Homology
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)
HSP 1 Score: 231 bits (590), Expect = 2.340e-69
Identity = 114/120 (95.00%), Postives = 117/120 (97.50%), Query Frame = 1
Query: 1 NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWET 360
NGVVDAEGIALCAAVEGRREE +KLLLRRQGCNANTSTRAYANMAHDSTLPM+SNQLFQDTPLVSAFELGGFYSPRI RLLLDAGADV SRVRYEGIEGDCV+HDTPLAIAESILPLWET
Sbjct: 204 NGVVDAEGIALCAAVEGRREEFVKLLLRRQGCNANTSTRAYANMAHDSTLPMYSNQLFQDTPLVSAFELGGFYSPRITRLLLDAGADVASRVRYEGIEGDCVMHDTPLAIAESILPLWET 323
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)
HSP 1 Score: 215 bits (547), Expect = 1.540e-66
Identity = 105/120 (87.50%), Postives = 109/120 (90.83%), Query Frame = 1
Query: 1 NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWET 360
NGVVDAEGIALCAAVEGRREECI+LLLR QGCNAN RAYANM HD+TLPM+SNQLF DTPLVSAFELGGFYSPRI RLLL AGADV SRVRYEGIEGDCV+HDTPL IAES LPLWET
Sbjct: 200 NGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRYEGIEGDCVMHDTPLTIAESTLPLWET 319
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)
HSP 1 Score: 224 bits (571), Expect = 1.780e-66
Identity = 113/124 (91.13%), Postives = 115/124 (92.74%), Query Frame = 1
Query: 1 NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWETEWDA 372
NG VDAEGIALCAAVEGRREECIKLLL ANTSTRAYANMAHDSTLPM+SNQLFQDTPLVSAFELGGFYSPRI RLLLDAGADV SRVRYEGIEGDCV+HDTPLAIAESILPLWETEWDA
Sbjct: 206 NGAVDAEGIALCAAVEGRREECIKLLL------ANTSTRAYANMAHDSTLPMYSNQLFQDTPLVSAFELGGFYSPRITRLLLDAGADVASRVRYEGIEGDCVMHDTPLAIAESILPLWETEWDA 323
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)
HSP 1 Score: 122 bits (305), Expect = 2.640e-30
Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = 1
Query: 4 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRY-----EGIEGDCVIHDTPLAIAES 339
GVVD EG+ALCAA+EG E C+ LLLRRQG N N STRAY NMAH + + + +FQ+TPLVS F LG F++PR ARLLL+AGAD S VR+ EG E + I TPL +A S
Sbjct: 216 GVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFI-GTPLELATS 331
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)
HSP 1 Score: 96.3 bits (238), Expect = 8.280e-21
Identity = 66/164 (40.24%), Postives = 79/164 (48.17%), Query Frame = 1
Query: 4 GVVDAEGIALCAAV-----------------------------------------------EGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRY-----EGIEGDCVIHDTPLAIAES 339
GVVD EG+ALCAA+ EG E C+ LLLRRQG NANT TRAY NM H + + +FQ+TPLVS F LG F++P ARLLL+AGAD S VR+ EG E + I TPL +A S
Sbjct: 223 GVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFI-GTPLDLATS 385
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)
HSP 1 Score: 80.9 bits (198), Expect = 2.150e-15
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 4 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESIL 345
GV+D +G ALC A+EGR E C+KLL+ R+G + + R Y N+ + ++ PL+ AF G ++PRI R LLD GAD +++VR+ GIEG + D PL A+ L
Sbjct: 248 GVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRF-GIEGLGEMIDEPLVAAKITL 349
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)
HSP 1 Score: 79.3 bits (194), Expect = 7.460e-15
Identity = 52/122 (42.62%), Postives = 69/122 (56.56%), Query Frame = 1
Query: 4 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIAESILPLWETEWD 369
GV D +G ALC A+EGR E C+KLL+ R+G NA+ + Y N DS D LV AF G Y+PR+ R LLD GAD + +VR+E I+G I PL A+ IL +T ++
Sbjct: 235 GVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNT--DSAC---------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFE-IKGLGEIAGGPLVAAKIILRHEQTHFE 344
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Match:
D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)
HSP 1 Score: 53.1 bits (126), Expect = 1.250e-5
