Homology
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
D7FYM7_ECTSI (Proteasome subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM7_ECTSI)
HSP 1 Score: 487 bits (1254), Expect = 3.080e-164
Identity = 240/252 (95.24%), Postives = 247/252 (98.02%), Query Frame = 3
Query: 96 MSQGPAPHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
MSQ P+PHSA PIWHSEGTK+++VLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTR+DEKP RSA +TVELVKEL VTAGERDIYTGDAVEIT+ISKDGTSTQMFPLKKD
Sbjct: 1 MSQRPSPHSA-PIWHSEGTKDLQVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRKDEKPARSAAETVELVKELLVTAGERDIYTGDAVEITIISKDGTSTQMFPLKKD 251
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A835ZC48_9STRA (Proteasome subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC48_9STRA)
HSP 1 Score: 383 bits (984), Expect = 8.360e-124
Identity = 185/243 (76.13%), Postives = 210/243 (86.42%), Query Frame = 3
Query: 123 AAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
A +W +EG +V S IDHGVTQNPFERRWSPYDFNGGTTLA+AG DYVV+ ADTRMSTGY IMSRDQTKLHQLTSKCVIASAGC++DVTTLWK LD M MY HN+ K+M+TPA AQMLANTLYYRRFFPYYSFNVL GLD +GKG+VFSYDAIGS+ERV YSASGSGQ+YIIP++DNLV FKTR D KP R+A +TV+LVK++F+TAGERDIYTGDAVEI +I+ GT TQ+F LKKD
Sbjct: 15 ALAMWSTEGQSDVRP--SDIDHGVTQNPFERRWSPYDFNGGTTLAVAGEDYVVIGADTRMSTGYQIMSRDQTKLHQLTSKCVIASAGCRSDVTTLWKMLDHRMVMYKHNIGKDMSTPAAAQMLANTLYYRRFFPYYSFNVLAGLDAEGKGAVFSYDAIGSYERVEYSASGSGQSYIIPVMDNLVGFKTRLDPKPVRTAEETVDLVKDVFITAGERDIYTGDAVEICIITATGTQTQIFNLKKD 255
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A7S2DDA1_9STRA (Proteasome subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDA1_9STRA)
HSP 1 Score: 352 bits (902), Expect = 4.990e-111
Identity = 168/243 (69.14%), Postives = 201/243 (82.72%), Query Frame = 3
Query: 129 PIWHSEGTKNVEV--LSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
PIWHSEG +V + + IDHGVTQNP+ERR+SPYDFNGGTTLA+AG D+VVVA DTRMS+GY I+SR +KLH LTSKC++A+AGCKTDV TL L++ M MYDH+ KEM+T A AQML+NTLYYRRFFPYYSFNVL GLDE+G+G+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D P ++ + V +VK+ FVTAGERDIYTGD +EI+VI KDG T FPLKKD
Sbjct: 54 PIWHSEGQASVPLGPTADTIDHGVTQNPYERRFSPYDFNGGTTLAVAGKDFVVVAGDTRMSSGYEILSRKVSKLHPLTSKCILAAAGCKTDVDTLTNMLNIKMQMYDHDCGKEMSTTAAAQMLSNTLYYRRFFPYYSFNVLAGLDEEGRGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRTDVMPDFTSEEAVNIVKDAFVTAGERDIYTGDTLEISVIKKDGIETITFPLKKD 296
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A7S2SKB7_9STRA (Proteasome subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKB7_9STRA)
HSP 1 Score: 340 bits (872), Expect = 3.360e-107
Identity = 163/247 (65.99%), Postives = 196/247 (79.35%), Query Frame = 3
Query: 111 APHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
AP +W SEG + S DHGVTQNP+ERR+SPYDFNGGTTLAIAG D+VVVAADTR+S+GY I+SR+ +KLH LT +CV+A+AGCKTDV TL L M MY+H+M K M TPAVAQML+NTLYYRRFFPYYSFNVL G+D GKG+VFSYDAIGS+ERVPYS+SGSGQ Y++PL+DNLV FK RQD P + + V +VK+ F+TAGERDIYTGDAVEI VI+ G ++++ PLKKD
