Homology
BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match:
D7FH18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH18_ECTSI)
HSP 1 Score: 551 bits (1420), Expect = 5.890e-180
Identity = 436/913 (47.75%), Postives = 512/913 (56.08%), Query Frame = 1
Query: 1 MPNPSLAYCCGGVENNLTPLGERRRKLPLQRKVKQLERPWKA--ANTQAVEPHGVTWASSQQGNTDLPRVGVRPRSGALACRNRSGKKKGSNRPMRNSASASSGLSXXXXXXXXXXXXXXXXXXRQR-SWGNQPPSPLPVDPTWNGSAGVDWDGTGTCIRG-PRGKPQQAHIAAVHGYGYRPGSPGGEGNGHAELVGNQAVRTVADATLTSLVSSRSFFATSSVITTGAA---ENIGCGEEVDPIHKASKLVDPPSCHSXXXXXXXXXXXXXXXXXXXXSYNNKSIVSLGSMDQVGLSVGVGSGAAVKRPNSAGLSTARGTFVHPLVLMGDK-VIRPRTAGPSSRGRAGQPRSASGESRLNERGRTPTSSRPGPEKGGCS-VTSWTDETPDAGSLLECKTSVSVVLPTLEEGNDTGDKSVFLPGSAQETPSRGESEV-----------GPES--------PGQAESLVVDIGNAQSKAKNSSQAHLQESWKRSDDNAGQRASSVQNGSTLLGTCAPHISALGYFVGDSR-QTVMQVGAALHGRALVGNHH--PRPSTSKRSLPSPPALTPGEQSYGIAHPLSPTSMGSPPRRHRNSNWGEEGVRLAVEEKENSRKTVPFIVSGTLLGWKLSTRERKKSLVDSLKNSDYSEHHLIPVYGFRRGNEDPNESEVGGGEGSNGGGRI--AIGAEERRMELXXXXXXXXXXXXXXXXRRARAEGGAGGAAFARAMCRRATDRAEWIQKMGDVHDVRKGNVFRGSSPEELSAYRKRVRDRLHGERMRRRTARGLPSSRPQRISAVTSRADFPSACRKGNNLTTTDNNDGGKRACDDERDGAGGSDGNDLIRDELGPIQDELGREPYLMLVRAKTKSSQEGEATR--GAEDTGAVVGPSV--QFCSECLGCCQGACSPGG 2628
M N + C GG + +LTPLG+RR +LPLQRKVKQLERPWK A Q + PH TWASSQ + D RPR+ R G MR S SA S R R S G P S + P W+ S V T T P +P IA + G GY PG G+ + + V+ DATLTS +SS S A SV TTG A E G G+ D I A ++V PS XXXXXXXXXXXX S NN S+ S + + A KRPNSA + AR + ++PL V RPRTAG SRG A P S +S + R T S RP EK GC+ V +W +E GS +EC+ SVSV LP LE+ NDT D+ F PGSA ET +RGE V GPE PG+ L V I AQSKA ++ + E+ + S +N R LLGT +PHISALGYF+ + R Q LHGRAL G++H PR S S+ LP PPA+TPGEQ YG AHPLSPTSMGSPPRRHRNSNWGEEG RLA EE EN+R+T+PF+VSGTLLGWKLSTRERKKSL DSLK SDYSEHHLIPVYGFR ++ E + GG EG GGR +G EERR EL RR+RAEGGAGGAAFARAM RRA RAEWIQKMGDV DVRK NV RGSSPE L AYRKRVR+RL+GER+R+R ARGLPS +P RISAVTSRADFPSA K + IQDELGREPYLMLVRA+++ S E E + G + V S+ +FCS+C+G C+G CSP G
Sbjct: 15 MANSNSGCCGGGADGDLTPLGQRRSRLPLQRKVKQLERPWKHTDAGAQVITPHHPTWASSQPVSKDGRYPDARPRTSTPVARKSRASVCGV--MMRTSVSAKS-----------VRPTGCGTTARPRPSTGLSPSSSRLLSPAWSTSEPVLLSTTRTTDTAEPAVEPG---IAFIRGCGYSL-DPGRRGDNEGAVGNKRPVQISTDATLTSAISSPSLLAAMSVTTTGPAASTEGDG-GDPDDKIVGARQVVSTPSXXXXXXXXXXXXXXX--------SKNNPSVESARHVSSADAVAHGAARRAAKRPNSAAI--ARASSLNPLAQRAKTDVRRPRTAG-CSRGHAVDPYLLSDDSAVIGRSITSVSFRPDLEKEGCAAVANWENE----GSSIECRPSVSVTLPMLEDCNDTRDRR-FSPGSATETSTRGELGVDSRPSCSTVNCGPEEFNTAPRERPGEPRRLGVAI--AQSKAGLDNRKN--EALRHSGENCSSR-------DPLLGTHSPHISALGYFIEEPRPQAAPSASPGLHGRALFGSNHRRPRSSPSRPPLPPPPAITPGEQPYGDAHPLSPTSMGSPPRRHRNSNWGEEGARLAAEEAENARQTIPFVVSGTLLGWKLSTRERKKSLEDSLKASDYSEHHLIPVYGFRSNDDKEQEDDPGGTEG---GGRRDRTMGVEERRKELRRVEARALAAERASMERRSRAEGGAGGAAFARAMSRRALARAEWIQKMGDVLDVRKDNVCRGSSPEVLCAYRKRVRNRLNGERLRQRKARGLPSRKPPRISAVTSRADFPSAAAKNKAQPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSLIQDELGREPYLMLVRARSRYSLEQELSSRGGGSNKKFVASTSICARFCSDCVGGCKGTCSPDG 879
BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match:
A0A6H5K6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K0_9PHAE)
HSP 1 Score: 187 bits (474), Expect = 5.140e-51
Identity = 119/157 (75.80%), Postives = 128/157 (81.53%), Query Frame = 1
Query: 1663 MGSPPRRHRNSNWGEEGVRLAVEEKENSRKTVPFIVSGTLLGWKLSTRERKKSLVDSLKNSDYSEHHLIPVYGFRRGNEDPNESEVGGGEGSNGGGRI-AIGAEERRMELXXXXXXXXXXXXXXXXRRARAEGGAGGAAFARAMCRRATDRAEWIQK 2130
MGSPPRRHRNSNWGEEG RLA EE EN+R+T+PF+VSGTLLGWKLSTRERKKSL DSLK SDYSEHHLIPVYGFR ++ E + GG E GG R +G EERR+ XXXXXXXXXXXXXXXX RAEGGAGGAAFARAM RRA RAEWIQK
Sbjct: 1 MGSPPRRHRNSNWGEEGARLAAEEAENARQTIPFVVSGTLLGWKLSTRERKKSLEDSLKASDYSEHHLIPVYGFRSSDDKEKEDDPGGTE--EGGCRDRTMGVEERRVXXXXXXXXXXXXXXXXXXXXXRAEGGAGGAAFARAMSRRALARAEWIQK 155
BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match:
A0A6H5K5A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A9_9PHAE)
HSP 1 Score: 130 bits (326), Expect = 7.370e-31
Identity = 86/170 (50.59%), Postives = 103/170 (60.59%), Query Frame = 1
Query: 2131 MGDVHDVRKGNVFRGSSPEELSAYRKRVRDRLHGERMRRRTARGLPSSRPQRISAVTSRADFPSACRKGNNLTTTDNNDGGKRACDDERDGAGGSDGNDLIRDELGPIQDELGREPYLMLVRAKTKSSQEGE-ATRGA---EDTGAVVGPSVQFCSECLGCCQGACSPGG 2628
MGDV DVRK NV RGSSPE L AYRKRVR+RL+GER R+R ARGLPS +P RISA+TSRADFPSA + IQDELGREPYLMLVRA+++SS E E ++RG + + A S +FCS+C+G C+G CSP G
Sbjct: 1 MGDVLDVRKENVCRGSSPEVLCAYRKRVRNRLNGERRRQRMARGLPSRKPPRISAITSRADFPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXVSLIQDELGREPYLMLVRARSRSSLEQELSSRGGGSNKKSVASTNISARFCSDCVGGCKGTCSPDG 169
BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Match:
A0A6H5K4K6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K6_9PHAE)
HSP 1 Score: 119 bits (299), Expect = 2.530e-25
Identity = 143/409 (34.96%), Postives = 178/409 (43.52%), Query Frame = 1
Query: 10 PSLAYCCGGVENNLTPLGERRRKLPLQRKVKQLERPWKAANTQAVEPHGVTWASSQQGNTDLPRVGVRPRSGALACRNRSGKKKGSNRPMRNSASASSGLSXXXXXXXXXXXXXXXXXXRQRSWGNQPPSPLPVDPTWNGSAGVDWDGTGTCIRGPRGKPQQAHIAAVHGYGYRPGSPGGEGNGHAELVGNQAVRTVADATLTSLVSSRSFFATSSVITTG-AAENIGCGEEVDPIHKASKLVDPPSCHSXXXXXXXXXXXXXXXXXXXXSYNNKSIVSLGSMDQVGLSVGVGSGAAVKRPNSAGLSTARGTFVHPLVLMGDK-VIRPRTAGPSSRGRAGQPRSASGESRLNERGRTPTSSRPGPEKGGCS-VTSWTDETPDAGSLLECKTSVSVVLPTLEEGNDTGDK 1227
