mRNA_C-linearis_contig102.781.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A6H5JAV1_9PHAE (Plastocyanin-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV1_9PHAE) HSP 1 Score: 555 bits (1429), Expect = 4.600e-182 Identity = 311/569 (54.66%), Postives = 354/569 (62.21%), Query Frame = 1 Query: 1570 MSGAIIVEDPEGSLPPEVEAMREVVMVLQETNIESGALRNYKAASEISGSKMPLYGKGEGG---------------DGSKSDMLHFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTK-----EPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYL-SAPRLQGGGDGRVVLAPGSRADLAVRCDGPGAYRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSPTAMGENRLLQDLQQLPDNEVSRFVFEFNAAEKVSHLGQTYTWYGINGIQY-NASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVELAEDEGEGGGARVACERTDPGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMMMNFEIFEKL 3210
MSGAI+VEDPEGSLPPE+EAMREVVMVLQETNIESG LRNYKAASEI+GS MPLYG G G + +S++LHF TVNGQYQP+V+AQPGEA R+R++HGGNNDHMHVSLVP AA + G++E AE GG + + C LLTLARDGVYL APRLQ GG G VV+APGSRADLAV C+ G YRL SSKGG ++ +++SIM+YLG+ TDVFEGTLAF+DVGGD +DMELP KSP A G +RLLQDL+ +PDNEVSRFVFEFNAA+KVSHLG TYTWYG+NG+QY N+S ++RRVPLGSVEEWV+VNQRKGRGE G Q G V C+R PGEVT DGHPFHLH NHFQ VV SSWGD+GPDW+VGDWRDTISIP PGNVTIRW ADDFTGEAVAHCHIFGHSDTGMMMNFEIF+ +
Sbjct: 1 MSGAIVVEDPEGSLPPEIEAMREVVMVLQETNIESGTLRNYKAASEIAGSNMPLYGGGGGSSRAESKDEKGETAQDEEGESEVLHFATVNGQYQPIVQAQPGEAFRVRLIHGGNNDHMHVSLVPTDAAXXXXXXXXXXXXXQGGRREDGPAEDHSGGGKAS-------SGCTLLTLARDGVYLRQAPRLQSGG-GHVVIAPGSRADLAVLCEEAGVYRLASSKGG-------NDEEEQDSIMSYLGQETDVFEGTLAFVDVGGDALDMELPEKSPAAAGSDRLLQDLRDIPDNEVSRFVFEFNAADKVSHLGNTYTWYGVNGVQYTNSSHIMRRVPLGSVEEWVVVNQRKGRGE--------------------------------------------------------------------GEQ--------------------------GLPVGCDRGGPGEVTADGHPFHLHVNHFQ----------------------VVGSSWGDDGPDWSVGDWRDTISIPTPGNVTIRWRADDFTGEAVAHCHIFGHSDTGMMMNFEIFDSI 438
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: D7FH25_ECTSI (Multicopper oxidase, type 1 is implicated in celullar iron transport n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH25_ECTSI) HSP 1 Score: 482 bits (1240), Expect = 2.710e-154 Identity = 269/485 (55.46%), Postives = 307/485 (63.30%), Query Frame = 1 Query: 1762 KSDMLHFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLS-APRLQGGGDGRVVLAPGSRADLAVRCDGPGAYRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSPTAMGENRLLQDLQQLPDNEVSRFVFEFNAAEKVSHLGQTYTWYGINGIQY-NASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVELAEDEGEGGGARVACERTDPGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMMMNFEIFEKL 3210
