mRNA_C-linearis_contig102.788.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match: D7FH18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH18_ECTSI)

HSP 1 Score: 551 bits (1420), Expect = 5.890e-180
Identity = 436/913 (47.75%), Postives = 512/913 (56.08%), Query Frame = 1

Query:    1 MPNPSLAYCCGGVENNLTPLGERRRKLPLQRKVKQLERPWKA--ANTQAVEPHGVTWASSQQGNTDLPRVGVRPRSGALACRNRSGKKKGSNRPMRNSASASSGLSXXXXXXXXXXXXXXXXXXRQR-SWGNQPPSPLPVDPTWNGSAGVDWDGTGTCIRG-PRGKPQQAHIAAVHGYGYRPGSPGGEGNGHAELVGNQAVRTVADATLTSLVSSRSFFATSSVITTGAA---ENIGCGEEVDPIHKASKLVDPPSCHSXXXXXXXXXXXXXXXXXXXXSYNNKSIVSLGSMDQVGLSVGVGSGAAVKRPNSAGLSTARGTFVHPLVLMGDK-VIRPRTAGPSSRGRAGQPRSASGESRLNERGRTPTSSRPGPEKGGCS-VTSWTDETPDAGSLLECKTSVSVVLPTLEEGNDTGDKSVFLPGSAQETPSRGESEV-----------GPES--------PGQAESLVVDIGNAQSKAKNSSQAHLQESWKRSDDNAGQRASSVQNGSTLLGTCAPHISALGYFVGDSR-QTVMQVGAALHGRALVGNHH--PRPSTSKRSLPSPPALTPGEQSYGIAHPLSPTSMGSPPRRHRNSNWGEEGVRLAVEEKENSRKTVPFIVSGTLLGWKLSTRERKKSLVDSLKNSDYSEHHLIPVYGFRRGNEDPNESEVGGGEGSNGGGRI--AIGAEERRMELXXXXXXXXXXXXXXXXRRARAEGGAGGAAFARAMCRRATDRAEWIQKMGDVHDVRKGNVFRGSSPEELSAYRKRVRDRLHGERMRRRTARGLPSSRPQRISAVTSRADFPSACRKGNNLTTTDNNDGGKRACDDERDGAGGSDGNDLIRDELGPIQDELGREPYLMLVRAKTKSSQEGEATR--GAEDTGAVVGPSV--QFCSECLGCCQGACSPGG 2628
            M N +   C GG + +LTPLG+RR +LPLQRKVKQLERPWK   A  Q + PH  TWASSQ  + D      RPR+     R       G    MR S SA S                     R R S G  P S   + P W+ S  V    T T     P  +P    IA + G GY    PG  G+    +   + V+   DATLTS +SS S  A  SV TTG A   E  G G+  D I  A ++V  PS   XXXXXXXXXXXX        S NN S+ S   +          +  A KRPNSA +  AR + ++PL       V RPRTAG  SRG A  P   S +S +  R  T  S RP  EK GC+ V +W +E    GS +EC+ SVSV LP LE+ NDT D+  F PGSA ET +RGE  V           GPE         PG+   L V I  AQSKA   ++ +  E+ + S +N   R         LLGT +PHISALGYF+ + R Q        LHGRAL G++H  PR S S+  LP PPA+TPGEQ YG AHPLSPTSMGSPPRRHRNSNWGEEG RLA EE EN+R+T+PF+VSGTLLGWKLSTRERKKSL DSLK SDYSEHHLIPVYGFR  ++   E + GG EG   GGR    +G EERR EL                RR+RAEGGAGGAAFARAM RRA  RAEWIQKMGDV DVRK NV RGSSPE L AYRKRVR+RL+GER+R+R ARGLPS +P RISAVTSRADFPSA  K                                    +  IQDELGREPYLMLVRA+++ S E E +   G  +   V   S+  +FCS+C+G C+G CSP G
Sbjct:   15 MANSNSGCCGGGADGDLTPLGQRRSRLPLQRKVKQLERPWKHTDAGAQVITPHHPTWASSQPVSKDGRYPDARPRTSTPVARKSRASVCGV--MMRTSVSAKS-----------VRPTGCGTTARPRPSTGLSPSSSRLLSPAWSTSEPVLLSTTRTTDTAEPAVEPG---IAFIRGCGYSL-DPGRRGDNEGAVGNKRPVQISTDATLTSAISSPSLLAAMSVTTTGPAASTEGDG-GDPDDKIVGARQVVSTPSXXXXXXXXXXXXXXX--------SKNNPSVESARHVSSADAVAHGAARRAAKRPNSAAI--ARASSLNPLAQRAKTDVRRPRTAG-CSRGHAVDPYLLSDDSAVIGRSITSVSFRPDLEKEGCAAVANWENE----GSSIECRPSVSVTLPMLEDCNDTRDRR-FSPGSATETSTRGELGVDSRPSCSTVNCGPEEFNTAPRERPGEPRRLGVAI--AQSKAGLDNRKN--EALRHSGENCSSR-------DPLLGTHSPHISALGYFIEEPRPQAAPSASPGLHGRALFGSNHRRPRSSPSRPPLPPPPAITPGEQPYGDAHPLSPTSMGSPPRRHRNSNWGEEGARLAAEEAENARQTIPFVVSGTLLGWKLSTRERKKSLEDSLKASDYSEHHLIPVYGFRSNDDKEQEDDPGGTEG---GGRRDRTMGVEERRKELRRVEARALAAERASMERRSRAEGGAGGAAFARAMSRRALARAEWIQKMGDVLDVRKDNVCRGSSPEVLCAYRKRVRNRLNGERLRQRKARGLPSRKPPRISAVTSRADFPSAAAKNKAQPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSLIQDELGREPYLMLVRARSRYSLEQELSSRGGGSNKKFVASTSICARFCSDCVGGCKGTCSPDG 879