P+ C GG +++LTPLG+RR +LPLQRKVKQ+ PH TWASSQ + D RPR+ R + G MR S SA S S + S G P S P W+ S V T T + + G GYR PG G+ L V+T ATLTS +SS S A SV TTG AA G G+ D I A ++ PS S S NN + S + G+ A KRPNSA + AR + +HPL V RPRTAG SRG+A P +S + R T S RP EK GC+ V +W +E GS +E + SVSV LP LEE NDT D+
Sbjct: 18 PNSGCCGGGADSDLTPLGQRRNRLPLQRKVKQV-----------TTPHHPTWASSQPISKDGRYPDARPRTSTPVGRRTAASVGGV--MMRTSVSAKSVRSTGCGTAART----------RPSNGLSPSSSGLRSPAWSTSEPVRLSTTRTTDTAE--SAVELGTTFIRGCGYRL-DPGRGGDNEGALGNKHPVQTSTGATLTSTISSPSLLAAMSVATTGPAASTEGDGDPDDKIGGARQIGSTPSGSSNKNFNDDEEDGN--------SENNPPMGSARHVSSADAVAHGGARRAAKRPNSAAI--ARASSLHPLARRAKTDVRRPRTAG-CSRGQAIDPYLLLDDSAVIGRSITSASFRPDLEKEGCAAVANWENE----GSSIEWRPSVSVTLPMLEECNDTRDR 385
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.788.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 5.89e-180 / Id = 47.75 Expect = 5.14e-51 / Id = 75.80 Expect = 7.37e-31 / Id = 50.59 Expect = 2.53e-25 / Id = 34.96 Sequence D7FH18_ECTSI A0A6H5K6K0_9PHAE A0A6H5K5A9_9PHAE A0A6H5K4K6_9PHAE
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Hectar predicted targeting category other localisation
Ec32 ortholog description hypothetical protein
Ec32 ortholog Ec-26_003160.1
Exons 5
Model size 2628
Cds size 2628
Stop 0
Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927369.7938762-CDS-C-linearis_contig102:389028..389526 1622927369.7938762-CDS-C-linearis_contig102:389028..389526 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 389029..389526 -
1690879658.678416-CDS-C-linearis_contig102:389028..389526 1690879658.678416-CDS-C-linearis_contig102:389028..389526 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 389029..389526 -
1622927369.8065877-CDS-C-linearis_contig102:389753..390096 1622927369.8065877-CDS-C-linearis_contig102:389753..390096 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 389754..390096 -
1690879658.6872866-CDS-C-linearis_contig102:389753..390096 1690879658.6872866-CDS-C-linearis_contig102:389753..390096 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 389754..390096 -
1622927369.8154671-CDS-C-linearis_contig102:390779..391334 1622927369.8154671-CDS-C-linearis_contig102:390779..391334 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 390780..391334 -
1690879658.6973116-CDS-C-linearis_contig102:390779..391334 1690879658.6973116-CDS-C-linearis_contig102:390779..391334 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 390780..391334 -
1622927369.8240674-CDS-C-linearis_contig102:392143..393270 1622927369.8240674-CDS-C-linearis_contig102:392143..393270 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 392144..393270 -