Sbjct: 10 APPPTPIMWSSEGAVALPAEPSAFDHGVTQNPYERRFSPYDFNGGTTLAIAGKDFVVVAADTRLSSGYEILSRNVSKLHPLTGRCVLAAAGCKTDVDTLRNTLHARMQMYEHDMGKAMDTPAVAQMLSNTLYYRRFFPYYSFNVLAGIDSDGKGAVFSYDAIGSYERVPYSSSGSGQNYMVPLMDNLVCFKNRQDTPPELTMEEVVRIVKDAFITAGERDIYTGDAVEIKVITASGVASEIMPLKKD 256
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A7S2FLM8_9STRA (Proteasome subunit beta n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLM8_9STRA)
HSP 1 Score: 338 bits (866), Expect = 3.410e-106
Identity = 167/242 (69.01%), Postives = 195/242 (80.58%), Query Frame = 3
Query: 129 PIWHSEGTKNVEV-LSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
PIW SEG E IDHGVT+NP+ERR+SPYDFNGGTTLA++G D+VVVA DTRMS+GY I SR+ KLHQLTSK V+A+AGCKTDV TL L M MY+H+ KEM+T AVAQML+NTLY RRFFPYYSFNVL GLDE+GKG+VFSYDAIGS+ER P+SASGSGQ+Y+IPL+DNLV FKTR D P + + V +VK+ FVTAGERDIYTGDAVEI VIS G +T++FPLKKD
Sbjct: 23 PIWSSEGPSAGEFGKRDHIDHGVTENPYERRFSPYDFNGGTTLAVSGKDFVVVAGDTRMSSGYEIKSRNVPKLHQLTSKTVLAAAGCKTDVDTLTNLLRTRMQMYEHDCNKEMSTTAVAQMLSNTLYGRRFFPYYSFNVLAGLDEEGKGAVFSYDAIGSYERTPFSASGSGQSYLIPLMDNLVTFKTRLDPVPDMTVEEIVSIVKDAFVTAGERDIYTGDAVEIKVISATGVTTELFPLKKD 264
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A7S2XWL8_9STRA (Proteasome subunit beta n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWL8_9STRA)
HSP 1 Score: 332 bits (851), Expect = 4.050e-104
Identity = 159/254 (62.60%), Postives = 198/254 (77.95%), Query Frame = 3
Query: 108 PAPHSAAPIWHSEGTKN------VEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
P + PIWHSE + + + V S H V+ P + RW PY+FNGGTTLAIAG+++VVVAADTRMS GY+I+SR+++KLH+LT KC++A+AGC+TDVTTL LD+ M MY HN+ EM T AVAQMLANTLYYRRFFPYYSFNVLCG+D++GKG V+SYDAIGSFE VPYSASGSGQ+YIIPL+D+ V FK R KP + +TV++VK FVTAGERDIYTGD VEI V++ +G +++FPLKKD
Sbjct: 2 PTVQNGVPIWHSESSNSTVKPYQLPVNGSSQKHEVSGGPVQHRWGPYEFNGGTTLAIAGSNFVVVAADTRMSQGYNILSRNESKLHKLTEKCILAAAGCQTDVTTLRNVLDIRMQMYQHNVGHEMPTTAVAQMLANTLYYRRFFPYYSFNVLCGIDKEGKGVVYSYDAIGSFESVPYSASGSGQSYIIPLMDSTVAFKNRTQPKPNYTIEETVDIVKSAFVTAGERDIYTGDEVEIKVLTAEGCRSEIFPLKKD 255
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
K0S6G4_THAOC (Proteasome subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S6G4_THAOC)
HSP 1 Score: 325 bits (834), Expect = 3.360e-101
Identity = 163/266 (61.28%), Postives = 202/266 (75.94%), Query Frame = 3
Query: 54 EGRPIFSALQEGSTMSQGPAPHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
EG S +GS +S +PH A P G+ ++ SGIDHGVTQ P+ERR+SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT +CV+ SAGCKTDV L LD+ M +Y HN K MATP+VAQML NTLYY+RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++ K R DE+ A + VE+VK+ F+TAGERDIYTGDAV+I VI+KDG Q F LK D