+S++LHF TVNGQYQP+V+AQPGEA R+R++HGGNNDHMHVSL+PA A + +E + A G AS C LLTLARDGVYL PRLQGGG G VV+APGSRADLAVRCD G YRL SSKGG G+++G+E SI +YLG+ TDVFEGTLAF+DVGGD +DM+LP +SP A G +RLLQDL+ +PD+EVSRFVFEFNAA+KV HLG YTWYG+NG+QY NAS V+RRVPLGSVEEWVIVNQRKGRGE + C P EPID+ G S +G D GGAV G V C R PGEVT DGHPFHLH NHFQ VV SSWG +GPDW+VGDWRDTISIP PGNVTIRW ADDFTGEAVAHCHIFGHSDTGMMMNFEIF+ +
Sbjct: 35 ESEVLHFATVNGQYQPIVQAQPGEAFRVRLIHGGNNDHMHVSLIPADAXXXXXXXXXXXXXERREYSTAEDHSGGGKAS-----GGCTLLTLARDGVYLRPVPRLQGGG-GHVVIAPGSRADLAVRCDEAGVYRLASSKGG------GDDEGEEGSIRSYLGQATDVFEGTLAFVDVGGDALDMDLPEESPAAAGSDRLLQDLRDIPDDEVSRFVFEFNAADKVPHLGNMYTWYGVNGVQYTNASHVMRRVPLGSVEEWVIVNQRKGRGEGEQGCRPPP---------LPTPPRPNAKEEPIDAG--TGGSQNGDD------------------------------------EGGAVXXXXXXGR---VPVGCGRGGPGEVTADGHPFHLHVNHFQ----------------------VVGSSWGGDGPDWSVGDWRDTISIPTPGNVTIRWRADDFTGEAVAHCHIFGHSDTGMMMNFEIFDSI 435
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A835ZAK4_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK4_9STRA) HSP 1 Score: 346 bits (888), Expect = 1.140e-102 Identity = 238/711 (33.47%), Postives = 311/711 (43.74%), Query Frame = 1 Query: 1066 TAFSRDLTSPENRWSKDGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGSLPPEVEAMREVVMVLQETNIESGALRNYKAASEISGSKMPLYGKGEGGDGSKSDMLHFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCDGPGAYRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSPTAMGENRLLQDLQQLPDNEVSRFVFEFNAAEKVSHLGQTYTWYGINGIQYNASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVELAEDEGEGGGARVACERTDPGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMMMNFEI 3198
T +S L PE R+S G L TTL V + + GP+ SL R+Y+ VPGPTL ++PGD + + L N L G G D ID A + N TNIH HGLHVSP+G+ DNIYR+ PG+ L+Y Y +PP PG F+YHPH +GSS+VQ L GM+G IIV D ++P E+ AMRE+V V+QE ++ A I+ K + G L F VNGQ+QP++ + GEA+RLRVVH G ++ D C L +ARDG Y PR G V+++PGSRADL + C G +RL S+ D E + YLG + V GTLAF+ G ++ E P + L DL R++FEFN KV G+ YTWYG+NG Y+A V R VPLG+ E+W IVN G + GDVG+ T D HPFHLH NH+Q + +V ++ PDW +GDWRDTI++PAPGNVT+RW A DF G++VAHCH+F HSDTGM NFE+
Sbjct: 6 TEYSAPLRQPEKRYSAGGVLNTTLTVQSTIVELGPV--SLIGRSYDGQVPGPTLIIRPGDTVNLELHNRL----------GVGPAQGADAFIDNA------QGHDNYTNIHTHGLHVSPAGIADNIYRKCAPGETLRYRYSIPPSQPPGTFFYHPHLEGSSAVQMLSGMAGVIIVADDPVTVPAELAAMRELVAVVQEVDVPRMAT--------IALDKRVIRNAAPGA------ALQFFAVNGQFQPLIEVETGEAVRLRVVHAGE-------------------------------------------WTNADSAVCALHVIARDGAYHREPRTLPG----VLMSPGSRADLVITCRSSGTFRLHSA------------DLPNEDVDRYLGGKSRVRVGTLAFVTARGPRVRREEVMPLPPTLPARAL--DLITADVPAERRWIFEFNQGAKVLRAGRNYTWYGVNGQAYDARVVQRSVPLGATEQWTIVNAVYGEKGLLG--------------------------------GDVGA---------------------------------------------------------------------PPTRDNHPFHLHVNHYQAS-----------------RACIVDAAPSIYSPDWQIGDWRDTITVPAPGNVTVRWVAADFKGKSVAHCHLFSHSDTGMTANFEV 505