1690879658.7053192-CDS-C-linearis_contig102:392143..393270 1690879658.7053192-CDS-C-linearis_contig102:392143..393270 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 392144..393270 -
1622927369.835378-CDS-C-linearis_contig102:393719..393824 1622927369.835378-CDS-C-linearis_contig102:393719..393824 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 393720..393824 -
1690879658.7173376-CDS-C-linearis_contig102:393719..393824 1690879658.7173376-CDS-C-linearis_contig102:393719..393824 Chordaria linearis ClinC8C monoicous CDS C-linearis_contig102 393720..393824 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.788.1
>prot_C-linearis_contig102.788.1 ID=prot_C-linearis_contig102.788.1|Name=mRNA_C-linearis_contig102.788.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=876bp
MPNPSLAYCCGGVENNLTPLGERRRKLPLQRKVKQLERPWKAANTQAVEP HGVTWASSQQGNTDLPRVGVRPRSGALACRNRSGKKKGSNRPMRNSASAS SGLSSGRRRPSTVPTPSSSGLRRQRSWGNQPPSPLPVDPTWNGSAGVDWD GTGTCIRGPRGKPQQAHIAAVHGYGYRPGSPGGEGNGHAELVGNQAVRTV ADATLTSLVSSRSFFATSSVITTGAAENIGCGEEVDPIHKASKLVDPPSC HSSSSSSSSSNNNNNNNGDEEDSYNNKSIVSLGSMDQVGLSVGVGSGAAV KRPNSAGLSTARGTFVHPLVLMGDKVIRPRTAGPSSRGRAGQPRSASGES RLNERGRTPTSSRPGPEKGGCSVTSWTDETPDAGSLLECKTSVSVVLPTL EEGNDTGDKSVFLPGSAQETPSRGESEVGPESPGQAESLVVDIGNAQSKA KNSSQAHLQESWKRSDDNAGQRASSVQNGSTLLGTCAPHISALGYFVGDS RQTVMQVGAALHGRALVGNHHPRPSTSKRSLPSPPALTPGEQSYGIAHPL SPTSMGSPPRRHRNSNWGEEGVRLAVEEKENSRKTVPFIVSGTLLGWKLS TRERKKSLVDSLKNSDYSEHHLIPVYGFRRGNEDPNESEVGGGEGSNGGG RIAIGAEERRMELRRLEARALAAERMSLERRARAEGGAGGAAFARAMCRR ATDRAEWIQKMGDVHDVRKGNVFRGSSPEELSAYRKRVRDRLHGERMRRR TARGLPSSRPQRISAVTSRADFPSACRKGNNLTTTDNNDGGKRACDDERD GAGGSDGNDLIRDELGPIQDELGREPYLMLVRAKTKSSQEGEATRGAEDT GAVVGPSVQFCSECLGCCQGACSPGG back to top mRNA from alignment at C-linearis_contig102:389029..393824-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig102.788.1 ID=mRNA_C-linearis_contig102.788.1|Name=mRNA_C-linearis_contig102.788.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4796bp|location=Sequence derived from alignment at C-linearis_contig102:389029..393824- (Chordaria linearis ClinC8C monoicous)ATGCCAAACCCAAGCCTAGCCTACTGCTGCGGCGGGGTGGAGAACAACCT
TACACCGTTAGGAGAGCGAAGGCGCAAGCTGCCTTTACAACGGAAAGTCA
AGCAG GTGTGTTGACTCGCGGGCCACAAACACAACGACGCCAGATAGATT
CAAACATGCGGGGTGGCCGCATGCGCAGTAAATGTCTCTTGCCGCATTTG
GGTGTTGTGCTGCATGCAGAATGATAAACTGTTTGTGTTGTTGAGCCGGC
TTATTGGTCCCAACAAGACCCTCAGTATGAATGGGTCGTGGCATTGGAAC
GGCTATAACAGTCTCGTATCTGACCCAGCTCCTGACGTACGTAACTACAG
CAGCTAGCAGTTATCAAGTACCAAAACACACAGAACGCAGATCAGCGAGT
ACACCTGCAATATCGCAATATCCCTTTCGTATTTAAAGTTAACGGTTAGA
CGTTTTTCCGGTCTCTCGAGCTTAGGAGAGCGGGAGACAGCAACTCGATT