Sbjct: 26 EGGASISVHFDGSNLSVAQSPH-ADP-----GSSAID--GSGIDHGVTQAPYERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTGRCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKPMATPSVAQMLGNTLYYKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVISHKNRLDERRDLPAEEVVEIVKDAFLTAGERDIYTGDAVDIMVITKDGIDKQTFQLKAD 283
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A7S3PW57_9STRA (Proteasome subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PW57_9STRA)
HSP 1 Score: 316 bits (810), Expect = 7.990e-98
Identity = 154/255 (60.39%), Postives = 191/255 (74.90%), Query Frame = 3
Query: 123 AAPIWHSEGTKNVEVLSSG------------IDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
A P+ SEG + V + IDHGVTQ P+ER +SPYDFNGGTTLAI+G DY +VAADTR+STGY I+SR+ TKLH+LTSKCV+ SAGCKTD+ L LD++ +Y HN KEM+TP+VAQML NTLYY+RFFPYYSFNVL G+D++GKG+V+SYDAIGSFER P +A+GSGQ+++IPLLDN+++ R DEK A + VE+VK+ FVTAGERDIYTGD +EI VI G + FPLK D
Sbjct: 19 ALPVHSSEGGATIPVSFTQNNPNADGEDYNHIDHGVTQAPYERSFSPYDFNGGTTLAISGPDYAIVAADTRLSTGYQILSRNVTKLHELTSKCVLGSAGCKTDIDQLRSVLDINQKVYHHNHRKEMSTPSVAQMLGNTLYYKRFFPYYSFNVLAGVDKEGKGAVYSYDAIGSFERTPVTATGSGQSFLIPLLDNVIKHNNRNDEKRDLPAEEVVEIVKDAFVTAGERDIYTGDMLEIKVIRASGITNISFPLKAD 273
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
A0A7S2N0R8_9STRA (Proteasome subunit beta n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2N0R8_9STRA)
HSP 1 Score: 316 bits (809), Expect = 1.050e-97
Identity = 156/253 (61.66%), Postives = 192/253 (75.89%), Query Frame = 3
Query: 123 AAPIWHSEGTKNVEVLSS----------GIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
A PI SEG + V S IDHGVT+ +ER +SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SRD TKLH LT KCV+ SAGCKTDV L LD+ M +Y HN K M+TP+VAQML+NTLYY+RFFPYY+FNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ+++IPL+DN++ K R DEK + + VE+VK+ FVTAGERDIYTGDAVEI VI+K+G ++F LK D
Sbjct: 19 ALPIHSSEGDVTIPVSFSHGNNPNPHADDIDHGVTRATYERGFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRDVTKLHALTEKCVLGSAGCKTDVDQLRSVLDIKMKIYAHNHRKPMSTPSVAQMLSNTLYYKRFFPYYAFNVLAGVDAEGKGAVYSYDAIGSFERTPFSASGSGQSFLIPLMDNVIAHKNRCDEKRDLPSEEVVEIVKDAFVTAGERDIYTGDAVEIMVITKEGIKKEIFKLKAD 271
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Match:
B8BSP9_THAPS (Proteasome subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSP9_THAPS)
HSP 1 Score: 314 bits (805), Expect = 5.480e-97
Identity = 147/231 (63.64%), Postives = 185/231 (80.09%), Query Frame = 3
Query: 159 VEVLSSGIDHGVTQNPFERRWSPYDFNGGTTLAIAGADYVVVAADTRMSTGYSIMSRDQTKLHQLTSKCVIASAGCKTDVTTLWKELDVSMTMYDHNMEKEMATPAVAQMLANTLYYRRFFPYYSFNVLCGLDEQGKGSVFSYDAIGSFERVPYSASGSGQTYIIPLLDNLVEFKTRQDEKPTRSAPDTVELVKELFVTAGERDIYTGDAVEITVISKDGTSTQMFPLKKD 851
+++ S IDHG+TQ+P+ERR+SPY+FNGGTTLAI+G DY VVAADTR+S+GY I+SR+ +KLH LT KCV+ SAGCKTDV L LD+ M +Y HN K MATP+VAQML NTLY +RFFPYYSFNVL G+D +GKG+V+SYDAIGSFER P+SASGSGQ ++IPL+DN++ K R D+K + + VE+VK+ F+TAGERDIYTGDAVEI VI+ G ++ F LK D