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: D7FH26_ECTSI (To be related with Esi0104_0074 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH26_ECTSI) HSP 1 Score: 331 bits (849), Expect = 1.110e-100 Identity = 171/263 (65.02%), Postives = 194/263 (73.76%), Query Frame = 1 Query: 898 IRAKGKTAVTLTLAIAA---LWGLSTLVVFDVRSNTSAGGGAIEPAGWQDRQPLDGEALTAFSRDLTSPENRWSKDGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGSLPPEVEAMREVVMVLQETNIESG 1677
IRAK +TAV +TLA AA L GL+ + VF S+ +A GWQ+RQPL G LTAFS +L SPENR+SKDGELRTTLR+AP V +AGPLAP LNVRAYE SVPGPTLRVKPGDRL GKVEAWPNVTN+HVHGLHVSPSGV DNIYRRA PGD+L+Y+Y+LPPDHYPG FYYHPHF+GSSS+QTLGGMSGA++VEDPEG+LPP++EAMREVVMVLQETNIESG
Sbjct: 32 IRAKPRTAVAVTLATAAVATLSGLALVQVFGAGSDVAAAAAGSASTGWQERQPLAGPTLTAFSENLKSPENRFSKDGELRTTLRIAPTVAKAGPLAPPLNVRAYEGSVPGPTLRVKPGDRLV-----------------------------------GKVEAWPNVTNLHVHGLHVSPSGVSDNIYRRANPGDSLEYVYDLPPDHYPGTFYYHPHFEGSSSMQTLGGMSGALVVEDPEGTLPPDIEAMREVVMVLQETNIESG 259
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A2D4BR45_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BR45_PYTIN) HSP 1 Score: 249 bits (635), Expect = 6.380e-68 Identity = 206/736 (27.99%), Postives = 287/736 (38.99%), Query Frame = 1 Query: 1132 TLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGSLPPEVEAMREVVMVLQETNIESGALRNYKAASEISGSKM---PLYG---------------------------------KGEGGDGSKSDMLHFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCDGPGA-------YRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSPTAMGENRLLQDLQQLPDNEVSRFVFEFNAA-EKVSHLGQTYTWYGINGIQYNASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVELAEDEGEGGGARVACERTDPGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMMMNFEIFEK 3207
TLRVA GP+A R YE S+P P L ++PGD L V VN+L G E G + PN TNIHVHG+HV P+G+ DN+ R PG+ + +P +H G+ YYHPH+ GS ++Q GGM+GAI+VED E +LP E + MR V++LQE + G + + +E S S++ P Y K G + F NGQ+ P + QP E + LR+V+ GN + +++ PG C + +A+DG+YL APRL ++L+ G+RAD+ +RC P + R + SK + ++ ++LG TDVFEG +AF+ V G DM ++P + LP + F FEF+ + K G Y Y IN + +N + + R + LG V+EWVIVN R+ + G V HPFH+H N FQ +V+ S G G D+ VGDWRD I++P PGNVTIR DF G VAHCHI GHSD GM+ +IFEK
Sbjct: 2 TLRVAATRFSNGPIA--FWTRTYEHSIPAPVLSLRPGDTLHVEQVNEL----------GPNEPG---------TWSPNTYHDPNSTNIHVHGMHVDPTGISDNVLRTLAPGETMVSRIRIPENHPRGVSYYHPHYHGSVNIQIAGGMAGAIVVEDDEDTLPDEYKHMRRHVVMLQEFRFDGGPGSDLRQIAEXSRSRLDMRPEYTPKVLLDEQVRTLFPYVARTPQTTVEGVGISAALKAHRGHRGRPSXSRFFVANGQFLPKLEVQPNENVLLRLVNAGNGATLELAI---------------PG--------------------------CTMHVIAQDGIYLRAPRLSK----LLLLSSGARADVVLRCLPPDSNDPHRESLRPLFSK-------------KDVTVXSFLGAGTDVFEGIVAFVHVSGPSRDMRAVERAPPVPALYA-----RDLPASAKDPFRFEFSMSMTKQKKDGFMYKQYFINHVPFNLTSM-RNLTLGVVDEWVIVNDRE--------------------------------------------------------------------------------------------------------------EDGSVATKNHPFHIHTNAFQ----------------------IVAMSHG-AGVDYEVGDWRDVIAVPTPGNVTIRLKPMDFAGRIVAHCHITGHSDMGMVALVDIFEK 519