Identity = 44/110 (40.00%), Postives = 48/110 (43.64%), Query Frame = 1
Query: 4 GVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTLPMHSNQLFQDTPLVSAFELGGFYSPRIARLLLDAGADVESRVRYEGIEGDCVIHDTPLAIA 333
GVVD G AL A E REE +K LL+ Q Y N D F TPLV E G SPRIAR L+D GAD +S V DTPL A
Sbjct: 237 GVVDT-GRALVVAAEYSREESVKFLLQHQAGGGTW----YVNNTLDP---------FGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFA 332
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.811.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 8
0 1 Expect = 2.34e-69 / Id = 95.00 Expect = 1.54e-66 / Id = 87.50 Expect = 1.78e-66 / Id = 91.13 Expect = 2.64e-30 / Id = 57.26 Expect = 8.28e-21 / Id = 40.24 Expect = 2.15e-15 / Id = 41.23 Expect = 7.46e-15 / Id = 42.62 Expect = 1.25e-5 / Id = 40.00 Sequence A0A6H5K1W5_9PHAE A0A6H5JNS0_9PHAE A0A6H5JL58_9PHAE A0A6H5JHQ8_9PHAE A0A6H5L5L0_9PHAE A0A6H5KSL5_9PHAE D8LP44_ECTSI D7G1U9_ECTSI back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Viruses Seed ortholog score 85.9 Seed ortholog evalue 1.5e-14 Seed eggNOG ortholog 654926.Q8QNQ8_ESV1K Hectar predicted targeting category other localisation GOs GO:0008150,GO:0010941,GO:0016032,GO:0019048,GO:0019050,GO:0019054,GO:0033668,GO:0035821,GO:0039526,GO:0042981,GO:0043067,GO:0043069,GO:0044003,GO:0044068,GO:0044403,GO:0044419,GO:0044531,GO:0044532,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051701,GO:0051704,GO:0051817,GO:0052040,GO:0052041,GO:0052150,GO:0052248,GO:0052433,GO:0052490,GO:0060548,GO:0065007 EggNOG free text desc. aspartic-type endopeptidase activity EggNOG OGs 4QB1T@10239,4QUVA@35237 COG Functional cat. S Best tax level dsDNA viruses, no RNA stage Best eggNOG OG NA|NA|NA Exons 1 Model size 375 Cds size 372 Stop 0 Start 0
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927372.899275-CDS-C-linearis_contig102:599663..600035 1622927372.899275-CDS-C-linearis_contig102:599663..600035 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 599664..600035 + 1690879661.1495702-CDS-C-linearis_contig102:599663..600035 1690879661.1495702-CDS-C-linearis_contig102:599663..600035 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 599664..600035 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.811.1
>prot_C-linearis_contig102.811.1 ID=prot_C-linearis_contig102.811.1|Name=mRNA_C-linearis_contig102.811.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=124bp
NGVVDAEGIALCAAVEGRREECIKLLLRRQGCNANTSTRAYANMAHDSTL back to top mRNA from alignment at C-linearis_contig102:599664..600037+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.811.1 ID=mRNA_C-linearis_contig102.811.1|Name=mRNA_C-linearis_contig102.811.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=374bp|location=Sequence derived from alignment at C-linearis_contig102:599664..600037+ (Chordaria linearis ClinC8C monoicous)AACGGTGTGGTTGACGCGGAGGGTATTGCACTGTGTGCTGCCGTGGAAGG
TCGGCGTGAGGAGTGTATCAAGCTCCTTCTACGGAGACAAGGATGCAATG
CGAATACCAGTACGCGTGCATACGCCAACATGGCCCACGACAGTACCTTG
CCCATGCACTCAAACCAACTTTTCCAAGACACCCCTCTTGTGAGCGCATT
TGAGCTGGGGGGTTTCTATTCTCCCAGAATCGCGCGCTTGCTCCTTGACG
CCGGCGCGGACGTGGAATCGCGCGTTCGGTATGAAGGAATCGAAGGAGAT
TGTGTGATACACGATACGCCCTTGGCGATCGCCGAATCGATTCTACCTTT
GTGGGAGACCGAATGGGATGCT back to top Coding sequence (CDS) from alignment at C-linearis_contig102:599664..600037+
>mRNA_C-linearis_contig102.811.1 ID=mRNA_C-linearis_contig102.811.1|Name=mRNA_C-linearis_contig102.811.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at C-linearis_contig102:599664..600037+ (Chordaria linearis ClinC8C monoicous) back to top