Sbjct: 50 LDIDGSNIDHGITQSPWERRFSPYEFNGGTTLAISGPDYAVVAADTRLSSGYEILSRNVSKLHPLTEKCVLGSAGCKTDVDQLRSVLDIKMKVYAHNHRKAMATPSVAQMLGNTLYMKRFFPYYSFNVLAGIDSEGKGAVYSYDAIGSFERTPFSASGSGQAFLIPLMDNVISHKNRLDQKRELGSEEVVEIVKDAFLTAGERDIYTGDAVEIMVITAKGIESETFKLKAD 280
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.809.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.08e-164 / Id = 95.24 Expect = 8.36e-124 / Id = 76.13 Expect = 4.99e-111 / Id = 69.14 Expect = 3.36e-107 / Id = 65.99 Expect = 3.41e-106 / Id = 69.01 Expect = 4.05e-104 / Id = 62.60 Expect = 3.36e-101 / Id = 61.28 Expect = 7.99e-98 / Id = 60.39 Expect = 1.05e-97 / Id = 61.66 Expect = 5.48e-97 / Id = 63.64 Sequence D7FYM7_ECTSI A0A835ZC48_9STRA A0A7S2DDA1_9STRA A0A7S2SKB7_9STRA A0A7S2FLM8_9STRA A0A7S2XWL8_9STRA K0S6G4_THAOC A0A7S3PW57_9STRA A0A7S2N0R8_9STRA B8BSP9_THAPS Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 487.6 Seed ortholog evalue 3.4e-135 Seed eggNOG ortholog 2880.D7FYM7 Preferred name PSMB1 KEGG ko ko:K02732 KEGG Pathway ko03050,map03050 KEGG Module M00337,M00340 Hectar predicted targeting category other localisation GOs GO:0000502,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005839,GO:0005886,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006887,GO:0006950,GO:0006952,GO:0006955,GO:0007088,GO:0007346,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009896,GO:0009987,GO:0010498,GO:0010499,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0016020,GO:0016192,GO:0016579,GO:0019538,GO:0019748,GO:0019774,GO:0019941,GO:0030071,GO:0030141,GO:0030163,GO:0031331,GO:0031410,GO:0031597,GO:0031974,GO:0031981,GO:0031982,GO:0031983,GO:0031984,GO:0032270,GO:0032436,GO:0032940,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034515,GO:0034774,GO:0036211,GO:0036230,GO:0042119,GO:0042175,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043412,GO:0043632,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044433,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045055,GO:0045087,GO:0045321,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046903,GO:0048046,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050832,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051247,GO:0051603,GO:0051704,GO:0051707,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060205,GO:0062033,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071944,GO:0090068,GO:0097708,GO:0098542,GO:0098827,GO:0099503,GO:0101002,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1904813,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252 EggNOG free text desc. threonine-type endopeptidase activity EggNOG OGs COG0638@1,KOG0179@2759 Ec32 ortholog description Proteasome, subunit alpha/beta Ec32 ortholog Ec-26_002800.1 EC 3.4.25.1 COG Functional cat. O Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01002,ko03051 Exons 4 Model size 2678 Cds size 759 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927372.7899215-UTR-C-linearis_contig102:560603..560698 