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A8J6C9A0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C9A0_DIALT) HSP 1 Score: 256 bits (653), Expect = 3.230e-67 Identity = 261/839 (31.11%), Postives = 350/839 (41.72%), Query Frame = 1 Query: 1042 QPLDGEALTAFSRD--LTSPENRWSKDGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRAS-----------------LEGKVEAW------PNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGS----LPPEVEAMREVVMVLQETNIESGALRNYKAASEISGSKMPLYGKGEGGDGSKSDMLHF----VTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRD----DTK--------------EPGQKEKEA-------AEAGGAGGAPAAS-------SDIDM------------NSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCDGP-----------GAYRLVS----------SKGGAAGRGGGEED--GDEES--IMAYLGKNTDVFEG---TLAFLDVGGDQMDMELPTKSPTAMGENRLLQDLQQLPDNEVSRFVFEFNAAEKVSHLGQTYTWYGINGIQYNASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVE--LAEDEGEGGGARVACE------RTD-------PGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMMMNFEI 3198
+P G + A +R L PE R S+DG LRTTL VAP A + VRAYE SVPGPTL V+PGD L + + N L + + A RAS +G V PN T++HVHG+HVSP D+IY GP Y YE+P H GIFYYHPH GSS VQ GGM+GAI+V +P + +PP+ ++V+Q N+ +G +RN AS +GS +PL G G D H VTVNGQ +P + GE RLR+VH G+ND + V++VP + G D + EPG A A A AG P A+ +++D C LL LARDGV L PR Q RV+ +PGSRA+L VRC G G Y L + + G G G G+E G+ E+ + A++G +D+ TL + G + D P + G R A + S + Y+ + G+ VPL + + V+ +G + P + T G + + A + A G Q S W G+ + G + G E L + G R+ RTD G HPFHLH NHFQ +++ D+ VGDWRDTI++P PG+VT+RW ADDFTG ++AHCHIFGHSDTGM M+FEI
Sbjct: 75 EPWPGTRVRARARGEALVQPEVRRSRDGVLRTTLNVAPFHFAVPGFA--VTVRAYEGSVPGPTLLVRPGDVLAIEVDNALGTEAAEDADAARARSAPHARSRARASSQRSSASAPGHEYAQPGADGAVPRAFNSLHRPNSTSLHVHGMHVSPRPGADDIYTVVGPRSVRTYTYEIPRSHPVGIFYYHPHLHGSSGVQAHGGMAGAIVVAEPGDANSTDVPPDASLN---LLVVQTFNVAAGTVRNLAWASRAAGSWLPL-GLRTALVGGAGDADHVEGVAVTVNGQLEPRAALRAGEWTRLRLVHAGHNDLLLVTVVPVHSGGAASPRAPTDARPARVGRGPLAAGPAEPGADSAPADADADLAAAARAAGAFPLAAEREAALLAELDTIEAAGGLAAAPPRGCALLVLARDGVRLREPRTQS----RVLFSPGSRAELLVRCAGDAEGSGGEHGAYGEYELRADALPQQPPRHTAGAPNGAGAGKEATIGEAEAAILRAHVGSGSDMASARLLTLVAIPRHGTRGDAP-----PASAGRARXXXXXXXXXXXXXXXDTAAVRALD--SPIAPLYSRLDLRGVT---------VPL---DAHLDVHMLQGAAPIIRPTPPDAPPPVTRNSSAAVSTTATIATGWAQGGAKEGPAGKSEEHAHRSGAAGVPQPYS-WY--GMADREYDGSIMRRVALGAVEEWTLRNERALGAAVRLPLALPAEGARTDGLAALLAAGAPADTNHPFHLHVNHFQIIAIHAPAQPDGADALQADRAAAAAAA-----VDYEVGDWRDTITVPTPGSVTVRWRADDFTGVSMAHCHIFGHSDTGMSMDFEI 876