TCCCGCGTGGTGACTCGCACATTCGCCCGCCCACTGTATAACTCTGTCTA
CCAGCTCGAGCGGCCATGGAAGGCAGCCAACACACAAGCAGTCGAGCCTC
ACGGCGTAACGTGGGCGTCATCTCAGCAAGGGAACACGGATTTGCCACGT
GTTGGCGTGAGGCCACGATCTGGTGCTCTGGCGTGTAGAAATAGGAGCGG
CAAGAAAAAGGGCAGCAATCGGCCGATGCGAAATAGTGCTTCAGCGAGTA
GTGGGTTGTCATCCGGACGAAGAAGGCCGTCGACCGTACCCACTCCGTCA
TCATCAGGGCTGAGAAGGCAAAGGAGTTGGGGTAACCAGCCACCATCTCC
CCTCCCAGTCGATCCTACATGGAACGGATCGGCCGGCGTTGATTGGGACG
GCACAGGAACGTGTATTCGTGGACCGCGAGGCAAACCCCAACAGGCACAC
ATCGCTGCAGTCCATGGGTATGGATATAGACCGGGTTCACCCGGTGGTGA
AGGCAACGGGCACGCGGAACTGGTAGGGAACCAAGCCGTGCGAACAGTTG
CCGATGCCACGCTCACCTCTCTTGTCAGCTCGCGTTCGTTTTTCGCCACA
TCGTCTGTCATAACTACGGGTGCTGCGGAAAACATTGGTTGTGGTGAAGA
GGTGGATCCTATCCACAAGGCTAGCAAGCTCGTTGACCCACCCTCATGCC
ACAGTAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAAC
GGCGACGAGGAGGACAGCTATAACAACAAGAGCATCGTGTCTTTGGGTTC
TATGGATCAGGTTGGCCTCTCCGTTGGTGTTGGTAGTGGCGCGGCAGTGA
AACGGCCAAATTCTGCTGGCTTGTCAACCGCTCGAGGGACCTTTGTCCAC
CCGCTTGTTCTCATGGGCGACAAGGTTATTCGGCCTCGAACCGCAGGTCC
AAGCAGCCGAGGACGGGCGGGGCAACCCCGTTCCGCTTCGGGCGAGAGCA
GGTTGAATGAACGTGGCAGGACGCCAACATCGAGCCGGCCAGGCCCAGAG
AAGGGAGGTTGCTCGGTGACAAGCTGGACAGACGAGACTCCTGATGCTGG
GTCATTGCTTGAATGCAAAACGTCTGTGTCCGTCGTGCTTCCGACGTTGG
AGGAGGGGAACGACACAGGAGATAAGTCTGT GTCCGTCGTGCTTCCGACG
TTGGAGGAGGGGAACGACACAGGAGATAAGAGGTATTTTTGGCCTCGAGA
ATGGCACGTAAATCCGACGGAACACTTTTGCTGGCGTACCTCGGGGTGCG
ATTTTGACTCTGTTGCTTGTTGGACACGCCGGTGGCAAAAACACTCTGTA
GTCGCACCTTTTTCACGTTGTATACGGTCGCCCCGGTGGACTAGTGGTTT
AACCTCGAACCCACTAGCAGCAAAGTCTGGAGTTCAATTCCAAGCAAAGG
TGATTCTTTTGCGGCTTTGCAGGTGAAAGCGATAACATAGCTGAAAAAGC
TCGTGAGTACCAAACTTCGACTTAGCACGTTGACGAGGGAAAGGGGTAGC
TGCACCCTTCTCGCGATAAAATCCAAGGCAAGCACCGCAGGAGGAAGGTG
GGGCAAAAAAGACACCGAAAAAGAAGAAAAAAGCCCCAGCAGTGTTTATT
TACCCCCTCCTGTGTGACCCCGGTTGGTTCCAGTTGTACAGAAAAATACA
CTGAACAAGTGTAGTACTCTAAATACACCGCAACGTGTAGTACATGTCTC
GCCTTGATCGGAAAGGGACTGTCGCTAAAATAAATGGGACGAAAACACAC
ACACACACACATACTGCTCTTTTGGTTAGATTTTTGCTACCGAAGGCGGT
CAGATTTCGGTTCCATCACAGTATACATCCTTGTAGCAATCAACAACCTA
CACTGTTTTTTTCAACCTCTCACGAACAAGTAAAGCGCGTGTACCACCAA
CCGCACACCAAGATACGCACGAACTCCGGAAATCGTGCAGGTTTTTGCCT
GGTTCTGCCCAAGAAACTCCGTCCCGCGGCGAGTCCGAGGTAGGACCGGA
ATCACCAGGCCAGGCTGAGAGCCTCGTCGTAGATATCGGAAATGCCCAGT
CGAAGGCGAAGAACAGCTCACAGGCGCACTTGCAAGAGTCATGGAAAAGA
AGCGACGACAATGCAGGACAGAGAGCGTCGAGTGTTCAGAATGGTAGCAC
CTTACTGGGAACGTGCGCACCCCACATCAGCGCTTTGGGGTACTTCGTCG
GGGATTCTAGGCAAACCGTGATGCAGGTGGGCGCAGCACTGCATGGAAGG
GCGCTTGTCGGCAACCATCACCCTCGACCGTCGACTTCCAAGCGATCGCT
TCCATCTCCTCCAGCTCTAACACCCGGCGAGCAGTCGTACGGCATCGCCC
ACCCGTTGTCGCCCACAAGCATGGGCAGCCCTCCTCGCAGACATCGGAAC