1622927372.7899215-UTR-C-linearis_contig102:560603..560698 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 560604..560698 + 1690879661.088647-UTR-C-linearis_contig102:560603..560698 1690879661.088647-UTR-C-linearis_contig102:560603..560698 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 560604..560698 + 1622927372.8655334-UTR-C-linearis_contig102:563826..565650 1622927372.8655334-UTR-C-linearis_contig102:563826..565650 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 563827..565650 + 1690879661.1402562-UTR-C-linearis_contig102:563826..565650 1690879661.1402562-UTR-C-linearis_contig102:563826..565650 Chordaria linearis ClinC8C monoicous UTR C-linearis_contig102 563827..565650 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927372.806149-CDS-C-linearis_contig102:560698..560724 1622927372.806149-CDS-C-linearis_contig102:560698..560724 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 560699..560724 + 1690879661.1013365-CDS-C-linearis_contig102:560698..560724 1690879661.1013365-CDS-C-linearis_contig102:560698..560724 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 560699..560724 + 1622927372.816225-CDS-C-linearis_contig102:561015..561138 1622927372.816225-CDS-C-linearis_contig102:561015..561138 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 561016..561138 + 1690879661.1137927-CDS-C-linearis_contig102:561015..561138 1690879661.1137927-CDS-C-linearis_contig102:561015..561138 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 561016..561138 + 1622927372.8369794-CDS-C-linearis_contig102:561798..561990 1622927372.8369794-CDS-C-linearis_contig102:561798..561990 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 561799..561990 + 1690879661.1238325-CDS-C-linearis_contig102:561798..561990 1690879661.1238325-CDS-C-linearis_contig102:561798..561990 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 561799..561990 + 1622927372.8538356-CDS-C-linearis_contig102:563408..563826 1622927372.8538356-CDS-C-linearis_contig102:563408..563826 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 563409..563826 + 1690879661.1318407-CDS-C-linearis_contig102:563408..563826 1690879661.1318407-CDS-C-linearis_contig102:563408..563826 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 563409..563826 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.809.1
>prot_C-linearis_contig102.809.1 ID=prot_C-linearis_contig102.809.1|Name=mRNA_C-linearis_contig102.809.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=253bp
MSQGPAPHSAAPIWHSEGTKNVEVLSSGIDHGVTQNPFERRWSPYDFNGG back to top mRNA from alignment at C-linearis_contig102:560604..565650+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.809.1 ID=mRNA_C-linearis_contig102.809.1|Name=mRNA_C-linearis_contig102.809.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5047bp|location=Sequence derived from alignment at C-linearis_contig102:560604..565650+ (Chordaria linearis ClinC8C monoicous)AGCAAGATCATTTCATTGCTCTCTCCAACGCACCCTCTGTACTATCTCGT