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A8K1CHK1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHK1_PYTOL) HSP 1 Score: 242 bits (617), Expect = 3.960e-64 Identity = 208/752 (27.66%), Postives = 296/752 (39.36%), Query Frame = 1 Query: 1060 ALTAFSRDLTSP---ENRWSKDGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGSLPPEVEAMREVVMVLQETNIESGALRNYKAASEISGSKMPL---------------------YGKGEGGD--------GSKSDMLHFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCDG--PGAYRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSPTAMGENRLLQDLQQLPDNEVSRFV-----FEFNAAEKVSHLGQTYTWYGINGIQYNASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVELAEDEGEGGGARVACERTDPGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMMMNFEI 3198
AL DL + E R S GEL TT+ V Q GP+ S R+YE S+PGP L ++PGD L ++LVN+L+ +V G PN TN+HVHG+HV P+G+ DN+ R PG +L +P +H G+F+YHPH+ GS +Q GGM G ++VED +LP + AM+ V+ LQE + G + + A+E S SK+ + + E + + + F VNG Y P + QP E +RLR ++ G + + ++ VPA C +A DG YLS PR + L+PG+RAD+ + C+ P S + A + + + +LG ++DVF+G LAF+ V G +M T P + DL+ L D++ ++ FEF KV G Y Y IN ++ V+R +PLG V+EWVI+NQ+ + G+ T HPFHLH N FQ +V S G EG D+ +GDWRD I++P PGNVTIR+ DF G VAHCHI GHSD GM+ +I
Sbjct: 121 ALNTLIEDLPALPELEVRRSVRGELNTTIHVREHQFQFGPI--SFWTRSYEGSIPGPMLSIQPGDTLNLHLVNELEQ-----NVPG--------------EWAPNTYHHPNTTNLHVHGMHVDPTGIADNVLRVVEPGKSLFTQIHVPANHPRGLFHYHPHYHGSVFLQMSGGMMGPLLVEDDAETLPKDYRAMKTHVLALQEFRFDGGIAADLRKAAEASRSKLDMNLAYTHHAVLDTHVRTLFPHVHRPSEAIEEIPMATSLAERPALSRFFVVNGAYLPRIDVQPNENVRLRFLNAGGSSTLQLA-VPA----------------------------------------CSFHLIANDGNYLSQPRPVK----LLFLSPGARADVVINCEANDPSDPHRESLRPLQAVQ--------DVGVNDFLGASSDVFQGVLAFVHVSGPSREMGPVTSVPPPPALYAGV-DLRTLSDDDRAKMDANPLHFEFTMGGKVKKDGFKYKNYFINHALFSLDNVLREMPLGVVQEWVIINQQD--------------------------------------------------------------------------------------------------------------ESGKATNKNHPFHLHTNAFQ----------------------IVDMSHG-EGVDYKIGDWRDVIAVPTPGNVTIRFRPVDFKGPVVAHCHILGHSDAGMVALVKI 664
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A5D6YCR1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCR1_9STRA) HSP 1 Score: 248 bits (633), Expect = 6.560e-63 Identity = 228/759 (30.04%), Postives = 305/759 (40.18%), Query Frame = 1 Query: 1057 EALTAFSRDLTSPENRWSKDGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVE---DPEGSLPPEVEAMREVVMVLQETNIESGALRNYKAASEISGSKMPL--------------YGKGEG--------------------GDGSKSDML-HFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCDGPGAYRLVSSKGGAAGRGGGE-----EDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDM----ELPTKSPTAMGENRLLQDLQQLPDNEVSRFVFEFN---AAEKVSHLGQTYTWYGINGIQYNASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHPSSSXXXXXXXXXXXXXXXTELREPIDSRGDVGSSASGSDGAAGAAANGEGQHRSRWRRRGLGSQLSKGPEVESGPSGGAVELAEDEGEGGGARVACERTDPGEVTYDGHPFHLHANHFQGAGXXXXXXXXXXXXXXXXXXXVVSSSWGDEGPDWNVGDWRDTISIPAPGNVTIRWSADDFTGEAVAHCHIFGHSDTGMM 3183