TCAAACTGGGGCGAAGAAGGGGTGCGTCTGGCAGTAGAGGAGAAGGAGAA
CTCCCGCAAGACCGTTCCTTTCATCGTTTCGGGCACTTTGCTAGG GTGAG
ATGCGTAGGGTGTCGCGGTGTTCATTTGGAAGAATTGTATATATCGGTTG
ACCTCGATCGATATTTCATCTCTATGGGCGTTTTCCTAGCACAGCAGCAC
GTAATAGAGCGGGCGATATAAGGTAGACGTTCGTTGGTTACCCCGAAGTT
GGATTGCTACTGTACCTTTATTGGTTGAACTCGAGCGTTTGAAGAGGACG
AAAGCTTGCTCTCGAAAGTCCAAGAGATTCCCCTCCCCCCCAACGGTCTT
AACACGTCCACGCATCGGGAACGATCATAACACATGGTTTTTAAACGGTG
ATGCACCCACGAGGCAGCTACGAAGTCTACCCTTGACTCTTTGGAAGAGG
TGAACCAGAAAGCGAAGCTGTTTATCCACGAGCAAGGACGTACGTTCATG
AATACCCAGCAGGTGCACCTCACCCCATCATGCGACTCACCGAACATGCA
ACGGCGCTTCGCGCCTGCTCCGGCGAAACCCGGCGTTCACCGTCACGGCT
TCGTAGGATGCGAGGTCTATGGTCTAACGACTACGGCGTATTCGATCAAT
GAGTAGACCTACCCCTCCCCCTCGACCTGGCCCTCACTAAAGATGCTTCA
AGCCCCGCTTGTCCCACTCTCTACTCACCTCCGTCTCACAGCAAGAATGC
CCCCCGCTAAATTCATGCCAACCACCAGATGGAAGCTGTCGACGCGGGAA
CGGAAAAAGTCTCTCGTGGACTCGCTTAAGAATTCCGACTACTCCGAGCA
CCACCTCATCCCCGTCTACGGTTTCCGCCGGGGCAATGAGGACCCCAACG
AAAGCGAGGTTGGTGGAGGAGAAGGAAGCAATGGTGGTGGCCGTATTGCA
ATCGGCGCGGAAGAGCGGCGGATGGAGCTGCGGCGGCTCGAGGCGAGAGC
TCTAGCCGCGGAACGTATGTCTTTGGAACGGCGCGCGAGGGCAGAGGGCG
GCGCCGGGGGGGCGGCGTTTGCTCGGGCCATGTGTCGGAGGGCAACGGAC
AGGGCTGAATGGATACAGAAG GTACTGCTGTAGGTCAGAAGCGATCTCAA
CATTAGATTGCCTTCAGCTGCGTTTGCCTAAATCACGAAGAGTAAATGGC
GTGTTTCGATGAATCCCCATTTGACCTTGCGCGTCTTTCCACTAGCGCGT
ACCGAGTCTATGACAACCTCCCGGCCTCTTCCTCCGTCTGGACTTGGTTT
ATTCTTGTCTCCTTCCTCCCTCCATCCTGCTGTTTTTATGTTTTGCAGAT
GGGCGACGTTCACGATGTGAGGAAGGGGAATGTATTTCGAGGGTCTTCGC
CCGAGGAACTCAGCGCCTACCGCAAGCGCGTCAGGGACCGGCTCCACGGC
GAGCGCATGCGGCGGCGCACCGCGAGGGGGCTCCCGTCGAGTCGACCACA
GCGCATCTCAGCTGTCACCTCTCGCGCGGACTTCCCTTCAGCCTGTAGGA
AAGGCAACAACCTCACCACCACCGACAACAACGATGGCGGGAAGCGGGCT
TGTGATGACGAAAGGGATGGTGCCGGTGGTAGTGATGGCAATGACCTGAT
TCGAGATGAACTTGGTCCGATACAAGATGAGCTTGGGCGGGAACCGTACC
TTATGCTCGTGAGGGCCAAGACCAAAAGTAGTCAAGAGGGGGAGGCCACG
CGCGGCGCGGAGGACACTGGCGCTGTTGTGGGCCCTAGCGTCCAATTCTG
CTCGGAATGTCTTGGCTGCTGCCAGGGAGCTTGTTCACCTGGTGGA back to top Coding sequence (CDS) from alignment at C-linearis_contig102:389029..393824-
>mRNA_C-linearis_contig102.788.1 ID=mRNA_C-linearis_contig102.788.1|Name=mRNA_C-linearis_contig102.788.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5256bp|location=Sequence derived from alignment at C-linearis_contig102:389029..393824- (Chordaria linearis ClinC8C monoicous) ATGCCAAACCCAAGCCTAGCCTACTGCTGCGGCGGGGTGGAGAACAACCT TACACCGTTAGGAGAGCGAAGGCGCAAGCTGCCTTTACAACGGAAAGTCA AGCAGATGCCAAACCCAAGCCTAGCCTACTGCTGCGGCGGGGTGGAGAAC AACCTTACACCGTTAGGAGAGCGAAGGCGCAAGCTGCCTTTACAACGGAA AGTCAAGCAGCTCGAGCGGCCATGGAAGGCAGCCAACACACAAGCAGTCG AGCCTCACGGCGTAACGTGGGCGTCATCTCAGCAAGGGAACACGGATTTG