GGTGAAGGCAGGCCCATCTTCAGCGCGCTTCAGGAAGGAAGCACC ATGTC
CCAAGGACCTGCACCGCACAG GTAACATCCTTCAGACACTCCACCGAAGA
TGCAGCTTGTGCTACTTGTTTGTGCGGCATCCATGGAATTCGGTGTAGAC
GAGTAGTGTAGTCCGATGCCACCAACAGCCCCGCGTGTGTGTGGTGTGTG
TGTGCACAAGTCGTATGTGCGTTGTTTGGATCGTAAAATTGGCTCTCAAG
CTGACTCCACGGCTCTAGTCGTTCGTTGCGTTCGGGAGCTGTCGTGTGCC
TGGTCCCCAAAAACCCTCCCTTTTTCTCCCTATCCCGTTTCGCTCTTTCT
CATCATTCCTAGTGCGGCGCCTATATGGCATTCGGAGGGTACAAAGAATG
TGGAGGTGCTTTCGTCAGGGATCGACCACGGGGTGACTCAAAATCCATTC
GAGCGGAGATGGAGCCCGTATGACTTCAATGGCGG GTGAGGCGGAATTGA
GAACAATCTCTTGCGCACATCGTCCGCTCCGTACTTCTAGATGAGTATTT
GTAGCACCACCGGCAGGAGAACACACGACCTCCTGCACCCACCTGCTGGG
TGGCCTGTGAATGTAGTCGTCTCGTTTGCTAAGGCTCCATGATTAATGTT
TTTGTGCGAAATGCCTCTTGTGAAAACAGTTTGTGATTTTGTGTAACAAT
TGTTCATTGTTTTCGGAACGAGCGAGCGAGGGTCTTTTGACCCTCTGACC
CAACCTCCTTTCACGAAACTGCTGTCATCATGCGGACACCCTGTCCTACC
CGGCCTTGGTGGACCATTCGTTGAACGCTGTTCACCTGTTATCTGACCTA
GGTGCGTTGTTTCCATGTGGTACGCGACCCTCCAATGACTCAGCTAGCTT
GAAATCGGTAGAGCATGGTACCCAACCAGTACAACCAGGTTGCCGTATGG
TGCACTTCGGGTATTTTCGTATTTTCCCTCTCCTTTGATAGATGCCCATT
GAAAAAATCCAAGCTTGGGGAATGAGCGAGTTCATGAAAGAAGGTATTGG
TACAGAGGCAGGAACAGCAGTCCCACGTATCGTTGACCTGCTTGGTATAC
ATTCTCTTGTCCTTTTCGTCTTTCGAAACGTTGTGCCACCTCCAGCACTA
CCCTTGCTATCGCAGGGGCCGACTACGTGGTGGTTGCAGCCGACACCCGG
ATGAGCACAGGATATTCCATTATGTCACGTGATCAGACCAAGCTGCATCA
GCTCACATCCAAGTGCGTGATCGCTTCTGCTGGTTGCAAAACCGACGTTA
CAACCCTTTGGAAGGAGCTGGACGTGAGCATGACCAT GTAAGTGTGAACT
GGCCACGATTGGTTGTGCGAGCATTATTTCCCTTTCTCTGGCATTCTCCC
AACCTGATTTTTTTTTTCGCAGACTCGCAGCGCACAGGCCGCTCCAAACA
GAGCACCTGTTTGTTCGTTCGTCTGAAGCGACTAGAATACGGTGTCATTC
GTTGAGTTGAGACCGTAGAAGGCGACAGGGATACTTCTTAGGTGCAACTC
AACTGTTCGATTCAAGCATCAGCAACCCTTGACAAGCTGCAGGATTGAGA
ATATGACGACGCTTATATACCACCGAGTAGCCCTCTTTGCGGTCTTGATT
CACACGATACCGTCGGGCAACGGTGCCACCCCTCTCGCCGAACTCATGAA
CCCAAAGTTCCAGCTACCTGCTGTACATCTCTGGCGGAACGCCCACTTGT
GACCGTCAAAATAACTAAACGCTGTTGCATAACGCGTGAAAATCCTGTCA
CAGTCAGTCCGCTGCGTGTCGTCACCGCTTGCATAGCCTTGGGGGGACTG
CTGTTCTGGATCATTGATCCGGCCGATTGAAACCAATATTGAAGGTTCTA
GTTGCAGACTAGCCGCAGTTCTGCACCTCTGCAATACCAACTCTTTTTTC
TCGAAACACCTCGCAACTGCGCACGTGTTGTTTGGTCAGCCCCCTCTTTA
TTAGTAGACTGTGCCTCAAATTTGAACGGGTACCGATAAAATCTGCATCC
ATGGCCGTTGGTTGGCCCACAGAATGGTCTAGTATTCAAGATCAGCATGT
ACACATAGTGGGGGATGCATCATTTGCGAGTTTGATGCTTGTGGTATTTT
GTTGCAGAAAAGGAGAGCCACCTACATTGTTTCGGGCGGAGATTGATCGT
CCCAAGCAGTTTCTTGCGGTAGAGGCCAGATTTGCAAGCATGTACACAGC
CAGTATCGTGGTAGTTGGCGTCGTTAAAGGATGTAATAGATTCACCGTTA
CACACCATGTGATATGACATGGCACGGTTCGCCTTCGCTCTCCATCTTCT
AGCACGTCCTCACACATAGCGGTTTGACTGGTAACTGTACTTACCGCCAA
TGTGCGCGCGATGGCACGCCCCCAAGGCCGATTTTCGAAAGCAGATTGCT
CTACAATGAGGAGCACGACGGCGTTATTTGGAAAGGTCTTCTTGAGTGCT
ACCAGTGACGTATCTTTCCCCGTGGTTGTGGAGTAACCCATTCCCGAATT