+ LT L PE R S +G L TTLRV PA GP+ S R+YE SVPGPTLRVKPGD L + LVN+L P+ G + PN TN+HVHG+HV P+GV DN+ R GPG + +P DH G+F+YHPHF G+ Q GGM+GA++V+ D +LPP AM + ++VLQE G + A +E + S++PL G G DGS + + TVNGQY P + QP E LR+V+ G V L+ + G C L A DG+YL+ PR ++LA GSRAD+ + C+ P A ++ GG + R E + + ++ +LG +DVF G +AF+ V G+ + M +LPT +P E L L ++ FEF V G +Y Y +NG ++ + R +PLG V+EWVIVN+R VG GEV HPFH+H N FQ VV+ S G EG ++ VGDWRD IS+P PGNVTIR+ DFTG +AHCH GHSD GM+
Sbjct: 1155 QQLTQQLAALRQPEERVSVNGVLNTTLRVRPAHFTDGPI--SFWTRSYEGSVPGPTLRVKPGDTLTIELVNELG-----PNTPG--------------NWAKNTLHSPNTTNLHVHGMHVDPTGVADNVARVVGPGARARTQIHVPRDHPRGLFHYHPHFHGAVFAQMGGGMAGALVVDPDADEAHALPPAYRAMAQQLLVLQEFRFSGGLGSSAVAVAEAARSRLPLRLQYTAKAALDAAVQGLYPGVHQTQPSIAIERDPALDKLFPDGSAGPPITDYFTVNGQYLPKIEVQPRENRLLRLVNAGG-----VCLLQLSVPG------------------------------------CTLTLTATDGIYLAVPRAVE----TLMLAAGSRADVVLTCE-PNAPAAAAA-GGLSER---EPLRPLQSVRDTALDGFLGTTSDVFAGVVAFVHVTGEPLQMAPVTQLPTPTPL-YDEAASLLTLSGADRAAMAPEPFEFEFTMGGPPVLKDGFSYKNYFVNGKAFDGTSS-RDLPLGVVQEWVIVNKRL-----------------------------------------VG---------------------------------------------------------------------GEVAKANHPFHMHTNAFQ----------------------VVAMSHG-EGAEYRVGDWRDVISVPTPGNVTIRFRPVDFTGVVLAHCHTLGHSDGGMI 1707
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: A0A7S1CLJ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLJ5_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.800e-55 Identity = 148/411 (36.01%), Postives = 201/411 (48.91%), Query Frame = 1 Query: 1114 DGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGSLPPEVEAMREVVMVLQETNIESGA----LRNYKAASEISGSKMPLYGKGEGGDGSKSDMLHFVTVNGQYQPVVRA-QPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCDGPGAYRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSP 2331
DG +RTTL VA A AGP S RAY VPGPT R+ GD + V LVNDL + D S+ G+ PNVTN+H HGLHVSP GD+++ R GPG A Y ELP H PG+ ++H H GS+++Q GG+ GAI+VED + PPE+ AMR++V+V+Q +++ + + AA ++GS M L E GD + + +F+TVNG +QP + PGE +RLR+V G+ M + + PG C + LA+DG+YL APR V APGSR D+AV C G Y+L +S DGD A+ EG +A ++VGG + M LPT P
Sbjct: 43 DGVVRTTLTVAAARWDAGPA--SFMTRAYNGDVPGPTFRLSAGDTMQVRLVNDLGPDDADYSMNEYGK--------------------PNVTNLHTHGLHVSPEAPGDDVFARVGPGMAQDYTIELPDSHAPGLHWFHAHVHGSTNLQVQGGLVGAIVVEDDAATAPPELLAMRDLVLVIQNVVLDASTAPDPIASIPAAEYLTGSAMSL--DIEYGDAAAA--RNFITVNGDHQPTLDGVAPGEWVRLRMVQAGHGPFMALHV---------------PG--------------------------CAMALLAKDGIYLDAPRDVPF----VTFAPGSRRDVAVMCAAAGTYQLEAST-----------DGDMGEAGAF-----GQLEGVVASIEVGGGAVSMSLPTTLP 366