CCACGTGTTGGCGTGAGGCCACGATCTGGTGCTCTGGCGTGTAGAAATAG GAGCGGCAAGAAAAAGGGCAGCAATCGGCCGATGCGAAATAGTGCTTCAG CGAGTAGTGGGTTGTCATCCGGACGAAGAAGGCCGTCGACCGTACCCACT CCGTCATCATCAGGGCTGAGAAGGCAAAGGAGTTGGGGTAACCAGCCACC ATCTCCCCTCCCAGTCGATCCTACATGGAACGGATCGGCCGGCGTTGATT GGGACGGCACAGGAACGTGTATTCGTGGACCGCGAGGCAAACCCCAACAG GCACACATCGCTGCAGTCCATGGGTATGGATATAGACCGGGTTCACCCGG TGGTGAAGGCAACGGGCACGCGGAACTGGTAGGGAACCAAGCCGTGCGAA CAGTTGCCGATGCCACGCTCACCTCTCTTGTCAGCTCGCGTTCGTTTTTC GCCACATCGTCTGTCATAACTACGGGTGCTGCGGAAAACATTGGTTGTGG TGAAGAGGTGGATCCTATCCACAAGGCTAGCAAGCTCGTTGACCCACCCT CATGCCACAGTAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAAC AACAACGGCGACGAGGAGGACAGCTATAACAACAAGAGCATCGTGTCTTT GGGTTCTATGGATCAGGTTGGCCTCTCCGTTGGTGTTGGTAGTGGCGCGG CAGTGAAACGGCCAAATTCTGCTGGCTTGTCAACCGCTCGAGGGACCTTT GTCCACCCGCTTGTTCTCATGGGCGACAAGGTTATTCGGCCTCGAACCGC AGGTCCAAGCAGCCGAGGACGGGCGGGGCAACCCCGTTCCGCTTCGGGCG AGAGCAGGTTGAATGAACGTGGCAGGACGCCAACATCGAGCCGGCCAGGC CCAGAGAAGGGAGGTTGCTCGGTGACAAGCTGGACAGACGAGACTCCTGA TGCTGGGTCATTGCTTGAATGCAAAACGTCTGTGTCCGTCGTGCTTCCGA CGTTGGAGGAGGGGAACGACACAGGAGATAAGTCTGTCTCGAGCGGCCAT GGAAGGCAGCCAACACACAAGCAGTCGAGCCTCACGGCGTAACGTGGGCG TCATCTCAGCAAGGGAACACGGATTTGCCACGTGTTGGCGTGAGGCCACG ATCTGGTGCTCTGGCGTGTAGAAATAGGAGCGGCAAGAAAAAGGGCAGCA ATCGGCCGATGCGAAATAGTGCTTCAGCGAGTAGTGGGTTGTCATCCGGA CGAAGAAGGCCGTCGACCGTACCCACTCCGTCATCATCAGGGCTGAGAAG GCAAAGGAGTTGGGGTAACCAGCCACCATCTCCCCTCCCAGTCGATCCTA CATGGAACGGATCGGCCGGCGTTGATTGGGACGGCACAGGAACGTGTATT CGTGGACCGCGAGGCAAACCCCAACAGGCACACATCGCTGCAGTCCATGG GTATGGATATAGACCGGGTTCACCCGGTGGTGAAGGCAACGGGCACGCGG AACTGGTAGGGAACCAAGCCGTGCGAACAGTTGCCGATGCCACGCTCACC TCTCTTGTCAGCTCGCGTTCGTTTTTCGCCACATCGTCTGTCATAACTAC GGGTGCTGCGGAAAACATTGGTTGTGGTGAAGAGGTGGATCCTATCCACA AGGCTAGCAAGCTCGTTGACCCACCCTCATGCCACAGTAGCAGCAGCAGC AGCAGCAGCAGCAACAACAACAACAACAACAACGGCGACGAGGAGGACAG CTATAACAACAAGAGCATCGTGTCTTTGGGTTCTATGGATCAGGTTGGCC TCTCCGTTGGTGTTGGTAGTGGCGCGGCAGTGAAACGGCCAAATTCTGCT GGCTTGTCAACCGCTCGAGGGACCTTTGTCCACCCGCTTGTTCTCATGGG CGACAAGGTTATTCGGCCTCGAACCGCAGGTCCAAGCAGCCGAGGACGGG CGGGGCAACCCCGTTCCGCTTCGGGCGAGAGCAGGTTGAATGAACGTGGC AGGACGCCAACATCGAGCCGGCCAGGCCCAGAGAAGGGAGGTTGCTCGGT GACAAGCTGGACAGACGAGACTCCTGATGCTGGGTCATTGCTTGAATGCA AAACGTCTGTGTCCGTCGTGCTTCCGACGTTGGAGGAGGGGAACGACACA GGAGATAAGTCTGTGTTTTTGCCTGGTTCTGCCCAAGAAACTCCGTCCCG CGGCGAGTCCGAGGTAGGACCGGAATCACCAGGCCAGGCTGAGAGCCTCG TCGTAGATATCGGAAATGCCCAGTCGAAGGCGAAGAACAGCTCACAGGCG CACTTGCAAGAGTCATGGAAAAGAAGCGACGACAATGCAGGACAGAGAGC GTCGAGTGTTCAGAATGGTAGCACCTTACTGGGAACGTGCGCACCCCACA TCAGCGCTTTGGGGTACTTCGTCGGGGATTCTAGGCAAACCGTGATGCAG