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BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match: A0A6H5K6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K0_9PHAE)

HSP 1 Score: 187 bits (474), Expect = 5.140e-51
Identity = 119/157 (75.80%), Postives = 128/157 (81.53%), Query Frame = 1

Query: 1663 MGSPPRRHRNSNWGEEGVRLAVEEKENSRKTVPFIVSGTLLGWKLSTRERKKSLVDSLKNSDYSEHHLIPVYGFRRGNEDPNESEVGGGEGSNGGGRI-AIGAEERRMELXXXXXXXXXXXXXXXXRRARAEGGAGGAAFARAMCRRATDRAEWIQK 2130
            MGSPPRRHRNSNWGEEG RLA EE EN+R+T+PF+VSGTLLGWKLSTRERKKSL DSLK SDYSEHHLIPVYGFR  ++   E + GG E   GG R   +G EERR+  XXXXXXXXXXXXXXXX   RAEGGAGGAAFARAM RRA  RAEWIQK
Sbjct:    1 MGSPPRRHRNSNWGEEGARLAAEEAENARQTIPFVVSGTLLGWKLSTRERKKSLEDSLKASDYSEHHLIPVYGFRSSDDKEKEDDPGGTE--EGGCRDRTMGVEERRVXXXXXXXXXXXXXXXXXXXXXRAEGGAGGAAFARAMSRRALARAEWIQK 155

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BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match: A0A6H5K5A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A9_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 7.370e-31
Identity = 86/170 (50.59%), Postives = 103/170 (60.59%), Query Frame = 1

Query: 2131 MGDVHDVRKGNVFRGSSPEELSAYRKRVRDRLHGERMRRRTARGLPSSRPQRISAVTSRADFPSACRKGNNLTTTDNNDGGKRACDDERDGAGGSDGNDLIRDELGPIQDELGREPYLMLVRAKTKSSQEGE-ATRGA---EDTGAVVGPSVQFCSECLGCCQGACSPGG 2628
            MGDV DVRK NV RGSSPE L AYRKRVR+RL+GER R+R ARGLPS +P RISA+TSRADFPSA                                       +  IQDELGREPYLMLVRA+++SS E E ++RG    + + A    S +FCS+C+G C+G CSP G
Sbjct:    1 MGDVLDVRKENVCRGSSPEVLCAYRKRVRNRLNGERRRQRMARGLPSRKPPRISAITSRADFPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXVSLIQDELGREPYLMLVRARSRSSLEQELSSRGGGSNKKSVASTNISARFCSDCVGGCKGTCSPDG 169

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BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match: A0A6H5K4K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K6_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 2.530e-25
Identity = 143/409 (34.96%), Postives = 178/409 (43.52%), Query Frame = 1

Query:   10 PSLAYCCGGVENNLTPLGERRRKLPLQRKVKQLERPWKAANTQAVEPHGVTWASSQQGNTDLPRVGVRPRSGALACRNRSGKKKGSNRPMRNSASASSGLSXXXXXXXXXXXXXXXXXXRQRSWGNQPPSPLPVDPTWNGSAGVDWDGTGTCIRGPRGKPQQAHIAAVHGYGYRPGSPGGEGNGHAELVGNQAVRTVADATLTSLVSSRSFFATSSVITTG-AAENIGCGEEVDPIHKASKLVDPPSCHSXXXXXXXXXXXXXXXXXXXXSYNNKSIVSLGSMDQVGLSVGVGSGAAVKRPNSAGLSTARGTFVHPLVLMGDK-VIRPRTAGPSSRGRAGQPRSASGESRLNERGRTPTSSRPGPEKGGCS-VTSWTDETPDAGSLLECKTSVSVVLPTLEEGNDTGDK 1227
            P+   C GG +++LTPLG+RR +LPLQRKVKQ+             PH  TWASSQ  + D      RPR+     R  +    G    MR S SA S  S                   + S G  P S     P W+ S  V    T T          +     + G GYR   PG  G+    L     V+T   ATLTS +SS S  A  SV TTG AA   G G+  D I  A ++   PS  S                    S NN  + S   +         G+  A KRPNSA +  AR + +HPL       V RPRTAG  SRG+A  P     +S +  R  T  S RP  EK GC+ V +W +E    GS +E + SVSV LP LEE NDT D+
Sbjct:   18 PNSGCCGGGADSDLTPLGQRRNRLPLQRKVKQV-----------TTPHHPTWASSQPISKDGRYPDARPRTSTPVGRRTAASVGGV--MMRTSVSAKSVRSTGCGTAART----------RPSNGLSPSSSGLRSPAWSTSEPVRLSTTRTTDTAE--SAVELGTTFIRGCGYRL-DPGRGGDNEGALGNKHPVQTSTGATLTSTISSPSLLAAMSVATTGPAASTEGDGDPDDKIGGARQIGSTPSGSSNKNFNDDEEDGN--------SENNPPMGSARHVSSADAVAHGGARRAAKRPNSAAI--ARASSLHPLARRAKTDVRRPRTAG-CSRGQAIDPYLLLDDSAVIGRSITSASFRPDLEKEGCAAVANWENE----GSSIEWRPSVSVTLPMLEECNDTRDR 385

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot

BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4

ZOOM

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POSITION

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Match Name	E-value	Identity	Description
D7FH18_ECTSI	5.890e-180	47.75	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K6K0_9PHAE	5.140e-51	75.80	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A9_9PHAE	7.370e-31	50.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K4K6_9PHAE	2.530e-25	34.96	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]