GAAAATTGGTCTTGGCGGGGTGCCATCACATACACAATTTCACGGCGCTG
CCCCACGACTAAAAGCTCGAAACTTTGAAGTTGAAGTGCCTGCCTGGTGC
ATGGTCGCGTGCCTATTTTTCCGTCCAGCCCTGCGATTTTCTTGGATTCC
ACCTGAGAGCTTTTGCACGATCATGCTTGTTTGCACGCGCGTGCCTCACT
TGCAGGTATGACCACAACATGGAAAAGGAGATGGCCACCCCAGCTGTGGC
GCAGATGCTTGCGAACACCCTCTACTACCGGCGATTCTTCCCGTACTACT
CGTTCAACGTCTTATGTGGCCTTGATGAGCAAGGGAAAGGATCTGTGTTT
TCCTACGACGCTATCGGGTCGTTCGAACGAGTGCCGTACAGTGCGTCAGG
CTCTGGCCAGACCTACATCATTCCGCTCCTTGACAACCTAGTAGAATTCA
AAACACGGCAGGACGAGAAGCCTACCCGTTCTGCTCCTGATACGGTGGAG
TTGGTCAAAGAGCTTTTCGTTACGGCAGGAGAACGCGATATCTACACCGG
GGACGCGGTAGAGATCACAGTTATCTCAAAAGATGGCACATCGACACAGA
TGTTTCCTCTGAAGAAGGACTAA GCGTGTTAAAGAGAGGGTTGTGGGGCA
CTTGTGGGGTCTAGTGTTGGTATTTATATTTGACATGCTTTTCGAGCGCA
CTAACACAGTGTTTTGTGCTTCTGACAATTCATGGTAACGTATCCAGCAG
CGCAGGGCCCAATTGGGTGCCGTGGTGAGGCCAGTGGCGTGGCAAATGTT
CGTGAGGATCTTTGGTCCTGTCTTTTGACTTGTACGATTTCTGACGGGTC
ATGCCTCGCGTGTATTCCTTGTGGCAAAAGCGCGATCCGGTTCTGCACGA
TGGTTGCAAACGCCGAATTACGGGCACAATCGAGGGTTTGCACTGGACCA
GGACTCGATCCCAGCTATAGGCTGGGCACCTATGACACGTTGCACGCCCC
GCCCCTCCTGAACGCCGTAGGAGTTGTGTTGTTTCGCCGTGACGATGCGC
CATGCATGGTCACTCTAGACGTAAAACAGATTTGGCTCCGATTCACGAAA
CCAACAAAACCATACACTCCAAAATGTTTTTCGACAATGGTGAGCTTGTC
AAAAGTCCTTTAAACCAGGAGCCAATCCGCCATCCTTGGAATACTCACTC
TGTCATGAGTTAAGTAAGGTACAGGTTCGCGAGGTAAGCGCTGGGAGAGC
TACCTGTCTGATCCGTCATGACCAGTCTCTCGTCTCTTCTCAGCCAGGGA
GAGCTTGGTGAGACGAGCGGATAGGGTCGATAGAATCATACGGAATAGCG
GGATACGTTGGACAGAGTAAACAGGTGATACGTTCACGTGAAGGGGTCAG
ACTTTGTTGTCGGGGTGTTGATCAGTTATCTCTGGGGCCGTTCGTTCAGC
ACAAGTTCGTGTCGCAATGCATTTTTGGGTGTGACGAGAACTATAGGAAT
TTCATTGTTCGCATGGCTGTGTTTGCCGTTTTCTCCGGGCGCTCCTATAA
CCCCATCCATCCAAAGACTCACACCCATCCATGCGCTCTGATGAAGTCGC
TGTTGGAGTAGACGAGTCCTGCTGACAGGTGAGGATGCGCGCAATAGCAC
CATGTAGACGTCGGCCACCAACTTGGGTATGATTTGGACCTGGGCCATAG
GACCTTGGGCCGGGGCCGTTGAGGATACGAGGATACACGCAGGGGATTCC
GTCGTAAGAAAGGTACCCTGATATGAAACTGCGTCGCCCCTGGTGGAGAT
TCATTCAGTAGAGTTTATACAGAATTTAGGTCGGGTGAACTTTTGGGGCC
AGATTCGCGTTTTATGTATATTCGGGCTCCAAGCCCCCCCGATATAAAAC
TCGATATTCAGGTAAATCTCGGTTCTTGAGGATAAAATCATGGGACTGAC
TGTCGTCAGCTCGAGGGCAGGAGGGAAAAACAAAACTCGTTTTGTGGGGC
GGGGTCCTCGTTGATTTCCTGAATGTTAAAAGATACCGTAGATGCGAGGG
TGGGAGAAGAAGCTGTAAATTGGAGAGGAACGTAGTCGCCGACTGGCTGC
TGTGGGTTTTGAGGTGTGGCGGCAGCTGACCCCTGCCCGAACTGCGGACT
GGTATTGTTCAAGGGGGGAGTGTTCGAGCGGGGAGCAATATTCCATATTC
CGCCAATTCCTCGGGAGAGAGCGGTTGTTGCGCCTGAGACGGCTCCTCCT
GCGAAACACTCTCCTCGCCGCAACACTGGTGTGTTGGTGTGTGTATCGCA
CGACCCCCACCCGCTGGGCGCTGAAAGTATGTGGCGCAACTTAGCTTTTG
CCGCCGCGTCCGGACTGCTCTGAGTCTCTTGAGTGCTGTGCGGATTGTGC
GCGGTTGGAAGAAGTGTGGGTGTGTCTCATTTTTCCCGGTCTGCGTG back to top Coding sequence (CDS) from alignment at C-linearis_contig102:560604..565650+
>mRNA_C-linearis_contig102.809.1 ID=mRNA_C-linearis_contig102.809.1|Name=mRNA_C-linearis_contig102.809.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at C-linearis_contig102:560604..565650+ (Chordaria linearis ClinC8C monoicous) back to top