GTGGGCGCAGCACTGCATGGAAGGGCGCTTGTCGGCAACCATCACCCTCG ACCGTCGACTTCCAAGCGATCGCTTCCATCTCCTCCAGCTCTAACACCCG GCGAGCAGTCGTACGGCATCGCCCACCCGTTGTCGCCCACAAGCATGGGC AGCCCTCCTCGCAGACATCGGAACTCAAACTGGGGCGAAGAAGGGGTGCG TCTGGCAGTAGAGGAGAAGGAGAACTCCCGCAAGACCGTTCCTTTCATCG TTTCGGGCACTTTGCTAGGGTTTTTGCCTGGTTCTGCCCAAGAAACTCCG TCCCGCGGCGAGTCCGAGGTAGGACCGGAATCACCAGGCCAGGCTGAGAG CCTCGTCGTAGATATCGGAAATGCCCAGTCGAAGGCGAAGAACAGCTCAC AGGCGCACTTGCAAGAGTCATGGAAAAGAAGCGACGACAATGCAGGACAG AGAGCGTCGAGTGTTCAGAATGGTAGCACCTTACTGGGAACGTGCGCACC CCACATCAGCGCTTTGGGGTACTTCGTCGGGGATTCTAGGCAAACCGTGA TGCAGGTGGGCGCAGCACTGCATGGAAGGGCGCTTGTCGGCAACCATCAC CCTCGACCGTCGACTTCCAAGCGATCGCTTCCATCTCCTCCAGCTCTAAC ACCCGGCGAGCAGTCGTACGGCATCGCCCACCCGTTGTCGCCCACAAGCA TGGGCAGCCCTCCTCGCAGACATCGGAACTCAAACTGGGGCGAAGAAGGG GTGCGTCTGGCAGTAGAGGAGAAGGAGAACTCCCGCAAGACCGTTCCTTT CATCGTTTCGGGCACTTTGCTAGGATGGAAGCTGTCGACGCGGGAACGGA AAAAGTCTCTCGTGGACTCGCTTAAGAATTCCGACTACTCCGAGCACCAC CTCATCCCCGTCTACGGTTTCCGCCGGGGCAATGAGGACCCCAACGAAAG CGAGGTTGGTGGAGGAGAAGGAAGCAATGGTGGTGGCCGTATTGCAATCG GCGCGGAAGAGCGGCGGATGGAGCTGCGGCGGCTCGAGGCGAGAGCTCTA GCCGCGGAACGTATGTCTTTGGAACGGCGCGCGAGGGCAGAGGGCGGCGC CGGGGGGGCGGCGTTTGCTCGGGCCATGTGTCGGAGGGCAACGGACAGGG CTGAATGGATACAGAAGATGGAAGCTGTCGACGCGGGAACGGAAAAAGTC TCTCGTGGACTCGCTTAAGAATTCCGACTACTCCGAGCACCACCTCATCC CCGTCTACGGTTTCCGCCGGGGCAATGAGGACCCCAACGAAAGCGAGGTT GGTGGAGGAGAAGGAAGCAATGGTGGTGGCCGTATTGCAATCGGCGCGGA AGAGCGGCGGATGGAGCTGCGGCGGCTCGAGGCGAGAGCTCTAGCCGCGG AACGTATGTCTTTGGAACGGCGCGCGAGGGCAGAGGGCGGCGCCGGGGGG GCGGCGTTTGCTCGGGCCATGTGTCGGAGGGCAACGGACAGGGCTGAATG GATACAGAAGATGGGCGACGTTCACGATGTGAGGAAGGGGAATGTATTTC GAGGGTCTTCGCCCGAGGAACTCAGCGCCTACCGCAAGCGCGTCAGGGAC CGGCTCCACGGCGAGCGCATGCGGCGGCGCACCGCGAGGGGGCTCCCGTC GAGTCGACCACAGCGCATCTCAGCTGTCACCTCTCGCGCGGACTTCCCTT CAGCCTGTAGGAAAGGCAACAACCTCACCACCACCGACAACAACGATGGC GGGAAGCGGGCTTGTGATGACGAAAGGGATGGTGCCGGTGGTAGTGATGG CAATGACCTGATTCGAGATGAACTTGGTCCGATACAAGATGAGCTTGGGC GGGAACCGTACCTTATGCTCGTGAGGGCCAAGACCAAAAGTAGTCAAGAG GGGGAGGCCACGCGCGGCGCGGAGGACACTGGCGCTGTTGTGGGCCCTAG CGTCCAATTCTGCTCGGAATGTCTTGGCTGCTGCCAGGGAGCTTGTTCAC CTGGTGGAATGGGCGACGTTCACGATGTGAGGAAGGGGAATGTATTTCGA GGGTCTTCGCCCGAGGAACTCAGCGCCTACCGCAAGCGCGTCAGGGACCG GCTCCACGGCGAGCGCATGCGGCGGCGCACCGCGAGGGGGCTCCCGTCGA GTCGACCACAGCGCATCTCAGCTGTCACCTCTCGCGCGGACTTCCCTTCA GCCTGTAGGAAAGGCAACAACCTCACCACCACCGACAACAACGATGGCGG GAAGCGGGCTTGTGATGACGAAAGGGATGGTGCCGGTGGTAGTGATGGCA ATGACCTGATTCGAGATGAACTTGGTCCGATACAAGATGAGCTTGGGCGG GAACCGTACCTTATGCTCGTGAGGGCCAAGACCAAAAGTAGTCAAGAGGG GGAGGCCACGCGCGGCGCGGAGGACACTGGCGCTGTTGTGGGCCCTAGCG TCCAATTCTGCTCGGAATGTCTTGGCTGCTGCCAGGGAGCTTGTTCACCT GGTGGA back to top