GCACCACGGACCACCACAATCGACACAGCAGCCGACAAAGGTCGACGACA
GCAACCCCAAAACACGTCACCGCCAAGTCTACCATTATCATTCCGGGCAA
GCGTGGACGAAGGCGTACCAACGTCAACGTCACCGCCCAGTCTACCAACA
GTAGTCTGGGCAAGCGTGGCACAACACATACGAAGGCGTACTATAATACG
TACCTGAG back to topCoding sequence (CDS) from alignment at C-linearis_contig103:27171..27478+ >mRNA_C-linearis_contig103.813.1 ID=mRNA_C-linearis_contig103.813.1|Name=mRNA_C-linearis_contig103.813.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at C-linearis_contig103:27171..27478+ (Chordaria linearis ClinC8C monoicous)
AGTTTGCCTTCAACAAATTGCCCAAAAAAAGAAGCGATTTCACAGAAAAC
CCGTGCTAGCCTACTGTTGACGTTGACGTTTAGGAATACACTATCGGCAT
GCACCACGGACCACCACAATCGACACAGCAGCCGACAAAGGTCGACGACA
GCAACCCCAAAACACGTCACCGCCAAGTCTACCATTATCATTCCGGGCAA
GCGTGGACGAAGGCGTACCAACGTCAACGTCACCGCCCAGTCTACCAACA
GTAGTCTGGGCAAGCGTGGCACAACACATACGAAGGCGTACTATAATACG
TACCTGAGTTTGCCTTCAACAAATTGCCCAAAAAAAGAAGCGATTTCACA
GAAAACCCGTGCTAGCCTACTGTTGACGTTGACGTTTAGGAATACACTAT
CGGCATGCACCACGGACCACCACAATCGACACAGCAGCCGACAAAGGTCG
ACGACAGCAACCCCAAAACACGTCACCGCCAAGTCTACCATTATCATTCC
GGGCAAGCGTGGACGAAGGCGTACCAACGTCAACGTCACCGCCCAGTCTA
CCAACAGTAGTCTGGGCAAGCGTGGCACAACACATACGAAGGCGTACTAT
AATACGTACCTG back to top
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