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Match: D0NGN8_PHYIT (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=D0NGN8_PHYIT) HSP 1 Score: 207 bits (527), Expect = 1.970e-52 Identity = 159/552 (28.80%), Postives = 243/552 (44.02%), Query Frame = 1 Query: 1081 DLTSPENRWSKDGELRTTLRVAPAVTQAGPLAPSLNVRAYEESVPGPTLRVKPGDRLFVNLVNDLDLPEGDPSVAGAGEDGEGDGGIDRASLEGKVEAWPNVTNIHVHGLHVSPSGVGDNIYRRAGPGDALQYIYELPPDHYPGIFYYHPHFDGSSSVQTLGGMSGAIIVEDPEGSLPPEVEAMREV-VMVLQETNIESGALRNYKAASEISGSKMPLYGKGEGG----------------------------------DGSKSD-----MLHFVTVNGQYQPVVRAQPGEALRLRVVHGGNNDHMHVSLVPAAAAGLQRDDTKEPGQKEKEAAEAGGAGGAPAASSDIDMNSCKLLTLARDGVYLSAPRLQGGGDGRVVLAPGSRADLAVRCD-----GPGAYRLVSSKGGAAGRGGGEEDGDEESIMAYLGKNTDVFEGTLAFLDVGGDQMDMELPTKSPTAM---GENRLLQDLQQLPDNEVSR--FVFEFNAAEKVSHLGQTYTWYGINGIQYNASQVVRRVPLGSVEEWVIVNQRKGRGERVEACHP 2586
+L + E R S +GEL TT+ VA + GP+A RAYE+SVPGP L +KPGD L ++LVN+L P+VAG PN TN+H HG+HV P+G DN++R PG++ +P +H G+F+YHPHF GS +Q GGM G I+VED ++P E A+++ VMVLQE G + + A++ S S + + G D SK + + +VNG+Y P ++ +P E + LR++H G AS ++ + C ++ A DG+Y++ PR V+L PG+R D+ + C+ GP R + S + + ++G ++D++ G LAF+ V G+ +D L T P G + L +L + + F FEF + G Y Y IN ++ + + R +PLG V+EWVI+N+R G HP
Sbjct: 123 ELPALETRMSINGELNTTITVAEKLVDNGPIA--FYTRAYEDSVPGPMLVLKPGDVLNIHLVNNLG-----PNVAG--------------EWTANTMHEPNNTNLHFHGMHVDPTGTEDNVFRIVAPGESADTHLHVPLNHPRGLFHYHPHFHGSVFLQMGGGMVGPIVVEDDPATVPAEYAAIKQRHVMVLQEFKFTGGIMTSMVEAAKASRSTLDMQVMYTGKTKLDAQVRKLYPDVQETERPIRNAKLSKELLQETDSSKEKPQIPPIAQYFSVNGEYLPKIQVRPHENVLLRMLHAGGT-----------------------------------------ASLEVQVPGCSIMLAASDGLYMAKPRPME----TVILLPGARVDVVLNCEPATEVGPEILRPIQSV-------------KDPKLHGFMGNHSDLYSGVLAFIHVQGESLDEPLVTAVPPPSELYGPAKSLLELSAVDRAGMDPLPFEFEFTMGDPEMKDGFFYKPYYINHALFDGTSI-RTMPLGRVQEWVIINRRDESGAVTLKNHP 594 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig102.781.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig102.781.1 >prot_C-linearis_contig102.781.1 ID=prot_C-linearis_contig102.781.1|Name=mRNA_C-linearis_contig102.781.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=817bp MFTAVFSTAGGKYDDQGTLGSCRRAFCQNVIDHIGRARARFSGRAIRAKGback to top mRNA from alignment at C-linearis_contig102:238657..253860+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig102.781.1 ID=mRNA_C-linearis_contig102.781.1|Name=mRNA_C-linearis_contig102.781.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15204bp|location=Sequence derived from alignment at C-linearis_contig102:238657..253860+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig102:238657..253860+ >mRNA_C-linearis_contig102.781.1 ID=mRNA_C-linearis_contig102.781.1|Name=mRNA_C-linearis_contig102.781.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4902bp|location=Sequence derived from alignment at C-linearis_contig102:238657..253860+ (Chordaria linearis ClinC8C monoicous)back to top |